Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413690 | sp|Q9LRR6|CID9_ARATH | 71.080 | 287 | 77 | 1 | 17 | 297 | 39 | 325 | 7.05e-151 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413690 | A0A072V9E0 | 99.664 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 0.0 | 615 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000560 | Msa1413690 | 0.820701 | 5.968013e-53 | -8.615850e-47 |
| Msa0008110 | Msa1413690 | 0.806848 | 6.737951e-50 | -8.615850e-47 |
| Msa0018160 | Msa1413690 | 0.812633 | 3.843187e-51 | -8.615850e-47 |
| Msa0028420 | Msa1413690 | 0.827287 | 1.700521e-54 | -8.615850e-47 |
| Msa0036870 | Msa1413690 | 0.804001 | 2.663808e-49 | -8.615850e-47 |
| Msa0043230 | Msa1413690 | 0.806491 | 8.017834e-50 | -8.615850e-47 |
| Msa0047030 | Msa1413690 | 0.802192 | 6.303469e-49 | -8.615850e-47 |
| Msa0054690 | Msa1413690 | 0.805303 | 1.424557e-49 | -8.615850e-47 |
| Msa0088040 | Msa1413690 | 0.818573 | 1.827213e-52 | -8.615850e-47 |
| Msa0090400 | Msa1413690 | 0.817627 | 2.989772e-52 | -8.615850e-47 |
| Msa1358220 | Msa1413690 | 0.858502 | 7.884411e-63 | -8.615850e-47 |
| Msa1362150 | Msa1413690 | -0.803201 | 3.903012e-49 | -8.615850e-47 |
| Msa1363740 | Msa1413690 | 0.824796 | 6.646095e-54 | -8.615850e-47 |
| Msa1372230 | Msa1413690 | 0.812120 | 4.974812e-51 | -8.615850e-47 |
| Msa1413690 | Msa1429930 | 0.800031 | 1.743993e-48 | -8.615850e-47 |
| Msa1413690 | Msa1454140 | 0.819437 | 1.162192e-52 | -8.615850e-47 |
| Msa0604540 | Msa1413690 | 0.806150 | 9.460511e-50 | -8.615850e-47 |
| Msa0615710 | Msa1413690 | 0.830301 | 3.172522e-55 | -8.615850e-47 |
| Msa0626450 | Msa1413690 | 0.808699 | 2.724669e-50 | -8.615850e-47 |
| Msa0626490 | Msa1413690 | 0.808618 | 2.834876e-50 | -8.615850e-47 |
| Msa0631170 | Msa1413690 | 0.806898 | 6.576631e-50 | -8.615850e-47 |
| Msa0661150 | Msa1413690 | 0.804548 | 2.049426e-49 | -8.615850e-47 |
| Msa0664600 | Msa1413690 | 0.801555 | 8.520592e-49 | -8.615850e-47 |
| Msa0665620 | Msa1413690 | 0.822537 | 2.246572e-53 | -8.615850e-47 |
| Msa0683570 | Msa1413690 | 0.810917 | 9.080568e-51 | -8.615850e-47 |
| Msa0689230 | Msa1413690 | 0.854693 | 1.038473e-61 | -8.615850e-47 |
| Msa0689520 | Msa1413690 | 0.828706 | 7.743647e-55 | -8.615850e-47 |
| Msa0700460 | Msa1413690 | 0.839286 | 1.735062e-57 | -8.615850e-47 |
| Msa0710800 | Msa1413690 | 0.809675 | 1.682830e-50 | -8.615850e-47 |
| Msa0716690 | Msa1413690 | 0.809101 | 2.234692e-50 | -8.615850e-47 |
| Msa0730430 | Msa1413690 | 0.804596 | 2.002689e-49 | -8.615850e-47 |
| Msa0745700 | Msa1413690 | -0.814474 | 1.512297e-51 | -8.615850e-47 |
| Msa0753180 | Msa1413690 | 0.840299 | 9.453408e-58 | -8.615850e-47 |
| Msa0756490 | Msa1413690 | 0.824907 | 6.258721e-54 | -8.615850e-47 |
| Msa0765840 | Msa1413690 | 0.830509 | 2.822116e-55 | -8.615850e-47 |
| Msa0770720 | Msa1413690 | 0.821110 | 4.804655e-53 | -8.615850e-47 |
| Msa0784200 | Msa1413690 | 0.803763 | 2.984747e-49 | -8.615850e-47 |
| Msa0806790 | Msa1413690 | 0.812633 | 3.842920e-51 | -8.615850e-47 |
| Msa0818310 | Msa1413690 | 0.814959 | 1.180940e-51 | -8.615850e-47 |
| Msa0134500 | Msa1413690 | 0.819190 | 1.322495e-52 | -8.615850e-47 |
| Msa0137880 | Msa1413690 | 0.811644 | 6.313816e-51 | -8.615850e-47 |
| Msa0146040 | Msa1413690 | 0.806091 | 9.732583e-50 | -8.615850e-47 |
| Msa0149370 | Msa1413690 | 0.809666 | 1.690340e-50 | -8.615850e-47 |
| Msa0168500 | Msa1413690 | 0.817057 | 4.016580e-52 | -8.615850e-47 |
| Msa0182320 | Msa1413690 | 0.815857 | 7.455475e-52 | -8.615850e-47 |
| Msa0229230 | Msa1413690 | 0.836478 | 9.138649e-57 | -8.615850e-47 |
| Msa0231200 | Msa1413690 | 0.811837 | 5.732770e-51 | -8.615850e-47 |
| Msa1225700 | Msa1413690 | 0.814399 | 1.571621e-51 | -8.615850e-47 |
| Msa1240770 | Msa1413690 | 0.820001 | 8.637789e-53 | -8.615850e-47 |
| Msa1271990 | Msa1413690 | 0.806515 | 7.925482e-50 | -8.615850e-47 |
| Msa1279380 | Msa1413690 | 0.811686 | 6.183706e-51 | -8.615850e-47 |
| Msa1282260 | Msa1413690 | 0.844111 | 9.256203e-59 | -8.615850e-47 |
| Msa1321340 | Msa1413690 | 0.829108 | 6.189755e-55 | -8.615850e-47 |
| Msa0369810 | Msa1413690 | 0.832464 | 9.311939e-56 | -8.615850e-47 |
| Msa0415600 | Msa1413690 | 0.812829 | 3.480925e-51 | -8.615850e-47 |
| Msa0419700 | Msa1413690 | 0.815556 | 8.700708e-52 | -8.615850e-47 |
| Msa0428150 | Msa1413690 | 0.825602 | 4.286981e-54 | -8.615850e-47 |
| Msa0435210 | Msa1413690 | 0.800657 | 1.300467e-48 | -8.615850e-47 |
| Msa0442830 | Msa1413690 | 0.842305 | 2.805067e-58 | -8.615850e-47 |
| Msa0462500 | Msa1413690 | 0.830787 | 2.412351e-55 | -8.615850e-47 |
| Msa0474520 | Msa1413690 | 0.804610 | 1.988567e-49 | -8.615850e-47 |
| Msa0979730 | Msa1413690 | 0.821558 | 3.788705e-53 | -8.615850e-47 |
| Msa1003800 | Msa1413690 | 0.810599 | 1.063906e-50 | -8.615850e-47 |
| Msa1018690 | Msa1413690 | 0.838407 | 2.929306e-57 | -8.615850e-47 |
| Msa1020670 | Msa1413690 | 0.852750 | 3.762150e-61 | -8.615850e-47 |
| Msa1042160 | Msa1413690 | 0.804982 | 1.662702e-49 | -8.615850e-47 |
| Msa1042190 | Msa1413690 | 0.802065 | 6.696379e-49 | -8.615850e-47 |
| Msa1044680 | Msa1413690 | 0.810929 | 9.028214e-51 | -8.615850e-47 |
| Msa1045140 | Msa1413690 | 0.843879 | 1.068255e-58 | -8.615850e-47 |
| Msa1074370 | Msa1413690 | 0.823195 | 1.578767e-53 | -8.615850e-47 |
| Msa1077570 | Msa1413690 | 0.804933 | 1.702962e-49 | -8.615850e-47 |
| Msa1084960 | Msa1413690 | 0.810131 | 1.342803e-50 | -8.615850e-47 |
| Msa1096970 | Msa1413690 | 0.836555 | 8.736592e-57 | -8.615850e-47 |
| Msa1105640 | Msa1413690 | 0.801781 | 7.656361e-49 | -8.615850e-47 |
| Msa0255090 | Msa1413690 | 0.827790 | 1.287465e-54 | -8.615850e-47 |
| Msa0259380 | Msa1413690 | 0.828450 | 8.930943e-55 | -8.615850e-47 |
| Msa0267110 | Msa1413690 | 0.812189 | 4.806006e-51 | -8.615850e-47 |
| Msa0292330 | Msa1413690 | 0.990738 | 4.415971e-184 | -8.615850e-47 |
| Msa0292400 | Msa1413690 | 0.816244 | 6.111107e-52 | -8.615850e-47 |
| Msa0297740 | Msa1413690 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa0323270 | Msa1413690 | 0.813087 | 3.057350e-51 | -8.615850e-47 |
| Msa0349710 | Msa1413690 | 0.833342 | 5.634008e-56 | -8.615850e-47 |
| Msa1111090 | Msa1413690 | 0.801546 | 8.556126e-49 | -8.615850e-47 |
| Msa1130280 | Msa1413690 | 0.815129 | 1.082655e-51 | -8.615850e-47 |
| Msa1140210 | Msa1413690 | 0.843527 | 1.326490e-58 | -8.615850e-47 |
| Msa1167470 | Msa1413690 | 0.804214 | 2.404926e-49 | -8.615850e-47 |
| Msa1209460 | Msa1413690 | 0.804596 | 2.002632e-49 | -8.615850e-47 |
| Msa1216110 | Msa1413690 | 0.807199 | 5.680510e-50 | -8.615850e-47 |
| Msa0483910 | Msa1413690 | 0.813351 | 2.674765e-51 | -8.615850e-47 |
| Msa0511750 | Msa1413690 | 0.804438 | 2.160346e-49 | -8.615850e-47 |
| Msa0520890 | Msa1413690 | 0.872175 | 3.891273e-67 | -8.615850e-47 |
| Msa0526420 | Msa1413690 | 0.805239 | 1.469510e-49 | -8.615850e-47 |
| Msa0530780 | Msa1413690 | 0.834180 | 3.479264e-56 | -8.615850e-47 |
| Msa0532070 | Msa1413690 | 0.807622 | 4.620561e-50 | -8.615850e-47 |
| Msa0563940 | Msa1413690 | 0.803327 | 3.676372e-49 | -8.615850e-47 |
| Msa0587620 | Msa1413690 | 0.818721 | 1.691002e-52 | -8.615850e-47 |
| Msa0845440 | Msa1413690 | 0.842577 | 2.375255e-58 | -8.615850e-47 |
| Msa0945110 | Msa1413690 | 0.839652 | 1.393855e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413690 | MtrunA17_Chr2g0312971 | 99.664 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 0.0 | 615 |
| Msa1413690 | MtrunA17_Chr3g0127761 | 65.169 | 267 | 89 | 3 | 28 | 291 | 105 | 370 | 2.55e-124 | 360 |
| Msa1413690 | MtrunA17_Chr3g0127771 | 64.388 | 278 | 87 | 3 | 28 | 294 | 104 | 380 | 9.88e-122 | 353 |
| Msa1413690 | MtrunA17_Chr3g0134141 | 29.310 | 174 | 105 | 6 | 114 | 282 | 25 | 185 | 4.51e-13 | 69.3 |
| Msa1413690 | MtrunA17_Chr4g0044541 | 28.652 | 178 | 109 | 6 | 111 | 283 | 32 | 196 | 1.55e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1413690 | AT3G14450.1 | 71.080 | 287 | 77 | 1 | 17 | 297 | 39 | 325 | 7.16e-152 | 428 |
| Msa1413690 | AT1G53650.2 | 69.643 | 280 | 69 | 5 | 17 | 294 | 38 | 303 | 7.80e-142 | 402 |
| Msa1413690 | AT1G53650.1 | 68.440 | 282 | 75 | 4 | 17 | 294 | 38 | 309 | 2.04e-133 | 381 |
| Msa1413690 | AT1G32790.1 | 63.971 | 272 | 93 | 1 | 28 | 294 | 83 | 354 | 4.19e-123 | 356 |
| Msa1413690 | AT3G49390.2 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.83e-120 | 348 |
| Msa1413690 | AT3G49390.3 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.83e-120 | 348 |
| Msa1413690 | AT3G49390.1 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.83e-120 | 348 |
| Msa1413690 | AT4G10610.1 | 63.941 | 269 | 86 | 2 | 28 | 291 | 66 | 328 | 2.70e-119 | 346 |
| Msa1413690 | AT1G32790.2 | 62.692 | 260 | 92 | 1 | 28 | 282 | 83 | 342 | 2.07e-114 | 336 |
| Msa1413690 | AT1G32790.2 | 41.975 | 81 | 46 | 1 | 210 | 290 | 173 | 252 | 2.43e-14 | 73.2 |
| Msa1413690 | AT4G10610.2 | 62.791 | 258 | 85 | 2 | 28 | 280 | 66 | 317 | 2.90e-112 | 328 |
| Msa1413690 | AT4G10610.2 | 38.824 | 85 | 51 | 1 | 206 | 290 | 146 | 229 | 6.35e-12 | 65.5 |
| Msa1413690 | AT5G24440.1 | 52.837 | 282 | 120 | 2 | 17 | 289 | 36 | 313 | 2.49e-99 | 295 |
| Msa1413690 | AT5G24440.1 | 41.860 | 86 | 49 | 1 | 205 | 290 | 132 | 216 | 8.56e-14 | 71.2 |
Find 104 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCTCTAACTTAACTTTCT+AGG | 0.166323 | tig0024052:+18196 | Msa1413690:three_prime_UTR |
| ATTCTCTTCATTTCCATTTC+CGG | 0.182647 | tig0024052:+12310 | Msa1413690:five_prime_UTR |
| AGATGAGAGAGGAGAGAGTT+TGG | 0.192166 | tig0024052:-12247 | None:intergenic |
| GTTTCAGTTACTTGGTTATT+TGG | 0.204934 | tig0024052:+18273 | Msa1413690:three_prime_UTR |
| AAATGGAAATGAAGAGAATT+AGG | 0.215402 | tig0024052:-12306 | None:intergenic |
| AATCATACCCTTCGATTGTT+TGG | 0.222316 | tig0024052:-12856 | None:intergenic |
| CTGAATTCAGATTCAGCTTT+TGG | 0.224207 | tig0024052:-12670 | None:intergenic |
| TTAATAATATACTAAGAAAT+TGG | 0.229031 | tig0024052:-12356 | None:intergenic |
| TTAGAGCGCAGAACATTTAA+AGG | 0.234169 | tig0024052:-18182 | None:intergenic |
| GGTTACGCGCTTGAGGCTTT+TGG | 0.235319 | tig0024052:+17005 | Msa1413690:intron |
| TGAAATTTATATGATGAAAA+TGG | 0.243391 | tig0024052:-12539 | None:intergenic |
| TTGTCCACAATTGGTGAATA+AGG | 0.247931 | tig0024052:-14046 | None:intergenic |
| TTCTCTTCATTTCCATTTCC+GGG | 0.280238 | tig0024052:+12311 | Msa1413690:five_prime_UTR |
| AAACTGTAGCGGCATGCTTT+TGG | 0.294414 | tig0024052:+17835 | Msa1413690:CDS |
| GTTTGGAATAACAAAGGTTT+TGG | 0.298365 | tig0024052:-12230 | None:intergenic |
| AATCATGCCTTTCACCAGTT+TGG | 0.305370 | tig0024052:+18306 | Msa1413690:three_prime_UTR |
| CGTTCAACCTTCTCCTCCCT+TGG | 0.306807 | tig0024052:-13817 | None:intergenic |
| GCTTAGTGTTGACCAGAAAA+TGG | 0.311863 | tig0024052:-12813 | None:intergenic |
| TTGTACAAATATTGACAAAA+AGG | 0.314486 | tig0024052:+16560 | Msa1413690:CDS |
| TTCAGCTGATGCCAACAAAA+TGG | 0.330118 | tig0024052:+12639 | Msa1413690:CDS |
| ATCATACCCTTCGATTGTTT+GGG | 0.345576 | tig0024052:-12855 | None:intergenic |
| AATGGAAATGAAGAGAATTA+GGG | 0.376450 | tig0024052:-12305 | None:intergenic |
| GGCCTCACTGGAGTCTTTGA+AGG | 0.384362 | tig0024052:-17982 | None:intergenic |
| CGAGCAACCCTTGGCCTCAC+TGG | 0.390725 | tig0024052:-17994 | None:intergenic |
| GTAACTTACTTGTCCACAAT+TGG | 0.394700 | tig0024052:-14055 | None:intergenic |
| GTTATTTAGTTTCAGTTACT+TGG | 0.402397 | tig0024052:+18265 | Msa1413690:three_prime_UTR |
| AACCTTGGTGGTACTGTGCT+TGG | 0.416008 | tig0024052:+16283 | Msa1413690:CDS |
| CTTTCCAGTTGAGACTTGTA+TGG | 0.420211 | tig0024052:+18079 | Msa1413690:three_prime_UTR |
| ATGAAAATGGAAAGAGAAAA+CGG | 0.420392 | tig0024052:-12526 | None:intergenic |
| AAATAGTTTAAGACCAAGAC+TGG | 0.428164 | tig0024052:-18223 | None:intergenic |
| ATATTACATTGACCCGGAAA+TGG | 0.429552 | tig0024052:-12323 | None:intergenic |
| AATGCGGATCACCACAAATT+CGG | 0.432023 | tig0024052:-16067 | None:intergenic |
| CTTTCTAGGTACCCCAGTCT+TGG | 0.438937 | tig0024052:+18210 | Msa1413690:three_prime_UTR |
| TTTAATTTATTTATATATCT+GGG | 0.450356 | tig0024052:+12471 | Msa1413690:five_prime_UTR |
| ATGGTGTTAAATATCCAAAC+TGG | 0.451878 | tig0024052:-18320 | None:intergenic |
| GTTCAACCTTCTCCTCCCTT+GGG | 0.452495 | tig0024052:-13816 | None:intergenic |
| CTAAATATCCTCTCAAGTCT+TGG | 0.453675 | tig0024052:-18052 | None:intergenic |
| TGACGGCCATGATCATGATT+AGG | 0.454312 | tig0024052:-12766 | None:intergenic |
| GACACAAAGATGAAAATAAC+CGG | 0.458794 | tig0024052:-18129 | None:intergenic |
| ATTTGTACAATAGACAGTTC+TGG | 0.459054 | tig0024052:-16547 | None:intergenic |
| TCTTCCATACAAGTCTCAAC+TGG | 0.460888 | tig0024052:-18083 | None:intergenic |
| GTTCACAAAGCTGAATCCTT+TGG | 0.463673 | tig0024052:+12714 | Msa1413690:CDS |
| GAGAGAGTTTGGAATAACAA+AGG | 0.464902 | tig0024052:-12236 | None:intergenic |
| ATAATGGTACCAAACCTGAT+AGG | 0.472253 | tig0024052:-17866 | None:intergenic |
| GTCATTGATTGCCGAATTTG+TGG | 0.473392 | tig0024052:+16056 | Msa1413690:CDS |
| CCGATCGGTTAACGCGATAC+AGG | 0.479639 | tig0024052:-18018 | None:intergenic |
| TGAATCCTACATTCCTCCCC+AGG | 0.485315 | tig0024052:+16353 | Msa1413690:CDS |
| TTCGAAGGAAGGACCCTCAC+TGG | 0.492340 | tig0024052:-16313 | None:intergenic |
| CAAAGACTCCAGTGAGGCCA+AGG | 0.492377 | tig0024052:+17986 | Msa1413690:CDS |
| AGTTGAGACTTGTATGGAAG+AGG | 0.511196 | tig0024052:+18085 | Msa1413690:three_prime_UTR |
| GTGTTGACCAGAAAATGGTT+AGG | 0.517283 | tig0024052:-12808 | None:intergenic |
| CATACCCTGGGGAGGAATGT+AGG | 0.517978 | tig0024052:-16358 | None:intergenic |
| GGGAGGAATGTAGGATTCAC+AGG | 0.522132 | tig0024052:-16349 | None:intergenic |
| TATTCTCCTAATCATGATCA+TGG | 0.524419 | tig0024052:+12760 | Msa1413690:CDS |
| ATATCCTCTCAAGTCTTGGT+TGG | 0.524693 | tig0024052:-18048 | None:intergenic |
| GCAAGGGCAGCTTTAAACCT+TGG | 0.527689 | tig0024052:+16268 | Msa1413690:CDS |
| GCAGCCTTATTCACCAATTG+TGG | 0.527712 | tig0024052:+14042 | Msa1413690:CDS |
| TATGCAGTCGGATGATGAGC+GGG | 0.530361 | tig0024052:+16515 | Msa1413690:intron |
| TGATGAGATTAAACCCTTGA+CGG | 0.534141 | tig0024052:-12783 | None:intergenic |
| AAAACCACACAACACAAGGA+AGG | 0.535689 | tig0024052:+12182 | Msa1413690:five_prime_UTR |
| AAACCACACAACACAAGGAA+GGG | 0.538048 | tig0024052:+12183 | Msa1413690:five_prime_UTR |
| GAGAAAGAAAGAGATGAGAG+AGG | 0.539765 | tig0024052:-12258 | None:intergenic |
| ATCATGATCATGGCCGTCAA+GGG | 0.543640 | tig0024052:+12770 | Msa1413690:CDS |
| TTTCTTGGTTTAGGTTACTG+AGG | 0.557417 | tig0024052:+14011 | Msa1413690:intron |
| TTTCACAGGTTACGCGCTTG+AGG | 0.557575 | tig0024052:+16998 | Msa1413690:intron |
| CCTGTATCGCGTTAACCGAT+CGG | 0.562095 | tig0024052:+18018 | Msa1413690:exon |
| GATACAGGACGAGCAACCCT+TGG | 0.563628 | tig0024052:-18003 | None:intergenic |
| TAAATATCCAAACTGGTGAA+AGG | 0.567685 | tig0024052:-18313 | None:intergenic |
| AAAGCTGAATCCTTTGGCTA+AGG | 0.568332 | tig0024052:+12720 | Msa1413690:CDS |
| TCATGTCAACAGATGGTGCA+AGG | 0.569752 | tig0024052:+16251 | Msa1413690:intron |
| ATAATAACCCAAACAATCGA+AGG | 0.576301 | tig0024052:+12848 | Msa1413690:CDS |
| TGATTAGGAGAATAAGATGA+AGG | 0.576404 | tig0024052:-12751 | None:intergenic |
| GTTGAACGGAAGATCGCTAA+AGG | 0.577137 | tig0024052:+13832 | Msa1413690:CDS |
| TTTAACTTACACTGTCTCGT+TGG | 0.579243 | tig0024052:-12206 | None:intergenic |
| GGGTTATTATCATTAGCAGA+AGG | 0.581158 | tig0024052:-12835 | None:intergenic |
| CAATTCGAGTTGAATGCACC+TGG | 0.583914 | tig0024052:-17032 | None:intergenic |
| AACTTCTTTGAATCATCATG+TGG | 0.584423 | tig0024052:+16883 | Msa1413690:CDS |
| AGGAAAATATTACATTGACC+CGG | 0.587581 | tig0024052:-12329 | None:intergenic |
| TAGGCTTTAATTCTCTACCA+TGG | 0.588186 | tig0024052:+12594 | Msa1413690:exon |
| AATCATGATCATGGCCGTCA+AGG | 0.590810 | tig0024052:+12769 | Msa1413690:CDS |
| AGCAGTAACAACAGTTGCCA+TGG | 0.591951 | tig0024052:-12611 | None:intergenic |
| TGGTTTAGGTTACTGAGGAG+CGG | 0.592921 | tig0024052:+14016 | Msa1413690:intron |
| TGGCCCTTCCTTGTGTTGTG+TGG | 0.596526 | tig0024052:-12186 | None:intergenic |
| GGAATGTAGGATTCACAGGA+AGG | 0.618003 | tig0024052:-16345 | None:intergenic |
| TTGGTTGGACAATGTCCGAT+CGG | 0.620152 | tig0024052:-18033 | None:intergenic |
| AGGGCAGCTTTAAACCTTGG+TGG | 0.621096 | tig0024052:+16271 | Msa1413690:CDS |
| AATAGTTTAAGACCAAGACT+GGG | 0.622086 | tig0024052:-18222 | None:intergenic |
| CTTTGAATCATCATGTGGCG+AGG | 0.622886 | tig0024052:+16888 | Msa1413690:CDS |
| CATGTCAACAGATGGTGCAA+GGG | 0.627275 | tig0024052:+16252 | Msa1413690:intron |
| GCTTGGATACTATCCAGTGA+GGG | 0.628896 | tig0024052:+16300 | Msa1413690:CDS |
| AAAGACTCCAGTGAGGCCAA+GGG | 0.631851 | tig0024052:+17987 | Msa1413690:CDS |
| TTGTCCAACCAAGACTTGAG+AGG | 0.636876 | tig0024052:+18044 | Msa1413690:three_prime_UTR |
| AAAATATTCATACCCTGGGG+AGG | 0.643159 | tig0024052:-16366 | None:intergenic |
| TAATAACCCAAACAATCGAA+GGG | 0.646031 | tig0024052:+12849 | Msa1413690:CDS |
| ATATGCAGTCGGATGATGAG+CGG | 0.652163 | tig0024052:+16514 | Msa1413690:intron |
| GCTACAGTTTAGTGCAACAA+TGG | 0.660726 | tig0024052:-17822 | None:intergenic |
| GCAAAGCGAAGAACTGAATG+CGG | 0.663672 | tig0024052:-16083 | None:intergenic |
| CAAGGGAGGAGAAGGTTGAA+CGG | 0.663891 | tig0024052:+13818 | Msa1413690:CDS |
| GAATCCTACATTCCTCCCCA+GGG | 0.668990 | tig0024052:+16354 | Msa1413690:CDS |
| ATTGTTGCACTAAACTGTAG+CGG | 0.677875 | tig0024052:+17824 | Msa1413690:CDS |
| TGCTTGGATACTATCCAGTG+AGG | 0.696812 | tig0024052:+16299 | Msa1413690:CDS |
| ATCCAAGCACAGTACCACCA+AGG | 0.728153 | tig0024052:-16285 | None:intergenic |
| ATAGTTTAAGACCAAGACTG+GGG | 0.745112 | tig0024052:-18221 | None:intergenic |
| GTCCTTCAAAGACTCCAGTG+AGG | 0.760009 | tig0024052:+17980 | Msa1413690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAATATACTAAGAAAT+TGG | - | tig0024052:12359-12378 | None:intergenic | 10.0% |
| !!! | TTTTGATTTTTTTTTTGTTT+TGG | + | tig0024052:13026-13045 | Msa1413690:intron | 10.0% |
| !! | AAAATAGTTTAAAAAAATGT+TGG | - | tig0024052:13513-13532 | None:intergenic | 10.0% |
| !!! | GTTTTTTGAATTTTTTTTTT+TGG | + | tig0024052:14602-14621 | Msa1413690:intron | 10.0% |
| !!! | ATATTAAATTACTTTTTTGA+GGG | + | tig0024052:14774-14793 | Msa1413690:intron | 10.0% |
| !!! | TTTTTTTTTCTTTTTTTATG+GGG | - | tig0024052:14879-14898 | None:intergenic | 10.0% |
| !! | TTATAATTATTTAAATATGG+CGG | - | tig0024052:16009-16028 | None:intergenic | 10.0% |
| !!! | ACATAAAATCAAAAATATTT+TGG | + | tig0024052:16424-16443 | Msa1413690:intron | 10.0% |
| !!! | TATATTGTAACATATATTTT+TGG | + | tig0024052:16621-16640 | Msa1413690:intron | 10.0% |
| !!! | ATGAAATGATTATTTTATTA+TGG | - | tig0024052:16919-16938 | None:intergenic | 10.0% |
| !!! | CTTTAAAATATTTACAAAAT+AGG | - | tig0024052:17684-17703 | None:intergenic | 10.0% |
| !! | AAAAATGTAGAATTTACATA+AGG | - | tig0024052:12454-12473 | None:intergenic | 15.0% |
| !! | TGAAATTTATATGATGAAAA+TGG | - | tig0024052:12542-12561 | None:intergenic | 15.0% |
| !! | AAAAATAACAATCAAAATGA+GGG | - | tig0024052:12896-12915 | None:intergenic | 15.0% |
| !! | AAAAAATAACAATCAAAATG+AGG | - | tig0024052:12897-12916 | None:intergenic | 15.0% |
| !!! | GATATTAAATTACTTTTTTG+AGG | + | tig0024052:14773-14792 | Msa1413690:intron | 15.0% |
| !!! | TATTAAATTACTTTTTTGAG+GGG | + | tig0024052:14775-14794 | Msa1413690:intron | 15.0% |
| !! | AGTAATGAAATATGATTTAT+CGG | - | tig0024052:15002-15021 | None:intergenic | 15.0% |
| !! | CAATAAATGCATAAAATATT+AGG | - | tig0024052:15911-15930 | None:intergenic | 15.0% |
| !!! | CTAATATTTTATGCATTTAT+TGG | + | tig0024052:15909-15928 | Msa1413690:intron | 15.0% |
| !!! | TAACATTTTATTACATCATT+TGG | + | tig0024052:16026-16045 | Msa1413690:intron | 15.0% |
| !! | TAAAAGTTATTTATCTCAAA+AGG | + | tig0024052:16948-16967 | Msa1413690:intron | 15.0% |
| !! | TTAGTCAATACTTTATTAAT+TGG | + | tig0024052:17095-17114 | Msa1413690:intron | 15.0% |
| !!! | TATACTAAGAAATTGGTTTT+AGG | - | tig0024052:12352-12371 | None:intergenic | 20.0% |
| !!! | TGAAGATAATCACTTTTTTA+AGG | - | tig0024052:12500-12519 | None:intergenic | 20.0% |
| !! | TCAATTTAGTGAAATAAAGT+AGG | + | tig0024052:13154-13173 | Msa1413690:intron | 20.0% |
| !!! | TATGGAAAAAAATTCACTTT+TGG | + | tig0024052:13211-13230 | Msa1413690:intron | 20.0% |
| !! | CAAATTACAAACAAATAACA+CGG | - | tig0024052:13337-13356 | None:intergenic | 20.0% |
| !!! | TTTTCACATAACATATTCAT+AGG | - | tig0024052:13661-13680 | None:intergenic | 20.0% |
| !! | AAGATGGTGTTTAAATAATT+CGG | - | tig0024052:13992-14011 | None:intergenic | 20.0% |
| !!! | ACATAATAAAGCATCATAAT+AGG | - | tig0024052:14231-14250 | None:intergenic | 20.0% |
| !!! | AATGAAGAAATTGATAGTAA+CGG | - | tig0024052:14294-14313 | None:intergenic | 20.0% |
| !!! | ATTAAATTACTTTTTTGAGG+GGG | + | tig0024052:14776-14795 | Msa1413690:intron | 20.0% |
| !!! | AACTATGATCTCTTTAATTT+TGG | + | tig0024052:15756-15775 | Msa1413690:intron | 20.0% |
| !! | AGACAATATATAGAAGATAA+AGG | - | tig0024052:15833-15852 | None:intergenic | 20.0% |
| !! | CATGATCAAAATAATGAAAT+AGG | - | tig0024052:16227-16246 | None:intergenic | 20.0% |
| !!! | CTATTTCATTATTTTGATCA+TGG | + | tig0024052:16225-16244 | Msa1413690:intron | 20.0% |
| !! | AAATACAACCAATTATAGAA+AGG | - | tig0024052:16397-16416 | None:intergenic | 20.0% |
| !! | TTTCTATAATTGGTTGTATT+TGG | + | tig0024052:16396-16415 | Msa1413690:intron | 20.0% |
| !! | TTAAGAGAATCAATATACAA+AGG | - | tig0024052:16465-16484 | None:intergenic | 20.0% |
| !! | TTGTACAAATATTGACAAAA+AGG | + | tig0024052:16560-16579 | Msa1413690:CDS | 20.0% |
| !! | GGTTTAAAAGATTCAAAAAT+TGG | + | tig0024052:16687-16706 | Msa1413690:intron | 20.0% |
| !!! | TTATCTCAAAAGGTAAATTT+TGG | + | tig0024052:16958-16977 | Msa1413690:intron | 20.0% |
| !! | AACAAAGTTGAAGTTATTTA+TGG | - | tig0024052:17158-17177 | None:intergenic | 20.0% |
| !! | TAAATAAGTGCAAATTTAAG+TGG | + | tig0024052:17635-17654 | Msa1413690:intron | 20.0% |
| !! | CTGTCATTATTATATTAACT+TGG | + | tig0024052:17736-17755 | Msa1413690:intron | 20.0% |
| !!! | GATCATATTTTATTATCCTT+CGG | + | tig0024052:17943-17962 | Msa1413690:intron | 20.0% |
| ! | AATGGAAATGAAGAGAATTA+GGG | - | tig0024052:12308-12327 | None:intergenic | 25.0% |
| ! | AAATGGAAATGAAGAGAATT+AGG | - | tig0024052:12309-12328 | None:intergenic | 25.0% |
| ! | ATGAAAATGGAAAGAGAAAA+CGG | - | tig0024052:12529-12548 | None:intergenic | 25.0% |
| !!! | AACTTTTTAAGCGCTTTTTT+AGG | + | tig0024052:12575-12594 | Msa1413690:five_prime_UTR | 25.0% |
| !! | TTTTGTGATGATTTTTGTGA+TGG | + | tig0024052:12941-12960 | Msa1413690:intron | 25.0% |
| !! | TTTGTGATGATTTTTGTGAT+GGG | + | tig0024052:12942-12961 | Msa1413690:intron | 25.0% |
| ! | TTTCCAATCAACAAGATATA+GGG | - | tig0024052:13092-13111 | None:intergenic | 25.0% |
| !! | TTTTCCAATCAACAAGATAT+AGG | - | tig0024052:13093-13112 | None:intergenic | 25.0% |
| !!! | TTTTCTGCAGTTTTTTTGTA+TGG | + | tig0024052:13113-13132 | Msa1413690:intron | 25.0% |
| !!! | TATACAGACTCTTTGTTTTA+AGG | - | tig0024052:13255-13274 | None:intergenic | 25.0% |
| ! | TGAATATGTTATGTGAAAAC+TGG | + | tig0024052:13662-13681 | Msa1413690:intron | 25.0% |
| !! | CGGTTTTCTATTATCAAAAT+CGG | - | tig0024052:13972-13991 | None:intergenic | 25.0% |
| !! | ATTTAAACACCATCTTTTCT+TGG | + | tig0024052:13996-14015 | Msa1413690:intron | 25.0% |
| !! | TGCTTAATAATTTTCGACTA+CGG | + | tig0024052:14122-14141 | Msa1413690:intron | 25.0% |
| ! | TGTTCAACATAATTCACAAT+TGG | - | tig0024052:14195-14214 | None:intergenic | 25.0% |
| ! | TCAGTTTAATATCTGATATG+TGG | + | tig0024052:14735-14754 | Msa1413690:intron | 25.0% |
| ! | TTTAATATCGTATGACTCAT+TGG | - | tig0024052:14762-14781 | None:intergenic | 25.0% |
| !! | TAACAGATCTGCATTTTATT+CGG | - | tig0024052:14976-14995 | None:intergenic | 25.0% |
| !! | AGGGCATAATTTTCAAATTA+AGG | - | tig0024052:15036-15055 | None:intergenic | 25.0% |
| !!! | AAGCTTTTTATTGTTGTTAC+AGG | + | tig0024052:15340-15359 | Msa1413690:intron | 25.0% |
| !!! | AGCTTTTTATTGTTGTTACA+GGG | + | tig0024052:15341-15360 | Msa1413690:intron | 25.0% |
| ! | ATACAAAACACTGCATTTAA+GGG | - | tig0024052:15479-15498 | None:intergenic | 25.0% |
| ! | TAATTATTTAAATATGGCGG+TGG | - | tig0024052:16006-16025 | None:intergenic | 25.0% |
| ! | TATTACATCATTTGGATTGA+AGG | + | tig0024052:16034-16053 | Msa1413690:intron | 25.0% |
| ! | TTTCTGTTCCTTTCTATAAT+TGG | + | tig0024052:16386-16405 | Msa1413690:intron | 25.0% |
| ! | TATAATTGGTTGTATTTGGA+TGG | + | tig0024052:16400-16419 | Msa1413690:intron | 25.0% |
| ! | ACTGCATATTACAAAAGAAA+CGG | - | tig0024052:16503-16522 | None:intergenic | 25.0% |
| !! | TTTCTTTTGTAATATGCAGT+CGG | + | tig0024052:16503-16522 | Msa1413690:intron | 25.0% |
| !!! | GGTAAAACTACTTTTAGTTT+AGG | + | tig0024052:16642-16661 | Msa1413690:intron | 25.0% |
| !! | AATCTTTTAAACCATTTGAG+CGG | - | tig0024052:16680-16699 | None:intergenic | 25.0% |
| ! | ATAATGCATCCATGAATTAT+CGG | + | tig0024052:16767-16786 | Msa1413690:intron | 25.0% |
| ! | TAATTAGTGTTGTCAAATTG+TGG | + | tig0024052:17312-17331 | Msa1413690:intron | 25.0% |
| ! | TTTGCACTTATTTAAATGAC+TGG | - | tig0024052:17629-17648 | None:intergenic | 25.0% |
| !! | GTTATTTAGTTTCAGTTACT+TGG | + | tig0024052:18265-18284 | Msa1413690:three_prime_UTR | 25.0% |
| !! | GTTTGGAATAACAAAGGTTT+TGG | - | tig0024052:12233-12252 | None:intergenic | 30.0% |
| ATTCTCTTCATTTCCATTTC+CGG | + | tig0024052:12310-12329 | Msa1413690:five_prime_UTR | 30.0% | |
| AGGAAAATATTACATTGACC+CGG | - | tig0024052:12332-12351 | None:intergenic | 30.0% | |
| !!! | TTTCTGGTTTTTTCTGAAAC+TGG | + | tig0024052:12398-12417 | Msa1413690:five_prime_UTR | 30.0% |
| !!! | TTCTGGTTTTTTCTGAAACT+GGG | + | tig0024052:12399-12418 | Msa1413690:five_prime_UTR | 30.0% |
| TGATTAGGAGAATAAGATGA+AGG | - | tig0024052:12754-12773 | None:intergenic | 30.0% | |
| TATTCTCCTAATCATGATCA+TGG | + | tig0024052:12760-12779 | Msa1413690:CDS | 30.0% | |
| ATAATAACCCAAACAATCGA+AGG | + | tig0024052:12848-12867 | Msa1413690:CDS | 30.0% | |
| TAATAACCCAAACAATCGAA+GGG | + | tig0024052:12849-12868 | Msa1413690:CDS | 30.0% | |
| AAACCCTATATCTTGTTGAT+TGG | + | tig0024052:13086-13105 | Msa1413690:intron | 30.0% | |
| AGGAATTGTTATCTGTGATA+TGG | + | tig0024052:13193-13212 | Msa1413690:intron | 30.0% | |
| ! | TGTCGTTATTTCGATTTCAT+TGG | + | tig0024052:13487-13506 | Msa1413690:intron | 30.0% |
| CACAGAAAATGACAATATCA+GGG | - | tig0024052:13749-13768 | None:intergenic | 30.0% | |
| ACACAGAAAATGACAATATC+AGG | - | tig0024052:13750-13769 | None:intergenic | 30.0% | |
| TAACCTAAACCAAGAAAAGA+TGG | - | tig0024052:14008-14027 | None:intergenic | 30.0% | |
| AACATAATTCACAATTGGAG+GGG | - | tig0024052:14190-14209 | None:intergenic | 30.0% | |
| CAACATAATTCACAATTGGA+GGG | - | tig0024052:14191-14210 | None:intergenic | 30.0% | |
| TCAACATAATTCACAATTGG+AGG | - | tig0024052:14192-14211 | None:intergenic | 30.0% | |
| GAGGTTTAGGAGAAATTAAT+GGG | - | tig0024052:14425-14444 | None:intergenic | 30.0% | |
| TGAGGTTTAGGAGAAATTAA+TGG | - | tig0024052:14426-14445 | None:intergenic | 30.0% | |
| AATCCTACTATATGAGGTTT+AGG | - | tig0024052:14438-14457 | None:intergenic | 30.0% | |
| TACAGACAAAAAATGCATCT+AGG | + | tig0024052:14577-14596 | Msa1413690:intron | 30.0% | |
| TACATTTGATCTTAGCCAAA+AGG | - | tig0024052:14702-14721 | None:intergenic | 30.0% | |
| !!! | GATTTTTTTCTCAACAGCTA+TGG | + | tig0024052:15163-15182 | Msa1413690:intron | 30.0% |
| ! | CGTTTTATGACAGCTTAAAA+TGG | + | tig0024052:15223-15242 | Msa1413690:intron | 30.0% |
| ! | CAGCTTAAAATGGAGAATTT+TGG | + | tig0024052:15233-15252 | Msa1413690:intron | 30.0% |
| AATAAAAAGCTTTCTACCTC+TGG | - | tig0024052:15332-15351 | None:intergenic | 30.0% | |
| !! | TTTTTATTGTTGTTACAGGG+AGG | + | tig0024052:15344-15363 | Msa1413690:intron | 30.0% |
| CATACAAAACACTGCATTTA+AGG | - | tig0024052:15480-15499 | None:intergenic | 30.0% | |
| CACAATCAAAACGAATCAAA+AGG | - | tig0024052:15712-15731 | None:intergenic | 30.0% | |
| ACAGAAAATATTCATACCCT+GGG | - | tig0024052:16373-16392 | None:intergenic | 30.0% | |
| AACAGAAAATATTCATACCC+TGG | - | tig0024052:16374-16393 | None:intergenic | 30.0% | |
| ATTTGTACAATAGACAGTTC+TGG | - | tig0024052:16550-16569 | None:intergenic | 30.0% | |
| !! | GTCATTTTAACATGTTTACC+AGG | + | tig0024052:16739-16758 | Msa1413690:intron | 30.0% |
| AACTTCTTTGAATCATCATG+TGG | + | tig0024052:16883-16902 | Msa1413690:CDS | 30.0% | |
| AGTTGAAGTTATTTATGGTG+CGG | - | tig0024052:17153-17172 | None:intergenic | 30.0% | |
| AGAAAGGAAGAAAATCATGA+TGG | - | tig0024052:17202-17221 | None:intergenic | 30.0% | |
| !! | TACAAAGTGTTGTCAAATAG+CGG | + | tig0024052:17392-17411 | Msa1413690:intron | 30.0% |
| ! | AATACTAGTGTTGTTAGTCA+TGG | - | tig0024052:17469-17488 | None:intergenic | 30.0% |
| GCGTCAATAAGGAAAATAAA+GGG | - | tig0024052:17533-17552 | None:intergenic | 30.0% | |
| GCGTAGTTGTTAATTAAGTA+GGG | + | tig0024052:17551-17570 | Msa1413690:intron | 30.0% | |
| CGTAGTTGTTAATTAAGTAG+GGG | + | tig0024052:17552-17571 | Msa1413690:intron | 30.0% | |
| CTCAAGAAGGAAGAAATAAA+CGG | - | tig0024052:17789-17808 | None:intergenic | 30.0% | |
| CAAAAACTATCCTCCAATAA+TGG | - | tig0024052:17885-17904 | None:intergenic | 30.0% | |
| GACACAAAGATGAAAATAAC+CGG | - | tig0024052:18132-18151 | None:intergenic | 30.0% | |
| ! | AATAGTTTAAGACCAAGACT+GGG | - | tig0024052:18225-18244 | None:intergenic | 30.0% |
| ! | AAATAGTTTAAGACCAAGAC+TGG | - | tig0024052:18226-18245 | None:intergenic | 30.0% |
| GTTTCAGTTACTTGGTTATT+TGG | + | tig0024052:18273-18292 | Msa1413690:three_prime_UTR | 30.0% | |
| ! | TTTAACTTACACTGTCTCGT+TGG | - | tig0024052:12209-12228 | None:intergenic | 35.0% |
| ! | GAGAGAGTTTGGAATAACAA+AGG | - | tig0024052:12239-12258 | None:intergenic | 35.0% |
| TTCTCTTCATTTCCATTTCC+GGG | + | tig0024052:12311-12330 | Msa1413690:five_prime_UTR | 35.0% | |
| ATATTACATTGACCCGGAAA+TGG | - | tig0024052:12326-12345 | None:intergenic | 35.0% | |
| ! | TAGGCTTTAATTCTCTACCA+TGG | + | tig0024052:12594-12613 | Msa1413690:exon | 35.0% |
| !!! | TGGTTTTGAGTCCATTTTGT+TGG | - | tig0024052:12653-12672 | None:intergenic | 35.0% |
| ! | CTGAATTCAGATTCAGCTTT+TGG | - | tig0024052:12673-12692 | None:intergenic | 35.0% |
| TGATGAGATTAAACCCTTGA+CGG | - | tig0024052:12786-12805 | None:intergenic | 35.0% | |
| GGGTTATTATCATTAGCAGA+AGG | - | tig0024052:12838-12857 | None:intergenic | 35.0% | |
| ATCATACCCTTCGATTGTTT+GGG | - | tig0024052:12858-12877 | None:intergenic | 35.0% | |
| AATCATACCCTTCGATTGTT+TGG | - | tig0024052:12859-12878 | None:intergenic | 35.0% | |
| CAATCAAAATGAGGGATCAA+AGG | - | tig0024052:12888-12907 | None:intergenic | 35.0% | |
| !!! | GCAGTTTTTTTGTATGGTGA+AGG | + | tig0024052:13119-13138 | Msa1413690:intron | 35.0% |
| AGATAACAATTCCTGATGCA+TGG | - | tig0024052:13187-13206 | None:intergenic | 35.0% | |
| ! | ATTTGTGTTTGCTACATTCG+TGG | + | tig0024052:13352-13371 | Msa1413690:intron | 35.0% |
| ACTGAAATTGTCGAAGATTG+CGG | - | tig0024052:13415-13434 | None:intergenic | 35.0% | |
| ! | AGGAGAAACAATTTTACCCA+AGG | + | tig0024052:13800-13819 | Msa1413690:CDS | 35.0% |
| ! | GGAGAAACAATTTTACCCAA+GGG | + | tig0024052:13801-13820 | Msa1413690:CDS | 35.0% |
| ! | ACACCATCTTTTCTTGGTTT+AGG | + | tig0024052:14002-14021 | Msa1413690:intron | 35.0% |
| ! | TTTCTTGGTTTAGGTTACTG+AGG | + | tig0024052:14011-14030 | Msa1413690:intron | 35.0% |
| TTGTCCACAATTGGTGAATA+AGG | - | tig0024052:14049-14068 | None:intergenic | 35.0% | |
| GTAACTTACTTGTCCACAAT+TGG | - | tig0024052:14058-14077 | None:intergenic | 35.0% | |
| ! | ACGAGTCTTCATTGATAGTT+TGG | + | tig0024052:14076-14095 | Msa1413690:intron | 35.0% |
| ! | CATTGATAGTTTGGTTAGCA+TGG | + | tig0024052:14085-14104 | Msa1413690:intron | 35.0% |
| ACATAATTCACAATTGGAGG+GGG | - | tig0024052:14189-14208 | None:intergenic | 35.0% | |
| AATTTCTTCATTCAGCTACG+TGG | + | tig0024052:14302-14321 | Msa1413690:intron | 35.0% | |
| TACATGCTTACTCTTGAGTT+TGG | + | tig0024052:14348-14367 | Msa1413690:intron | 35.0% | |
| ! | GTTTGGTAATCTGAGTTATG+AGG | + | tig0024052:14365-14384 | Msa1413690:intron | 35.0% |
| TCTCCTAAACCTCATATAGT+AGG | + | tig0024052:14432-14451 | Msa1413690:intron | 35.0% | |
| ACGAACAATCCTACTATATG+AGG | - | tig0024052:14444-14463 | None:intergenic | 35.0% | |
| TTCGTAAAGCTTAACTGAAC+TGG | + | tig0024052:14459-14478 | Msa1413690:intron | 35.0% | |
| !! | CAAGCCTAACAATTTTGGTA+TGG | - | tig0024052:14485-14504 | None:intergenic | 35.0% |
| GTGAAATACGCTGTTGTAAA+TGG | + | tig0024052:14656-14675 | Msa1413690:intron | 35.0% | |
| AGAAGCAGTGTGTCAAATAT+CGG | + | tig0024052:15119-15138 | Msa1413690:intron | 35.0% | |
| CCAATTTGTGAAAGATTGCA+GGG | + | tig0024052:15186-15205 | Msa1413690:intron | 35.0% | |
| !!! | GCTTTGTGAGTTTTGTTGTA+TGG | - | tig0024052:15388-15407 | None:intergenic | 35.0% |
| AAAACTCACAAAGCGATAGA+GGG | + | tig0024052:15394-15413 | Msa1413690:intron | 35.0% | |
| AACACTGCATTTAAGGGTTT+GGG | - | tig0024052:15473-15492 | None:intergenic | 35.0% | |
| AAACACTGCATTTAAGGGTT+TGG | - | tig0024052:15474-15493 | None:intergenic | 35.0% | |
| CTTGGTTAAAAGATCGTCAT+AGG | - | tig0024052:15594-15613 | None:intergenic | 35.0% | |
| TAACACATAGTAGGATCACA+TGG | - | tig0024052:15649-15668 | None:intergenic | 35.0% | |
| TGTGATCCTACTATGTGTTA+AGG | + | tig0024052:15649-15668 | Msa1413690:intron | 35.0% | |
| ATTGTGCCTTAACACATAGT+AGG | - | tig0024052:15658-15677 | None:intergenic | 35.0% | |
| !!! | TGATTCGTTTTGATTGTGTC+TGG | + | tig0024052:15714-15733 | Msa1413690:intron | 35.0% |
| AGTTGAATTGTCGAAGAGAA+AGG | - | tig0024052:15857-15876 | None:intergenic | 35.0% | |
| TTACATCACCAAAAAACACG+TGG | + | tig0024052:16168-16187 | Msa1413690:intron | 35.0% | |
| TACATCACCAAAAAACACGT+GGG | + | tig0024052:16169-16188 | Msa1413690:intron | 35.0% | |
| ATGGAATTCATGTCAACAGA+TGG | + | tig0024052:16244-16263 | Msa1413690:intron | 35.0% | |
| CAGAAAATATTCATACCCTG+GGG | - | tig0024052:16372-16391 | None:intergenic | 35.0% | |
| ATAATTGTTGACCGCTCAAA+TGG | + | tig0024052:16666-16685 | Msa1413690:intron | 35.0% | |
| GGTTAATAAGTAGCACTTCT+TGG | + | tig0024052:16708-16727 | Msa1413690:intron | 35.0% | |
| CATGTAACTCCGATAATTCA+TGG | - | tig0024052:16779-16798 | None:intergenic | 35.0% | |
| !! | TTCAACTCGAATTGCTTTTG+TGG | + | tig0024052:17041-17060 | Msa1413690:CDS | 35.0% |
| ! | TGCTTTTGTGGAATTTGCAA+TGG | + | tig0024052:17053-17072 | Msa1413690:CDS | 35.0% |
| GCGAGACAGATAATTAAGAA+AGG | - | tig0024052:17218-17237 | None:intergenic | 35.0% | |
| CTTTACAAGAACAATCCACT+GGG | - | tig0024052:17273-17292 | None:intergenic | 35.0% | |
| CGCGTCAATAAGGAAAATAA+AGG | - | tig0024052:17534-17553 | None:intergenic | 35.0% | |
| TTAACAACTACGCGTCAATA+AGG | - | tig0024052:17544-17563 | None:intergenic | 35.0% | |
| CGCGTAGTTGTTAATTAAGT+AGG | + | tig0024052:17550-17569 | Msa1413690:intron | 35.0% | |
| ! | TTATTTCTTCCTTCTTGAGC+AGG | + | tig0024052:17790-17809 | Msa1413690:intron | 35.0% |
| ATTGTTGCACTAAACTGTAG+CGG | + | tig0024052:17824-17843 | Msa1413690:CDS | 35.0% | |
| ATAATGGTACCAAACCTGAT+AGG | - | tig0024052:17869-17888 | None:intergenic | 35.0% | |
| ! | ATCAGGTTTGGTACCATTAT+TGG | + | tig0024052:17869-17888 | Msa1413690:intron | 35.0% |
| TATTATCCTTCGGATTCTGT+AGG | + | tig0024052:17953-17972 | Msa1413690:intron | 35.0% | |
| ATTATCCTTCGGATTCTGTA+GGG | + | tig0024052:17954-17973 | Msa1413690:intron | 35.0% | |
| CTAAATATCCTCTCAAGTCT+TGG | - | tig0024052:18055-18074 | None:intergenic | 35.0% | |
| !! | GTGAAACTGTCTTTTGTTTC+CGG | + | tig0024052:18110-18129 | Msa1413690:three_prime_UTR | 35.0% |
| TTAGAGCGCAGAACATTTAA+AGG | - | tig0024052:18185-18204 | None:intergenic | 35.0% | |
| ! | ATAGTTTAAGACCAAGACTG+GGG | - | tig0024052:18224-18243 | None:intergenic | 35.0% |
| AAAACCACACAACACAAGGA+AGG | + | tig0024052:12182-12201 | Msa1413690:five_prime_UTR | 40.0% | |
| AAACCACACAACACAAGGAA+GGG | + | tig0024052:12183-12202 | Msa1413690:five_prime_UTR | 40.0% | |
| GAGAAAGAAAGAGATGAGAG+AGG | - | tig0024052:12261-12280 | None:intergenic | 40.0% | |
| ! | AGCGTGATTTTGTTCGTTTC+TGG | + | tig0024052:12382-12401 | Msa1413690:five_prime_UTR | 40.0% |
| TTCAGCTGATGCCAACAAAA+TGG | + | tig0024052:12639-12658 | Msa1413690:CDS | 40.0% | |
| GTTCACAAAGCTGAATCCTT+TGG | + | tig0024052:12714-12733 | Msa1413690:CDS | 40.0% | |
| AAAGCTGAATCCTTTGGCTA+AGG | + | tig0024052:12720-12739 | Msa1413690:CDS | 40.0% | |
| GGAAAAAACTCCTTAGCCAA+AGG | - | tig0024052:12733-12752 | None:intergenic | 40.0% | |
| ! | CATCACTCCTAACCATTTTC+TGG | + | tig0024052:12801-12820 | Msa1413690:CDS | 40.0% |
| ! | GTGTTGACCAGAAAATGGTT+AGG | - | tig0024052:12811-12830 | None:intergenic | 40.0% |
| !! | GCTTAGTGTTGACCAGAAAA+TGG | - | tig0024052:12816-12835 | None:intergenic | 40.0% |
| ! | TGAATTGTGTTTGTGCTGCT+TGG | + | tig0024052:12992-13011 | Msa1413690:intron | 40.0% |
| CTGCATTGTGATGGCATTTA+TGG | + | tig0024052:13378-13397 | Msa1413690:intron | 40.0% | |
| ATACGACACGTATCATGCTA+TGG | + | tig0024052:13631-13650 | Msa1413690:intron | 40.0% | |
| ! | ATTGTTTCTCCTCTGCAAGA+GGG | - | tig0024052:13792-13811 | None:intergenic | 40.0% |
| ! | AATTGTTTCTCCTCTGCAAG+AGG | - | tig0024052:13793-13812 | None:intergenic | 40.0% |
| ! | GAAACAATTTTACCCAAGGG+AGG | + | tig0024052:13804-13823 | Msa1413690:CDS | 40.0% |
| AGACAGTATTCCAATGTTGC+TGG | + | tig0024052:14157-14176 | Msa1413690:intron | 40.0% | |
| CATAATTCACAATTGGAGGG+GGG | - | tig0024052:14188-14207 | None:intergenic | 40.0% | |
| CTGGCCATACCAAAATTGTT+AGG | + | tig0024052:14478-14497 | Msa1413690:intron | 40.0% | |
| ! | GGTGTCAAGCCTAACAATTT+TGG | - | tig0024052:14490-14509 | None:intergenic | 40.0% |
| !! | TGGTGTCGATATACCTTTCT+CGG | + | tig0024052:14676-14695 | Msa1413690:intron | 40.0% |
| ! | ATATACCTTTCTCGGCCTTT+TGG | + | tig0024052:14684-14703 | Msa1413690:intron | 40.0% |
| !!! | ATTACTTTTTTGAGGGGGAG+AGG | + | tig0024052:14781-14800 | Msa1413690:intron | 40.0% |
| GCCAATTTGTGAAAGATTGC+AGG | + | tig0024052:15185-15204 | Msa1413690:intron | 40.0% | |
| CCCTGCAATCTTTCACAAAT+TGG | - | tig0024052:15189-15208 | None:intergenic | 40.0% | |
| !!! | AGAATTTTGGCTTTCTGCCA+TGG | + | tig0024052:15246-15265 | Msa1413690:intron | 40.0% |
| ! | GCAGTGTTATCGATTACAGA+TGG | - | tig0024052:15276-15295 | None:intergenic | 40.0% |
| TGTAAGTTATGCATCACCAG+AGG | + | tig0024052:15313-15332 | Msa1413690:intron | 40.0% | |
| CAAAACTCACAAAGCGATAG+AGG | + | tig0024052:15393-15412 | Msa1413690:intron | 40.0% | |
| ! | ATCCAGGTCAGATTTTCGAT+GGG | - | tig0024052:15443-15462 | None:intergenic | 40.0% |
| ! | AATCCAGGTCAGATTTTCGA+TGG | - | tig0024052:15444-15463 | None:intergenic | 40.0% |
| TTAACCAAGTCCACACTAGA+AGG | + | tig0024052:15605-15624 | Msa1413690:intron | 40.0% | |
| TAACCAAGTCCACACTAGAA+GGG | + | tig0024052:15606-15625 | Msa1413690:intron | 40.0% | |
| TTGTGTCTGGACTGTGAATT+TGG | + | tig0024052:15727-15746 | Msa1413690:intron | 40.0% | |
| ! | GTCATTGATTGCCGAATTTG+TGG | + | tig0024052:16056-16075 | Msa1413690:CDS | 40.0% |
| AATGCGGATCACCACAAATT+CGG | - | tig0024052:16070-16089 | None:intergenic | 40.0% | |
| AAAATATTCATACCCTGGGG+AGG | - | tig0024052:16369-16388 | None:intergenic | 40.0% | |
| ATGGATGCATTATGCTATCC+TGG | - | tig0024052:16760-16779 | None:intergenic | 40.0% | |
| ACATTGCCTTTCCATTTCAC+AGG | + | tig0024052:16984-17003 | Msa1413690:intron | 40.0% | |
| CCTTTACAAGAACAATCCAC+TGG | - | tig0024052:17274-17293 | None:intergenic | 40.0% | |
| !! | CCAGTGGATTGTTCTTGTAA+AGG | + | tig0024052:17271-17290 | Msa1413690:intron | 40.0% |
| GTTTGAATTTCACTACGCTG+CGG | - | tig0024052:17426-17445 | None:intergenic | 40.0% | |
| AAAGCGTGTTTGCAATGCAA+TGG | + | tig0024052:17501-17520 | Msa1413690:intron | 40.0% | |
| AATGATTCATGCACGTGATG+AGG | - | tig0024052:17600-17619 | None:intergenic | 40.0% | |
| AAGTGCAAATTTAAGTGGCG+TGG | + | tig0024052:17640-17659 | Msa1413690:intron | 40.0% | |
| AGAGAAACCGATATGTTGAC+TGG | + | tig0024052:17763-17782 | Msa1413690:intron | 40.0% | |
| TAAACGGCCAGTCAACATAT+CGG | - | tig0024052:17773-17792 | None:intergenic | 40.0% | |
| GCTACAGTTTAGTGCAACAA+TGG | - | tig0024052:17825-17844 | None:intergenic | 40.0% | |
| ! | AGGTTTGGTACCATTATTGG+AGG | + | tig0024052:17872-17891 | Msa1413690:intron | 40.0% |
| ATATCCTCTCAAGTCTTGGT+TGG | - | tig0024052:18051-18070 | None:intergenic | 40.0% | |
| CTTTCCAGTTGAGACTTGTA+TGG | + | tig0024052:18079-18098 | Msa1413690:three_prime_UTR | 40.0% | |
| TCTTCCATACAAGTCTCAAC+TGG | - | tig0024052:18086-18105 | None:intergenic | 40.0% | |
| AGTTGAGACTTGTATGGAAG+AGG | + | tig0024052:18085-18104 | Msa1413690:three_prime_UTR | 40.0% | |
| GCGCTCTAACTTAACTTTCT+AGG | + | tig0024052:18196-18215 | Msa1413690:three_prime_UTR | 40.0% | |
| AATCATGCCTTTCACCAGTT+TGG | + | tig0024052:18306-18325 | Msa1413690:three_prime_UTR | 40.0% | |
| AGATGAGAGAGGAGAGAGTT+TGG | - | tig0024052:12250-12269 | None:intergenic | 45.0% | |
| AGCAGTAACAACAGTTGCCA+TGG | - | tig0024052:12614-12633 | None:intergenic | 45.0% | |
| TGACGGCCATGATCATGATT+AGG | - | tig0024052:12769-12788 | None:intergenic | 45.0% | |
| AATCATGATCATGGCCGTCA+AGG | + | tig0024052:12769-12788 | Msa1413690:CDS | 45.0% | |
| ATCATGATCATGGCCGTCAA+GGG | + | tig0024052:12770-12789 | Msa1413690:CDS | 45.0% | |
| TAGGAGAGAAACCATGCATC+AGG | + | tig0024052:13173-13192 | Msa1413690:intron | 45.0% | |
| ! | ATTTTACCCAAGGGAGGAGA+AGG | + | tig0024052:13810-13829 | Msa1413690:CDS | 45.0% |
| GTTGAACGGAAGATCGCTAA+AGG | + | tig0024052:13832-13851 | Msa1413690:CDS | 45.0% | |
| ! | TGGTTTAGGTTACTGAGGAG+CGG | + | tig0024052:14016-14035 | Msa1413690:intron | 45.0% |
| !! | GCAGCCTTATTCACCAATTG+TGG | + | tig0024052:14042-14061 | Msa1413690:CDS | 45.0% |
| TGGGATAGTCTGTTGTGTGT+GGG | - | tig0024052:15061-15080 | None:intergenic | 45.0% | |
| TTGGGATAGTCTGTTGTGTG+TGG | - | tig0024052:15062-15081 | None:intergenic | 45.0% | |
| ! | TGACTGTGTGTGCGTCTTTT+GGG | - | tig0024052:15080-15099 | None:intergenic | 45.0% |
| AGTGTGTCAAATATCGGCCA+TGG | + | tig0024052:15125-15144 | Msa1413690:intron | 45.0% | |
| CATAAAACGTCATCGCGTTG+CGG | - | tig0024052:15212-15231 | None:intergenic | 45.0% | |
| TTGTTACAGGGAGGTCATGA+AGG | + | tig0024052:15353-15372 | Msa1413690:intron | 45.0% | |
| ! | CTACAATGTGTTTTCCGCAG+TGG | + | tig0024052:15417-15436 | Msa1413690:intron | 45.0% |
| CGTAGTAATGCTTCGTTCTC+AGG | + | tig0024052:15520-15539 | Msa1413690:intron | 45.0% | |
| CTTCGTTCTCAGGATCGAAA+TGG | + | tig0024052:15530-15549 | Msa1413690:intron | 45.0% | |
| AACCAAGTCCACACTAGAAG+GGG | + | tig0024052:15607-15626 | Msa1413690:intron | 45.0% | |
| AGAAGGGGAGGAATACTCAT+AGG | + | tig0024052:15622-15641 | Msa1413690:intron | 45.0% | |
| GCAAAGCGAAGAACTGAATG+CGG | - | tig0024052:16086-16105 | None:intergenic | 45.0% | |
| TCATGTCAACAGATGGTGCA+AGG | + | tig0024052:16251-16270 | Msa1413690:intron | 45.0% | |
| CATGTCAACAGATGGTGCAA+GGG | + | tig0024052:16252-16271 | Msa1413690:intron | 45.0% | |
| TGCTTGGATACTATCCAGTG+AGG | + | tig0024052:16299-16318 | Msa1413690:CDS | 45.0% | |
| GCTTGGATACTATCCAGTGA+GGG | + | tig0024052:16300-16319 | Msa1413690:CDS | 45.0% | |
| ! | GGATAGCAGTTTTCGAAGGA+AGG | - | tig0024052:16327-16346 | None:intergenic | 45.0% |
| ! | GGAAGGATAGCAGTTTTCGA+AGG | - | tig0024052:16331-16350 | None:intergenic | 45.0% |
| GGAATGTAGGATTCACAGGA+AGG | - | tig0024052:16348-16367 | None:intergenic | 45.0% | |
| ATATGCAGTCGGATGATGAG+CGG | + | tig0024052:16514-16533 | Msa1413690:intron | 45.0% | |
| CTTTGAATCATCATGTGGCG+AGG | + | tig0024052:16888-16907 | Msa1413690:CDS | 45.0% | |
| GCGTAACCTGTGAAATGGAA+AGG | - | tig0024052:16993-17012 | None:intergenic | 45.0% | |
| !! | CAATTCGAGTTGAATGCACC+TGG | - | tig0024052:17035-17054 | None:intergenic | 45.0% |
| AAGTGTGCCTCGAAATGCAT+AGG | - | tig0024052:17245-17264 | None:intergenic | 45.0% | |
| ! | AAACTGTAGCGGCATGCTTT+TGG | + | tig0024052:17835-17854 | Msa1413690:CDS | 45.0% |
| ! | AACTGTAGCGGCATGCTTTT+GGG | + | tig0024052:17836-17855 | Msa1413690:CDS | 45.0% |
| !! | TTTTGGGAACTCAGCCTATC+AGG | + | tig0024052:17852-17871 | Msa1413690:CDS | 45.0% |
| ACTTACCCTACAGAATCCGA+AGG | - | tig0024052:17962-17981 | None:intergenic | 45.0% | |
| TTGGTTGGACAATGTCCGAT+CGG | - | tig0024052:18036-18055 | None:intergenic | 45.0% | |
| TTGTCCAACCAAGACTTGAG+AGG | + | tig0024052:18044-18063 | Msa1413690:three_prime_UTR | 45.0% | |
| !!! | TTTTAATTTATTTATATATC+TGG | + | tig0024052:12470-12489 | Msa1413690:five_prime_UTR | 5.0% |
| !!! | TTTAATTTATTTATATATCT+GGG | + | tig0024052:12471-12490 | Msa1413690:five_prime_UTR | 5.0% |
| !!! | TTTTTTTTTTCTTTTTTTAT+GGG | - | tig0024052:14880-14899 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTCTTTTTTTA+TGG | - | tig0024052:14881-14900 | None:intergenic | 5.0% |
| !! | TAAAAAAAGAAAAAAAAAAA+TGG | + | tig0024052:14881-14900 | Msa1413690:intron | 5.0% |
| !! | ATGTTATAATTATTTAAATA+TGG | - | tig0024052:16012-16031 | None:intergenic | 5.0% |
| GTTCAACCTTCTCCTCCCTT+GGG | - | tig0024052:13819-13838 | None:intergenic | 50.0% | |
| CAAGGGAGGAGAAGGTTGAA+CGG | + | tig0024052:13818-13837 | Msa1413690:CDS | 50.0% | |
| GGGGGAAATTCCAGCAACAT+TGG | - | tig0024052:14170-14189 | None:intergenic | 50.0% | |
| TTAGGCTTGACACCTTCTCC+CGG | + | tig0024052:14496-14515 | Msa1413690:intron | 50.0% | |
| GAAACTCACACACAACTGCG+AGG | - | tig0024052:14536-14555 | None:intergenic | 50.0% | |
| CTTAGCCAAAAGGCCGAGAA+AGG | - | tig0024052:14692-14711 | None:intergenic | 50.0% | |
| !! | TCACCTCAGTAGCTTGCTAC+TGG | + | tig0024052:14804-14823 | Msa1413690:intron | 50.0% |
| AGTCCAGTAGCAAGCTACTG+AGG | - | tig0024052:14810-14829 | None:intergenic | 50.0% | |
| GTTGCACTATTGCATGAGCC+AGG | + | tig0024052:14849-14868 | Msa1413690:intron | 50.0% | |
| !!! | CTTTTTTTATGGGGTGCGCC+TGG | - | tig0024052:14870-14889 | None:intergenic | 50.0% |
| GGATAGTCTGTTGTGTGTGG+GGG | - | tig0024052:15059-15078 | None:intergenic | 50.0% | |
| GGGATAGTCTGTTGTGTGTG+GGG | - | tig0024052:15060-15079 | None:intergenic | 50.0% | |
| ! | GTGACTGTGTGTGCGTCTTT+TGG | - | tig0024052:15081-15100 | None:intergenic | 50.0% |
| GTGTCAAATATCGGCCATGG+CGG | + | tig0024052:15128-15147 | Msa1413690:intron | 50.0% | |
| CGATTACAGATGGCAGACCA+TGG | - | tig0024052:15266-15285 | None:intergenic | 50.0% | |
| ! | AGATTTTCGATGGGCCACTG+CGG | - | tig0024052:15434-15453 | None:intergenic | 50.0% |
| ! | GGGTTTGGGACAACAAATCC+AGG | - | tig0024052:15459-15478 | None:intergenic | 50.0% |
| CACGCTTCCATGAGCTGTAA+TGG | + | tig0024052:15564-15583 | Msa1413690:intron | 50.0% | |
| AGGATCGCCATTACAGCTCA+TGG | - | tig0024052:15574-15593 | None:intergenic | 50.0% | |
| GTATTCCTCCCCTTCTAGTG+TGG | - | tig0024052:15618-15637 | None:intergenic | 50.0% | |
| !! | GCAAGGGCAGCTTTAAACCT+TGG | + | tig0024052:16268-16287 | Msa1413690:CDS | 50.0% |
| !! | AGGGCAGCTTTAAACCTTGG+TGG | + | tig0024052:16271-16290 | Msa1413690:CDS | 50.0% |
| ! | AACCTTGGTGGTACTGTGCT+TGG | + | tig0024052:16283-16302 | Msa1413690:CDS | 50.0% |
| ATCCAAGCACAGTACCACCA+AGG | - | tig0024052:16288-16307 | None:intergenic | 50.0% | |
| GGGAGGAATGTAGGATTCAC+AGG | - | tig0024052:16352-16371 | None:intergenic | 50.0% | |
| TGAATCCTACATTCCTCCCC+AGG | + | tig0024052:16353-16372 | Msa1413690:CDS | 50.0% | |
| GAATCCTACATTCCTCCCCA+GGG | + | tig0024052:16354-16373 | Msa1413690:CDS | 50.0% | |
| TATGCAGTCGGATGATGAGC+GGG | + | tig0024052:16515-16534 | Msa1413690:intron | 50.0% | |
| CAAGCGCGTAACCTGTGAAA+TGG | - | tig0024052:16998-17017 | None:intergenic | 50.0% | |
| TTTCACAGGTTACGCGCTTG+AGG | + | tig0024052:16998-17017 | Msa1413690:intron | 50.0% | |
| ! | GTTACGCGCTTGAGGCTTTT+GGG | + | tig0024052:17006-17025 | Msa1413690:CDS | 50.0% |
| ! | TTACGCGCTTGAGGCTTTTG+GGG | + | tig0024052:17007-17026 | Msa1413690:CDS | 50.0% |
| CGCAAGACCTATGCATTTCG+AGG | + | tig0024052:17235-17254 | Msa1413690:intron | 50.0% | |
| CACTTTCTGCCTGCTCAAGA+AGG | - | tig0024052:17802-17821 | None:intergenic | 50.0% | |
| GGAACTCAGCCTATCAGGTT+TGG | + | tig0024052:17857-17876 | Msa1413690:intron | 50.0% | |
| GTCCTTCAAAGACTCCAGTG+AGG | + | tig0024052:17980-17999 | Msa1413690:CDS | 50.0% | |
| AAAGACTCCAGTGAGGCCAA+GGG | + | tig0024052:17987-18006 | Msa1413690:CDS | 50.0% | |
| CCTGTATCGCGTTAACCGAT+CGG | + | tig0024052:18018-18037 | Msa1413690:exon | 50.0% | |
| CTTTCTAGGTACCCCAGTCT+TGG | + | tig0024052:18210-18229 | Msa1413690:three_prime_UTR | 50.0% | |
| TGGCCCTTCCTTGTGTTGTG+TGG | - | tig0024052:12189-12208 | None:intergenic | 55.0% | |
| TCGTGGTCGCTGCATTGTGA+TGG | + | tig0024052:13369-13388 | Msa1413690:intron | 55.0% | |
| TTTGCACTGCCCTCTTGCAG+AGG | + | tig0024052:13780-13799 | Msa1413690:intron | 55.0% | |
| CGTTCAACCTTCTCCTCCCT+TGG | - | tig0024052:13820-13839 | None:intergenic | 55.0% | |
| TAGGCTTGACACCTTCTCCC+GGG | + | tig0024052:14497-14516 | Msa1413690:intron | 55.0% | |
| AGTCTGTTGTGTGTGGGGGA+GGG | - | tig0024052:15055-15074 | None:intergenic | 55.0% | |
| TAGTCTGTTGTGTGTGGGGG+AGG | - | tig0024052:15056-15075 | None:intergenic | 55.0% | |
| GGCCCATCGAAAATCTGACC+TGG | + | tig0024052:15438-15457 | Msa1413690:intron | 55.0% | |
| ! | CAGCTCATGGAAGCGTGAGA+TGG | - | tig0024052:15561-15580 | None:intergenic | 55.0% |
| CTCCCCTTCTAGTGTGGACT+TGG | - | tig0024052:15612-15631 | None:intergenic | 55.0% | |
| CAAGTCCACACTAGAAGGGG+AGG | + | tig0024052:15610-15629 | Msa1413690:intron | 55.0% | |
| !!! | GTGTGCGCCCACGTGTTTTT+TGG | - | tig0024052:16179-16198 | None:intergenic | 55.0% |
| TTCGAAGGAAGGACCCTCAC+TGG | - | tig0024052:16316-16335 | None:intergenic | 55.0% | |
| CATACCCTGGGGAGGAATGT+AGG | - | tig0024052:16361-16380 | None:intergenic | 55.0% | |
| ! | GGTTACGCGCTTGAGGCTTT+TGG | + | tig0024052:17005-17024 | Msa1413690:intron | 55.0% |
| ! | TACGCGCTTGAGGCTTTTGG+GGG | + | tig0024052:17008-17027 | Msa1413690:CDS | 55.0% |
| AGGCACACTTTCGTTCCCAG+TGG | + | tig0024052:17255-17274 | Msa1413690:intron | 55.0% | |
| GGCCTCACTGGAGTCTTTGA+AGG | - | tig0024052:17985-18004 | None:intergenic | 55.0% | |
| CAAAGACTCCAGTGAGGCCA+AGG | + | tig0024052:17986-18005 | Msa1413690:CDS | 55.0% | |
| GATACAGGACGAGCAACCCT+TGG | - | tig0024052:18006-18025 | None:intergenic | 55.0% | |
| CCGATCGGTTAACGCGATAC+AGG | - | tig0024052:18021-18040 | None:intergenic | 55.0% | |
| CCTTCTCCCGGGTTCGAATC+CGG | + | tig0024052:14508-14527 | Msa1413690:intron | 60.0% | |
| CTTCTCCCGGGTTCGAATCC+GGG | + | tig0024052:14509-14528 | Msa1413690:intron | 60.0% | |
| CACACACAACTGCGAGGTCC+CGG | - | tig0024052:14530-14549 | None:intergenic | 60.0% | |
| TCCTCCATCGCATTCCGCCA+TGG | - | tig0024052:15145-15164 | None:intergenic | 60.0% | |
| !! | CTTGAGGCTTTTGGGGGACC+AGG | + | tig0024052:17014-17033 | Msa1413690:CDS | 60.0% |
| CCGGATTCGAACCCGGGAGA+AGG | - | tig0024052:14511-14530 | None:intergenic | 65.0% | |
| GAGGTCCCGGATTCGAACCC+GGG | - | tig0024052:14517-14536 | None:intergenic | 65.0% | |
| CGAGGTCCCGGATTCGAACC+CGG | - | tig0024052:14518-14537 | None:intergenic | 65.0% | |
| ! | TCGGCCATGGCGGAATGCGA+TGG | + | tig0024052:15138-15157 | Msa1413690:intron | 65.0% |
| ! | GCCATGGCGGAATGCGATGG+AGG | + | tig0024052:15141-15160 | Msa1413690:intron | 65.0% |
| CGAGCAACCCTTGGCCTCAC+TGG | - | tig0024052:17997-18016 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024052 | gene | 12179 | 18334 | 12179 | ID=Msa1413690;Name=Msa1413690 |
| tig0024052 | mRNA | 12179 | 18334 | 12179 | ID=Msa1413690-mRNA-1;Parent=Msa1413690;Name=Msa1413690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=434|1|1|1|1|1|10|302|298 |
| tig0024052 | exon | 12179 | 12870 | 12179 | ID=Msa1413690-mRNA-1:exon:21368;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 13800 | 13910 | 13800 | ID=Msa1413690-mRNA-1:exon:21369;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 14024 | 14068 | 14024 | ID=Msa1413690-mRNA-1:exon:21370;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 16056 | 16128 | 16056 | ID=Msa1413690-mRNA-1:exon:21371;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 16263 | 16375 | 16263 | ID=Msa1413690-mRNA-1:exon:21372;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 16522 | 16581 | 16522 | ID=Msa1413690-mRNA-1:exon:21373;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 16862 | 16909 | 16862 | ID=Msa1413690-mRNA-1:exon:21374;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 17006 | 17074 | 17006 | ID=Msa1413690-mRNA-1:exon:21375;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 17812 | 17873 | 17812 | ID=Msa1413690-mRNA-1:exon:21376;Parent=Msa1413690-mRNA-1 |
| tig0024052 | exon | 17975 | 18334 | 17975 | ID=Msa1413690-mRNA-1:exon:21377;Parent=Msa1413690-mRNA-1 |
| tig0024052 | five_prime_UTR | 12179 | 12612 | 12179 | ID=Msa1413690-mRNA-1:five_prime_utr;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 12613 | 12870 | 12613 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 13800 | 13910 | 13800 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 14024 | 14068 | 14024 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 16056 | 16128 | 16056 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 16263 | 16375 | 16263 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 16522 | 16581 | 16522 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 16862 | 16909 | 16862 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 17006 | 17074 | 17006 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 17812 | 17873 | 17812 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | CDS | 17975 | 18032 | 17975 | ID=Msa1413690-mRNA-1:cds;Parent=Msa1413690-mRNA-1 |
| tig0024052 | three_prime_UTR | 18033 | 18334 | 18033 | ID=Msa1413690-mRNA-1:three_prime_utr;Parent=Msa1413690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
