Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444070 | KEH33050.1 | 99.372 | 478 | 3 | 0 | 1 | 478 | 21 | 498 | 0.0 | 969 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444070 | sp|Q42586|UMPS_ARATH | 77.263 | 475 | 106 | 2 | 5 | 478 | 2 | 475 | 0.0 | 757 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444070 | A0A072V4E2 | 99.372 | 478 | 3 | 0 | 1 | 478 | 21 | 498 | 0.0 | 969 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000560 | Msa0444070 | 0.850074 | 2.147538e-60 | -8.615850e-47 |
| Msa0028420 | Msa0444070 | 0.812168 | 4.854901e-51 | -8.615850e-47 |
| Msa0036870 | Msa0444070 | 0.820899 | 5.374787e-53 | -8.615850e-47 |
| Msa0039790 | Msa0444070 | 0.807182 | 5.728299e-50 | -8.615850e-47 |
| Msa0043230 | Msa0444070 | 0.847462 | 1.138888e-59 | -8.615850e-47 |
| Msa0057420 | Msa0444070 | 0.827011 | 1.979973e-54 | -8.615850e-47 |
| Msa0074350 | Msa0444070 | 0.821623 | 3.658952e-53 | -8.615850e-47 |
| Msa0074510 | Msa0444070 | 0.811605 | 6.438447e-51 | -8.615850e-47 |
| Msa0090400 | Msa0444070 | 0.845359 | 4.266591e-59 | -8.615850e-47 |
| Msa0095900 | Msa0444070 | 0.834164 | 3.512147e-56 | -8.615850e-47 |
| Msa0136650 | Msa0444070 | 0.826742 | 2.296212e-54 | -8.615850e-47 |
| Msa0137130 | Msa0444070 | 0.829907 | 3.959071e-55 | -8.615850e-47 |
| Msa0137880 | Msa0444070 | 0.862205 | 5.974416e-64 | -8.615850e-47 |
| Msa0180650 | Msa0444070 | 0.810624 | 1.050653e-50 | -8.615850e-47 |
| Msa0180930 | Msa0444070 | 0.803166 | 3.968567e-49 | -8.615850e-47 |
| Msa0182320 | Msa0444070 | 0.835101 | 2.041691e-56 | -8.615850e-47 |
| Msa0225460 | Msa0444070 | 0.801254 | 9.820369e-49 | -8.615850e-47 |
| Msa0225680 | Msa0444070 | 0.809006 | 2.341994e-50 | -8.615850e-47 |
| Msa0380620 | Msa0444070 | 0.816424 | 5.569820e-52 | -8.615850e-47 |
| Msa0419700 | Msa0444070 | 0.808649 | 2.791312e-50 | -8.615850e-47 |
| Msa0428150 | Msa0444070 | 0.849744 | 2.655999e-60 | -8.615850e-47 |
| Msa0430260 | Msa0444070 | 0.820677 | 6.044056e-53 | -8.615850e-47 |
| Msa0442830 | Msa0444070 | 0.801850 | 7.413083e-49 | -8.615850e-47 |
| Msa0444070 | Msa0462500 | 0.855302 | 6.909906e-62 | -8.615850e-47 |
| Msa0444070 | Msa0472950 | 0.833040 | 6.700174e-56 | -8.615850e-47 |
| Msa0444070 | Msa0483910 | 0.828774 | 7.455852e-55 | -8.615850e-47 |
| Msa0444070 | Msa0500380 | 0.809178 | 2.150943e-50 | -8.615850e-47 |
| Msa0444070 | Msa0517250 | 0.817876 | 2.626438e-52 | -8.615850e-47 |
| Msa0444070 | Msa0532050 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0444070 | Msa0532070 | 0.843412 | 1.424016e-58 | -8.615850e-47 |
| Msa0444070 | Msa0569200 | 0.802478 | 5.504312e-49 | -8.615850e-47 |
| Msa0444070 | Msa0582450 | 0.800593 | 1.340039e-48 | -8.615850e-47 |
| Msa0444070 | Msa0626450 | 0.823428 | 1.392638e-53 | -8.615850e-47 |
| Msa0444070 | Msa0626490 | 0.822869 | 1.880750e-53 | -8.615850e-47 |
| Msa0444070 | Msa0664060 | 0.800104 | 1.685003e-48 | -8.615850e-47 |
| Msa0444070 | Msa0664600 | 0.821609 | 3.686028e-53 | -8.615850e-47 |
| Msa0444070 | Msa0683570 | 0.811348 | 7.324151e-51 | -8.615850e-47 |
| Msa0444070 | Msa0689520 | 0.802483 | 5.491189e-49 | -8.615850e-47 |
| Msa0444070 | Msa0700460 | 0.826821 | 2.197681e-54 | -8.615850e-47 |
| Msa0444070 | Msa0709740 | 0.813348 | 2.678176e-51 | -8.615850e-47 |
| Msa0444070 | Msa0711970 | 0.811389 | 7.175408e-51 | -8.615850e-47 |
| Msa0444070 | Msa0749740 | 0.809928 | 1.484857e-50 | -8.615850e-47 |
| Msa0444070 | Msa0749770 | 0.808093 | 3.668900e-50 | -8.615850e-47 |
| Msa0444070 | Msa0750090 | 0.803733 | 3.028555e-49 | -8.615850e-47 |
| Msa0444070 | Msa0765840 | 0.812737 | 3.646838e-51 | -8.615850e-47 |
| Msa0444070 | Msa0945110 | 0.835391 | 1.724027e-56 | -8.615850e-47 |
| Msa0444070 | Msa0981320 | 0.818309 | 2.096033e-52 | -8.615850e-47 |
| Msa0444070 | Msa1003740 | 0.832768 | 7.828869e-56 | -8.615850e-47 |
| Msa0444070 | Msa1003800 | 0.838211 | 3.289621e-57 | -8.615850e-47 |
| Msa0444070 | Msa1003930 | 0.835941 | 1.251779e-56 | -8.615850e-47 |
| Msa0444070 | Msa1018690 | 0.845006 | 5.315132e-59 | -8.615850e-47 |
| Msa0444070 | Msa1037640 | 0.836616 | 8.430511e-57 | -8.615850e-47 |
| Msa0444070 | Msa1042160 | 0.819162 | 1.342671e-52 | -8.615850e-47 |
| Msa0444070 | Msa1042190 | 0.822554 | 2.225702e-53 | -8.615850e-47 |
| Msa0444070 | Msa1080000 | 0.811068 | 8.422095e-51 | -8.615850e-47 |
| Msa0444070 | Msa1096960 | 0.811197 | 7.895666e-51 | -8.615850e-47 |
| Msa0444070 | Msa1113340 | 0.817148 | 3.831703e-52 | -8.615850e-47 |
| Msa0444070 | Msa1123210 | 0.817875 | 2.628158e-52 | -8.615850e-47 |
| Msa0444070 | Msa1130280 | 0.847859 | 8.857595e-60 | -8.615850e-47 |
| Msa0444070 | Msa1160910 | 0.821276 | 4.401626e-53 | -8.615850e-47 |
| Msa0444070 | Msa1167470 | 0.828321 | 9.594529e-55 | -8.615850e-47 |
| Msa0444070 | Msa1186520 | 0.821257 | 4.446005e-53 | -8.615850e-47 |
| Msa0444070 | Msa1216110 | 0.815324 | 9.802493e-52 | -8.615850e-47 |
| Msa0444070 | Msa1240770 | 0.832999 | 6.861573e-56 | -8.615850e-47 |
| Msa0444070 | Msa1283910 | 0.808576 | 2.893373e-50 | -8.615850e-47 |
| Msa0444070 | Msa1290770 | 0.806836 | 6.780183e-50 | -8.615850e-47 |
| Msa0444070 | Msa1307570 | 0.803576 | 3.263180e-49 | -8.615850e-47 |
| Msa0444070 | Msa1315130 | 0.813786 | 2.146354e-51 | -8.615850e-47 |
| Msa0444070 | Msa1315160 | 0.804294 | 2.314399e-49 | -8.615850e-47 |
| Msa0444070 | Msa1321340 | 0.832473 | 9.264226e-56 | -8.615850e-47 |
| Msa0444070 | Msa1369550 | 0.807085 | 6.004028e-50 | -8.615850e-47 |
| Msa0444070 | Msa1384650 | 0.810793 | 9.659702e-51 | -8.615850e-47 |
| Msa0444070 | Msa1393780 | 0.820234 | 7.639276e-53 | -8.615850e-47 |
| Msa0444070 | Msa1412350 | 0.822758 | 1.995905e-53 | -8.615850e-47 |
| Msa0444070 | Msa1419460 | 0.805919 | 1.057833e-49 | -8.615850e-47 |
| Msa0444070 | Msa1440960 | 0.815580 | 8.594615e-52 | -8.615850e-47 |
| Msa0444070 | Msa1445500 | 0.804491 | 2.106167e-49 | -8.615850e-47 |
| Msa0444070 | Msa1454140 | 0.835914 | 1.271263e-56 | -8.615850e-47 |
| Msa0444070 | Msa1462710 | 0.803361 | 3.616443e-49 | -8.615850e-47 |
| Msa0255090 | Msa0444070 | 0.837965 | 3.807384e-57 | -8.615850e-47 |
| Msa0259380 | Msa0444070 | 0.833732 | 4.504884e-56 | -8.615850e-47 |
| Msa0267110 | Msa0444070 | 0.850866 | 1.286685e-60 | -8.615850e-47 |
| Msa0292330 | Msa0444070 | 0.810995 | 8.736531e-51 | -8.615850e-47 |
| Msa0294160 | Msa0444070 | 0.813342 | 2.687174e-51 | -8.615850e-47 |
| Msa0318700 | Msa0444070 | 0.828269 | 9.873439e-55 | -8.615850e-47 |
| Msa0321920 | Msa0444070 | 0.826161 | 3.157734e-54 | -8.615850e-47 |
| Msa0349710 | Msa0444070 | 0.981112 | 8.388260e-152 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444070 | MtrunA17_Chr3g0083561 | 99.372 | 478 | 3 | 0 | 1 | 478 | 1 | 478 | 0.0 | 968 |
| Msa0444070 | MtrunA17_Chr1g0156541 | 98.536 | 478 | 7 | 0 | 1 | 478 | 1 | 478 | 0.0 | 962 |
| Msa0444070 | MtrunA17_Chr8g0352721 | 84.468 | 470 | 70 | 1 | 7 | 476 | 1 | 467 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444070 | AT3G54470.1 | 77.263 | 475 | 106 | 2 | 5 | 478 | 2 | 475 | 0.0 | 757 |
Find 170 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTTCCTGTTGGATTCT+TGG | 0.162358 | 3_3:+16827138 | None:intergenic |
| TGGAAGAGACAGAGGAAATT+AGG | 0.175139 | 3_3:+16827659 | None:intergenic |
| GCAAGGTGGGCGGGAAAATT+TGG | 0.209823 | 3_3:-16827365 | Msa0444070:CDS |
| GAACATTCCGACTTTGTAAT+TGG | 0.222966 | 3_3:-16825850 | Msa0444070:CDS |
| AAAGACTTGACCTTGGTTAT+TGG | 0.229339 | 3_3:+16827187 | None:intergenic |
| TTGCTTAATCATTGAGGATT+TGG | 0.242028 | 3_3:-16827479 | Msa0444070:CDS |
| CATAAATCCTTCTTTCATTC+AGG | 0.244652 | 3_3:-16825788 | Msa0444070:CDS |
| ACTAATGTGTATTATTCTTT+TGG | 0.249643 | 3_3:+16829791 | None:intergenic |
| GCATTTGTTTCATCAACTTT+AGG | 0.255737 | 3_3:+16824730 | None:intergenic |
| GTGACTGGTGGCGATGGTTT+AGG | 0.260282 | 3_3:-16825745 | Msa0444070:CDS |
| CTGAATGAAAGAAGGATTTA+TGG | 0.267181 | 3_3:+16825789 | None:intergenic |
| AGGTCAAGTCTTTGTCATTT+GGG | 0.286862 | 3_3:-16827177 | Msa0444070:CDS |
| CCAAGGATGGAATGCATATT+TGG | 0.288220 | 3_3:-16824967 | Msa0444070:CDS |
| AAAGAAGTTATTTGAGATAA+TGG | 0.294923 | 3_3:-16827122 | Msa0444070:CDS |
| CCAAATATGCATTCCATCCT+TGG | 0.307382 | 3_3:+16824967 | None:intergenic |
| ATCTGCATTTGAAGAATAAA+AGG | 0.312439 | 3_3:-16824929 | Msa0444070:three_prime_UTR |
| AAGGTCAAGTCTTTGTCATT+TGG | 0.313820 | 3_3:-16827178 | Msa0444070:CDS |
| TTAGGGTCTGCGAGATTTGC+TGG | 0.320828 | 3_3:+16827677 | None:intergenic |
| ATGCAGATCTCAAGCAGATT+TGG | 0.330274 | 3_3:+16824944 | None:intergenic |
| ATCTCCCTTGGCAAGGTTAC+CGG | 0.335912 | 3_3:+16825903 | None:intergenic |
| TACCAGTGGAACATCAGTTT+TGG | 0.340084 | 3_3:-16827455 | Msa0444070:CDS |
| GGCAACTTTAAGCTCAAATC+TGG | 0.343038 | 3_3:-16827757 | Msa0444070:CDS |
| TCTTTCATTCAGGCAACTCC+TGG | 0.349446 | 3_3:-16825778 | Msa0444070:CDS |
| TGACTGGTGGCGATGGTTTA+GGG | 0.363262 | 3_3:-16825744 | Msa0444070:CDS |
| CAAAGTTCTTAGATGAGAAT+AGG | 0.374280 | 3_3:-16827240 | Msa0444070:CDS |
| GTCTTTGTCATTTGGGGAAA+GGG | 0.376781 | 3_3:-16827170 | Msa0444070:CDS |
| CCTCAATGATTAAGCAACTT+TGG | 0.383142 | 3_3:+16827485 | None:intergenic |
| GGAAGAGACAGAGGAAATTA+GGG | 0.389314 | 3_3:+16827660 | None:intergenic |
| GGATCTTTCACATATTAGAT+TGG | 0.390057 | 3_3:-16826139 | Msa0444070:CDS |
| AATTATTAAATTGACTGAAA+TGG | 0.395052 | 3_3:-16827317 | Msa0444070:CDS |
| ACATAACTTCTTAATCTTTG+AGG | 0.401323 | 3_3:-16826309 | Msa0444070:CDS |
| GAGATATCAGCTGTGAAATT+CGG | 0.407178 | 3_3:-16827778 | Msa0444070:CDS |
| ATGTACCCGAGGCCTTCCTC+TGG | 0.411635 | 3_3:+16824855 | None:intergenic |
| TCAAATAACTTCTTTCCTGT+TGG | 0.412197 | 3_3:+16827130 | None:intergenic |
| TTTAGTCCATCCACGATTCC+AGG | 0.414929 | 3_3:+16826083 | None:intergenic |
| GGTGCCCCTGGCCATGATGC+TGG | 0.418736 | 3_3:+16825811 | None:intergenic |
| GATCTTTCACATATTAGATT+GGG | 0.421238 | 3_3:-16826138 | Msa0444070:CDS |
| AGGCTTGAAATCACCTTCAA+TGG | 0.421566 | 3_3:+16827510 | None:intergenic |
| TCAGGGTTTGCCTCGTGGTA+GGG | 0.421932 | 3_3:-16825956 | Msa0444070:intron |
| ATAAGAATATCTCACCTTCT+CGG | 0.427341 | 3_3:+16827033 | None:intergenic |
| AGAAGCTTAGAGCCAAAATC+AGG | 0.428014 | 3_3:+16826572 | None:intergenic |
| CACCTTGCTCTCTATCAATC+AGG | 0.434163 | 3_3:+16827380 | None:intergenic |
| ATCCCTGTAACACACTCAAA+AGG | 0.435173 | 3_3:-16827865 | Msa0444070:five_prime_UTR |
| ATTGAAGGTGATTTCAAGCC+TGG | 0.435970 | 3_3:-16827508 | Msa0444070:CDS |
| GACTTGATGACGAGATGGTA+GGG | 0.437781 | 3_3:-16827270 | Msa0444070:CDS |
| GAAGGAGAGTAATCTGTGTT+TGG | 0.444097 | 3_3:-16827095 | Msa0444070:CDS |
| GTCAATCCAGCATCATGGCC+AGG | 0.449072 | 3_3:-16825817 | Msa0444070:CDS |
| CCAAAATCAGGAGTAAAATC+TGG | 0.451598 | 3_3:+16826584 | None:intergenic |
| GCGGAGATGTTCAACGGCGG+CGG | 0.453557 | 3_3:+16829718 | None:intergenic |
| AGAGAGGGTAGTGAGTAAAC+TGG | 0.456616 | 3_3:+16829746 | None:intergenic |
| GCAATGGGTAAGGCAGTGTA+AGG | 0.460275 | 3_3:+16827610 | None:intergenic |
| TTCCAGGTCGTCCACGATAG+AGG | 0.461238 | 3_3:-16825065 | Msa0444070:intron |
| CCAAAGTTGCTTAATCATTG+AGG | 0.466579 | 3_3:-16827485 | Msa0444070:CDS |
| TCCTTACGACGCATGACCAT+GGG | 0.467155 | 3_3:+16827559 | None:intergenic |
| GGCAACTCCTGGAGTTCAAA+TGG | 0.472058 | 3_3:-16825767 | Msa0444070:CDS |
| ACCTCATTTGATCTTGTATG+TGG | 0.474446 | 3_3:-16827637 | Msa0444070:CDS |
| CGTGGATGGACTAAAATTGA+AGG | 0.484767 | 3_3:-16826075 | Msa0444070:intron |
| TTCCAAAACTGATGTTCCAC+TGG | 0.489744 | 3_3:+16827453 | None:intergenic |
| GTAAATGCTCACATAATCTC+TGG | 0.493470 | 3_3:-16826107 | Msa0444070:CDS |
| TATTCATGAGCTGCCTCAGC+AGG | 0.493515 | 3_3:+16824996 | None:intergenic |
| TGAATGAAAGAAGGATTTAT+GGG | 0.493705 | 3_3:+16825790 | None:intergenic |
| CTGTGTTTGGCTGCAGATGT+TGG | 0.494453 | 3_3:-16827082 | Msa0444070:CDS |
| GACACATGTGGCAATGGGTA+AGG | 0.497143 | 3_3:+16827600 | None:intergenic |
| GCTCACATAATCTCTGGTCC+TGG | 0.498743 | 3_3:-16826101 | Msa0444070:CDS |
| CGGGAAAATTTGGAGGAGAA+TGG | 0.500157 | 3_3:-16827355 | Msa0444070:CDS |
| AAGAGAGACACATGTGGCAA+TGG | 0.500349 | 3_3:+16827594 | None:intergenic |
| TCAATCCAGCATCATGGCCA+GGG | 0.503889 | 3_3:-16825816 | Msa0444070:CDS |
| AGTCTTTGTCATTTGGGGAA+AGG | 0.506387 | 3_3:-16827171 | Msa0444070:CDS |
| GGACATGGCGTCATCATCAT+TGG | 0.506691 | 3_3:-16827827 | Msa0444070:exon |
| CCAGTCACCATTTGAACTCC+AGG | 0.507708 | 3_3:+16825760 | None:intergenic |
| GTCTTCAGCAAGCATATCTC+AGG | 0.509329 | 3_3:+16826623 | None:intergenic |
| CAGGGTTTGCCTCGTGGTAG+GGG | 0.510707 | 3_3:-16825955 | Msa0444070:CDS |
| ACAAATGCAAGCATTGTTTG+AGG | 0.511644 | 3_3:-16824715 | Msa0444070:three_prime_UTR |
| TCCCTGTAACACACTCAAAA+GGG | 0.512375 | 3_3:-16827864 | Msa0444070:five_prime_UTR |
| GTTAGTAACTTATATTGAAG+TGG | 0.513434 | 3_3:-16824808 | Msa0444070:three_prime_UTR |
| ACAGTAACCATGCAATATGC+AGG | 0.513518 | 3_3:-16826260 | Msa0444070:CDS |
| AATCTGTCCAAGAATCCAAC+AGG | 0.514570 | 3_3:-16827145 | Msa0444070:CDS |
| ATGATTAAGCAACTTTGGCC+AGG | 0.515619 | 3_3:+16827490 | None:intergenic |
| TGTAACCCAGAGGAAGGCCT+CGG | 0.519321 | 3_3:-16824861 | Msa0444070:three_prime_UTR |
| AGAGAGACACATGTGGCAAT+GGG | 0.520298 | 3_3:+16827595 | None:intergenic |
| TGGCCATGATGCTGGATTGA+CGG | 0.520423 | 3_3:+16825819 | None:intergenic |
| AGCTGCACCACTACGTTCTG+TGG | 0.521478 | 3_3:-16827428 | Msa0444070:CDS |
| GACATTATCATCGTTGGACG+TGG | 0.523138 | 3_3:-16825038 | Msa0444070:CDS |
| TGATAGAGAGCAAGGTGGGC+GGG | 0.523188 | 3_3:-16827374 | Msa0444070:CDS |
| CCCCATGGTCATGCGTCGTA+AGG | 0.523772 | 3_3:-16827560 | Msa0444070:CDS |
| ATGAATACCGTGTCCAAGGA+TGG | 0.523839 | 3_3:-16824980 | Msa0444070:CDS |
| AGACGGAGGTCAATGTAGAT+TGG | 0.523857 | 3_3:+16827724 | None:intergenic |
| GAAGGATTTATGGGTGCCCC+TGG | 0.524315 | 3_3:+16825799 | None:intergenic |
| GGAAGTGACATTATCATCGT+TGG | 0.524402 | 3_3:-16825044 | Msa0444070:CDS |
| GGCACTGCTAAAGCCATTGA+AGG | 0.527673 | 3_3:-16827523 | Msa0444070:CDS |
| AAGGATAAGATATGATGAGA+CGG | 0.530450 | 3_3:+16827707 | None:intergenic |
| ATTTGAGATAATGGCTCAGA+AGG | 0.531327 | 3_3:-16827113 | Msa0444070:CDS |
| ATTATACTTCTGAAATCAAG+TGG | 0.531448 | 3_3:+16824645 | None:intergenic |
| TCTGGTCCTGGAATCGTGGA+TGG | 0.532929 | 3_3:-16826089 | Msa0444070:CDS |
| CTCAGGGTTTGCCTCGTGGT+AGG | 0.534371 | 3_3:-16825957 | Msa0444070:intron |
| AACGGCGGCGGCGCGGAGAG+AGG | 0.541086 | 3_3:+16829730 | None:intergenic |
| TTCCTTACGACGCATGACCA+TGG | 0.546727 | 3_3:+16827558 | None:intergenic |
| ATTTCACAGCTGATATCTCA+TGG | 0.551164 | 3_3:+16827782 | None:intergenic |
| GATCGTAAATTTGCTGACAT+TGG | 0.551409 | 3_3:-16826287 | Msa0444070:CDS |
| CTTGCTGAAATGAGTTCAGC+CGG | 0.554751 | 3_3:-16825922 | Msa0444070:CDS |
| AGACTTGATGACGAGATGGT+AGG | 0.561737 | 3_3:-16827271 | Msa0444070:CDS |
| GAAGGTTGCAGCTGTGGCAA+AGG | 0.562858 | 3_3:-16827218 | Msa0444070:CDS |
| GAAGCAAAACGGAGCTGCGG+CGG | 0.564367 | 3_3:+16829699 | None:intergenic |
| GAATAGGAAGGTTGCAGCTG+TGG | 0.569252 | 3_3:-16827224 | Msa0444070:CDS |
| AGCAGCAGTATAATCTCCCT+TGG | 0.569550 | 3_3:+16825891 | None:intergenic |
| ATTGAGGATTTGGTTACCAG+TGG | 0.571630 | 3_3:-16827469 | Msa0444070:CDS |
| GCTCATGAATACCGTGTCCA+AGG | 0.571738 | 3_3:-16824984 | Msa0444070:CDS |
| CCTGGAGTTCAAATGGTGAC+TGG | 0.574925 | 3_3:-16825760 | Msa0444070:CDS |
| GTAACCCAGAGGAAGGCCTC+GGG | 0.575667 | 3_3:-16824860 | Msa0444070:three_prime_UTR |
| CGTTGGACGTGGCATCATCA+AGG | 0.576271 | 3_3:-16825027 | Msa0444070:CDS |
| GCTGCACCACTACGTTCTGT+GGG | 0.576410 | 3_3:-16827427 | Msa0444070:CDS |
| TATGAAGCCAATTACAAAGT+CGG | 0.577391 | 3_3:+16825843 | None:intergenic |
| TATCCGTCAATCCAGCATCA+TGG | 0.578292 | 3_3:-16825822 | Msa0444070:CDS |
| GGTCAAGTCTTTGTCATTTG+GGG | 0.580836 | 3_3:-16827176 | Msa0444070:CDS |
| CAAATGGTGACTGGTGGCGA+TGG | 0.583195 | 3_3:-16825751 | Msa0444070:CDS |
| GAGATTTGCTGGAGGAGAGA+AGG | 0.583230 | 3_3:+16827688 | None:intergenic |
| GGAGTTGCCTGAATGAAAGA+AGG | 0.584092 | 3_3:+16825781 | None:intergenic |
| AATCTCTGGTCCTGGAATCG+TGG | 0.585281 | 3_3:-16826093 | Msa0444070:CDS |
| TTCAGCCGGTAACCTTGCCA+AGG | 0.587283 | 3_3:-16825908 | Msa0444070:CDS |
| GTACCTCGGTTGAAGCAAAA+CGG | 0.587506 | 3_3:+16829688 | None:intergenic |
| ACGGCGGCGGCGCGGAGAGA+GGG | 0.588070 | 3_3:+16829731 | None:intergenic |
| GTTCTTAGATGAGAATAGGA+AGG | 0.589757 | 3_3:-16827236 | Msa0444070:CDS |
| GAATATTATTTGTGAGGACA+TGG | 0.590923 | 3_3:-16827842 | Msa0444070:exon |
| TGTACCCGAGGCCTTCCTCT+GGG | 0.595293 | 3_3:+16824856 | None:intergenic |
| AAAAGGGAATATTATTTGTG+AGG | 0.598684 | 3_3:-16827848 | Msa0444070:five_prime_UTR |
| TGGAAGACTTGATGACGAGA+TGG | 0.604205 | 3_3:-16827275 | Msa0444070:CDS |
| ACTTGATGACGAGATGGTAG+GGG | 0.608317 | 3_3:-16827269 | Msa0444070:CDS |
| TAATGTCACTTCCTCTATCG+TGG | 0.612294 | 3_3:+16825054 | None:intergenic |
| GTCCTGATTGATAGAGAGCA+AGG | 0.612462 | 3_3:-16827382 | Msa0444070:CDS |
| ACTATACCCTGCATATTGCA+TGG | 0.614445 | 3_3:+16826253 | None:intergenic |
| ATTGCTTGAAATTGCCGAGA+AGG | 0.616911 | 3_3:-16827047 | Msa0444070:intron |
| CGTAAGGAAGTCAAAGACTA+CGG | 0.621272 | 3_3:-16827544 | Msa0444070:CDS |
| CAGTATAATCTCCCTTGGCA+AGG | 0.623016 | 3_3:+16825896 | None:intergenic |
| AGGTGGGCGGGAAAATTTGG+AGG | 0.623527 | 3_3:-16827362 | Msa0444070:CDS |
| ACCACATACAAGATCAAATG+AGG | 0.625670 | 3_3:+16827636 | None:intergenic |
| AAATGACAAAGACTTGACCT+TGG | 0.633719 | 3_3:+16827180 | None:intergenic |
| TCTTGCTCAGAGTATCCCCA+TGG | 0.636931 | 3_3:-16827575 | Msa0444070:CDS |
| GCTGCGGCGGAGATGTTCAA+CGG | 0.637145 | 3_3:+16829712 | None:intergenic |
| ATGCTTGCTGAAGACTCATG+TGG | 0.637264 | 3_3:-16826615 | Msa0444070:CDS |
| CAATCCAGCATCATGGCCAG+GGG | 0.638220 | 3_3:-16825815 | Msa0444070:CDS |
| TTGATAGAGAGCAAGGTGGG+CGG | 0.643970 | 3_3:-16827375 | Msa0444070:CDS |
| GATGTTCAACGGCGGCGGCG+CGG | 0.644191 | 3_3:+16829723 | None:intergenic |
| CAAGGCAGCAAATCCTGCTG+AGG | 0.645766 | 3_3:-16825009 | Msa0444070:CDS |
| AAATGAGGTGGAAGAGACAG+AGG | 0.646361 | 3_3:+16827651 | None:intergenic |
| TGATTGATAGAGAGCAAGGT+GGG | 0.648024 | 3_3:-16827378 | Msa0444070:CDS |
| ACATACAAGATCAAATGAGG+TGG | 0.650465 | 3_3:+16827639 | None:intergenic |
| TGCTGCATTGAAAATTGCTG+AGG | 0.652056 | 3_3:-16825872 | Msa0444070:CDS |
| CAGTAACCATGCAATATGCA+GGG | 0.653666 | 3_3:-16826259 | Msa0444070:intron |
| ACTGGAGGTCGAGTGTTCAG+TGG | 0.654539 | 3_3:+16829764 | None:intergenic |
| TTTCACTGTAACCCAGAGGA+AGG | 0.654967 | 3_3:-16824867 | Msa0444070:three_prime_UTR |
| ATGCATTCCATCCTTGGACA+CGG | 0.656504 | 3_3:+16824973 | None:intergenic |
| GGTTGAGAAGCCAATAACCA+AGG | 0.658377 | 3_3:-16827197 | Msa0444070:CDS |
| CATACTCAGGGTTTGCCTCG+TGG | 0.665328 | 3_3:-16825961 | Msa0444070:intron |
| TCAGCCGGTAACCTTGCCAA+GGG | 0.668243 | 3_3:-16825907 | Msa0444070:CDS |
| GAGGGTAGTGAGTAAACTGG+AGG | 0.669671 | 3_3:+16829749 | None:intergenic |
| TCAACATTATAATGTACCCG+AGG | 0.672281 | 3_3:+16824844 | None:intergenic |
| CAATGGGTAAGGCAGTGTAA+GGG | 0.675950 | 3_3:+16827611 | None:intergenic |
| GTTGAAGCAAAACGGAGCTG+CGG | 0.680017 | 3_3:+16829696 | None:intergenic |
| CCTTACGACGCATGACCATG+GGG | 0.683791 | 3_3:+16827560 | None:intergenic |
| GCGGCGGAGATGTTCAACGG+CGG | 0.692761 | 3_3:+16829715 | None:intergenic |
| GGAGTTCAAATGGTGACTGG+TGG | 0.701669 | 3_3:-16825757 | Msa0444070:CDS |
| GATAAGATATGATGAGACGG+AGG | 0.705591 | 3_3:+16827710 | None:intergenic |
| TTCAACCCCACAGAACGTAG+TGG | 0.709421 | 3_3:+16827421 | None:intergenic |
| CTGCACCACTACGTTCTGTG+GGG | 0.713121 | 3_3:-16827426 | Msa0444070:CDS |
| GGGTCTGCGAGATTTGCTGG+AGG | 0.719216 | 3_3:+16827680 | None:intergenic |
| AGCAATAGTCCCCTACCACG+AGG | 0.719710 | 3_3:+16825946 | None:intergenic |
| CTAATTTCACTGTAACCCAG+AGG | 0.724449 | 3_3:-16824871 | Msa0444070:three_prime_UTR |
| CTGATTGATAGAGAGCAAGG+TGG | 0.725576 | 3_3:-16827379 | Msa0444070:CDS |
| CTGAGCAAGAGAGACACATG+TGG | 0.763908 | 3_3:+16827588 | None:intergenic |
| GGGGTTGAAGATCAGTGACG+CGG | 0.777219 | 3_3:-16827407 | Msa0444070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATAATAAATATTATAA+TGG | + | chr3_3:16828414-16828433 | None:intergenic | 0.0% |
| !!! | CATTTTTCTTATATTATTAT+TGG | - | chr3_3:16824961-16824980 | Msa0444070:CDS | 10.0% |
| !!! | TGTTTTTTTATAAAAAAGAA+AGG | - | chr3_3:16829769-16829788 | Msa0444070:five_prime_UTR | 10.0% |
| !!! | AGAATATTTAAAACTTGTTT+TGG | - | chr3_3:16825082-16825101 | Msa0444070:intron | 15.0% |
| !! | TGATATTCAATAATTATGTA+TGG | - | chr3_3:16825434-16825453 | Msa0444070:intron | 15.0% |
| !!! | AAAAATCAGTTTTTTTAACA+TGG | - | chr3_3:16825642-16825661 | Msa0444070:intron | 15.0% |
| !!! | TGTTTTTTAAATTTGTATTG+TGG | - | chr3_3:16826197-16826216 | Msa0444070:intron | 15.0% |
| !! | AATTATTAAATTGACTGAAA+TGG | - | chr3_3:16827127-16827146 | Msa0444070:CDS | 15.0% |
| !! | TTAGTTAAAAGACAAATAAT+TGG | + | chr3_3:16827773-16827792 | None:intergenic | 15.0% |
| !! | TTATAAAAAAACAAAATGAC+AGG | + | chr3_3:16829762-16829781 | None:intergenic | 15.0% |
| !! | AAAAATCACACAAAAATGTA+TGG | + | chr3_3:16825124-16825143 | None:intergenic | 20.0% |
| !! | ATTCAATAATTATGTATGGA+TGG | - | chr3_3:16825438-16825457 | Msa0444070:intron | 20.0% |
| !! | AATATTGTTTCAGATGATTA+TGG | - | chr3_3:16825856-16825875 | Msa0444070:CDS | 20.0% |
| !! | AAGTAGTTCAAAATTCAAAT+TGG | + | chr3_3:16825958-16825977 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTATAAGATGAGA+AGG | - | chr3_3:16826079-16826098 | Msa0444070:CDS | 20.0% |
| !! | TAAAGTAGAATAACAAAAAG+TGG | + | chr3_3:16826266-16826285 | None:intergenic | 20.0% |
| !!! | TTGTTATTCTACTTTATGAA+TGG | - | chr3_3:16826270-16826289 | Msa0444070:CDS | 20.0% |
| !!! | TTAAAATTTTAAGCACCTAA+GGG | + | chr3_3:16826455-16826474 | None:intergenic | 20.0% |
| !!! | AAAGAAGTTATTTGAGATAA+TGG | - | chr3_3:16827322-16827341 | Msa0444070:CDS | 20.0% |
| !! | TCACAATATTATGTACTAAA+TGG | + | chr3_3:16827661-16827680 | None:intergenic | 20.0% |
| !! | TAAAAGACAAATAATTGGTA+TGG | + | chr3_3:16827768-16827787 | None:intergenic | 20.0% |
| !! | GACTAATTGTCAATAATATT+AGG | + | chr3_3:16827949-16827968 | None:intergenic | 20.0% |
| !! | AAAATAGAACAATGTCATAT+TGG | + | chr3_3:16828272-16828291 | None:intergenic | 20.0% |
| !!! | TTCTATTTTAATATCTACAG+AGG | - | chr3_3:16828283-16828302 | Msa0444070:intron | 20.0% |
| !!! | TCTATTTTAATATCTACAGA+GGG | - | chr3_3:16828284-16828303 | Msa0444070:intron | 20.0% |
| !! | TACATATATATATCACCATT+AGG | - | chr3_3:16828986-16829005 | Msa0444070:intron | 20.0% |
| !!! | AATAGTCTTGATACTTAAAA+AGG | + | chr3_3:16829084-16829103 | None:intergenic | 20.0% |
| !!! | CAAGACTATTTATTTTTCTT+TGG | - | chr3_3:16829094-16829113 | Msa0444070:intron | 20.0% |
| !!! | TTTGAGCGAAAAGTTTTAAA+TGG | + | chr3_3:16824845-16824864 | None:intergenic | 25.0% |
| ! | ACAGATTATTTGCATAAAAG+TGG | - | chr3_3:16825150-16825169 | Msa0444070:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr3_3:16825321-16825340 | None:intergenic | 25.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | - | chr3_3:16825369-16825388 | Msa0444070:intron | 25.0% |
| !! | TTTTATAATCCGTAACAAAC+CGG | + | chr3_3:16825406-16825425 | None:intergenic | 25.0% |
| !! | TTTTATAAGATGAGAAGGAA+AGG | - | chr3_3:16826084-16826103 | Msa0444070:CDS | 25.0% |
| !!! | AAAGGATTTTTTTGGTGAAA+TGG | - | chr3_3:16826102-16826121 | Msa0444070:CDS | 25.0% |
| !!! | AAGGATTTTTTTGGTGAAAT+GGG | - | chr3_3:16826103-16826122 | Msa0444070:CDS | 25.0% |
| !!! | ATGTTTGTTAATGTTTTGCT+TGG | - | chr3_3:16826152-16826171 | Msa0444070:intron | 25.0% |
| ! | TTCTACTTTATGAATGGTAT+AGG | - | chr3_3:16826276-16826295 | Msa0444070:CDS | 25.0% |
| !! | CTTAAAATTTTAAGCACCTA+AGG | + | chr3_3:16826456-16826475 | None:intergenic | 25.0% |
| ! | AAAAGGGAATATTATTTGTG+AGG | - | chr3_3:16826596-16826615 | Msa0444070:CDS | 25.0% |
| !! | TGAAATGGTGAAAATTTTGA+GGG | - | chr3_3:16827142-16827161 | Msa0444070:CDS | 25.0% |
| !!! | TTTGTCTAATTTTTTCTGAC+AGG | - | chr3_3:16827793-16827812 | Msa0444070:CDS | 25.0% |
| ! | GTCAATAATATTAGGATGAA+AGG | + | chr3_3:16827941-16827960 | None:intergenic | 25.0% |
| ! | TTCAACTTTCAATAAATGCT+AGG | + | chr3_3:16827985-16828004 | None:intergenic | 25.0% |
| ! | ACATAACTTCTTAATCTTTG+AGG | - | chr3_3:16828135-16828154 | Msa0444070:intron | 25.0% |
| ! | GATCTTTCACATATTAGATT+GGG | - | chr3_3:16828306-16828325 | Msa0444070:intron | 25.0% |
| ! | TGAATGAAAGAAGGATTTAT+GGG | + | chr3_3:16828657-16828676 | None:intergenic | 25.0% |
| ! | ATGCAAAAACTTACAGAATA+TGG | + | chr3_3:16828741-16828760 | None:intergenic | 25.0% |
| ! | GCAAATGAGTAAAAGATTTA+TGG | + | chr3_3:16828768-16828787 | None:intergenic | 25.0% |
| !! | AAATCTTTTACTCATTTGCT+TGG | - | chr3_3:16828769-16828788 | Msa0444070:intron | 25.0% |
| !! | AATCTTTTACTCATTTGCTT+GGG | - | chr3_3:16828770-16828789 | Msa0444070:intron | 25.0% |
| ! | ATAAGTATGATCAAGTAGTA+TGG | - | chr3_3:16828793-16828812 | Msa0444070:intron | 25.0% |
| !! | TAAGTGTTGTTAAGATATTC+TGG | - | chr3_3:16828948-16828967 | Msa0444070:intron | 25.0% |
| ! | ATATATATCACCATTAGGAT+AGG | - | chr3_3:16828991-16829010 | Msa0444070:intron | 25.0% |
| ! | CTAAACAGCAGAAATATAAT+AGG | + | chr3_3:16829121-16829140 | None:intergenic | 25.0% |
| ! | CTTATATTTCTCTTACATCT+TGG | - | chr3_3:16829198-16829217 | Msa0444070:intron | 25.0% |
| ! | ATTTCAACACAAAGTTTAAG+AGG | + | chr3_3:16829257-16829276 | None:intergenic | 25.0% |
| !! | TTAACAAAATGTTCTTTTCC+AGG | - | chr3_3:16829363-16829382 | Msa0444070:intron | 25.0% |
| ! | ATCTGCATTTGAAGAATAAA+AGG | - | chr3_3:16829515-16829534 | Msa0444070:intron | 25.0% |
| !!! | GAGTCAAAATTATGTTTTTG+CGG | - | chr3_3:16829540-16829559 | Msa0444070:intron | 25.0% |
| !!! | AGTCAAAATTATGTTTTTGC+GGG | - | chr3_3:16829541-16829560 | Msa0444070:intron | 25.0% |
| ! | GTTAGTAACTTATATTGAAG+TGG | - | chr3_3:16829636-16829655 | Msa0444070:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | - | chr3_3:16825370-16825389 | Msa0444070:intron | 30.0% | |
| CTCACTCGAAAATTGATTAA+GGG | + | chr3_3:16825474-16825493 | None:intergenic | 30.0% | |
| TCTCACTCGAAAATTGATTA+AGG | + | chr3_3:16825475-16825494 | None:intergenic | 30.0% | |
| CTCTATTCAATAACTATGGA+TGG | + | chr3_3:16825503-16825522 | None:intergenic | 30.0% | |
| TCCATAGTTATTGAATAGAG+TGG | - | chr3_3:16825503-16825522 | Msa0444070:intron | 30.0% | |
| CCATAGTTATTGAATAGAGT+GGG | - | chr3_3:16825504-16825523 | Msa0444070:intron | 30.0% | |
| !! | TGAAGAACAAACTTTTTCTG+AGG | - | chr3_3:16825766-16825785 | Msa0444070:CDS | 30.0% |
| ACAAACAATAGGCGATATAA+AGG | + | chr3_3:16825989-16826008 | None:intergenic | 30.0% | |
| !!! | TGAGAAGGAAAGGATTTTTT+TGG | - | chr3_3:16826094-16826113 | Msa0444070:CDS | 30.0% |
| !!! | AGGATTTTTTTGGTGAAATG+GGG | - | chr3_3:16826104-16826123 | Msa0444070:CDS | 30.0% |
| ! | TGTTTTGCTTGGTTGAAATA+TGG | - | chr3_3:16826163-16826182 | Msa0444070:intron | 30.0% |
| TATGATATCATCCATGATGT+GGG | - | chr3_3:16826399-16826418 | Msa0444070:intron | 30.0% | |
| GCATGAATGTAAAAATGCAA+AGG | + | chr3_3:16826495-16826514 | None:intergenic | 30.0% | |
| GAATATTATTTGTGAGGACA+TGG | - | chr3_3:16826602-16826621 | Msa0444070:CDS | 30.0% | |
| AAGGATAAGATATGATGAGA+CGG | + | chr3_3:16826740-16826759 | None:intergenic | 30.0% | |
| TTGCTTAATCATTGAGGATT+TGG | - | chr3_3:16826965-16826984 | Msa0444070:intron | 30.0% | |
| ! | CTGAAATGGTGAAAATTTTG+AGG | - | chr3_3:16827141-16827160 | Msa0444070:CDS | 30.0% |
| CAAAGTTCTTAGATGAGAAT+AGG | - | chr3_3:16827204-16827223 | Msa0444070:CDS | 30.0% | |
| TCAAATAACTTCTTTCCTGT+TGG | + | chr3_3:16827317-16827336 | None:intergenic | 30.0% | |
| ATAAGAATATCTCACCTTCT+CGG | + | chr3_3:16827414-16827433 | None:intergenic | 30.0% | |
| ! | AAGAGAGAAAACAACTTTTG+TGG | + | chr3_3:16827495-16827514 | None:intergenic | 30.0% |
| ! | ATACATGACTCTTTCAAGTA+TGG | + | chr3_3:16827518-16827537 | None:intergenic | 30.0% |
| ATCATCAACTAGATTGTAAG+TGG | - | chr3_3:16827551-16827570 | Msa0444070:CDS | 30.0% | |
| AGCTTCTATTTAACAACACT+AGG | + | chr3_3:16827585-16827604 | None:intergenic | 30.0% | |
| !!! | TCTAATTTTTTCTGACAGGT+TGG | - | chr3_3:16827797-16827816 | Msa0444070:CDS | 30.0% |
| TATGTTTGTGTGAAGTTCTA+AGG | - | chr3_3:16828046-16828065 | Msa0444070:intron | 30.0% | |
| ! | TAAGGAATCTTTTACGTTTC+TGG | - | chr3_3:16828064-16828083 | Msa0444070:intron | 30.0% |
| GTTTCTCTGCAATCTTTAAT+AGG | + | chr3_3:16828117-16828136 | None:intergenic | 30.0% | |
| ATGAGGAATCTAGAAAGAAA+AGG | + | chr3_3:16828237-16828256 | None:intergenic | 30.0% | |
| GGATCTTTCACATATTAGAT+TGG | - | chr3_3:16828305-16828324 | Msa0444070:intron | 30.0% | |
| TATGAAGCCAATTACAAAGT+CGG | + | chr3_3:16828604-16828623 | None:intergenic | 30.0% | |
| CTGAATGAAAGAAGGATTTA+TGG | + | chr3_3:16828658-16828677 | None:intergenic | 30.0% | |
| CATAAATCCTTCTTTCATTC+AGG | - | chr3_3:16828656-16828675 | Msa0444070:intron | 30.0% | |
| ! | CATTTTCAATGTTGATACAG+AGG | + | chr3_3:16828914-16828933 | None:intergenic | 30.0% |
| ! | TCTTTTCTTTCCTATCCTAA+TGG | + | chr3_3:16829004-16829023 | None:intergenic | 30.0% |
| AGAATAAATTCTTCGTTTGC+TGG | - | chr3_3:16829027-16829046 | Msa0444070:intron | 30.0% | |
| ! | CAAAACAAATTAGCTTCACA+AGG | + | chr3_3:16829057-16829076 | None:intergenic | 30.0% |
| CAAAGTTTAAGAGGTTGAAT+GGG | + | chr3_3:16829248-16829267 | None:intergenic | 30.0% | |
| ACAAAGTTTAAGAGGTTGAA+TGG | + | chr3_3:16829249-16829268 | None:intergenic | 30.0% | |
| GCATTTGTTTCATCAACTTT+AGG | + | chr3_3:16829717-16829736 | None:intergenic | 30.0% | |
| CCCACTCTATTCAATAACTA+TGG | + | chr3_3:16825507-16825526 | None:intergenic | 35.0% | |
| TTAAGCACAGTGCACAAAAA+GGG | - | chr3_3:16825742-16825761 | Msa0444070:CDS | 35.0% | |
| !!! | CTCTGGCGTATTTTTGTTTT+TGG | - | chr3_3:16825794-16825813 | Msa0444070:CDS | 35.0% |
| ATGTAGCAAGCAAGCAATTA+AGG | - | chr3_3:16825820-16825839 | Msa0444070:CDS | 35.0% | |
| ACTGTGAATAGCTCAAACAA+TGG | + | chr3_3:16825931-16825950 | None:intergenic | 35.0% | |
| AAGCAATGTGCACAAACAAT+AGG | + | chr3_3:16826000-16826019 | None:intergenic | 35.0% | |
| CTATGATATCATCCATGATG+TGG | - | chr3_3:16826398-16826417 | Msa0444070:intron | 35.0% | |
| TCTTTGTCATCATATCCCTT+AGG | - | chr3_3:16826437-16826456 | Msa0444070:intron | 35.0% | |
| ATTTCACAGCTGATATCTCA+TGG | + | chr3_3:16826665-16826684 | None:intergenic | 35.0% | |
| GAGATATCAGCTGTGAAATT+CGG | - | chr3_3:16826666-16826685 | Msa0444070:intron | 35.0% | |
| ACATACAAGATCAAATGAGG+TGG | + | chr3_3:16826808-16826827 | None:intergenic | 35.0% | |
| ACCTCATTTGATCTTGTATG+TGG | - | chr3_3:16826807-16826826 | Msa0444070:intron | 35.0% | |
| ACCACATACAAGATCAAATG+AGG | + | chr3_3:16826811-16826830 | None:intergenic | 35.0% | |
| CCTCAATGATTAAGCAACTT+TGG | + | chr3_3:16826962-16826981 | None:intergenic | 35.0% | |
| CCAAAGTTGCTTAATCATTG+AGG | - | chr3_3:16826959-16826978 | Msa0444070:intron | 35.0% | |
| !! | GTGAAAATTTTGAGGGATCA+TGG | - | chr3_3:16827149-16827168 | Msa0444070:CDS | 35.0% |
| GTTCTTAGATGAGAATAGGA+AGG | - | chr3_3:16827208-16827227 | Msa0444070:CDS | 35.0% | |
| AAAGACTTGACCTTGGTTAT+TGG | + | chr3_3:16827260-16827279 | None:intergenic | 35.0% | |
| AAATGACAAAGACTTGACCT+TGG | + | chr3_3:16827267-16827286 | None:intergenic | 35.0% | |
| AAGGTCAAGTCTTTGTCATT+TGG | - | chr3_3:16827266-16827285 | Msa0444070:CDS | 35.0% | |
| ! | AGGTCAAGTCTTTGTCATTT+GGG | - | chr3_3:16827267-16827286 | Msa0444070:CDS | 35.0% |
| ! | ATTTGAGATAATGGCTCAGA+AGG | - | chr3_3:16827331-16827350 | Msa0444070:CDS | 35.0% |
| ! | GAATTCCTCTTTTACATGAG+AGG | + | chr3_3:16827449-16827468 | None:intergenic | 35.0% |
| TGAAAGAGTCATGTATTCTC+TGG | - | chr3_3:16827522-16827541 | Msa0444070:CDS | 35.0% | |
| ATCAACTAGATTGTAAGTGG+TGG | - | chr3_3:16827554-16827573 | Msa0444070:CDS | 35.0% | |
| ATGTACTAAATGGCGTATCA+CGG | + | chr3_3:16827651-16827670 | None:intergenic | 35.0% | |
| CCAAAATCAGGAGTAAAATC+TGG | + | chr3_3:16827863-16827882 | None:intergenic | 35.0% | |
| ! | CCAGATTTTACTCCTGATTT+TGG | - | chr3_3:16827860-16827879 | Msa0444070:five_prime_UTR | 35.0% |
| GGCAAAAACATGAACAGAAT+AGG | + | chr3_3:16827920-16827939 | None:intergenic | 35.0% | |
| !!! | CTTTTACGTTTCTGGTTTAG+TGG | - | chr3_3:16828072-16828091 | Msa0444070:intron | 35.0% |
| !! | GATCGTAAATTTGCTGACAT+TGG | - | chr3_3:16828157-16828176 | Msa0444070:intron | 35.0% |
| AGATTCCTCATCTGTATCTA+AGG | - | chr3_3:16828246-16828265 | Msa0444070:intron | 35.0% | |
| GTAAATGCTCACATAATCTC+TGG | - | chr3_3:16828337-16828356 | Msa0444070:intron | 35.0% | |
| ATGTTTCTTGAACCATACTC+AGG | - | chr3_3:16828470-16828489 | Msa0444070:intron | 35.0% | |
| TGTTTCTTGAACCATACTCA+GGG | - | chr3_3:16828471-16828490 | Msa0444070:intron | 35.0% | |
| GAACATTCCGACTTTGTAAT+TGG | - | chr3_3:16828594-16828613 | Msa0444070:intron | 35.0% | |
| TAGACTGACAGTAACTCATT+TGG | - | chr3_3:16828825-16828844 | Msa0444070:intron | 35.0% | |
| AGTAACTCATTTGGACGAAA+AGG | - | chr3_3:16828834-16828853 | Msa0444070:intron | 35.0% | |
| GTAACTCATTTGGACGAAAA+GGG | - | chr3_3:16828835-16828854 | Msa0444070:intron | 35.0% | |
| TAACTCATTTGGACGAAAAG+GGG | - | chr3_3:16828836-16828855 | Msa0444070:intron | 35.0% | |
| TTAAGATATTCTGGTCCTTC+AGG | - | chr3_3:16828957-16828976 | Msa0444070:intron | 35.0% | |
| TAAGATATTCTGGTCCTTCA+GGG | - | chr3_3:16828958-16828977 | Msa0444070:intron | 35.0% | |
| ATATATGTATTAGCCCCTGA+AGG | + | chr3_3:16828975-16828994 | None:intergenic | 35.0% | |
| AACAATTCTATCACGAGCTT+TGG | - | chr3_3:16829159-16829178 | Msa0444070:intron | 35.0% | |
| TCTTGGTTGTGTTATAGAGA+TGG | - | chr3_3:16829215-16829234 | Msa0444070:intron | 35.0% | |
| TCAACATTATAATGTACCCG+AGG | + | chr3_3:16829603-16829622 | None:intergenic | 35.0% | |
| ! | AGTGGCTTTTTGATGTTCTT+TGG | - | chr3_3:16829654-16829673 | Msa0444070:intron | 35.0% |
| ! | ACAAATGCAAGCATTGTTTG+AGG | - | chr3_3:16829729-16829748 | Msa0444070:five_prime_UTR | 35.0% |
| AGATAGAGATAGAGAGAGAG+AGG | + | chr3_3:16824781-16824800 | None:intergenic | 40.0% | |
| AGCGAAACAGAGAGATAACA+GGG | + | chr3_3:16824810-16824829 | None:intergenic | 40.0% | |
| AAGCGAAACAGAGAGATAAC+AGG | + | chr3_3:16824811-16824830 | None:intergenic | 40.0% | |
| ATCGGATGCATGTGTAGAAA+AGG | - | chr3_3:16825026-16825045 | Msa0444070:CDS | 40.0% | |
| !!! | AAAGTGGTTTTGTCGCTGTT+CGG | - | chr3_3:16825166-16825185 | Msa0444070:intron | 40.0% |
| TCTTTCAAACGTTGTGTGCT+TGG | + | chr3_3:16825545-16825564 | None:intergenic | 40.0% | |
| ! | CTTTTTGTGCACTGTGCTTA+AGG | + | chr3_3:16825743-16825762 | None:intergenic | 40.0% |
| CTTAAGCACAGTGCACAAAA+AGG | - | chr3_3:16825741-16825760 | Msa0444070:CDS | 40.0% | |
| AGTGATGAAACTCGAGACAA+AGG | + | chr3_3:16826023-16826042 | None:intergenic | 40.0% | |
| TTCATCACTGTGGGTGTATT+TGG | - | chr3_3:16826034-16826053 | Msa0444070:intron | 40.0% | |
| TGAGGATGAATGCATCTATG+TGG | - | chr3_3:16826331-16826350 | Msa0444070:intron | 40.0% | |
| GAATGCATCTATGTGGTTTC+TGG | - | chr3_3:16826338-16826357 | Msa0444070:intron | 40.0% | |
| ATCATAACACTCCCACATCA+TGG | + | chr3_3:16826413-16826432 | None:intergenic | 40.0% | |
| TCATGCACACTGAATAACAC+AGG | - | chr3_3:16826542-16826561 | Msa0444070:intron | 40.0% | |
| ATCCCTGTAACACACTCAAA+AGG | - | chr3_3:16826579-16826598 | Msa0444070:CDS | 40.0% | |
| TCCCTGTAACACACTCAAAA+GGG | - | chr3_3:16826580-16826599 | Msa0444070:CDS | 40.0% | |
| !! | TCCCTTTTGAGTGTGTTACA+GGG | + | chr3_3:16826584-16826603 | None:intergenic | 40.0% |
| !! | TTCCCTTTTGAGTGTGTTAC+AGG | + | chr3_3:16826585-16826604 | None:intergenic | 40.0% |
| GGCAACTTTAAGCTCAAATC+TGG | - | chr3_3:16826687-16826706 | Msa0444070:intron | 40.0% | |
| GATAAGATATGATGAGACGG+AGG | + | chr3_3:16826737-16826756 | None:intergenic | 40.0% | |
| GGAAGAGACAGAGGAAATTA+GGG | + | chr3_3:16826787-16826806 | None:intergenic | 40.0% | |
| TGGAAGAGACAGAGGAAATT+AGG | + | chr3_3:16826788-16826807 | None:intergenic | 40.0% | |
| CGTAAGGAAGTCAAAGACTA+CGG | - | chr3_3:16826900-16826919 | Msa0444070:intron | 40.0% | |
| AGGCTTGAAATCACCTTCAA+TGG | + | chr3_3:16826937-16826956 | None:intergenic | 40.0% | |
| ATTGAAGGTGATTTCAAGCC+TGG | - | chr3_3:16826936-16826955 | Msa0444070:intron | 40.0% | |
| ATGATTAAGCAACTTTGGCC+AGG | + | chr3_3:16826957-16826976 | None:intergenic | 40.0% | |
| ! | ATTGAGGATTTGGTTACCAG+TGG | - | chr3_3:16826975-16826994 | Msa0444070:intron | 40.0% |
| ! | TACCAGTGGAACATCAGTTT+TGG | - | chr3_3:16826989-16827008 | Msa0444070:intron | 40.0% |
| TTCCAAAACTGATGTTCCAC+TGG | + | chr3_3:16826994-16827013 | None:intergenic | 40.0% | |
| TGATTGATAGAGAGCAAGGT+GGG | - | chr3_3:16827066-16827085 | Msa0444070:CDS | 40.0% | |
| ! | GGTCAAGTCTTTGTCATTTG+GGG | - | chr3_3:16827268-16827287 | Msa0444070:CDS | 40.0% |
| ! | AGTCTTTGTCATTTGGGGAA+AGG | - | chr3_3:16827273-16827292 | Msa0444070:CDS | 40.0% |
| ! | GTCTTTGTCATTTGGGGAAA+GGG | - | chr3_3:16827274-16827293 | Msa0444070:CDS | 40.0% |
| AATCTGTCCAAGAATCCAAC+AGG | - | chr3_3:16827299-16827318 | Msa0444070:CDS | 40.0% | |
| CTTCTTTCCTGTTGGATTCT+TGG | + | chr3_3:16827309-16827328 | None:intergenic | 40.0% | |
| GAAGGAGAGTAATCTGTGTT+TGG | - | chr3_3:16827349-16827368 | Msa0444070:CDS | 40.0% | |
| ATTGCTTGAAATTGCCGAGA+AGG | - | chr3_3:16827397-16827416 | Msa0444070:CDS | 40.0% | |
| TGAAGCCTCTCATGTAAAAG+AGG | - | chr3_3:16827441-16827460 | Msa0444070:CDS | 40.0% | |
| CTAGATTGTAAGTGGTGGTT+TGG | - | chr3_3:16827559-16827578 | Msa0444070:CDS | 40.0% | |
| TTGTGAAATAGCAGCTAGAG+TGG | - | chr3_3:16827675-16827694 | Msa0444070:CDS | 40.0% | |
| AGAAGCTTAGAGCCAAAATC+AGG | + | chr3_3:16827875-16827894 | None:intergenic | 40.0% | |
| !!! | TTTTGGCTCTAAGCTTCTCT+CGG | - | chr3_3:16827877-16827896 | Msa0444070:five_prime_UTR | 40.0% |
| ACAGTAACCATGCAATATGC+AGG | - | chr3_3:16828184-16828203 | Msa0444070:intron | 40.0% | |
| CAGTAACCATGCAATATGCA+GGG | - | chr3_3:16828185-16828204 | Msa0444070:intron | 40.0% | |
| ACTATACCCTGCATATTGCA+TGG | + | chr3_3:16828194-16828213 | None:intergenic | 40.0% | |
| !! | ATTGGCCTTAGATACAGATG+AGG | + | chr3_3:16828254-16828273 | None:intergenic | 40.0% |
| !! | CGTGGATGGACTAAAATTGA+AGG | - | chr3_3:16828369-16828388 | Msa0444070:intron | 40.0% |
| TGCTGCATTGAAAATTGCTG+AGG | - | chr3_3:16828572-16828591 | Msa0444070:intron | 40.0% | |
| CTGATCTTAAGATGGTACAG+TGG | + | chr3_3:16828874-16828893 | None:intergenic | 40.0% | |
| ACCATCTTAAGATCAGACAG+AGG | - | chr3_3:16828878-16828897 | Msa0444070:intron | 40.0% | |
| TTAAGATCAGACAGAGGCTT+AGG | - | chr3_3:16828884-16828903 | Msa0444070:intron | 40.0% | |
| AAGATATTCTGGTCCTTCAG+GGG | - | chr3_3:16828959-16828978 | Msa0444070:intron | 40.0% | |
| ! | TAATGTCACTTCCTCTATCG+TGG | + | chr3_3:16829393-16829412 | None:intergenic | 40.0% |
| GGAAGTGACATTATCATCGT+TGG | - | chr3_3:16829400-16829419 | Msa0444070:intron | 40.0% | |
| CCAAATATGCATTCCATCCT+TGG | + | chr3_3:16829480-16829499 | None:intergenic | 40.0% | |
| CCAAGGATGGAATGCATATT+TGG | - | chr3_3:16829477-16829496 | Msa0444070:intron | 40.0% | |
| ATGCAGATCTCAAGCAGATT+TGG | + | chr3_3:16829503-16829522 | None:intergenic | 40.0% | |
| CTAATTTCACTGTAACCCAG+AGG | - | chr3_3:16829573-16829592 | Msa0444070:intron | 40.0% | |
| AGAGAGGGTAGTGAGTAAAC+TGG | + | chr3_3:16824701-16824720 | None:intergenic | 45.0% | |
| GTACCTCGGTTGAAGCAAAA+CGG | + | chr3_3:16824759-16824778 | None:intergenic | 45.0% | |
| !! | ATAGAGAGAGAGAGGTACCT+CGG | + | chr3_3:16824773-16824792 | None:intergenic | 45.0% |
| TGTCTGAGTCTGTGCTTCAT+AGG | - | chr3_3:16825003-16825022 | Msa0444070:CDS | 45.0% | |
| GAGTCTGTGCTTCATAGGAT+CGG | - | chr3_3:16825008-16825027 | Msa0444070:CDS | 45.0% | |
| !!! | AAGTGGTTTTGTCGCTGTTC+GGG | - | chr3_3:16825167-16825186 | Msa0444070:intron | 45.0% |
| !!! | CTTTTTCTGAGGTGTAGCTC+TGG | - | chr3_3:16825777-16825796 | Msa0444070:CDS | 45.0% |
| TGTCTCGAGTTTCATCACTG+TGG | - | chr3_3:16826024-16826043 | Msa0444070:intron | 45.0% | |
| GTCTCGAGTTTCATCACTGT+GGG | - | chr3_3:16826025-16826044 | Msa0444070:intron | 45.0% | |
| ! | TGGTGAAATGGGGAAGTGTA+TGG | - | chr3_3:16826114-16826133 | Msa0444070:CDS | 45.0% |
| GCTGAAGTTGCAGAGAATTG+AGG | - | chr3_3:16826313-16826332 | Msa0444070:CDS | 45.0% | |
| AGACGGAGGTCAATGTAGAT+TGG | + | chr3_3:16826723-16826742 | None:intergenic | 45.0% | |
| AAATGAGGTGGAAGAGACAG+AGG | + | chr3_3:16826796-16826815 | None:intergenic | 45.0% | |
| CAATGGGTAAGGCAGTGTAA+GGG | + | chr3_3:16826836-16826855 | None:intergenic | 45.0% | |
| AGAGAGACACATGTGGCAAT+GGG | + | chr3_3:16826852-16826871 | None:intergenic | 45.0% | |
| AAGAGAGACACATGTGGCAA+TGG | + | chr3_3:16826853-16826872 | None:intergenic | 45.0% | |
| GTCCTGATTGATAGAGAGCA+AGG | - | chr3_3:16827062-16827081 | Msa0444070:CDS | 45.0% | |
| CACCTTGCTCTCTATCAATC+AGG | + | chr3_3:16827067-16827086 | None:intergenic | 45.0% | |
| CTGATTGATAGAGAGCAAGG+TGG | - | chr3_3:16827065-16827084 | Msa0444070:CDS | 45.0% | |
| CGGGAAAATTTGGAGGAGAA+TGG | - | chr3_3:16827089-16827108 | Msa0444070:CDS | 45.0% | |
| !! | TGGAAGACTTGATGACGAGA+TGG | - | chr3_3:16827169-16827188 | Msa0444070:CDS | 45.0% |
| !! | AGACTTGATGACGAGATGGT+AGG | - | chr3_3:16827173-16827192 | Msa0444070:CDS | 45.0% |
| !! | GACTTGATGACGAGATGGTA+GGG | - | chr3_3:16827174-16827193 | Msa0444070:CDS | 45.0% |
| !! | ACTTGATGACGAGATGGTAG+GGG | - | chr3_3:16827175-16827194 | Msa0444070:CDS | 45.0% |
| GGTTGAGAAGCCAATAACCA+AGG | - | chr3_3:16827247-16827266 | Msa0444070:CDS | 45.0% | |
| !! | GCTATAGCAGTGTTGCTTAG+CGG | - | chr3_3:16827699-16827718 | Msa0444070:CDS | 45.0% |
| TTGCAGATCGCGGAAAATAG+CGG | + | chr3_3:16827737-16827756 | None:intergenic | 45.0% | |
| TTCCGCGATCTGCAATTGTT+TGG | - | chr3_3:16827742-16827761 | Msa0444070:CDS | 45.0% | |
| GTCTTCAGCAAGCATATCTC+AGG | + | chr3_3:16827824-16827843 | None:intergenic | 45.0% | |
| ! | ATGCTTGCTGAAGACTCATG+TGG | - | chr3_3:16827829-16827848 | Msa0444070:exon | 45.0% |
| TTTAGTCCATCCACGATTCC+AGG | + | chr3_3:16828364-16828383 | None:intergenic | 45.0% | |
| CTTGCTGAAATGAGTTCAGC+CGG | - | chr3_3:16828522-16828541 | Msa0444070:intron | 45.0% | |
| CAGTATAATCTCCCTTGGCA+AGG | + | chr3_3:16828551-16828570 | None:intergenic | 45.0% | |
| AGCAGCAGTATAATCTCCCT+TGG | + | chr3_3:16828556-16828575 | None:intergenic | 45.0% | |
| TATCCGTCAATCCAGCATCA+TGG | - | chr3_3:16828622-16828641 | Msa0444070:intron | 45.0% | |
| GGAGTTGCCTGAATGAAAGA+AGG | + | chr3_3:16828666-16828685 | None:intergenic | 45.0% | |
| TCTTTCATTCAGGCAACTCC+TGG | - | chr3_3:16828666-16828685 | Msa0444070:intron | 45.0% | |
| GCCTCTGTCTGATCTTAAGA+TGG | + | chr3_3:16828882-16828901 | None:intergenic | 45.0% | |
| GACATTATCATCGTTGGACG+TGG | - | chr3_3:16829406-16829425 | Msa0444070:intron | 45.0% | |
| ATGAATACCGTGTCCAAGGA+TGG | - | chr3_3:16829464-16829483 | Msa0444070:intron | 45.0% | |
| ATGCATTCCATCCTTGGACA+CGG | + | chr3_3:16829474-16829493 | None:intergenic | 45.0% | |
| TTTCACTGTAACCCAGAGGA+AGG | - | chr3_3:16829577-16829596 | Msa0444070:intron | 45.0% | |
| GAGGGTAGTGAGTAAACTGG+AGG | + | chr3_3:16824698-16824717 | None:intergenic | 50.0% | |
| GTTGAAGCAAAACGGAGCTG+CGG | + | chr3_3:16824751-16824770 | None:intergenic | 50.0% | |
| !!! | AGTGGTTTTGTCGCTGTTCG+GGG | - | chr3_3:16825168-16825187 | Msa0444070:intron | 50.0% |
| CGTAACAAACCGGACACCTA+GGG | + | chr3_3:16825396-16825415 | None:intergenic | 50.0% | |
| !! | CCTAGGTGTCCGGTTTGTTA+CGG | - | chr3_3:16825394-16825413 | Msa0444070:intron | 50.0% |
| TCACTGTGGGTGTATTTGGC+AGG | - | chr3_3:16826038-16826057 | Msa0444070:intron | 50.0% | |
| GGACATGGCGTCATCATCAT+TGG | - | chr3_3:16826617-16826636 | Msa0444070:CDS | 50.0% | |
| !! | GAGATTTGCTGGAGGAGAGA+AGG | + | chr3_3:16826759-16826778 | None:intergenic | 50.0% |
| TTAGGGTCTGCGAGATTTGC+TGG | + | chr3_3:16826770-16826789 | None:intergenic | 50.0% | |
| GCAATGGGTAAGGCAGTGTA+AGG | + | chr3_3:16826837-16826856 | None:intergenic | 50.0% | |
| GACACATGTGGCAATGGGTA+AGG | + | chr3_3:16826847-16826866 | None:intergenic | 50.0% | |
| CTGAGCAAGAGAGACACATG+TGG | + | chr3_3:16826859-16826878 | None:intergenic | 50.0% | |
| ! | TCTTGCTCAGAGTATCCCCA+TGG | - | chr3_3:16826869-16826888 | Msa0444070:intron | 50.0% |
| TCCTTACGACGCATGACCAT+GGG | + | chr3_3:16826888-16826907 | None:intergenic | 50.0% | |
| TTCCTTACGACGCATGACCA+TGG | + | chr3_3:16826889-16826908 | None:intergenic | 50.0% | |
| GGCACTGCTAAAGCCATTGA+AGG | - | chr3_3:16826921-16826940 | Msa0444070:intron | 50.0% | |
| TTCAACCCCACAGAACGTAG+TGG | + | chr3_3:16827026-16827045 | None:intergenic | 50.0% | |
| TTGATAGAGAGCAAGGTGGG+CGG | - | chr3_3:16827069-16827088 | Msa0444070:CDS | 50.0% | |
| GAATAGGAAGGTTGCAGCTG+TGG | - | chr3_3:16827220-16827239 | Msa0444070:CDS | 50.0% | |
| CTGTGTTTGGCTGCAGATGT+TGG | - | chr3_3:16827362-16827381 | Msa0444070:CDS | 50.0% | |
| GGCGTATCACGGAACAATAG+TGG | + | chr3_3:16827640-16827659 | None:intergenic | 50.0% | |
| GGCCAAACAATTGCAGATCG+CGG | + | chr3_3:16827747-16827766 | None:intergenic | 50.0% | |
| GCTCACATAATCTCTGGTCC+TGG | - | chr3_3:16828343-16828362 | Msa0444070:intron | 50.0% | |
| AATCTCTGGTCCTGGAATCG+TGG | - | chr3_3:16828351-16828370 | Msa0444070:intron | 50.0% | |
| ATCTCCCTTGGCAAGGTTAC+CGG | + | chr3_3:16828544-16828563 | None:intergenic | 50.0% | |
| TGGCCATGATGCTGGATTGA+CGG | + | chr3_3:16828628-16828647 | None:intergenic | 50.0% | |
| TCAATCCAGCATCATGGCCA+GGG | - | chr3_3:16828628-16828647 | Msa0444070:intron | 50.0% | |
| GGCAACTCCTGGAGTTCAAA+TGG | - | chr3_3:16828677-16828696 | Msa0444070:intron | 50.0% | |
| CCAGTCACCATTTGAACTCC+AGG | + | chr3_3:16828687-16828706 | None:intergenic | 50.0% | |
| CCTGGAGTTCAAATGGTGAC+TGG | - | chr3_3:16828684-16828703 | Msa0444070:intron | 50.0% | |
| GGAGTTCAAATGGTGACTGG+TGG | - | chr3_3:16828687-16828706 | Msa0444070:intron | 50.0% | |
| ! | TGACTGGTGGCGATGGTTTA+GGG | - | chr3_3:16828700-16828719 | Msa0444070:intron | 50.0% |
| GACGAAAAGGGGTAAGAGAC+AGG | - | chr3_3:16828847-16828866 | Msa0444070:intron | 50.0% | |
| GATCAGACAGAGGCTTAGGT+AGG | - | chr3_3:16828888-16828907 | Msa0444070:intron | 50.0% | |
| TATTCATGAGCTGCCTCAGC+AGG | + | chr3_3:16829451-16829470 | None:intergenic | 50.0% | |
| GCTCATGAATACCGTGTCCA+AGG | - | chr3_3:16829460-16829479 | Msa0444070:intron | 50.0% | |
| ACTGGAGGTCGAGTGTTCAG+TGG | + | chr3_3:16824683-16824702 | None:intergenic | 55.0% | |
| ! | GCTCCGTTTTGCTTCAACCG+AGG | - | chr3_3:16824753-16824772 | Msa0444070:three_prime_UTR | 55.0% |
| GTTCGGGGACGTGTTTGGAT+TGG | - | chr3_3:16825183-16825202 | Msa0444070:intron | 55.0% | |
| CCGTAACAAACCGGACACCT+AGG | + | chr3_3:16825397-16825416 | None:intergenic | 55.0% | |
| CCTTACGACGCATGACCATG+GGG | + | chr3_3:16826887-16826906 | None:intergenic | 55.0% | |
| AGCTGCACCACTACGTTCTG+TGG | - | chr3_3:16827016-16827035 | Msa0444070:intron | 55.0% | |
| GCTGCACCACTACGTTCTGT+GGG | - | chr3_3:16827017-16827036 | Msa0444070:intron | 55.0% | |
| CTGCACCACTACGTTCTGTG+GGG | - | chr3_3:16827018-16827037 | Msa0444070:intron | 55.0% | |
| GGGGTTGAAGATCAGTGACG+CGG | - | chr3_3:16827037-16827056 | Msa0444070:intron | 55.0% | |
| TGATAGAGAGCAAGGTGGGC+GGG | - | chr3_3:16827070-16827089 | Msa0444070:CDS | 55.0% | |
| GCAAGGTGGGCGGGAAAATT+TGG | - | chr3_3:16827079-16827098 | Msa0444070:CDS | 55.0% | |
| AGGTGGGCGGGAAAATTTGG+AGG | - | chr3_3:16827082-16827101 | Msa0444070:CDS | 55.0% | |
| GAAGGTTGCAGCTGTGGCAA+AGG | - | chr3_3:16827226-16827245 | Msa0444070:CDS | 55.0% | |
| TCTGGTCCTGGAATCGTGGA+TGG | - | chr3_3:16828355-16828374 | Msa0444070:intron | 55.0% | |
| CACGAGGCAAACCCTGAGTA+TGG | + | chr3_3:16828485-16828504 | None:intergenic | 55.0% | |
| CATACTCAGGGTTTGCCTCG+TGG | - | chr3_3:16828483-16828502 | Msa0444070:intron | 55.0% | |
| TCAGGGTTTGCCTCGTGGTA+GGG | - | chr3_3:16828488-16828507 | Msa0444070:intron | 55.0% | |
| AGCAATAGTCCCCTACCACG+AGG | + | chr3_3:16828501-16828520 | None:intergenic | 55.0% | |
| TTCAGCCGGTAACCTTGCCA+AGG | - | chr3_3:16828536-16828555 | Msa0444070:intron | 55.0% | |
| TCAGCCGGTAACCTTGCCAA+GGG | - | chr3_3:16828537-16828556 | Msa0444070:intron | 55.0% | |
| GTCAATCCAGCATCATGGCC+AGG | - | chr3_3:16828627-16828646 | Msa0444070:intron | 55.0% | |
| CAATCCAGCATCATGGCCAG+GGG | - | chr3_3:16828629-16828648 | Msa0444070:intron | 55.0% | |
| GAAGGATTTATGGGTGCCCC+TGG | + | chr3_3:16828648-16828667 | None:intergenic | 55.0% | |
| ! | CAAATGGTGACTGGTGGCGA+TGG | - | chr3_3:16828693-16828712 | Msa0444070:intron | 55.0% |
| ! | GTGACTGGTGGCGATGGTTT+AGG | - | chr3_3:16828699-16828718 | Msa0444070:intron | 55.0% |
| TTCCAGGTCGTCCACGATAG+AGG | - | chr3_3:16829379-16829398 | Msa0444070:intron | 55.0% | |
| TTCCTCTATCGTGGACGACC+TGG | + | chr3_3:16829384-16829403 | None:intergenic | 55.0% | |
| CGTTGGACGTGGCATCATCA+AGG | - | chr3_3:16829417-16829436 | Msa0444070:intron | 55.0% | |
| CAAGGCAGCAAATCCTGCTG+AGG | - | chr3_3:16829435-16829454 | Msa0444070:intron | 55.0% | |
| TGTAACCCAGAGGAAGGCCT+CGG | - | chr3_3:16829583-16829602 | Msa0444070:intron | 55.0% | |
| GCTGCGGCGGAGATGTTCAA+CGG | + | chr3_3:16824735-16824754 | None:intergenic | 60.0% | |
| GAAGCAAAACGGAGCTGCGG+CGG | + | chr3_3:16824748-16824767 | None:intergenic | 60.0% | |
| TCGCTGTTCGGGGACGTGTT+TGG | - | chr3_3:16825178-16825197 | Msa0444070:intron | 60.0% | |
| AGCCAATCCAAACGGGCCCT+AGG | - | chr3_3:16825377-16825396 | Msa0444070:intron | 60.0% | |
| CACCTAGGGCCCGTTTGGAT+TGG | + | chr3_3:16825382-16825401 | None:intergenic | 60.0% | |
| !! | GGGTCTGCGAGATTTGCTGG+AGG | + | chr3_3:16826767-16826786 | None:intergenic | 60.0% |
| CCCCATGGTCATGCGTCGTA+AGG | - | chr3_3:16826884-16826903 | Msa0444070:intron | 60.0% | |
| CTCAGGGTTTGCCTCGTGGT+AGG | - | chr3_3:16828487-16828506 | Msa0444070:intron | 60.0% | |
| CAGGGTTTGCCTCGTGGTAG+GGG | - | chr3_3:16828489-16828508 | Msa0444070:intron | 60.0% | |
| GTAACCCAGAGGAAGGCCTC+GGG | - | chr3_3:16829584-16829603 | Msa0444070:intron | 60.0% | |
| TGTACCCGAGGCCTTCCTCT+GGG | + | chr3_3:16829591-16829610 | None:intergenic | 60.0% | |
| ATGTACCCGAGGCCTTCCTC+TGG | + | chr3_3:16829592-16829611 | None:intergenic | 60.0% | |
| GCGGAGATGTTCAACGGCGG+CGG | + | chr3_3:16824729-16824748 | None:intergenic | 65.0% | |
| GCGGCGGAGATGTTCAACGG+CGG | + | chr3_3:16824732-16824751 | None:intergenic | 65.0% | |
| CCAAACGGGCCCTAGGTGTC+CGG | - | chr3_3:16825384-16825403 | Msa0444070:intron | 65.0% | |
| GATGTTCAACGGCGGCGGCG+CGG | + | chr3_3:16824724-16824743 | None:intergenic | 70.0% | |
| CCGGACACCTAGGGCCCGTT+TGG | + | chr3_3:16825387-16825406 | None:intergenic | 70.0% | |
| GGTGCCCCTGGCCATGATGC+TGG | + | chr3_3:16828636-16828655 | None:intergenic | 70.0% | |
| ! | ACGGCGGCGGCGCGGAGAGA+GGG | + | chr3_3:16824716-16824735 | None:intergenic | 80.0% |
| ! | AACGGCGGCGGCGCGGAGAG+AGG | + | chr3_3:16824717-16824736 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 16824654 | 16829812 | 16824654 | ID=Msa0444070;Name=Msa0444070 |
| chr3_3 | mRNA | 16824654 | 16829812 | 16824654 | ID=Msa0444070-mRNA-1;Parent=Msa0444070;Name=Msa0444070-mRNA-1;_AED=0.04;_eAED=0.04;_QI=178|1|1|1|0.83|0.71|7|299|478 |
| chr3_3 | exon | 16824654 | 16825081 | 16824654 | ID=Msa0444070-mRNA-1:exon:3510;Parent=Msa0444070-mRNA-1 |
| chr3_3 | exon | 16825720 | 16825974 | 16825720 | ID=Msa0444070-mRNA-1:exon:3509;Parent=Msa0444070-mRNA-1 |
| chr3_3 | exon | 16826076 | 16826163 | 16826076 | ID=Msa0444070-mRNA-1:exon:3508;Parent=Msa0444070-mRNA-1 |
| chr3_3 | exon | 16826260 | 16826342 | 16826260 | ID=Msa0444070-mRNA-1:exon:3507;Parent=Msa0444070-mRNA-1 |
| chr3_3 | exon | 16826568 | 16826651 | 16826568 | ID=Msa0444070-mRNA-1:exon:3506;Parent=Msa0444070-mRNA-1 |
| chr3_3 | exon | 16827048 | 16827902 | 16827048 | ID=Msa0444070-mRNA-1:exon:3505;Parent=Msa0444070-mRNA-1 |
| chr3_3 | exon | 16829692 | 16829812 | 16829692 | ID=Msa0444070-mRNA-1:exon:3504;Parent=Msa0444070-mRNA-1 |
| chr3_3 | five_prime_UTR | 16829692 | 16829812 | 16829692 | ID=Msa0444070-mRNA-1:five_prime_utr;Parent=Msa0444070-mRNA-1 |
| chr3_3 | five_prime_UTR | 16827846 | 16827902 | 16827846 | ID=Msa0444070-mRNA-1:five_prime_utr;Parent=Msa0444070-mRNA-1 |
| chr3_3 | CDS | 16827048 | 16827845 | 16827048 | ID=Msa0444070-mRNA-1:cds;Parent=Msa0444070-mRNA-1 |
| chr3_3 | CDS | 16826568 | 16826651 | 16826568 | ID=Msa0444070-mRNA-1:cds;Parent=Msa0444070-mRNA-1 |
| chr3_3 | CDS | 16826260 | 16826342 | 16826260 | ID=Msa0444070-mRNA-1:cds;Parent=Msa0444070-mRNA-1 |
| chr3_3 | CDS | 16826076 | 16826163 | 16826076 | ID=Msa0444070-mRNA-1:cds;Parent=Msa0444070-mRNA-1 |
| chr3_3 | CDS | 16825720 | 16825974 | 16825720 | ID=Msa0444070-mRNA-1:cds;Parent=Msa0444070-mRNA-1 |
| chr3_3 | CDS | 16824953 | 16825081 | 16824953 | ID=Msa0444070-mRNA-1:cds;Parent=Msa0444070-mRNA-1 |
| chr3_3 | three_prime_UTR | 16824654 | 16824952 | 16824654 | ID=Msa0444070-mRNA-1:three_prime_utr;Parent=Msa0444070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
