Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133100 | XP_003592187.1 | 69.118 | 68 | 21 | 0 | 1 | 68 | 1 | 68 | 5.36e-21 | 97.1 |
| Msa0133100 | XP_003592187.1 | 96.154 | 130 | 5 | 0 | 158 | 287 | 1 | 130 | 9.03e-83 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133100 | sp|O03982|HIP39_ARATH | 56.338 | 71 | 30 | 1 | 1 | 70 | 1 | 71 | 1.28e-17 | 81.6 |
| Msa0133100 | sp|O03982|HIP39_ARATH | 52.113 | 71 | 33 | 1 | 158 | 227 | 1 | 71 | 1.84e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133100 | G7IDY5 | 69.118 | 68 | 21 | 0 | 1 | 68 | 1 | 68 | 2.56e-21 | 97.1 |
| Msa0133100 | G7IDY5 | 96.154 | 130 | 5 | 0 | 158 | 287 | 1 | 130 | 4.32e-83 | 255 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0133100 | 0.806721 | 7.168992e-50 | -8.615850e-47 |
| Msa0071480 | Msa0133100 | 0.812827 | 3.485051e-51 | -8.615850e-47 |
| Msa0086560 | Msa0133100 | 0.934047 | 7.382127e-96 | -8.615850e-47 |
| Msa0106530 | Msa0133100 | 0.803160 | 3.981012e-49 | -8.615850e-47 |
| Msa0119430 | Msa0133100 | 0.802908 | 4.487966e-49 | -8.615850e-47 |
| Msa0119440 | Msa0133100 | 0.845000 | 5.334775e-59 | -8.615850e-47 |
| Msa0133100 | Msa0152560 | 0.804205 | 2.415484e-49 | -8.615850e-47 |
| Msa0133100 | Msa0162690 | 0.819614 | 1.058682e-52 | -8.615850e-47 |
| Msa0133100 | Msa0187310 | 0.828171 | 1.042600e-54 | -8.615850e-47 |
| Msa0133100 | Msa0196880 | 0.827993 | 1.150570e-54 | -8.615850e-47 |
| Msa0133100 | Msa0223140 | 0.818687 | 1.720863e-52 | -8.615850e-47 |
| Msa0133100 | Msa0224130 | 0.809634 | 1.717098e-50 | -8.615850e-47 |
| Msa0133100 | Msa0265270 | 0.806468 | 8.106601e-50 | -8.615850e-47 |
| Msa0133100 | Msa0276430 | 0.800714 | 1.266303e-48 | -8.615850e-47 |
| Msa0133100 | Msa0305620 | 0.826127 | 3.216766e-54 | -8.615850e-47 |
| Msa0133100 | Msa0339720 | 0.815626 | 8.397090e-52 | -8.615850e-47 |
| Msa0133100 | Msa0364790 | 0.842611 | 2.327044e-58 | -8.615850e-47 |
| Msa0133100 | Msa0412260 | 0.809805 | 1.578202e-50 | -8.615850e-47 |
| Msa0133100 | Msa0437070 | 0.802825 | 4.669193e-49 | -8.615850e-47 |
| Msa0133100 | Msa0456770 | 0.833367 | 5.555139e-56 | -8.615850e-47 |
| Msa0133100 | Msa0463490 | 0.823747 | 1.172512e-53 | -8.615850e-47 |
| Msa0133100 | Msa0524440 | 0.805680 | 1.187804e-49 | -8.615850e-47 |
| Msa0133100 | Msa0534870 | 0.810147 | 1.331578e-50 | -8.615850e-47 |
| Msa0133100 | Msa0631320 | 0.816649 | 4.960420e-52 | -8.615850e-47 |
| Msa0133100 | Msa0729350 | 0.824073 | 9.831915e-54 | -8.615850e-47 |
| Msa0133100 | Msa0734940 | 0.807104 | 5.948994e-50 | -8.615850e-47 |
| Msa0133100 | Msa0748660 | 0.831752 | 1.396774e-55 | -8.615850e-47 |
| Msa0133100 | Msa0769720 | 0.822495 | 2.298119e-53 | -8.615850e-47 |
| Msa0133100 | Msa0807670 | 0.831044 | 2.086520e-55 | -8.615850e-47 |
| Msa0133100 | Msa0807680 | 0.831967 | 1.236403e-55 | -8.615850e-47 |
| Msa0133100 | Msa0823440 | 0.803166 | 3.968276e-49 | -8.615850e-47 |
| Msa0133100 | Msa0860250 | 0.823104 | 1.657400e-53 | -8.615850e-47 |
| Msa0133100 | Msa0968050 | 0.831779 | 1.375898e-55 | -8.615850e-47 |
| Msa0133100 | Msa0999160 | 0.813565 | 2.399577e-51 | -8.615850e-47 |
| Msa0133100 | Msa1078330 | 0.812545 | 4.016902e-51 | -8.615850e-47 |
| Msa0133100 | Msa1238690 | 0.808432 | 3.106455e-50 | -8.615850e-47 |
| Msa0133100 | Msa1285200 | 0.804729 | 1.878279e-49 | -8.615850e-47 |
| Msa0133100 | Msa1364080 | 0.807357 | 5.257900e-50 | -8.615850e-47 |
| Msa0133100 | Msa1376450 | 0.805102 | 1.569349e-49 | -8.615850e-47 |
| Msa0133100 | Msa1389760 | 0.969627 | 2.114600e-130 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133100 | MtrunA17_Chr1g0202501 | 96.154 | 130 | 5 | 0 | 158 | 287 | 1 | 130 | 8.31e-87 | 255 |
| Msa0133100 | MtrunA17_Chr1g0202501 | 69.118 | 68 | 21 | 0 | 1 | 68 | 1 | 68 | 4.93e-25 | 97.1 |
| Msa0133100 | MtrunA17_Chr1g0202541 | 90.000 | 110 | 11 | 0 | 1 | 110 | 1 | 110 | 2.29e-46 | 152 |
| Msa0133100 | MtrunA17_Chr1g0202541 | 55.224 | 134 | 52 | 4 | 160 | 286 | 3 | 135 | 1.25e-28 | 106 |
| Msa0133100 | MtrunA17_Chr1g0202581 | 85.047 | 107 | 15 | 1 | 1 | 107 | 1 | 106 | 3.04e-39 | 134 |
| Msa0133100 | MtrunA17_Chr1g0202581 | 51.852 | 135 | 55 | 4 | 158 | 286 | 1 | 131 | 1.17e-23 | 93.6 |
| Msa0133100 | MtrunA17_Chr1g0202561 | 84.685 | 111 | 14 | 1 | 1 | 108 | 1 | 111 | 4.87e-39 | 134 |
| Msa0133100 | MtrunA17_Chr1g0202561 | 50.735 | 136 | 58 | 2 | 160 | 286 | 3 | 138 | 7.05e-26 | 99.8 |
| Msa0133100 | MtrunA17_Chr1g0204291 | 84.112 | 107 | 16 | 1 | 1 | 107 | 1 | 106 | 3.47e-37 | 128 |
| Msa0133100 | MtrunA17_Chr1g0204291 | 51.111 | 135 | 56 | 4 | 158 | 286 | 1 | 131 | 7.97e-23 | 91.3 |
| Msa0133100 | MtrunA17_Chr6g0469651 | 57.746 | 142 | 39 | 2 | 158 | 287 | 1 | 133 | 4.44e-34 | 120 |
| Msa0133100 | MtrunA17_Chr6g0469651 | 75.000 | 72 | 18 | 0 | 1 | 72 | 1 | 72 | 2.74e-29 | 108 |
| Msa0133100 | MtrunA17_Chr6g0469571 | 53.030 | 132 | 48 | 4 | 160 | 287 | 3 | 124 | 2.68e-33 | 118 |
| Msa0133100 | MtrunA17_Chr6g0469571 | 75.714 | 70 | 17 | 0 | 1 | 70 | 1 | 70 | 6.37e-30 | 109 |
| Msa0133100 | MtrunA17_Chr6g0469681 | 50.769 | 130 | 61 | 1 | 158 | 287 | 1 | 127 | 2.90e-33 | 118 |
| Msa0133100 | MtrunA17_Chr6g0469681 | 72.857 | 70 | 19 | 0 | 1 | 70 | 1 | 70 | 2.36e-29 | 108 |
| Msa0133100 | MtrunA17_Chr6g0469551 | 52.273 | 132 | 49 | 4 | 160 | 287 | 3 | 124 | 8.87e-33 | 117 |
| Msa0133100 | MtrunA17_Chr6g0469551 | 74.286 | 70 | 18 | 0 | 1 | 70 | 1 | 70 | 1.75e-29 | 108 |
| Msa0133100 | MtrunA17_Chr8g0387471 | 49.231 | 130 | 63 | 2 | 158 | 287 | 1 | 127 | 1.47e-32 | 116 |
| Msa0133100 | MtrunA17_Chr8g0387471 | 66.667 | 72 | 24 | 0 | 1 | 72 | 1 | 72 | 1.79e-27 | 103 |
| Msa0133100 | MtrunA17_Chr6g0469591 | 51.515 | 132 | 50 | 4 | 160 | 287 | 3 | 124 | 1.65e-31 | 114 |
| Msa0133100 | MtrunA17_Chr6g0469591 | 74.286 | 70 | 18 | 0 | 1 | 70 | 1 | 70 | 1.81e-28 | 105 |
| Msa0133100 | MtrunA17_Chr6g0469671 | 74.286 | 70 | 18 | 0 | 1 | 70 | 1 | 70 | 1.57e-30 | 110 |
| Msa0133100 | MtrunA17_Chr6g0469671 | 61.429 | 70 | 27 | 0 | 158 | 227 | 1 | 70 | 2.94e-24 | 94.4 |
| Msa0133100 | MtrunA17_Chr7g0233181 | 64.474 | 76 | 27 | 0 | 1 | 76 | 1 | 76 | 7.27e-28 | 103 |
| Msa0133100 | MtrunA17_Chr7g0233181 | 52.000 | 75 | 36 | 0 | 158 | 232 | 1 | 75 | 5.14e-21 | 85.5 |
| Msa0133100 | MtrunA17_Chr7g0233251 | 66.667 | 75 | 25 | 0 | 1 | 75 | 1 | 75 | 1.07e-27 | 103 |
| Msa0133100 | MtrunA17_Chr7g0233251 | 43.548 | 124 | 54 | 3 | 158 | 277 | 1 | 112 | 9.29e-25 | 95.9 |
| Msa0133100 | MtrunA17_Chr7g0233191 | 64.474 | 76 | 27 | 0 | 1 | 76 | 1 | 76 | 6.82e-27 | 101 |
| Msa0133100 | MtrunA17_Chr7g0233191 | 40.517 | 116 | 57 | 2 | 158 | 273 | 1 | 104 | 2.34e-21 | 86.7 |
| Msa0133100 | MtrunA17_Chr6g0469541 | 61.842 | 76 | 29 | 0 | 1 | 76 | 1 | 76 | 1.37e-26 | 100 |
| Msa0133100 | MtrunA17_Chr6g0469541 | 45.378 | 119 | 49 | 4 | 160 | 274 | 3 | 109 | 5.34e-24 | 93.6 |
| Msa0133100 | MtrunA17_Chr7g0233231 | 63.158 | 76 | 28 | 0 | 1 | 76 | 1 | 76 | 1.99e-26 | 100 |
| Msa0133100 | MtrunA17_Chr7g0233231 | 41.379 | 116 | 56 | 2 | 158 | 273 | 1 | 104 | 2.25e-23 | 92.0 |
| Msa0133100 | MtrunA17_Chr7g0233201 | 63.158 | 76 | 28 | 0 | 1 | 76 | 1 | 76 | 2.07e-26 | 100 |
| Msa0133100 | MtrunA17_Chr7g0233201 | 39.655 | 116 | 58 | 2 | 158 | 273 | 1 | 104 | 5.18e-21 | 85.9 |
| Msa0133100 | MtrunA17_Chr7g0233211 | 63.158 | 76 | 28 | 0 | 1 | 76 | 1 | 76 | 2.73e-26 | 99.8 |
| Msa0133100 | MtrunA17_Chr7g0233211 | 41.379 | 116 | 56 | 2 | 158 | 273 | 1 | 104 | 3.51e-23 | 91.7 |
| Msa0133100 | MtrunA17_Chr7g0248671 | 57.353 | 68 | 29 | 0 | 1 | 68 | 1 | 68 | 7.69e-21 | 87.4 |
| Msa0133100 | MtrunA17_Chr7g0248671 | 36.571 | 175 | 63 | 4 | 158 | 287 | 1 | 172 | 1.67e-14 | 70.1 |
| Msa0133100 | MtrunA17_Chr8g0348361 | 60.294 | 68 | 27 | 0 | 1 | 68 | 1 | 68 | 1.74e-13 | 66.6 |
| Msa0133100 | MtrunA17_Chr8g0348361 | 41.912 | 136 | 54 | 3 | 174 | 287 | 17 | 149 | 8.65e-12 | 62.0 |
| Msa0133100 | MtrunA17_Chr3g0120541 | 44.444 | 81 | 40 | 4 | 2 | 77 | 4 | 84 | 4.25e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133100 | AT1G01490.1 | 56.338 | 71 | 30 | 1 | 1 | 70 | 1 | 71 | 1.30e-18 | 81.6 |
| Msa0133100 | AT1G01490.1 | 52.113 | 71 | 33 | 1 | 158 | 227 | 1 | 71 | 1.87e-15 | 73.2 |
| Msa0133100 | AT1G01490.2 | 56.338 | 71 | 30 | 1 | 1 | 70 | 1 | 71 | 1.30e-18 | 81.6 |
| Msa0133100 | AT1G01490.2 | 52.113 | 71 | 33 | 1 | 158 | 227 | 1 | 71 | 1.87e-15 | 73.2 |
| Msa0133100 | AT5G52760.1 | 52.500 | 80 | 36 | 2 | 162 | 240 | 7 | 85 | 4.12e-17 | 76.3 |
| Msa0133100 | AT5G52760.1 | 47.500 | 80 | 40 | 2 | 2 | 80 | 4 | 82 | 1.25e-13 | 67.0 |
| Msa0133100 | AT1G01490.4 | 55.072 | 69 | 30 | 1 | 3 | 70 | 30 | 98 | 4.71e-17 | 78.2 |
| Msa0133100 | AT1G01490.4 | 51.351 | 74 | 35 | 1 | 155 | 227 | 25 | 98 | 2.87e-15 | 73.2 |
| Msa0133100 | AT5G52740.1 | 54.286 | 70 | 30 | 1 | 1 | 70 | 1 | 68 | 3.12e-16 | 73.6 |
| Msa0133100 | AT5G52740.1 | 49.254 | 67 | 32 | 1 | 161 | 227 | 4 | 68 | 5.90e-14 | 67.4 |
| Msa0133100 | AT5G52750.1 | 46.154 | 65 | 35 | 0 | 3 | 67 | 5 | 69 | 5.48e-12 | 62.8 |
| Msa0133100 | AT5G52750.1 | 44.615 | 65 | 36 | 0 | 160 | 224 | 5 | 69 | 7.62e-12 | 62.4 |
Find 57 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCAGTCTCTGGCCTTTC+AGG | 0.147290 | 1_3:+64368749 | Msa0133100:CDS |
| GCTTTGTAGAAACTTTATTT+TGG | 0.211289 | 1_3:+64369910 | Msa0133100:CDS |
| AAGGCAGTCTCTAATATTTC+AGG | 0.223869 | 1_3:+64373896 | Msa0133100:CDS |
| CTCCTGTTAAGGTCAATTTC+TGG | 0.257650 | 1_3:-64374066 | None:intergenic |
| CTCTCCTTTCTTAGGCTCCT+TGG | 0.293788 | 1_3:-64374161 | None:intergenic |
| GAAGCCAGCAGAGGAGAAAA+AGG | 0.295344 | 1_3:+64374189 | Msa0133100:CDS |
| ATTAATCCTTTCATGCTCTA+TGG | 0.308553 | 1_3:+64369281 | Msa0133100:CDS |
| TGGATCAATGTCTCCTATTA+AGG | 0.318014 | 1_3:-64369120 | None:intergenic |
| AGGGGTTGAGTCAGTTTCTT+TGG | 0.321514 | 1_3:+64374033 | Msa0133100:intron |
| GACAAGAAAATGACCTTAAT+AGG | 0.340701 | 1_3:+64369107 | Msa0133100:CDS |
| GACCAGAAATTGACCTTAAC+AGG | 0.348770 | 1_3:+64374064 | Msa0133100:CDS |
| TACTAACCTTCATATTGTTA+TGG | 0.356206 | 1_3:-64368480 | None:intergenic |
| GGTCCAACAGATAGTATCTT+AGG | 0.370404 | 1_3:-64374136 | None:intergenic |
| TTGATGAAAATTGTAATAAG+AGG | 0.391387 | 1_3:-64368429 | None:intergenic |
| GTCAGTTTCTTTGGATATGA+AGG | 0.403102 | 1_3:+64374042 | Msa0133100:CDS |
| CCAAGTCTGCCATCCTCCTT+AGG | 0.403116 | 1_3:-64369989 | None:intergenic |
| CCTAAGGAGGATGGCAGACT+TGG | 0.412623 | 1_3:+64369989 | Msa0133100:CDS |
| ATGAAAGGATTAATTATCAT+TGG | 0.416717 | 1_3:-64369272 | None:intergenic |
| CCTTTCTTAGGCTCCTTGGC+TGG | 0.442819 | 1_3:-64374157 | None:intergenic |
| TGTGGTTGTGTCATCATCAT+AGG | 0.448817 | 1_3:-64374271 | None:intergenic |
| ACAGAAAGTTGTGTTGAAGT+TGG | 0.461760 | 1_3:+64368691 | Msa0133100:intron |
| GAAATGTCATTTGATATTTG+TGG | 0.468050 | 1_3:+64369952 | Msa0133100:CDS |
| AACGTCTATGTCTCCTGTTA+AGG | 0.469452 | 1_3:-64374077 | None:intergenic |
| TTCAGTTGGACCAGCTAAAG+AGG | 0.475094 | 1_3:+64369190 | Msa0133100:CDS |
| AAAGCTATGAAAGCAGTCTC+TGG | 0.485853 | 1_3:+64368740 | Msa0133100:CDS |
| CATCATCATAGGATAATGAT+AGG | 0.491712 | 1_3:-64374260 | None:intergenic |
| AGCTTAGCCACTACACGTAC+TGG | 0.496210 | 1_3:-64369140 | None:intergenic |
| TATAGTCTAAGTCTAATGTA+TGG | 0.501650 | 1_3:-64368303 | None:intergenic |
| CATGCTGAAATACTTTCAGT+TGG | 0.503143 | 1_3:+64369176 | Msa0133100:CDS |
| TAAGAGGGAAAGAAAAGTTA+CGG | 0.504708 | 1_3:-64368413 | None:intergenic |
| AATAAGAATTCAGCAGCTCC+TGG | 0.507008 | 1_3:+64374217 | Msa0133100:CDS |
| TGCATGTAGTGGGAAAGTTA+AGG | 0.513637 | 1_3:+64374101 | Msa0133100:CDS |
| ATTGAAGTGGTAATTTGAAG+AGG | 0.514412 | 1_3:-64368388 | None:intergenic |
| CCAGCCAAGGAGCCTAAGAA+AGG | 0.547888 | 1_3:+64374157 | Msa0133100:CDS |
| GGTGTACCATAGAGCATGAA+AGG | 0.548293 | 1_3:-64369287 | None:intergenic |
| TATGGAAGAGTTGATGATAG+AGG | 0.550477 | 1_3:-64368285 | None:intergenic |
| CATAGACGTTGTGCATGTAG+TGG | 0.552040 | 1_3:+64374090 | Msa0133100:CDS |
| TAGCTTCCATAACAATATGA+AGG | 0.555459 | 1_3:+64368474 | Msa0133100:exon |
| TGGACTCTACTTCTAAAGCA+AGG | 0.555580 | 1_3:+64369930 | Msa0133100:CDS |
| TACGTGTAGTGGCTAAGCTA+AGG | 0.568064 | 1_3:+64369144 | Msa0133100:CDS |
| CATCCTAAGATACTATCTGT+TGG | 0.572285 | 1_3:+64374133 | Msa0133100:CDS |
| TCACAAACCTTCACAAAACC+AGG | 0.572656 | 1_3:-64374235 | None:intergenic |
| TGATGAAAATTGTAATAAGA+GGG | 0.575554 | 1_3:-64368428 | None:intergenic |
| TAGTTAATTCAATACCTGAA+AGG | 0.578105 | 1_3:-64368763 | None:intergenic |
| ACAGAAAATAGTGCTGCAAG+TGG | 0.586119 | 1_3:+64373838 | Msa0133100:intron |
| GGATACTATTAGTAAACCTA+AGG | 0.592800 | 1_3:+64369973 | Msa0133100:CDS |
| CTTGGATTTCGTAATATGAG+AGG | 0.594230 | 1_3:+64370007 | Msa0133100:CDS |
| ACTATCTGTTGGACCAGCCA+AGG | 0.595856 | 1_3:+64374144 | Msa0133100:CDS |
| CATTGATCCAGTACGTGTAG+TGG | 0.602340 | 1_3:+64369133 | Msa0133100:CDS |
| ATAGACGTTGTGCATGTAGT+GGG | 0.603550 | 1_3:+64374091 | Msa0133100:CDS |
| ATTAGTAAACCTAAGGAGGA+TGG | 0.606179 | 1_3:+64369980 | Msa0133100:CDS |
| TAACAGATGACACATGCACT+AGG | 0.606912 | 1_3:-64374322 | None:intergenic |
| TACTATTAGTAAACCTAAGG+AGG | 0.609361 | 1_3:+64369976 | Msa0133100:CDS |
| AAAAGTTACGGAGATTGAAG+TGG | 0.624940 | 1_3:-64368401 | None:intergenic |
| ACATTACTATTACACTAGTG+TGG | 0.640232 | 1_3:+64374291 | Msa0133100:CDS |
| ACACTAGTGTAATAGTAATG+TGG | 0.647440 | 1_3:-64374289 | None:intergenic |
| TTATGGAAGCTACTGAGCTG+AGG | 0.657868 | 1_3:-64368463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAAAAAAAAAAATATT+TGG | + | chr1_3:64371522-64371541 | Msa0133100:intron | 0.0% |
| !! | TTATAAAAAAAAAAATATTT+GGG | + | chr1_3:64371523-64371542 | Msa0133100:intron | 0.0% |
| !! | ATTTATAAAAAAAAAATATT+TGG | + | chr1_3:64371763-64371782 | Msa0133100:intron | 0.0% |
| !! | TTTATAAAAAAAAAATATTT+GGG | + | chr1_3:64371764-64371783 | Msa0133100:intron | 0.0% |
| !!! | TTATTATTTATTTTTTATTA+TGG | + | chr1_3:64373546-64373565 | Msa0133100:intron | 0.0% |
| !!! | ATCTAAATTTTTTTATATCA+AGG | + | chr1_3:64369398-64369417 | Msa0133100:intron | 10.0% |
| !!! | TTCAAAAAAGTTTATTTTTT+TGG | + | chr1_3:64370266-64370285 | Msa0133100:intron | 10.0% |
| !! | AAATAATTAAAGAAGAAAAA+TGG | + | chr1_3:64371292-64371311 | Msa0133100:intron | 10.0% |
| !! | CATACAAATAATAAATTTAA+TGG | - | chr1_3:64372592-64372611 | None:intergenic | 10.0% |
| !!! | ATACATTATCATATATTTTT+AGG | + | chr1_3:64373004-64373023 | Msa0133100:intron | 10.0% |
| !! | TTTAGATTAATAAAGTGTAT+TGG | + | chr1_3:64368910-64368929 | Msa0133100:intron | 15.0% |
| !!! | TTCTTTTTATCATCTTTTTT+AGG | - | chr1_3:64369230-64369249 | None:intergenic | 15.0% |
| !! | TAAAAAAGATGATAAAAAGA+AGG | + | chr1_3:64369229-64369248 | Msa0133100:CDS | 15.0% |
| !!! | ACTATTTCTTAATTTTGTAA+TGG | + | chr1_3:64370584-64370603 | Msa0133100:intron | 15.0% |
| !!! | ATTATTTTATACGATAAGTA+TGG | + | chr1_3:64371084-64371103 | Msa0133100:intron | 15.0% |
| !!! | TTATTTTATACGATAAGTAT+GGG | + | chr1_3:64371085-64371104 | Msa0133100:intron | 15.0% |
| !!! | TATTTTTTTTTAGTATGAGA+GGG | - | chr1_3:64371277-64371296 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTTTAGTATGAG+AGG | - | chr1_3:64371278-64371297 | None:intergenic | 15.0% |
| !! | AAATAAAATAAAGAAGAACA+TGG | + | chr1_3:64371322-64371341 | Msa0133100:intron | 15.0% |
| !! | AATAAAATAAAGAAGAACAT+GGG | + | chr1_3:64371323-64371342 | Msa0133100:intron | 15.0% |
| !! | TTTATGGTTTCTTAAAAATA+AGG | + | chr1_3:64372053-64372072 | Msa0133100:intron | 15.0% |
| !!! | TGGCTATTATAATTTTTTTT+AGG | + | chr1_3:64372366-64372385 | Msa0133100:intron | 15.0% |
| !! | CAAATAATAAATTTAATGGT+TGG | - | chr1_3:64372588-64372607 | None:intergenic | 15.0% |
| !! | TTTATTATTTGTATGTCAAT+TGG | + | chr1_3:64372597-64372616 | Msa0133100:intron | 15.0% |
| !! | TTATTATTTGTATGTCAATT+GGG | + | chr1_3:64372598-64372617 | Msa0133100:intron | 15.0% |
| !!! | TTAAAGTATCTAAAGATTAT+TGG | - | chr1_3:64372832-64372851 | None:intergenic | 15.0% |
| !!! | ACAATTTGAATTCATTTTAT+TGG | - | chr1_3:64373573-64373592 | None:intergenic | 15.0% |
| !! | AAAGAGAATAAATTTAATCA+TGG | + | chr1_3:64374003-64374022 | Msa0133100:intron | 15.0% |
| !!! | TTAACTTTTAGATTATTTGA+AGG | + | chr1_3:64374342-64374361 | Msa0133100:exon | 15.0% |
| !!! | TAACTTTTAGATTATTTGAA+GGG | + | chr1_3:64374343-64374362 | Msa0133100:exon | 15.0% |
| !! | TGATGAAAATTGTAATAAGA+GGG | - | chr1_3:64368431-64368450 | None:intergenic | 20.0% |
| !! | TTGATGAAAATTGTAATAAG+AGG | - | chr1_3:64368432-64368451 | None:intergenic | 20.0% |
| !! | TAGAAATTGTTCAAAAGAAA+AGG | - | chr1_3:64368579-64368598 | None:intergenic | 20.0% |
| !! | TAAAATATCGAACTTGAAAT+CGG | - | chr1_3:64368894-64368913 | None:intergenic | 20.0% |
| !!! | AAGTATTGATTCTATAGATT+TGG | - | chr1_3:64368998-64369017 | None:intergenic | 20.0% |
| !! | ATGAAAGGATTAATTATCAT+TGG | - | chr1_3:64369275-64369294 | None:intergenic | 20.0% |
| !! | ATTCATCTGATGATTATAAT+AGG | - | chr1_3:64369318-64369337 | None:intergenic | 20.0% |
| !!! | GTATTTCCTTTCTTTATTTT+TGG | + | chr1_3:64369456-64369475 | Msa0133100:intron | 20.0% |
| !! | ATACAACCAAAAATAAAGAA+AGG | - | chr1_3:64369465-64369484 | None:intergenic | 20.0% |
| !!! | AAACTTTTTTGAAAGTCATT+TGG | - | chr1_3:64370259-64370278 | None:intergenic | 20.0% |
| !! | ACATTATGTATTAGATTCTA+AGG | - | chr1_3:64370294-64370313 | None:intergenic | 20.0% |
| !! | CAAAATTAAGAAATAGTTCA+TGG | - | chr1_3:64370581-64370600 | None:intergenic | 20.0% |
| !! | GTGTCATATATAGTTTATTA+TGG | + | chr1_3:64370712-64370731 | Msa0133100:intron | 20.0% |
| !! | ATACTCAATTCAATATGTTA+AGG | + | chr1_3:64371180-64371199 | Msa0133100:intron | 20.0% |
| !! | CATAATTTATTGTAGATTTG+TGG | - | chr1_3:64371240-64371259 | None:intergenic | 20.0% |
| !!! | CAACACTTTTTTTTTTTTTG+AGG | - | chr1_3:64371634-64371653 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | + | chr1_3:64372232-64372251 | Msa0133100:intron | 20.0% |
| !! | AAATGAATGAAGACAATATA+TGG | - | chr1_3:64372651-64372670 | None:intergenic | 20.0% |
| !!! | TTCTTCTTATTTAAGAATCA+GGG | - | chr1_3:64372720-64372739 | None:intergenic | 20.0% |
| !!! | TTTCTTCTTATTTAAGAATC+AGG | - | chr1_3:64372721-64372740 | None:intergenic | 20.0% |
| !!! | TAGGATATTTCTTTTTTGAA+AGG | + | chr1_3:64373023-64373042 | Msa0133100:intron | 20.0% |
| !!! | TATTTTCCTTTTAAATACCT+TGG | + | chr1_3:64373419-64373438 | Msa0133100:intron | 20.0% |
| !!! | ATGAAATTAAATAGAAGCAT+AGG | - | chr1_3:64373756-64373775 | None:intergenic | 20.0% |
| !!! | GCTATTTTATTCATAAAATC+AGG | + | chr1_3:64373967-64373986 | Msa0133100:intron | 20.0% |
| !!! | ATTTTATTCATAAAATCAGG+AGG | + | chr1_3:64373970-64373989 | Msa0133100:intron | 20.0% |
| !!! | AACTTTTAGATTATTTGAAG+GGG | + | chr1_3:64374344-64374363 | Msa0133100:exon | 20.0% |
| ! | TATAGTCTAAGTCTAATGTA+TGG | - | chr1_3:64368306-64368325 | None:intergenic | 25.0% |
| ! | TACTAACCTTCATATTGTTA+TGG | - | chr1_3:64368483-64368502 | None:intergenic | 25.0% |
| ! | TAAAAGAGTGGTATTAATCA+AGG | - | chr1_3:64368518-64368537 | None:intergenic | 25.0% |
| ! | TGATAAAGAAGATAAAAGAG+TGG | - | chr1_3:64368530-64368549 | None:intergenic | 25.0% |
| ! | TATCAATGCTAAAGCATAAT+TGG | + | chr1_3:64368545-64368564 | Msa0133100:intron | 25.0% |
| !! | TTGAATTTGAAGTAGTTCTT+TGG | + | chr1_3:64368601-64368620 | Msa0133100:intron | 25.0% |
| ! | TAGTTAATTCAATACCTGAA+AGG | - | chr1_3:64368766-64368785 | None:intergenic | 25.0% |
| ! | AAAATATCGAACTTGAAATC+GGG | - | chr1_3:64368893-64368912 | None:intergenic | 25.0% |
| ! | TTGGAAATTGAAAATCTGAT+TGG | + | chr1_3:64368929-64368948 | Msa0133100:intron | 25.0% |
| ! | TGATGATTATAATAGGTAGT+AGG | - | chr1_3:64369311-64369330 | None:intergenic | 25.0% |
| ! | GTAAGTGTAGAATATCATAT+TGG | - | chr1_3:64369567-64369586 | None:intergenic | 25.0% |
| ! | GAACACAATTGTTAATACTT+AGG | - | chr1_3:64369657-64369676 | None:intergenic | 25.0% |
| ! | ATATTAAGAGTAAACTTTGC+TGG | + | chr1_3:64369762-64369781 | Msa0133100:intron | 25.0% |
| ! | GAAAGTTAATTCACTTTCTA+TGG | + | chr1_3:64369787-64369806 | Msa0133100:intron | 25.0% |
| !!! | GCTTTGTAGAAACTTTATTT+TGG | + | chr1_3:64369910-64369929 | Msa0133100:CDS | 25.0% |
| !! | GAAATGTCATTTGATATTTG+TGG | + | chr1_3:64369952-64369971 | Msa0133100:CDS | 25.0% |
| ! | GACGAATATAAGGAATAATA+AGG | - | chr1_3:64370125-64370144 | None:intergenic | 25.0% |
| ! | ATTATTCCTTATATTCGTCA+TGG | + | chr1_3:64370126-64370145 | Msa0133100:intron | 25.0% |
| ! | TTAATCACATGATCTAAGAA+GGG | - | chr1_3:64370325-64370344 | None:intergenic | 25.0% |
| ! | ATTAATCACATGATCTAAGA+AGG | - | chr1_3:64370326-64370345 | None:intergenic | 25.0% |
| ! | TAGTTGTAGCGAAAATATTA+CGG | + | chr1_3:64370406-64370425 | Msa0133100:intron | 25.0% |
| !!! | TTTTTCATGAAGTGTTTGAA+TGG | - | chr1_3:64370491-64370510 | None:intergenic | 25.0% |
| ! | AAACACTTCATGAAAAAACT+CGG | + | chr1_3:64370494-64370513 | Msa0133100:intron | 25.0% |
| !!! | AGAGCACTTCTTATAATTTT+TGG | - | chr1_3:64371111-64371130 | None:intergenic | 25.0% |
| ! | TCAATATGTTAAGGAGAATT+TGG | + | chr1_3:64371189-64371208 | Msa0133100:intron | 25.0% |
| ! | CTAAATTTAAGAGAATATCG+AGG | + | chr1_3:64371212-64371231 | Msa0133100:intron | 25.0% |
| ! | TTCTTCTTCTTTAATTAACC+AGG | - | chr1_3:64371350-64371369 | None:intergenic | 25.0% |
| ! | CTATGTTAAGTAGAAGTTTA+GGG | - | chr1_3:64371943-64371962 | None:intergenic | 25.0% |
| ! | TAAAATTAAGCCAACCTATA+GGG | - | chr1_3:64372037-64372056 | None:intergenic | 25.0% |
| ! | ATAAAATTAAGCCAACCTAT+AGG | - | chr1_3:64372038-64372057 | None:intergenic | 25.0% |
| !!! | TATAGGTTGGCTTAATTTTA+TGG | + | chr1_3:64372037-64372056 | Msa0133100:intron | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | + | chr1_3:64372117-64372136 | Msa0133100:intron | 25.0% |
| !!! | GAATTGCATATTGATTTTAC+TGG | - | chr1_3:64372145-64372164 | None:intergenic | 25.0% |
| ! | ATTGTTGTGATTCTTTCAAT+CGG | + | chr1_3:64372341-64372360 | Msa0133100:intron | 25.0% |
| !! | AAGACAATATATGGTTTTCA+GGG | - | chr1_3:64372642-64372661 | None:intergenic | 25.0% |
| ! | ATCATAGATTACAAGATTGA+AGG | - | chr1_3:64372757-64372776 | None:intergenic | 25.0% |
| !!! | TACTTTAAGATTTATGTCCT+AGG | + | chr1_3:64372844-64372863 | Msa0133100:intron | 25.0% |
| ! | TATCAATCAGATACCTATTT+GGG | + | chr1_3:64372869-64372888 | Msa0133100:intron | 25.0% |
| !!! | TGAATTGTTTTGCATAAACT+TGG | - | chr1_3:64373248-64373267 | None:intergenic | 25.0% |
| ! | TAACATTCATTGATAAGAAG+GGG | - | chr1_3:64373507-64373526 | None:intergenic | 25.0% |
| ! | CTAACATTCATTGATAAGAA+GGG | - | chr1_3:64373508-64373527 | None:intergenic | 25.0% |
| ! | TCTAACATTCATTGATAAGA+AGG | - | chr1_3:64373509-64373528 | None:intergenic | 25.0% |
| ! | AATGTCAATTACTTGTACTA+GGG | - | chr1_3:64373673-64373692 | None:intergenic | 25.0% |
| !!! | AACAAAGAAAAAAGCATTGA+AGG | + | chr1_3:64373877-64373896 | Msa0133100:CDS | 25.0% |
| !! | AATTTAATCATGGTTTTTGC+AGG | + | chr1_3:64374013-64374032 | Msa0133100:intron | 25.0% |
| !! | ATTTAATCATGGTTTTTGCA+GGG | + | chr1_3:64374014-64374033 | Msa0133100:intron | 25.0% |
| ATTGAAGTGGTAATTTGAAG+AGG | - | chr1_3:64368391-64368410 | None:intergenic | 30.0% | |
| TAAGAGGGAAAGAAAAGTTA+CGG | - | chr1_3:64368416-64368435 | None:intergenic | 30.0% | |
| TAGCTTCCATAACAATATGA+AGG | + | chr1_3:64368474-64368493 | Msa0133100:exon | 30.0% | |
| ! | AATTCTGCTTTCTTGTTTCA+TGG | + | chr1_3:64368787-64368806 | Msa0133100:intron | 30.0% |
| TGTATTTGCAATATTGTTGC+AGG | + | chr1_3:64369056-64369075 | Msa0133100:intron | 30.0% | |
| GTATTTGCAATATTGTTGCA+GGG | + | chr1_3:64369057-64369076 | Msa0133100:intron | 30.0% | |
| TATTTGCAATATTGTTGCAG+GGG | + | chr1_3:64369058-64369077 | Msa0133100:intron | 30.0% | |
| GACAAGAAAATGACCTTAAT+AGG | + | chr1_3:64369107-64369126 | Msa0133100:CDS | 30.0% | |
| ATTAATCCTTTCATGCTCTA+TGG | + | chr1_3:64369281-64369300 | Msa0133100:CDS | 30.0% | |
| !!! | TTTTTTCTGATGTACAGTGT+TGG | + | chr1_3:64369493-64369512 | Msa0133100:intron | 30.0% |
| TACTTCAGAAAATTGAGTGA+TGG | + | chr1_3:64369623-64369642 | Msa0133100:intron | 30.0% | |
| TAGAGAATCCATTAATACCA+GGG | - | chr1_3:64369743-64369762 | None:intergenic | 30.0% | |
| ATAGAGAATCCATTAATACC+AGG | - | chr1_3:64369744-64369763 | None:intergenic | 30.0% | |
| GAAGATTACATCGCATAATT+CGG | - | chr1_3:64369854-64369873 | None:intergenic | 30.0% | |
| CCATCATCACAAAAAGATTT+GGG | - | chr1_3:64369884-64369903 | None:intergenic | 30.0% | |
| ! | CCAAATCTTTTTGTGATGAT+GGG | + | chr1_3:64369882-64369901 | Msa0133100:CDS | 30.0% |
| !! | CAAATCTTTTTGTGATGATG+GGG | + | chr1_3:64369883-64369902 | Msa0133100:CDS | 30.0% |
| GGATACTATTAGTAAACCTA+AGG | + | chr1_3:64369973-64369992 | Msa0133100:CDS | 30.0% | |
| TACTATTAGTAAACCTAAGG+AGG | + | chr1_3:64369976-64369995 | Msa0133100:CDS | 30.0% | |
| TAAGTACCATGACGAATATA+AGG | - | chr1_3:64370135-64370154 | None:intergenic | 30.0% | |
| ! | TACGCTTTATTGGAAATACA+CGG | - | chr1_3:64370460-64370479 | None:intergenic | 30.0% |
| AACACTTCATGAAAAAACTC+GGG | + | chr1_3:64370495-64370514 | Msa0133100:intron | 30.0% | |
| ! | TGACTATGTTTTCCATTAGA+CGG | - | chr1_3:64370547-64370566 | None:intergenic | 30.0% |
| GAGAATAGAGAATGAAATTG+AGG | + | chr1_3:64370606-64370625 | Msa0133100:intron | 30.0% | |
| AATAGAGAATGAAATTGAGG+TGG | + | chr1_3:64370609-64370628 | Msa0133100:intron | 30.0% | |
| ACTCATAATTTATATGAGCG+TGG | + | chr1_3:64370646-64370665 | Msa0133100:intron | 30.0% | |
| ! | CTTGAATTAGTTTAAACCTC+AGG | + | chr1_3:64370742-64370761 | Msa0133100:intron | 30.0% |
| ! | CTTGAATTAGTTTAAACCTC+AGG | + | chr1_3:64370742-64370761 | Msa0133100:intron | 30.0% |
| CATAGTATTATTCATCCTCA+CGG | + | chr1_3:64370829-64370848 | Msa0133100:intron | 30.0% | |
| TATGAGAGGGATATTTGATT+TGG | - | chr1_3:64371264-64371283 | None:intergenic | 30.0% | |
| !! | ATAAATAAAGTGTTGAACCC+TGG | + | chr1_3:64371397-64371416 | Msa0133100:intron | 30.0% |
| !! | AAAAAAAAAGTGTTGAACCC+TGG | + | chr1_3:64371639-64371658 | Msa0133100:intron | 30.0% |
| GCTATGTTAAGTAGAAGTTT+AGG | - | chr1_3:64371944-64371963 | None:intergenic | 30.0% | |
| AACTTCTACTTAACATAGCA+TGG | + | chr1_3:64371945-64371964 | Msa0133100:intron | 30.0% | |
| TTGTGAGCGATTTCAAAAAT+TGG | + | chr1_3:64371980-64371999 | Msa0133100:intron | 30.0% | |
| TAAAAATAAGGTTGCTGAAG+TGG | + | chr1_3:64372065-64372084 | Msa0133100:intron | 30.0% | |
| TTGTTGTGATTCTTTCAATC+GGG | + | chr1_3:64372342-64372361 | Msa0133100:intron | 30.0% | |
| TTTAGGCCCATAATTTATAG+AGG | + | chr1_3:64372383-64372402 | Msa0133100:intron | 30.0% | |
| ! | GAAGACAATATATGGTTTTC+AGG | - | chr1_3:64372643-64372662 | None:intergenic | 30.0% |
| TATCTGATATGTATCTGACA+CGG | - | chr1_3:64372809-64372828 | None:intergenic | 30.0% | |
| GTATCAATCAGATACCTATT+TGG | + | chr1_3:64372868-64372887 | Msa0133100:intron | 30.0% | |
| GTATCTAAAAGAATTGATGC+AGG | - | chr1_3:64373063-64373082 | None:intergenic | 30.0% | |
| TTAGATACGTATCACATTGT+AGG | + | chr1_3:64373075-64373094 | Msa0133100:intron | 30.0% | |
| TAGAAGAATTGTCGTCTATT+TGG | + | chr1_3:64373173-64373192 | Msa0133100:intron | 30.0% | |
| AAGAAGTCAACTTAAGTCTT+GGG | - | chr1_3:64373364-64373383 | None:intergenic | 30.0% | |
| ATGTCAATTACTTGTACTAG+GGG | - | chr1_3:64373672-64373691 | None:intergenic | 30.0% | |
| GAATGTCAATTACTTGTACT+AGG | - | chr1_3:64373674-64373693 | None:intergenic | 30.0% | |
| CACAAGATTGTTAGGAATTT+AGG | - | chr1_3:64373806-64373825 | None:intergenic | 30.0% | |
| GAACAAATCACAAGATTGTT+AGG | - | chr1_3:64373814-64373833 | None:intergenic | 30.0% | |
| ! | TTTAATCATGGTTTTTGCAG+GGG | + | chr1_3:64374015-64374034 | Msa0133100:intron | 30.0% |
| ! | TTCTTTTTCTCTCCTTTCTT+AGG | - | chr1_3:64374172-64374191 | None:intergenic | 30.0% |
| CATCATCATAGGATAATGAT+AGG | - | chr1_3:64374263-64374282 | None:intergenic | 30.0% | |
| ACACTAGTGTAATAGTAATG+TGG | - | chr1_3:64374292-64374311 | None:intergenic | 30.0% | |
| ACATTACTATTACACTAGTG+TGG | + | chr1_3:64374291-64374310 | Msa0133100:CDS | 30.0% | |
| AAAAGTTACGGAGATTGAAG+TGG | - | chr1_3:64368404-64368423 | None:intergenic | 35.0% | |
| ACAGAAAGTTGTGTTGAAGT+TGG | + | chr1_3:64368691-64368710 | Msa0133100:intron | 35.0% | |
| TAGATGTGGATGATTGTGTA+TGG | + | chr1_3:64368958-64368977 | Msa0133100:intron | 35.0% | |
| TGGATCAATGTCTCCTATTA+AGG | - | chr1_3:64369123-64369142 | None:intergenic | 35.0% | |
| CATGCTGAAATACTTTCAGT+TGG | + | chr1_3:64369176-64369195 | Msa0133100:CDS | 35.0% | |
| ! | TCTTTCTTTTCCTCTTTAGC+TGG | - | chr1_3:64369203-64369222 | None:intergenic | 35.0% |
| !! | ACAGTGTTGGTTATAATACG+AGG | + | chr1_3:64369506-64369525 | Msa0133100:intron | 35.0% |
| TCATAATACTCCACACAACA+TGG | - | chr1_3:64369701-64369720 | None:intergenic | 35.0% | |
| TAATACCAGGGATCAAATCT+TGG | - | chr1_3:64369731-64369750 | None:intergenic | 35.0% | |
| GATTTGATCCCTGGTATTAA+TGG | + | chr1_3:64369732-64369751 | Msa0133100:intron | 35.0% | |
| TTAAGAGTAAACTTTGCTGG+TGG | + | chr1_3:64369765-64369784 | Msa0133100:intron | 35.0% | |
| GTTAATTCACTTTCTATGGC+TGG | + | chr1_3:64369791-64369810 | Msa0133100:intron | 35.0% | |
| AACTTTGAGCTAGAGTGATT+CGG | - | chr1_3:64369817-64369836 | None:intergenic | 35.0% | |
| ! | CCCAAATCTTTTTGTGATGA+TGG | + | chr1_3:64369881-64369900 | Msa0133100:CDS | 35.0% |
| CCCATCATCACAAAAAGATT+TGG | - | chr1_3:64369885-64369904 | None:intergenic | 35.0% | |
| ATTAGTAAACCTAAGGAGGA+TGG | + | chr1_3:64369980-64369999 | Msa0133100:CDS | 35.0% | |
| CTTGGATTTCGTAATATGAG+AGG | + | chr1_3:64370007-64370026 | Msa0133100:CDS | 35.0% | |
| CATCAATGTCATGATGAAGT+TGG | + | chr1_3:64370039-64370058 | Msa0133100:intron | 35.0% | |
| CTTTATTGGAAATACACGGT+TGG | - | chr1_3:64370456-64370475 | None:intergenic | 35.0% | |
| GTGTATTTCCAATAAAGCGT+AGG | + | chr1_3:64370459-64370478 | Msa0133100:intron | 35.0% | |
| ! | TCATGAAGTGTTTGAATGGT+TGG | - | chr1_3:64370487-64370506 | None:intergenic | 35.0% |
| ! | ACATTATTTTCCGCCATGAA+TGG | + | chr1_3:64370518-64370537 | Msa0133100:intron | 35.0% |
| CATAATTTATATGAGCGTGG+AGG | + | chr1_3:64370649-64370668 | Msa0133100:intron | 35.0% | |
| CGATAGTACGTAATAACCTT+TGG | + | chr1_3:64370672-64370691 | Msa0133100:intron | 35.0% | |
| ! | TAATTCAAGCATTTTGCCTG+AGG | - | chr1_3:64370761-64370780 | None:intergenic | 35.0% |
| ! | GTTAAGTAGAAGTTTAGGGT+CGG | - | chr1_3:64371939-64371958 | None:intergenic | 35.0% |
| CGATTTCAAAAATTGGTCCA+AGG | + | chr1_3:64371987-64372006 | Msa0133100:intron | 35.0% | |
| ATGTTACAAGTGGTTTACCT+TGG | - | chr1_3:64372007-64372026 | None:intergenic | 35.0% | |
| GAGAGGTGAAATTTACCAAA+CGG | + | chr1_3:64372249-64372268 | Msa0133100:intron | 35.0% | |
| ATAGGAAAGGGGAAAACAAA+TGG | + | chr1_3:64372299-64372318 | Msa0133100:intron | 35.0% | |
| TGTTGTGATTCTTTCAATCG+GGG | + | chr1_3:64372343-64372362 | Msa0133100:intron | 35.0% | |
| ACCGAGCCTCTATAAATTAT+GGG | - | chr1_3:64372392-64372411 | None:intergenic | 35.0% | |
| !! | AGAGTCCAATAAGTTGATCT+TGG | + | chr1_3:64372456-64372475 | Msa0133100:intron | 35.0% |
| CTCTTCCAAGATCAACTTAT+TGG | - | chr1_3:64372464-64372483 | None:intergenic | 35.0% | |
| GTTGATCTTGGAAGAGTTTA+TGG | + | chr1_3:64372468-64372487 | Msa0133100:intron | 35.0% | |
| TTTCACAATGCTCATCGAAA+AGG | + | chr1_3:64372503-64372522 | Msa0133100:intron | 35.0% | |
| TGTATGTCAATTGGGTCATT+TGG | + | chr1_3:64372606-64372625 | Msa0133100:intron | 35.0% | |
| AATCAGATACCTATTTGGGT+TGG | + | chr1_3:64372873-64372892 | Msa0133100:intron | 35.0% | |
| ATTAATTTCTCGAGCTTTGC+AGG | - | chr1_3:64373201-64373220 | None:intergenic | 35.0% | |
| AAATTCGTATCGTGATTGCA+AGG | - | chr1_3:64373340-64373359 | None:intergenic | 35.0% | |
| AGAAGTCAACTTAAGTCTTG+GGG | - | chr1_3:64373363-64373382 | None:intergenic | 35.0% | |
| GAAGAAGTCAACTTAAGTCT+TGG | - | chr1_3:64373365-64373384 | None:intergenic | 35.0% | |
| ! | TCAGGTCCAAGGTATTTAAA+AGG | - | chr1_3:64373428-64373447 | None:intergenic | 35.0% |
| TGATTGTGATGACTTATGCA+TGG | - | chr1_3:64373630-64373649 | None:intergenic | 35.0% | |
| AAGGCAGTCTCTAATATTTC+AGG | + | chr1_3:64373896-64373915 | Msa0133100:CDS | 35.0% | |
| GTCAGTTTCTTTGGATATGA+AGG | + | chr1_3:64374042-64374061 | Msa0133100:CDS | 35.0% | |
| CATCCTAAGATACTATCTGT+TGG | + | chr1_3:64374133-64374152 | Msa0133100:CDS | 35.0% | |
| AAAGCTATGAAAGCAGTCTC+TGG | + | chr1_3:64368740-64368759 | Msa0133100:CDS | 40.0% | |
| CTGATTGGACAGTTTAGATG+TGG | + | chr1_3:64368944-64368963 | Msa0133100:intron | 40.0% | |
| TAGATGATGACACAGCCATT+AGG | - | chr1_3:64369383-64369402 | None:intergenic | 40.0% | |
| TGTGTTCTGTCCAGAAACAA+AGG | + | chr1_3:64369670-64369689 | Msa0133100:intron | 40.0% | |
| !! | TGGACTCTACTTCTAAAGCA+AGG | + | chr1_3:64369930-64369949 | Msa0133100:CDS | 40.0% |
| TCTTCACATTGATGTGGATG+GGG | - | chr1_3:64370356-64370375 | None:intergenic | 40.0% | |
| GTCTTCACATTGATGTGGAT+GGG | - | chr1_3:64370357-64370376 | None:intergenic | 40.0% | |
| TGTCTTCACATTGATGTGGA+TGG | - | chr1_3:64370358-64370377 | None:intergenic | 40.0% | |
| AGTGTGTCTTCACATTGATG+TGG | - | chr1_3:64370362-64370381 | None:intergenic | 40.0% | |
| TTGGAAATACACGGTTGGAT+GGG | - | chr1_3:64370451-64370470 | None:intergenic | 40.0% | |
| ATTGGAAATACACGGTTGGA+TGG | - | chr1_3:64370452-64370471 | None:intergenic | 40.0% | |
| ! | CTATGTTTTCCATTAGACGG+AGG | - | chr1_3:64370544-64370563 | None:intergenic | 40.0% |
| ATAACCTTTGGACGATGACT+AGG | + | chr1_3:64370684-64370703 | Msa0133100:intron | 40.0% | |
| GCAACAATTGATGTTGCTCT+TGG | + | chr1_3:64370794-64370813 | Msa0133100:intron | 40.0% | |
| ACTTATGTACCAACACACGT+TGG | + | chr1_3:64370912-64370931 | Msa0133100:intron | 40.0% | |
| ATAAAGAAGAACATGGGTCC+TGG | + | chr1_3:64371329-64371348 | Msa0133100:intron | 40.0% | |
| AAACTAGCGGTAGTTACATG+AGG | - | chr1_3:64371442-64371461 | None:intergenic | 40.0% | |
| CATGCATTGAAGCAAACTAG+CGG | - | chr1_3:64371455-64371474 | None:intergenic | 40.0% | |
| TGCTTCAATGCATGTGTTCT+TGG | + | chr1_3:64371461-64371480 | Msa0133100:intron | 40.0% | |
| AAACTAGCGGTAGTTACATG+AGG | - | chr1_3:64371442-64371461 | None:intergenic | 40.0% | |
| CATGCATTGAAGCAAACTAG+CGG | - | chr1_3:64371455-64371474 | None:intergenic | 40.0% | |
| TGCTTCAATGCATGTCTTCT+TGG | + | chr1_3:64371703-64371722 | Msa0133100:intron | 40.0% | |
| GTAACATTTCTCCACCCTAT+AGG | + | chr1_3:64372020-64372039 | Msa0133100:intron | 40.0% | |
| AATTAAGCCAACCTATAGGG+TGG | - | chr1_3:64372034-64372053 | None:intergenic | 40.0% | |
| CAGGGATGTTCCTATGAAAT+AGG | + | chr1_3:64372091-64372110 | Msa0133100:intron | 40.0% | |
| TTCCTATGAAATAGGACGCT+CGG | + | chr1_3:64372099-64372118 | Msa0133100:intron | 40.0% | |
| !! | ATTTACCAAACGGTGTCGTT+TGG | + | chr1_3:64372259-64372278 | Msa0133100:intron | 40.0% |
| GCCCATAATTTATAGAGGCT+CGG | + | chr1_3:64372388-64372407 | Msa0133100:intron | 40.0% | |
| CACCGAGCCTCTATAAATTA+TGG | - | chr1_3:64372393-64372412 | None:intergenic | 40.0% | |
| GGTATCTGATTGATACTCCT+AGG | - | chr1_3:64372864-64372883 | None:intergenic | 40.0% | |
| CAAAGTCCTGAATTCGAATG+CGG | + | chr1_3:64373121-64373140 | Msa0133100:intron | 40.0% | |
| ! | TGCAGCACTATTTTCTGTCA+TGG | - | chr1_3:64373836-64373855 | None:intergenic | 40.0% |
| ACAGAAAATAGTGCTGCAAG+TGG | + | chr1_3:64373838-64373857 | Msa0133100:intron | 40.0% | |
| GACCAGAAATTGACCTTAAC+AGG | + | chr1_3:64374064-64374083 | Msa0133100:CDS | 40.0% | |
| CTCCTGTTAAGGTCAATTTC+TGG | - | chr1_3:64374069-64374088 | None:intergenic | 40.0% | |
| AACGTCTATGTCTCCTGTTA+AGG | - | chr1_3:64374080-64374099 | None:intergenic | 40.0% | |
| ATAGACGTTGTGCATGTAGT+GGG | + | chr1_3:64374091-64374110 | Msa0133100:CDS | 40.0% | |
| ! | TGCATGTAGTGGGAAAGTTA+AGG | + | chr1_3:64374101-64374120 | Msa0133100:CDS | 40.0% |
| GGTCCAACAGATAGTATCTT+AGG | - | chr1_3:64374139-64374158 | None:intergenic | 40.0% | |
| AATAAGAATTCAGCAGCTCC+TGG | + | chr1_3:64374217-64374236 | Msa0133100:CDS | 40.0% | |
| TCACAAACCTTCACAAAACC+AGG | - | chr1_3:64374238-64374257 | None:intergenic | 40.0% | |
| TGTGGTTGTGTCATCATCAT+AGG | - | chr1_3:64374274-64374293 | None:intergenic | 40.0% | |
| TAACAGATGACACATGCACT+AGG | - | chr1_3:64374325-64374344 | None:intergenic | 40.0% | |
| TTATGGAAGCTACTGAGCTG+AGG | - | chr1_3:64368466-64368485 | None:intergenic | 45.0% | |
| ATCTCGTGACTCTATACCGT+CGG | + | chr1_3:64368847-64368866 | Msa0133100:intron | 45.0% | |
| AACATTTCAGACGTGACCGA+CGG | - | chr1_3:64368866-64368885 | None:intergenic | 45.0% | |
| CATTGATCCAGTACGTGTAG+TGG | + | chr1_3:64369133-64369152 | Msa0133100:CDS | 45.0% | |
| TACGTGTAGTGGCTAAGCTA+AGG | + | chr1_3:64369144-64369163 | Msa0133100:CDS | 45.0% | |
| TTCAGTTGGACCAGCTAAAG+AGG | + | chr1_3:64369190-64369209 | Msa0133100:CDS | 45.0% | |
| GGTGTACCATAGAGCATGAA+AGG | - | chr1_3:64369290-64369309 | None:intergenic | 45.0% | |
| GCACGGTGGTATGAATTGTA+TGG | - | chr1_3:64369341-64369360 | None:intergenic | 45.0% | |
| AGGATCCTCTTCAACGCTTA+TGG | - | chr1_3:64369363-64369382 | None:intergenic | 45.0% | |
| ! | AGCGTTGAAGAGGATCCTAA+TGG | + | chr1_3:64369365-64369384 | Msa0133100:intron | 45.0% |
| ! | CATGGCTAGACCTTTGTTTC+TGG | - | chr1_3:64369683-64369702 | None:intergenic | 45.0% |
| AAAGGTCTAGCCATGTTGTG+TGG | + | chr1_3:64369688-64369707 | Msa0133100:intron | 45.0% | |
| GATGTCCAAGATTTGATCCC+TGG | + | chr1_3:64369723-64369742 | Msa0133100:intron | 45.0% | |
| !!! | CTTTTTGTGATGATGGGGAG+AGG | + | chr1_3:64369888-64369907 | Msa0133100:CDS | 45.0% |
| GAAGACACACTCGTTGCTAA+TGG | + | chr1_3:64370371-64370390 | Msa0133100:intron | 45.0% | |
| GGTTGGATCCTACGCTTTAT+TGG | - | chr1_3:64370470-64370489 | None:intergenic | 45.0% | |
| TCATCCTAGTCATCGTCCAA+AGG | - | chr1_3:64370691-64370710 | None:intergenic | 45.0% | |
| GCAACATCAATTGTTGCCTG+AGG | - | chr1_3:64370791-64370810 | None:intergenic | 45.0% | |
| AGATGACTCTATCAACCGTG+AGG | - | chr1_3:64370847-64370866 | None:intergenic | 45.0% | |
| !! | TTGGCTCAGTTGGTAAGGAA+CGG | + | chr1_3:64370931-64370950 | Msa0133100:intron | 45.0% |
| ! | TTTGGGCCCCCAAATTTTGA+AGG | + | chr1_3:64371860-64371879 | Msa0133100:intron | 45.0% |
| AACCGGGCCTTCAAAATTTG+GGG | - | chr1_3:64371870-64371889 | None:intergenic | 45.0% | |
| GAACCGGGCCTTCAAAATTT+GGG | - | chr1_3:64371871-64371890 | None:intergenic | 45.0% | |
| TGAACCGGGCCTTCAAAATT+TGG | - | chr1_3:64371872-64371891 | None:intergenic | 45.0% | |
| TGCAAACAGCTCTACTGAAC+CGG | - | chr1_3:64371887-64371906 | None:intergenic | 45.0% | |
| GGGTGGAGAAATGTTACAAG+TGG | - | chr1_3:64372017-64372036 | None:intergenic | 45.0% | |
| CATTTCTCCACCCTATAGGT+TGG | + | chr1_3:64372024-64372043 | Msa0133100:intron | 45.0% | |
| AACCGAGCGTCCTATTTCAT+AGG | - | chr1_3:64372104-64372123 | None:intergenic | 45.0% | |
| ACATTCCAAACGACACCGTT+TGG | - | chr1_3:64372267-64372286 | None:intergenic | 45.0% | |
| TTTCCCCTTTCCTATGACGA+GGG | - | chr1_3:64372294-64372313 | None:intergenic | 45.0% | |
| ! | TTTTCCCCTTTCCTATGACG+AGG | - | chr1_3:64372295-64372314 | None:intergenic | 45.0% |
| TGTGATTCTTTCAATCGGGG+TGG | + | chr1_3:64372346-64372365 | Msa0133100:intron | 45.0% | |
| TCTTCATTCATTTGCCCAGC+TGG | + | chr1_3:64372658-64372677 | Msa0133100:intron | 45.0% | |
| ! | GATCCTCTCTGATGCTGATT+TGG | + | chr1_3:64372952-64372971 | Msa0133100:intron | 45.0% |
| !! | CTCTCTGATGCTGATTTGGA+CGG | + | chr1_3:64372956-64372975 | Msa0133100:intron | 45.0% |
| CTAAGACCGCATTCGAATTC+AGG | - | chr1_3:64373130-64373149 | None:intergenic | 45.0% | |
| TGAAACTTAGCTCAGGTCCA+AGG | - | chr1_3:64373439-64373458 | None:intergenic | 45.0% | |
| GGTGTACTGAAACTTAGCTC+AGG | - | chr1_3:64373446-64373465 | None:intergenic | 45.0% | |
| AATCCTTGTAGTTGCAGCTG+CGG | + | chr1_3:64373466-64373485 | Msa0133100:intron | 45.0% | |
| AGGGGTTGAGTCAGTTTCTT+TGG | + | chr1_3:64374033-64374052 | Msa0133100:intron | 45.0% | |
| CATAGACGTTGTGCATGTAG+TGG | + | chr1_3:64374090-64374109 | Msa0133100:CDS | 45.0% | |
| AGAGAAAAAGAAGCCAGCAG+AGG | + | chr1_3:64374180-64374199 | Msa0133100:CDS | 45.0% | |
| ! | TGATCCTTTTTCTCCTCTGC+TGG | - | chr1_3:64374196-64374215 | None:intergenic | 45.0% |
| !!! | AAAAATTAATTCAATATTTT+TGG | + | chr1_3:64369431-64369450 | Msa0133100:intron | 5.0% |
| !!! | AACATTTTTAAATAATTAAA+AGG | + | chr1_3:64370225-64370244 | Msa0133100:intron | 5.0% |
| !!! | TTTTTTTTTTTTTATCTTTA+CGG | - | chr1_3:64371043-64371062 | None:intergenic | 5.0% |
| !! | TATTTGTAAAAAAAAATATT+TGG | + | chr1_3:64371842-64371861 | Msa0133100:intron | 5.0% |
| !! | ATTTGTAAAAAAAAATATTT+GGG | + | chr1_3:64371843-64371862 | Msa0133100:intron | 5.0% |
| !! | AAAATAAATAATAAAACTAT+GGG | - | chr1_3:64373540-64373559 | None:intergenic | 5.0% |
| !! | AAAAATAAATAATAAAACTA+TGG | - | chr1_3:64373541-64373560 | None:intergenic | 5.0% |
| ! | AAAGCAGTCTCTGGCCTTTC+AGG | + | chr1_3:64368749-64368768 | Msa0133100:CDS | 50.0% |
| AGCTTAGCCACTACACGTAC+TGG | - | chr1_3:64369143-64369162 | None:intergenic | 50.0% | |
| CCTCTTCAACGCTTATGGCA+CGG | - | chr1_3:64369358-64369377 | None:intergenic | 50.0% | |
| CATTAGACGGAGGCCATTCA+TGG | - | chr1_3:64370534-64370553 | None:intergenic | 50.0% | |
| CATGAATGGCCTCCGTCTAA+TGG | + | chr1_3:64370532-64370551 | Msa0133100:intron | 50.0% | |
| !! | ACACGTTGGCTCAGTTGGTA+AGG | + | chr1_3:64370926-64370945 | Msa0133100:intron | 50.0% |
| !! | TGGCTCAGTTGGTAAGGAAC+GGG | + | chr1_3:64370932-64370951 | Msa0133100:intron | 50.0% |
| CACAACCTTCTGCAAGGAAG+TGG | - | chr1_3:64370958-64370977 | None:intergenic | 50.0% | |
| CGAACACACAACCTTCTGCA+AGG | - | chr1_3:64370964-64370983 | None:intergenic | 50.0% | |
| GCATTGTCTGTCTAGGTCCA+GGG | - | chr1_3:64371417-64371436 | None:intergenic | 50.0% | |
| TGAGGTGGCATTGTCTGTCT+AGG | - | chr1_3:64371424-64371443 | None:intergenic | 50.0% | |
| CTAGCGGTAGTTACATGAGG+TGG | - | chr1_3:64371439-64371458 | None:intergenic | 50.0% | |
| GCATTGTCTGTCTAGGTCCA+GGG | - | chr1_3:64371417-64371436 | None:intergenic | 50.0% | |
| TGAGGTGGCATTGTCTGTCT+AGG | - | chr1_3:64371424-64371443 | None:intergenic | 50.0% | |
| CTAGCGGTAGTTACATGAGG+TGG | - | chr1_3:64371439-64371458 | None:intergenic | 50.0% | |
| ACCGGGCCTTCAAAATTTGG+GGG | - | chr1_3:64371869-64371888 | None:intergenic | 50.0% | |
| GCAAACAGCTCTACTGAACC+GGG | - | chr1_3:64371886-64371905 | None:intergenic | 50.0% | |
| GAATGTCACTCCCTCGTCAT+AGG | + | chr1_3:64372281-64372300 | Msa0133100:intron | 50.0% | |
| TCACTCCCTCGTCATAGGAA+AGG | + | chr1_3:64372286-64372305 | Msa0133100:intron | 50.0% | |
| CACTCCCTCGTCATAGGAAA+GGG | + | chr1_3:64372287-64372306 | Msa0133100:intron | 50.0% | |
| ACTCCCTCGTCATAGGAAAG+GGG | + | chr1_3:64372288-64372307 | Msa0133100:intron | 50.0% | |
| TTCTTGCATTCCCCAAGGTC+CGG | + | chr1_3:64372422-64372441 | Msa0133100:intron | 50.0% | |
| CTTATTGGACTCTGCCACTC+AGG | - | chr1_3:64372449-64372468 | None:intergenic | 50.0% | |
| GCTCATCGAAAAGGCAGTTC+TGG | + | chr1_3:64372512-64372531 | Msa0133100:intron | 50.0% | |
| ATTCGAGCAACTAGCCAGCT+GGG | - | chr1_3:64372675-64372694 | None:intergenic | 50.0% | |
| AATTCGAGCAACTAGCCAGC+TGG | - | chr1_3:64372676-64372695 | None:intergenic | 50.0% | |
| AGCACGAGACCAACCCAAAT+AGG | - | chr1_3:64372885-64372904 | None:intergenic | 50.0% | |
| CGTCCAAATCAGCATCAGAG+AGG | - | chr1_3:64372958-64372977 | None:intergenic | 50.0% | |
| GCAGCTGCAACTACAAGGAT+TGG | - | chr1_3:64373467-64373486 | None:intergenic | 50.0% | |
| ACTATCTGTTGGACCAGCCA+AGG | + | chr1_3:64374144-64374163 | Msa0133100:CDS | 50.0% | |
| CTCTCCTTTCTTAGGCTCCT+TGG | - | chr1_3:64374164-64374183 | None:intergenic | 50.0% | |
| GAAGCCAGCAGAGGAGAAAA+AGG | + | chr1_3:64374189-64374208 | Msa0133100:CDS | 50.0% | |
| !!! | AGCAGCTCCTGGTTTTGTGA+AGG | + | chr1_3:64374228-64374247 | Msa0133100:CDS | 50.0% |
| CTTCAACGCTTATGGCACGG+TGG | - | chr1_3:64369355-64369374 | None:intergenic | 55.0% | |
| !! | CCGTGCCATAAGCGTTGAAG+AGG | + | chr1_3:64369355-64369374 | Msa0133100:intron | 55.0% |
| CCAAGTCTGCCATCCTCCTT+AGG | - | chr1_3:64369992-64370011 | None:intergenic | 55.0% | |
| CCTAAGGAGGATGGCAGACT+TGG | + | chr1_3:64369989-64370008 | Msa0133100:CDS | 55.0% | |
| TAGACGGAGGCCATTCATGG+CGG | - | chr1_3:64370531-64370550 | None:intergenic | 55.0% | |
| CCAACTGAGCCAACGTGTGT+TGG | - | chr1_3:64370924-64370943 | None:intergenic | 55.0% | |
| !! | CCAACACACGTTGGCTCAGT+TGG | + | chr1_3:64370921-64370940 | Msa0133100:intron | 55.0% |
| GATTCCCTCTGCCGATGTGA+GGG | + | chr1_3:64370983-64371002 | Msa0133100:intron | 55.0% | |
| CACCAACACTGCCCTCACAT+CGG | - | chr1_3:64370997-64371016 | None:intergenic | 55.0% | |
| !! | GATGTGAGGGCAGTGTTGGT+GGG | + | chr1_3:64370996-64371015 | Msa0133100:intron | 55.0% |
| GGCATTGTCTGTCTAGGTCC+AGG | - | chr1_3:64371418-64371437 | None:intergenic | 55.0% | |
| TGGGCGTGCATCTGTCTTCT+TGG | + | chr1_3:64371542-64371561 | Msa0133100:intron | 55.0% | |
| GGCATTGTCTGTCTAGGTCC+AGG | - | chr1_3:64371418-64371437 | None:intergenic | 55.0% | |
| TGGGCGTGCATCTGTCTTCT+TGG | + | chr1_3:64371542-64371561 | Msa0133100:intron | 55.0% | |
| !! | GCCCCCAAATTTTGAAGGCC+CGG | + | chr1_3:64371865-64371884 | Msa0133100:intron | 55.0% |
| TAGGGTCGGCCATATCCTCA+GGG | - | chr1_3:64371925-64371944 | None:intergenic | 55.0% | |
| TTAGGGTCGGCCATATCCTC+AGG | - | chr1_3:64371926-64371945 | None:intergenic | 55.0% | |
| AAGGTTGCTGAAGTGGCAGC+AGG | + | chr1_3:64372072-64372091 | Msa0133100:intron | 55.0% | |
| AGGTTGCTGAAGTGGCAGCA+GGG | + | chr1_3:64372073-64372092 | Msa0133100:intron | 55.0% | |
| AGCGCTTCTTGCATTCCCCA+AGG | + | chr1_3:64372417-64372436 | Msa0133100:intron | 55.0% | |
| AGACCGCAGCTGCAACTACA+AGG | - | chr1_3:64373472-64373491 | None:intergenic | 55.0% | |
| CCTTTCTTAGGCTCCTTGGC+TGG | - | chr1_3:64374160-64374179 | None:intergenic | 55.0% | |
| CCAGCCAAGGAGCCTAAGAA+AGG | + | chr1_3:64374157-64374176 | Msa0133100:CDS | 55.0% | |
| ACGGGCCACTTCCTTGCAGA+AGG | + | chr1_3:64370950-64370969 | Msa0133100:intron | 60.0% | |
| CGATTCCCTCTGCCGATGTG+AGG | + | chr1_3:64370982-64371001 | Msa0133100:intron | 60.0% | |
| ACTGCCCTCACATCGGCAGA+GGG | - | chr1_3:64370990-64371009 | None:intergenic | 60.0% | |
| TGCCGATGTGAGGGCAGTGT+TGG | + | chr1_3:64370992-64371011 | Msa0133100:intron | 60.0% | |
| ! | CGATGTGAGGGCAGTGTTGG+TGG | + | chr1_3:64370995-64371014 | Msa0133100:intron | 60.0% |
| GAGCTGTTTGCACCCCCTCA+AGG | + | chr1_3:64371895-64371914 | Msa0133100:intron | 60.0% | |
| TGTTTGCACCCCCTCAAGGC+CGG | + | chr1_3:64371899-64371918 | Msa0133100:intron | 60.0% | |
| TGGACTCTGCCACTCAGGAC+CGG | - | chr1_3:64372444-64372463 | None:intergenic | 60.0% | |
| CACTGCCCTCACATCGGCAG+AGG | - | chr1_3:64370991-64371010 | None:intergenic | 65.0% | |
| ATCCTCAGGGCCGGCCTTGA+GGG | - | chr1_3:64371912-64371931 | None:intergenic | 65.0% | |
| TATCCTCAGGGCCGGCCTTG+AGG | - | chr1_3:64371913-64371932 | None:intergenic | 65.0% | |
| CAAGGCCGGCCCTGAGGATA+TGG | + | chr1_3:64371913-64371932 | Msa0133100:intron | 65.0% | |
| GTCGGCCATATCCTCAGGGC+CGG | - | chr1_3:64371921-64371940 | None:intergenic | 65.0% | |
| CCACTCAGGACCGGACCTTG+GGG | - | chr1_3:64372435-64372454 | None:intergenic | 65.0% | |
| GCCACTCAGGACCGGACCTT+GGG | - | chr1_3:64372436-64372455 | None:intergenic | 65.0% | |
| TGCCACTCAGGACCGGACCT+TGG | - | chr1_3:64372437-64372456 | None:intergenic | 65.0% | |
| TCCTCAGGGCCGGCCTTGAG+GGG | - | chr1_3:64371911-64371930 | None:intergenic | 70.0% | |
| CCCCAAGGTCCGGTCCTGAG+TGG | + | chr1_3:64372432-64372451 | Msa0133100:intron | 70.0% | |
| CCTCAGGGCCGGCCTTGAGG+GGG | - | chr1_3:64371910-64371929 | None:intergenic | 75.0% | |
| ! | CCCCCTCAAGGCCGGCCCTG+AGG | + | chr1_3:64371907-64371926 | Msa0133100:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 64368288 | 64374436 | 64368288 | ID=Msa0133100;Name=Msa0133100 |
| chr1_3 | mRNA | 64368288 | 64374436 | 64368288 | ID=Msa0133100-mRNA-1;Parent=Msa0133100;Name=Msa0133100-mRNA-1;_AED=0.26;_eAED=0.26;_QI=202|0.6|0.5|0.83|1|1|6|91|287 |
| chr1_3 | exon | 64368288 | 64368495 | 64368288 | ID=Msa0133100-mRNA-1:exon:21631;Parent=Msa0133100-mRNA-1 |
| chr1_3 | exon | 64368695 | 64368770 | 64368695 | ID=Msa0133100-mRNA-1:exon:21632;Parent=Msa0133100-mRNA-1 |
| chr1_3 | exon | 64369078 | 64369302 | 64369078 | ID=Msa0133100-mRNA-1:exon:21633;Parent=Msa0133100-mRNA-1 |
| chr1_3 | exon | 64369876 | 64370045 | 64369876 | ID=Msa0133100-mRNA-1:exon:21634;Parent=Msa0133100-mRNA-1 |
| chr1_3 | exon | 64373842 | 64373917 | 64373842 | ID=Msa0133100-mRNA-1:exon:21635;Parent=Msa0133100-mRNA-1 |
| chr1_3 | exon | 64374035 | 64374436 | 64374035 | ID=Msa0133100-mRNA-1:exon:21636;Parent=Msa0133100-mRNA-1 |
| chr1_3 | five_prime_UTR | 64368288 | 64368489 | 64368288 | ID=Msa0133100-mRNA-1:five_prime_utr;Parent=Msa0133100-mRNA-1 |
| chr1_3 | CDS | 64368490 | 64368495 | 64368490 | ID=Msa0133100-mRNA-1:cds;Parent=Msa0133100-mRNA-1 |
| chr1_3 | CDS | 64368695 | 64368770 | 64368695 | ID=Msa0133100-mRNA-1:cds;Parent=Msa0133100-mRNA-1 |
| chr1_3 | CDS | 64369078 | 64369302 | 64369078 | ID=Msa0133100-mRNA-1:cds;Parent=Msa0133100-mRNA-1 |
| chr1_3 | CDS | 64369876 | 64370045 | 64369876 | ID=Msa0133100-mRNA-1:cds;Parent=Msa0133100-mRNA-1 |
| chr1_3 | CDS | 64373842 | 64373917 | 64373842 | ID=Msa0133100-mRNA-1:cds;Parent=Msa0133100-mRNA-1 |
| chr1_3 | CDS | 64374035 | 64374345 | 64374035 | ID=Msa0133100-mRNA-1:cds;Parent=Msa0133100-mRNA-1 |
| chr1_3 | three_prime_UTR | 64374346 | 64374436 | 64374346 | ID=Msa0133100-mRNA-1:three_prime_utr;Parent=Msa0133100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
