Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0038320 | 0.809242 | 2.084554e-50 | -8.615850e-47 |
| Msa0031340 | Msa0038320 | 0.814602 | 1.417223e-51 | -8.615850e-47 |
| Msa0038320 | Msa0084380 | 0.807977 | 3.883684e-50 | -8.615850e-47 |
| Msa0038320 | Msa0112750 | 0.805428 | 1.341515e-49 | -8.615850e-47 |
| Msa0038320 | Msa0157290 | 0.808818 | 2.569393e-50 | -8.615850e-47 |
| Msa0038320 | Msa0211150 | 0.800682 | 1.285035e-48 | -8.615850e-47 |
| Msa0038320 | Msa0212990 | 0.804275 | 2.336158e-49 | -8.615850e-47 |
| Msa0038320 | Msa0220580 | 0.801043 | 1.084717e-48 | -8.615850e-47 |
| Msa0038320 | Msa0258310 | 0.801682 | 8.022945e-49 | -8.615850e-47 |
| Msa0038320 | Msa0345970 | 0.813935 | 1.989822e-51 | -8.615850e-47 |
| Msa0038320 | Msa0367870 | 0.802700 | 4.953674e-49 | -8.615850e-47 |
| Msa0038320 | Msa0484780 | 0.805478 | 1.309658e-49 | -8.615850e-47 |
| Msa0038320 | Msa0512900 | 0.824350 | 8.465066e-54 | -8.615850e-47 |
| Msa0038320 | Msa0824660 | 0.801531 | 8.619063e-49 | -8.615850e-47 |
| Msa0038320 | Msa0832340 | 0.800232 | 1.587315e-48 | -8.615850e-47 |
| Msa0038320 | Msa0880140 | 0.807449 | 5.028201e-50 | -8.615850e-47 |
| Msa0038320 | Msa0961610 | 0.803927 | 2.759633e-49 | -8.615850e-47 |
| Msa0038320 | Msa0964310 | 0.802467 | 5.534202e-49 | -8.615850e-47 |
| Msa0038320 | Msa0972100 | 0.813954 | 1.970389e-51 | -8.615850e-47 |
| Msa0038320 | Msa0996680 | 0.806054 | 9.910709e-50 | -8.615850e-47 |
| Msa0038320 | Msa1031930 | 0.816678 | 4.885033e-52 | -8.615850e-47 |
| Msa0038320 | Msa1035960 | 0.806904 | 6.559328e-50 | -8.615850e-47 |
| Msa0038320 | Msa1075540 | 0.801117 | 1.047338e-48 | -8.615850e-47 |
| Msa0038320 | Msa1122520 | 0.801155 | 1.028772e-48 | -8.615850e-47 |
| Msa0038320 | Msa1137570 | 0.808748 | 2.658844e-50 | -8.615850e-47 |
| Msa0038320 | Msa1154280 | 0.806415 | 8.317724e-50 | -8.615850e-47 |
| Msa0038320 | Msa1284680 | 0.801649 | 8.149407e-49 | -8.615850e-47 |
| Msa0038320 | Msa1353980 | 0.802766 | 4.799993e-49 | -8.615850e-47 |
| Msa0038320 | Msa1463900 | 0.803293 | 3.736243e-49 | -8.615850e-47 |
| Msa0038320 | Msa1466540 | 0.810163 | 1.321521e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0038320 | MtrunA17_Chr1g0201801 | 95.794 | 214 | 9 | 0 | 1 | 214 | 1 | 214 | 4.78e-149 | 412 |
| Msa0038320 | MtrunA17_Chr6g0472121 | 59.184 | 98 | 34 | 3 | 50 | 144 | 9 | 103 | 1.17e-23 | 98.6 |
| Msa0038320 | MtrunA17_Chr6g0464341 | 56.566 | 99 | 37 | 3 | 50 | 145 | 36 | 131 | 1.41e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0038320 | AT1G76770.1 | 55.118 | 127 | 54 | 1 | 1 | 124 | 1 | 127 | 7.35e-41 | 139 |
| Msa0038320 | AT1G76780.3 | 51.181 | 127 | 59 | 1 | 1 | 124 | 1 | 127 | 2.05e-35 | 132 |
| Msa0038320 | AT1G76780.2 | 51.181 | 127 | 59 | 1 | 1 | 124 | 1 | 127 | 2.05e-35 | 132 |
Find 36 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGTCCACCTTTGGTTCT+TGG | 0.114619 | 1_1:+67742544 | Msa0038320:CDS |
| AATCCCTAATGGAGTTGTTT+TGG | 0.253932 | 1_1:+67742279 | Msa0038320:CDS |
| CTAGGACGTCTCTTCTTAAC+AGG | 0.266778 | 1_1:-67742508 | None:intergenic |
| AAGAAAGAGCTGAAAATAAA+AGG | 0.299279 | 1_1:+67742238 | Msa0038320:CDS |
| TTATCCAAAACAACTCCATT+AGG | 0.309228 | 1_1:-67742283 | None:intergenic |
| GACAGGTCCTGCTCTGTCTT+TGG | 0.343396 | 1_1:-67741710 | None:intergenic |
| TATCCAAAACAACTCCATTA+GGG | 0.362753 | 1_1:-67742282 | None:intergenic |
| ATTGCTATGGAGGTTGAGTT+AGG | 0.385137 | 1_1:+67741631 | None:intergenic |
| ATGGCAACCTTGTCCACCTT+TGG | 0.390972 | 1_1:+67742537 | Msa0038320:CDS |
| AAGAAGTTTAAAATCCCTAA+TGG | 0.416386 | 1_1:+67742268 | Msa0038320:CDS |
| TGTCCACCTTTGGTTCTTGG+AGG | 0.424444 | 1_1:+67742547 | Msa0038320:CDS |
| GGCAAACTGAAAATCAGAAA+TGG | 0.432210 | 1_1:-67741689 | None:intergenic |
| CAGTTTGCCAAAGACAGAGC+AGG | 0.497784 | 1_1:+67741703 | Msa0038320:CDS |
| AGAAGAAGTGAAGGAAGAAG+AGG | 0.509148 | 1_1:+67742399 | Msa0038320:CDS |
| GTTTCTTTAGATAAGAAGAC+AGG | 0.514312 | 1_1:-67741727 | None:intergenic |
| TAGCAAAAGGAGTGCTGAGT+GGG | 0.529464 | 1_1:+67742368 | Msa0038320:CDS |
| GACATCAACATTAACAAAGA+TGG | 0.531815 | 1_1:+67742157 | Msa0038320:CDS |
| AAAGGAGTGCTGAGTGGGGT+GGG | 0.541345 | 1_1:+67742373 | Msa0038320:CDS |
| CTGAAAATCAGAAATGGAAG+TGG | 0.544169 | 1_1:-67741683 | None:intergenic |
| AAGTGCAAGAAAAGAAGTAA+AGG | 0.549837 | 1_1:+67742453 | Msa0038320:CDS |
| GAAGAAGTGAAGGAAGAAGA+GGG | 0.550743 | 1_1:+67742400 | Msa0038320:CDS |
| CCAAGAACCAAAGGTGGACA+AGG | 0.550847 | 1_1:-67742544 | None:intergenic |
| TACAGATGATAAGAGTGAAG+AGG | 0.565214 | 1_1:+67742477 | Msa0038320:CDS |
| CAAAGCTAAGTATTACGAAG+AGG | 0.566739 | 1_1:+67742309 | Msa0038320:CDS |
| ACCTTTGAGATGTGCTGTGA+GGG | 0.582015 | 1_1:-67741764 | None:intergenic |
| GCTAAGTATTACGAAGAGGA+AGG | 0.582114 | 1_1:+67742313 | Msa0038320:CDS |
| ACCCTCACAGCACATCTCAA+AGG | 0.582279 | 1_1:+67741763 | Msa0038320:CDS |
| AAAAGGAGTGCTGAGTGGGG+TGG | 0.583010 | 1_1:+67742372 | Msa0038320:CDS |
| AAAGGTGGACAAGGTTGCCA+TGG | 0.584568 | 1_1:-67742535 | None:intergenic |
| GGTGGGAATAGAAGAAGTGA+AGG | 0.616063 | 1_1:+67742390 | Msa0038320:CDS |
| GTTGATCCTCCAAGAACCAA+AGG | 0.621557 | 1_1:-67742553 | None:intergenic |
| GATCCTCCAAGAACCAAAGG+TGG | 0.669806 | 1_1:-67742550 | None:intergenic |
| AGCAAAAGGAGTGCTGAGTG+GGG | 0.706883 | 1_1:+67742369 | Msa0038320:CDS |
| AACCTTTGAGATGTGCTGTG+AGG | 0.714535 | 1_1:-67741765 | None:intergenic |
| AGAGACGTCCTAGAAAACCA+TGG | 0.719572 | 1_1:+67742518 | Msa0038320:CDS |
| ATAGCAAAAGGAGTGCTGAG+TGG | 0.729591 | 1_1:+67742367 | Msa0038320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTAATTTGTTTTCAC+AGG | - | chr1_1:67741969-67741988 | None:intergenic | 15.0% |
| !!! | AAAATTTAATTTGTTTTCAC+AGG | - | chr1_1:67741969-67741988 | None:intergenic | 15.0% |
| ! | ATATGTTCATCATATCAACA+TGG | - | chr1_1:67742113-67742132 | None:intergenic | 25.0% |
| ! | AAGAAAGAGCTGAAAATAAA+AGG | + | chr1_1:67742238-67742257 | Msa0038320:CDS | 25.0% |
| !! | AAGAAGTTTAAAATCCCTAA+TGG | + | chr1_1:67742268-67742287 | Msa0038320:CDS | 25.0% |
| ! | ATATGTTCATCATATCAACA+TGG | - | chr1_1:67742113-67742132 | None:intergenic | 25.0% |
| ! | AAGAAAGAGCTGAAAATAAA+AGG | + | chr1_1:67742238-67742257 | Msa0038320:CDS | 25.0% |
| !! | AAGAAGTTTAAAATCCCTAA+TGG | + | chr1_1:67742268-67742287 | Msa0038320:CDS | 25.0% |
| GTTTCTTTAGATAAGAAGAC+AGG | - | chr1_1:67741730-67741749 | None:intergenic | 30.0% | |
| CGTCTTATGATATGTCTATA+AGG | + | chr1_1:67741907-67741926 | Msa0038320:intron | 30.0% | |
| CAACATGGTATCATTAACAT+AGG | - | chr1_1:67742098-67742117 | None:intergenic | 30.0% | |
| TTGATATGATGAACATATGC+AGG | + | chr1_1:67742115-67742134 | Msa0038320:intron | 30.0% | |
| GACATCAACATTAACAAAGA+TGG | + | chr1_1:67742157-67742176 | Msa0038320:CDS | 30.0% | |
| ! | ATTTTCAGCTCTTTCTTGAA+TGG | - | chr1_1:67742235-67742254 | None:intergenic | 30.0% |
| TATCCAAAACAACTCCATTA+GGG | - | chr1_1:67742285-67742304 | None:intergenic | 30.0% | |
| TTATCCAAAACAACTCCATT+AGG | - | chr1_1:67742286-67742305 | None:intergenic | 30.0% | |
| AAGTGCAAGAAAAGAAGTAA+AGG | + | chr1_1:67742453-67742472 | Msa0038320:CDS | 30.0% | |
| GTTTCTTTAGATAAGAAGAC+AGG | - | chr1_1:67741730-67741749 | None:intergenic | 30.0% | |
| CGTCTTATGATATGTCTATA+AGG | + | chr1_1:67741907-67741926 | Msa0038320:intron | 30.0% | |
| CAACATGGTATCATTAACAT+AGG | - | chr1_1:67742098-67742117 | None:intergenic | 30.0% | |
| TTGATATGATGAACATATGC+AGG | + | chr1_1:67742115-67742134 | Msa0038320:intron | 30.0% | |
| GACATCAACATTAACAAAGA+TGG | + | chr1_1:67742157-67742176 | Msa0038320:CDS | 30.0% | |
| ! | ATTTTCAGCTCTTTCTTGAA+TGG | - | chr1_1:67742235-67742254 | None:intergenic | 30.0% |
| TATCCAAAACAACTCCATTA+GGG | - | chr1_1:67742285-67742304 | None:intergenic | 30.0% | |
| TTATCCAAAACAACTCCATT+AGG | - | chr1_1:67742286-67742305 | None:intergenic | 30.0% | |
| AAGTGCAAGAAAAGAAGTAA+AGG | + | chr1_1:67742453-67742472 | Msa0038320:CDS | 30.0% | |
| CTGAAAATCAGAAATGGAAG+TGG | - | chr1_1:67741686-67741705 | None:intergenic | 35.0% | |
| GGCAAACTGAAAATCAGAAA+TGG | - | chr1_1:67741692-67741711 | None:intergenic | 35.0% | |
| ! | TTTTCACAGGCTATCATGAA+GGG | - | chr1_1:67741956-67741975 | None:intergenic | 35.0% |
| GGTACAAAAATTTCAGTGAG+TGG | + | chr1_1:67742178-67742197 | Msa0038320:CDS | 35.0% | |
| ! | AATCCCTAATGGAGTTGTTT+TGG | + | chr1_1:67742279-67742298 | Msa0038320:CDS | 35.0% |
| CAAAGCTAAGTATTACGAAG+AGG | + | chr1_1:67742309-67742328 | Msa0038320:CDS | 35.0% | |
| GAGAATAGTGATGCCAAAAA+CGG | + | chr1_1:67742342-67742361 | Msa0038320:CDS | 35.0% | |
| !!! | CCTTTTGCTATTTCCGTTTT+TGG | - | chr1_1:67742358-67742377 | None:intergenic | 35.0% |
| CCAAAAACGGAAATAGCAAA+AGG | + | chr1_1:67742355-67742374 | Msa0038320:CDS | 35.0% | |
| ! | TCTTTTCTTGCACTTTGTTC+TGG | - | chr1_1:67742448-67742467 | None:intergenic | 35.0% |
| TACAGATGATAAGAGTGAAG+AGG | + | chr1_1:67742477-67742496 | Msa0038320:CDS | 35.0% | |
| CTGAAAATCAGAAATGGAAG+TGG | - | chr1_1:67741686-67741705 | None:intergenic | 35.0% | |
| GGCAAACTGAAAATCAGAAA+TGG | - | chr1_1:67741692-67741711 | None:intergenic | 35.0% | |
| ! | TTTTCACAGGCTATCATGAA+GGG | - | chr1_1:67741956-67741975 | None:intergenic | 35.0% |
| GGTACAAAAATTTCAGTGAG+TGG | + | chr1_1:67742178-67742197 | Msa0038320:CDS | 35.0% | |
| ! | AATCCCTAATGGAGTTGTTT+TGG | + | chr1_1:67742279-67742298 | Msa0038320:CDS | 35.0% |
| CAAAGCTAAGTATTACGAAG+AGG | + | chr1_1:67742309-67742328 | Msa0038320:CDS | 35.0% | |
| GAGAATAGTGATGCCAAAAA+CGG | + | chr1_1:67742342-67742361 | Msa0038320:CDS | 35.0% | |
| !!! | CCTTTTGCTATTTCCGTTTT+TGG | - | chr1_1:67742358-67742377 | None:intergenic | 35.0% |
| CCAAAAACGGAAATAGCAAA+AGG | + | chr1_1:67742355-67742374 | Msa0038320:CDS | 35.0% | |
| ! | TCTTTTCTTGCACTTTGTTC+TGG | - | chr1_1:67742448-67742467 | None:intergenic | 35.0% |
| TACAGATGATAAGAGTGAAG+AGG | + | chr1_1:67742477-67742496 | Msa0038320:CDS | 35.0% | |
| ! | GTTTTCACAGGCTATCATGA+AGG | - | chr1_1:67741957-67741976 | None:intergenic | 40.0% |
| GCTAAGTATTACGAAGAGGA+AGG | + | chr1_1:67742313-67742332 | Msa0038320:CDS | 40.0% | |
| AGAAGAAGTGAAGGAAGAAG+AGG | + | chr1_1:67742399-67742418 | Msa0038320:CDS | 40.0% | |
| GAAGAAGTGAAGGAAGAAGA+GGG | + | chr1_1:67742400-67742419 | Msa0038320:CDS | 40.0% | |
| ! | GTTTTCACAGGCTATCATGA+AGG | - | chr1_1:67741957-67741976 | None:intergenic | 40.0% |
| GCTAAGTATTACGAAGAGGA+AGG | + | chr1_1:67742313-67742332 | Msa0038320:CDS | 40.0% | |
| AGAAGAAGTGAAGGAAGAAG+AGG | + | chr1_1:67742399-67742418 | Msa0038320:CDS | 40.0% | |
| GAAGAAGTGAAGGAAGAAGA+GGG | + | chr1_1:67742400-67742419 | Msa0038320:CDS | 40.0% | |
| !! | ACCTTTGAGATGTGCTGTGA+GGG | - | chr1_1:67741767-67741786 | None:intergenic | 45.0% |
| !! | AACCTTTGAGATGTGCTGTG+AGG | - | chr1_1:67741768-67741787 | None:intergenic | 45.0% |
| CCACTTGTAAGACTGTTCGA+CGG | + | chr1_1:67741872-67741891 | Msa0038320:intron | 45.0% | |
| !! | ATAGCAAAAGGAGTGCTGAG+TGG | + | chr1_1:67742367-67742386 | Msa0038320:CDS | 45.0% |
| !! | TAGCAAAAGGAGTGCTGAGT+GGG | + | chr1_1:67742368-67742387 | Msa0038320:CDS | 45.0% |
| GGTGGGAATAGAAGAAGTGA+AGG | + | chr1_1:67742390-67742409 | Msa0038320:CDS | 45.0% | |
| CTAGGACGTCTCTTCTTAAC+AGG | - | chr1_1:67742511-67742530 | None:intergenic | 45.0% | |
| AGAGACGTCCTAGAAAACCA+TGG | + | chr1_1:67742518-67742537 | Msa0038320:CDS | 45.0% | |
| ! | CAAGGTTGCCATGGTTTTCT+AGG | - | chr1_1:67742529-67742548 | None:intergenic | 45.0% |
| GTTGATCCTCCAAGAACCAA+AGG | - | chr1_1:67742556-67742575 | None:intergenic | 45.0% | |
| !! | ACCTTTGAGATGTGCTGTGA+GGG | - | chr1_1:67741767-67741786 | None:intergenic | 45.0% |
| !! | AACCTTTGAGATGTGCTGTG+AGG | - | chr1_1:67741768-67741787 | None:intergenic | 45.0% |
| CCACTTGTAAGACTGTTCGA+CGG | + | chr1_1:67741872-67741891 | Msa0038320:intron | 45.0% | |
| !! | ATAGCAAAAGGAGTGCTGAG+TGG | + | chr1_1:67742367-67742386 | Msa0038320:CDS | 45.0% |
| !! | TAGCAAAAGGAGTGCTGAGT+GGG | + | chr1_1:67742368-67742387 | Msa0038320:CDS | 45.0% |
| GGTGGGAATAGAAGAAGTGA+AGG | + | chr1_1:67742390-67742409 | Msa0038320:CDS | 45.0% | |
| CTAGGACGTCTCTTCTTAAC+AGG | - | chr1_1:67742511-67742530 | None:intergenic | 45.0% | |
| AGAGACGTCCTAGAAAACCA+TGG | + | chr1_1:67742518-67742537 | Msa0038320:CDS | 45.0% | |
| ! | CAAGGTTGCCATGGTTTTCT+AGG | - | chr1_1:67742529-67742548 | None:intergenic | 45.0% |
| GTTGATCCTCCAAGAACCAA+AGG | - | chr1_1:67742556-67742575 | None:intergenic | 45.0% | |
| CAGTTTGCCAAAGACAGAGC+AGG | + | chr1_1:67741703-67741722 | Msa0038320:CDS | 50.0% | |
| ACCCTCACAGCACATCTCAA+AGG | + | chr1_1:67741763-67741782 | Msa0038320:CDS | 50.0% | |
| CCGTCGAACAGTCTTACAAG+TGG | - | chr1_1:67741875-67741894 | None:intergenic | 50.0% | |
| !! | AGCAAAAGGAGTGCTGAGTG+GGG | + | chr1_1:67742369-67742388 | Msa0038320:CDS | 50.0% |
| AAAGGTGGACAAGGTTGCCA+TGG | - | chr1_1:67742538-67742557 | None:intergenic | 50.0% | |
| ATGGCAACCTTGTCCACCTT+TGG | + | chr1_1:67742537-67742556 | Msa0038320:CDS | 50.0% | |
| CCAAGAACCAAAGGTGGACA+AGG | - | chr1_1:67742547-67742566 | None:intergenic | 50.0% | |
| !! | CCTTGTCCACCTTTGGTTCT+TGG | + | chr1_1:67742544-67742563 | Msa0038320:CDS | 50.0% |
| !! | TGTCCACCTTTGGTTCTTGG+AGG | + | chr1_1:67742547-67742566 | Msa0038320:CDS | 50.0% |
| GATCCTCCAAGAACCAAAGG+TGG | - | chr1_1:67742553-67742572 | None:intergenic | 50.0% | |
| CAGTTTGCCAAAGACAGAGC+AGG | + | chr1_1:67741703-67741722 | Msa0038320:CDS | 50.0% | |
| ACCCTCACAGCACATCTCAA+AGG | + | chr1_1:67741763-67741782 | Msa0038320:CDS | 50.0% | |
| CCGTCGAACAGTCTTACAAG+TGG | - | chr1_1:67741875-67741894 | None:intergenic | 50.0% | |
| !! | AGCAAAAGGAGTGCTGAGTG+GGG | + | chr1_1:67742369-67742388 | Msa0038320:CDS | 50.0% |
| AAAGGTGGACAAGGTTGCCA+TGG | - | chr1_1:67742538-67742557 | None:intergenic | 50.0% | |
| ATGGCAACCTTGTCCACCTT+TGG | + | chr1_1:67742537-67742556 | Msa0038320:CDS | 50.0% | |
| CCAAGAACCAAAGGTGGACA+AGG | - | chr1_1:67742547-67742566 | None:intergenic | 50.0% | |
| !! | CCTTGTCCACCTTTGGTTCT+TGG | + | chr1_1:67742544-67742563 | Msa0038320:CDS | 50.0% |
| !! | TGTCCACCTTTGGTTCTTGG+AGG | + | chr1_1:67742547-67742566 | Msa0038320:CDS | 50.0% |
| GATCCTCCAAGAACCAAAGG+TGG | - | chr1_1:67742553-67742572 | None:intergenic | 50.0% | |
| GACAGGTCCTGCTCTGTCTT+TGG | - | chr1_1:67741713-67741732 | None:intergenic | 55.0% | |
| !! | AAAAGGAGTGCTGAGTGGGG+TGG | + | chr1_1:67742372-67742391 | Msa0038320:CDS | 55.0% |
| !! | AAAGGAGTGCTGAGTGGGGT+GGG | + | chr1_1:67742373-67742392 | Msa0038320:CDS | 55.0% |
| GACAGGTCCTGCTCTGTCTT+TGG | - | chr1_1:67741713-67741732 | None:intergenic | 55.0% | |
| !! | AAAAGGAGTGCTGAGTGGGG+TGG | + | chr1_1:67742372-67742391 | Msa0038320:CDS | 55.0% |
| !! | AAAGGAGTGCTGAGTGGGGT+GGG | + | chr1_1:67742373-67742392 | Msa0038320:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 67741637 | 67742633 | 67741637 | ID=Msa0038320;Name=Msa0038320 |
| chr1_1 | mRNA | 67741637 | 67742633 | 67741637 | ID=Msa0038320-mRNA-1;Parent=Msa0038320;Name=Msa0038320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0|1|1|1|2|0|214 |
| chr1_1 | exon | 67741637 | 67741784 | 67741637 | ID=Msa0038320-mRNA-1:exon:22007;Parent=Msa0038320-mRNA-1 |
| chr1_1 | exon | 67742137 | 67742633 | 67742137 | ID=Msa0038320-mRNA-1:exon:22008;Parent=Msa0038320-mRNA-1 |
| chr1_1 | CDS | 67741637 | 67741784 | 67741637 | ID=Msa0038320-mRNA-1:cds;Parent=Msa0038320-mRNA-1 |
| chr1_1 | CDS | 67742137 | 67742633 | 67742137 | ID=Msa0038320-mRNA-1:cds;Parent=Msa0038320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
