Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238690 | GAU31123.1 | 75.843 | 178 | 22 | 3 | 1 | 158 | 1 | 177 | 1.38e-87 | 263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238690 | sp|Q58FX0|BAP2_ARATH | 31.383 | 188 | 82 | 7 | 11 | 156 | 23 | 205 | 7.35e-16 | 74.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa1238690 | 0.843028 | 1.801781e-58 | -8.615850e-47 |
| Msa0013280 | Msa1238690 | 0.836242 | 1.049767e-56 | -8.615850e-47 |
| Msa0071480 | Msa1238690 | 0.813070 | 3.082612e-51 | -8.615850e-47 |
| Msa0086560 | Msa1238690 | 0.826190 | 3.108129e-54 | -8.615850e-47 |
| Msa0092410 | Msa1238690 | 0.829058 | 6.364959e-55 | -8.615850e-47 |
| Msa0106530 | Msa1238690 | 0.820265 | 7.514230e-53 | -8.615850e-47 |
| Msa0119440 | Msa1238690 | 0.852550 | 4.290029e-61 | -8.615850e-47 |
| Msa0614920 | Msa1238690 | 0.830154 | 3.444883e-55 | -8.615850e-47 |
| Msa0708310 | Msa1238690 | 0.813956 | 1.968076e-51 | -8.615850e-47 |
| Msa0721340 | Msa1238690 | 0.806895 | 6.585315e-50 | -8.615850e-47 |
| Msa0724370 | Msa1238690 | 0.807698 | 4.451087e-50 | -8.615850e-47 |
| Msa0742150 | Msa1238690 | 0.805630 | 1.216661e-49 | -8.615850e-47 |
| Msa0764920 | Msa1238690 | 0.806932 | 6.469780e-50 | -8.615850e-47 |
| Msa0812950 | Msa1238690 | 0.802642 | 5.093203e-49 | -8.615850e-47 |
| Msa0813260 | Msa1238690 | 0.816004 | 6.914567e-52 | -8.615850e-47 |
| Msa0825870 | Msa1238690 | 0.818759 | 1.657943e-52 | -8.615850e-47 |
| Msa0133100 | Msa1238690 | 0.808432 | 3.106455e-50 | -8.615850e-47 |
| Msa0137800 | Msa1238690 | 0.813245 | 2.821964e-51 | -8.615850e-47 |
| Msa0152560 | Msa1238690 | 0.804732 | 1.875502e-49 | -8.615850e-47 |
| Msa0162690 | Msa1238690 | 0.830903 | 2.259234e-55 | -8.615850e-47 |
| Msa0187310 | Msa1238690 | 0.811761 | 5.956946e-51 | -8.615850e-47 |
| Msa0187830 | Msa1238690 | 0.823196 | 1.577805e-53 | -8.615850e-47 |
| Msa0189610 | Msa1238690 | 0.820425 | 6.904737e-53 | -8.615850e-47 |
| Msa0201570 | Msa1238690 | 0.808661 | 2.775920e-50 | -8.615850e-47 |
| Msa0215590 | Msa1238690 | 0.813346 | 2.681906e-51 | -8.615850e-47 |
| Msa0236070 | Msa1238690 | 0.809019 | 2.327084e-50 | -8.615850e-47 |
| Msa1225100 | Msa1238690 | 0.844095 | 9.349267e-59 | -8.615850e-47 |
| Msa1238690 | Msa1246700 | 0.827710 | 1.345941e-54 | -8.615850e-47 |
| Msa1238690 | Msa1280140 | 0.830108 | 3.536602e-55 | -8.615850e-47 |
| Msa1238690 | Msa1280150 | 0.890341 | 1.075657e-73 | -8.615850e-47 |
| Msa1238690 | Msa1280170 | 0.817731 | 2.832622e-52 | -8.615850e-47 |
| Msa1238690 | Msa1285200 | 0.812600 | 3.906566e-51 | -8.615850e-47 |
| Msa1238690 | Msa1329870 | 0.843686 | 1.202623e-58 | -8.615850e-47 |
| Msa1238690 | Msa1338400 | 0.805622 | 1.221424e-49 | -8.615850e-47 |
| Msa1238690 | Msa1353890 | 0.813825 | 2.103938e-51 | -8.615850e-47 |
| Msa1238690 | Msa1365270 | 0.817816 | 2.709617e-52 | -8.615850e-47 |
| Msa1238690 | Msa1367530 | 0.825443 | 4.674638e-54 | -8.615850e-47 |
| Msa1238690 | Msa1376450 | 0.837251 | 5.803080e-57 | -8.615850e-47 |
| Msa1238690 | Msa1389760 | 0.805475 | 1.310939e-49 | -8.615850e-47 |
| Msa1238690 | Msa1391550 | 0.839840 | 1.245840e-57 | -8.615850e-47 |
| Msa1238690 | Msa1405220 | 0.842494 | 2.498157e-58 | -8.615850e-47 |
| Msa1238690 | Msa1408180 | 0.815788 | 7.724342e-52 | -8.615850e-47 |
| Msa1238690 | Msa1418280 | 0.809121 | 2.212470e-50 | -8.615850e-47 |
| Msa1238690 | Msa1424630 | 0.824156 | 9.401043e-54 | -8.615850e-47 |
| Msa1238690 | Msa1430550 | 0.812035 | 5.192408e-51 | -8.615850e-47 |
| Msa1238690 | Msa1448980 | 0.817771 | 2.774508e-52 | -8.615850e-47 |
| Msa1238690 | Msa1457160 | 0.806903 | 6.561367e-50 | -8.615850e-47 |
| Msa1238690 | Msa1458340 | 0.807035 | 6.154181e-50 | -8.615850e-47 |
| Msa0364790 | Msa1238690 | 0.810699 | 1.012376e-50 | -8.615850e-47 |
| Msa0369920 | Msa1238690 | 0.825177 | 5.402663e-54 | -8.615850e-47 |
| Msa0371950 | Msa1238690 | 0.830953 | 2.196634e-55 | -8.615850e-47 |
| Msa0377840 | Msa1238690 | 0.811859 | 5.671667e-51 | -8.615850e-47 |
| Msa0408340 | Msa1238690 | 0.823828 | 1.122790e-53 | -8.615850e-47 |
| Msa0426560 | Msa1238690 | 0.816240 | 6.123083e-52 | -8.615850e-47 |
| Msa0432670 | Msa1238690 | 0.808886 | 2.484600e-50 | -8.615850e-47 |
| Msa0472770 | Msa1238690 | 0.808952 | 2.405211e-50 | -8.615850e-47 |
| Msa0473140 | Msa1238690 | 0.816441 | 5.522423e-52 | -8.615850e-47 |
| Msa0982780 | Msa1238690 | 0.821191 | 4.602692e-53 | -8.615850e-47 |
| Msa1034700 | Msa1238690 | 0.812837 | 3.467981e-51 | -8.615850e-47 |
| Msa1043120 | Msa1238690 | 0.849491 | 3.126165e-60 | -8.615850e-47 |
| Msa1100930 | Msa1238690 | 0.811463 | 6.914447e-51 | -8.615850e-47 |
| Msa0240270 | Msa1238690 | 0.826839 | 2.176092e-54 | -8.615850e-47 |
| Msa0244140 | Msa1238690 | 0.804895 | 1.733947e-49 | -8.615850e-47 |
| Msa0244190 | Msa1238690 | 0.819359 | 1.210408e-52 | -8.615850e-47 |
| Msa0259440 | Msa1238690 | 0.807705 | 4.435819e-50 | -8.615850e-47 |
| Msa0259580 | Msa1238690 | 0.801456 | 8.929728e-49 | -8.615850e-47 |
| Msa0269560 | Msa1238690 | 0.819548 | 1.096273e-52 | -8.615850e-47 |
| Msa0271550 | Msa1238690 | 0.827110 | 1.875023e-54 | -8.615850e-47 |
| Msa0282720 | Msa1238690 | 0.818019 | 2.437964e-52 | -8.615850e-47 |
| Msa0305620 | Msa1238690 | 0.822446 | 2.358633e-53 | -8.615850e-47 |
| Msa0319290 | Msa1238690 | 0.843545 | 1.311734e-58 | -8.615850e-47 |
| Msa0333650 | Msa1238690 | 0.816091 | 6.610860e-52 | -8.615850e-47 |
| Msa0347750 | Msa1238690 | 0.815228 | 1.029521e-51 | -8.615850e-47 |
| Msa1184750 | Msa1238690 | 0.818676 | 1.731197e-52 | -8.615850e-47 |
| Msa1184790 | Msa1238690 | 0.803469 | 3.435493e-49 | -8.615850e-47 |
| Msa0506860 | Msa1238690 | 0.808523 | 2.970301e-50 | -8.615850e-47 |
| Msa0509670 | Msa1238690 | 0.809797 | 1.584050e-50 | -8.615850e-47 |
| Msa0517610 | Msa1238690 | 0.812023 | 5.222950e-51 | -8.615850e-47 |
| Msa0524330 | Msa1238690 | 0.817849 | 2.664017e-52 | -8.615850e-47 |
| Msa0524440 | Msa1238690 | 0.832195 | 1.086034e-55 | -8.615850e-47 |
| Msa0574570 | Msa1238690 | 0.837081 | 6.414129e-57 | -8.615850e-47 |
| Msa0574600 | Msa1238690 | 0.801535 | 8.602499e-49 | -8.615850e-47 |
| Msa0599150 | Msa1238690 | 0.802814 | 4.692599e-49 | -8.615850e-47 |
| Msa0853810 | Msa1238690 | 0.825517 | 4.490151e-54 | -8.615850e-47 |
| Msa0865970 | Msa1238690 | 0.818570 | 1.830042e-52 | -8.615850e-47 |
| Msa0866070 | Msa1238690 | 0.810062 | 1.389311e-50 | -8.615850e-47 |
| Msa0870060 | Msa1238690 | 0.816499 | 5.359399e-52 | -8.615850e-47 |
| Msa0877710 | Msa1238690 | 0.808256 | 3.386883e-50 | -8.615850e-47 |
| Msa0898320 | Msa1238690 | 0.817380 | 3.398221e-52 | -8.615850e-47 |
| Msa0935770 | Msa1238690 | 0.806697 | 7.254779e-50 | -8.615850e-47 |
| Msa0968050 | Msa1238690 | 0.829030 | 6.465103e-55 | -8.615850e-47 |
| Msa0972810 | Msa1238690 | 0.810484 | 1.126373e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238690 | MtrunA17_Chr8g0350191 | 80.447 | 179 | 14 | 3 | 1 | 158 | 1 | 179 | 2.05e-87 | 253 |
| Msa1238690 | MtrunA17_Chr8g0350201 | 81.006 | 179 | 13 | 3 | 1 | 158 | 1 | 179 | 2.07e-87 | 253 |
| Msa1238690 | MtrunA17_Chr8g0350211 | 78.771 | 179 | 17 | 3 | 1 | 158 | 1 | 179 | 6.24e-83 | 241 |
| Msa1238690 | MtrunA17_Chr7g0246561 | 46.629 | 178 | 60 | 8 | 1 | 156 | 1 | 165 | 7.17e-36 | 122 |
| Msa1238690 | MtrunA17_Chr8g0350271 | 36.517 | 178 | 86 | 6 | 2 | 154 | 5 | 180 | 1.32e-20 | 83.6 |
| Msa1238690 | MtrunA17_Chr8g0350221 | 34.444 | 180 | 87 | 7 | 2 | 154 | 5 | 180 | 1.42e-19 | 80.9 |
| Msa1238690 | MtrunA17_Chr8g0350231 | 34.884 | 172 | 87 | 4 | 2 | 148 | 5 | 176 | 3.28e-19 | 79.7 |
| Msa1238690 | MtrunA17_Chr8g0350241 | 35.028 | 177 | 89 | 6 | 2 | 154 | 5 | 179 | 9.89e-18 | 75.9 |
| Msa1238690 | MtrunA17_Chr8g0350281 | 32.530 | 166 | 78 | 6 | 2 | 136 | 7 | 169 | 3.06e-17 | 74.7 |
| Msa1238690 | MtrunA17_Chr8g0350291 | 32.768 | 177 | 93 | 6 | 2 | 154 | 5 | 179 | 8.46e-17 | 73.6 |
| Msa1238690 | MtrunA17_Chr3g0109941 | 34.078 | 179 | 88 | 7 | 2 | 154 | 5 | 179 | 1.19e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238690 | AT2G45760.1 | 31.383 | 188 | 82 | 7 | 11 | 156 | 23 | 205 | 7.47e-17 | 74.3 |
| Msa1238690 | AT3G61190.1 | 30.055 | 183 | 97 | 8 | 1 | 158 | 16 | 192 | 1.74e-12 | 62.8 |
| Msa1238690 | AT3G61190.2 | 30.055 | 183 | 97 | 8 | 1 | 158 | 16 | 192 | 1.74e-12 | 62.8 |
Find 46 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAACAACAAATCCATAAA+AGG | 0.232293 | 8_2:-19344867 | Msa1238690:CDS |
| CAGCAGGGATTCCTGCTGTT+TGG | 0.345360 | 8_2:-19339942 | Msa1238690:CDS |
| TACCCTCTCAAATGTGTCTT+TGG | 0.346126 | 8_2:+19339911 | None:intergenic |
| GGTGTTCCGGTGGCCGGTAA+TGG | 0.375336 | 8_2:-19339982 | Msa1238690:CDS |
| ATAATAGAGTTCGCAGAAAT+GGG | 0.379540 | 8_2:-19340095 | Msa1238690:CDS |
| AATTAGAACAAGAACTTTGT+TGG | 0.403293 | 8_2:+19340040 | None:intergenic |
| GTACTTCACCTCTATTGTTA+CGG | 0.407402 | 8_2:+19344713 | None:intergenic |
| GATAATAGAGTTCGCAGAAA+TGG | 0.407974 | 8_2:-19340096 | Msa1238690:CDS |
| ATTAGAACAAGAACTTTGTT+GGG | 0.411878 | 8_2:+19340041 | None:intergenic |
| GTGAATGGAGTTCCGGTAAC+TGG | 0.413671 | 8_2:-19340003 | Msa1238690:CDS |
| TCGATGTCATCGACGGTGAA+TGG | 0.414254 | 8_2:-19340018 | Msa1238690:CDS |
| TACATACCCTCCAAGAAAAT+CGG | 0.418731 | 8_2:+19344641 | None:intergenic |
| CGTAGGGTAACTTCCGCCTT+CGG | 0.421093 | 8_2:+19344779 | None:intergenic |
| AAGTAGTAGTAGTGTTGGTA+TGG | 0.432057 | 8_2:-19344679 | Msa1238690:CDS |
| GTTACGGACCTTGCATGTAA+TGG | 0.432977 | 8_2:+19344729 | None:intergenic |
| CCCTGCTGCAACTCTGCTGC+AGG | 0.437005 | 8_2:+19339957 | None:intergenic |
| TCCTGCAGCAGAGTTGCAGC+AGG | 0.439575 | 8_2:-19339958 | Msa1238690:CDS |
| TCTGCTGCAGGAGCCATTAC+CGG | 0.444058 | 8_2:+19339969 | None:intergenic |
| AGTTCCGGTAACTGGTGTTC+CGG | 0.460170 | 8_2:-19339995 | Msa1238690:CDS |
| AGAGGAAGTAGTAGTAGTGT+TGG | 0.485422 | 8_2:-19344684 | Msa1238690:CDS |
| TGGTAGTTTAACCAAACAGC+AGG | 0.487555 | 8_2:+19339931 | None:intergenic |
| GCCTTCGGAATCAAGTTTCG+TGG | 0.489360 | 8_2:+19344794 | None:intergenic |
| TTCTAATTCGATGTCATCGA+CGG | 0.494293 | 8_2:-19340025 | Msa1238690:CDS |
| AGAACAACAAATCCATAAAA+GGG | 0.503622 | 8_2:-19344866 | Msa1238690:CDS |
| GCCACCGGAACACCAGTTAC+CGG | 0.504701 | 8_2:+19339991 | None:intergenic |
| TGTTGGTATGGCTAGAATAC+CGG | 0.506863 | 8_2:-19344667 | Msa1238690:CDS |
| GTAACTGGTGTTCCGGTGGC+CGG | 0.509562 | 8_2:-19339988 | Msa1238690:CDS |
| ATCGACGGTGAATGGAGTTC+CGG | 0.517982 | 8_2:-19340010 | Msa1238690:CDS |
| GGTTGTAAATATTTCAGTAA+AGG | 0.518683 | 8_2:-19340073 | Msa1238690:CDS |
| CCTCCAAGAAAATCGGAAAC+CGG | 0.520232 | 8_2:+19344648 | None:intergenic |
| TGCAAGGTCCGTAACAATAG+AGG | 0.524203 | 8_2:-19344721 | Msa1238690:CDS |
| CCCTACGTGGAACGAGAAGT+TGG | 0.563010 | 8_2:-19344763 | Msa1238690:CDS |
| CCAACTTCTCGTTCCACGTA+GGG | 0.563124 | 8_2:+19344763 | None:intergenic |
| TCCGGTAACTGGTGTTCCGG+TGG | 0.577500 | 8_2:-19339992 | Msa1238690:CDS |
| TTTGCCACTGTTCAATGCGA+CGG | 0.591761 | 8_2:-19344837 | Msa1238690:CDS |
| CCTGCAGCAGAGTTGCAGCA+GGG | 0.618156 | 8_2:-19339957 | Msa1238690:CDS |
| TACCAAAGACACATTTGAGA+GGG | 0.623302 | 8_2:-19339913 | Msa1238690:exon |
| GAGGTGAAGTACAAAACTAG+AGG | 0.629180 | 8_2:-19344702 | Msa1238690:CDS |
| CTACCAAAGACACATTTGAG+AGG | 0.629305 | 8_2:-19339914 | Msa1238690:exon |
| ACGAAACTTGATTCCGAAGG+CGG | 0.631770 | 8_2:-19344792 | Msa1238690:CDS |
| TCGACGTGCCATTACATGCA+AGG | 0.639724 | 8_2:-19344737 | Msa1238690:CDS |
| ACCACGAAACTTGATTCCGA+AGG | 0.642396 | 8_2:-19344795 | Msa1238690:CDS |
| GCTTCCGTCGCATTGAACAG+TGG | 0.660173 | 8_2:+19344833 | None:intergenic |
| TAATAGAGTTCGCAGAAATG+GGG | 0.668203 | 8_2:-19340094 | Msa1238690:CDS |
| AAGGCGGAAGTTACCCTACG+TGG | 0.698408 | 8_2:-19344776 | Msa1238690:CDS |
| ACCAACTTCTCGTTCCACGT+AGG | 0.720845 | 8_2:+19344762 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTTTTTTTTTTTTTGA+GGG | + | chr8_2:19340541-19340560 | None:intergenic | 10.0% |
| !!! | ATCTTTTTTTTTTTTTTTTG+AGG | + | chr8_2:19340542-19340561 | None:intergenic | 10.0% |
| !!! | TTTTTATAAAATCTCTTTAA+TGG | - | chr8_2:19340615-19340634 | Msa1238690:intron | 10.0% |
| !! | AGAAAGAAAATATTAATATT+TGG | + | chr8_2:19341660-19341679 | None:intergenic | 10.0% |
| !!! | TTTATACTTTTAAAGTATTT+TGG | + | chr8_2:19341961-19341980 | None:intergenic | 10.0% |
| !! | TTAAATGTAACTATATATAT+AGG | - | chr8_2:19341986-19342005 | Msa1238690:intron | 10.0% |
| !! | TAAATGTAACTATATATATA+GGG | - | chr8_2:19341987-19342006 | Msa1238690:intron | 10.0% |
| !!! | AATTGCAATTTTTAAGTTAT+AGG | - | chr8_2:19340111-19340130 | Msa1238690:intron | 15.0% |
| !! | AAAGATAAAATATGTACTAA+AGG | - | chr8_2:19340556-19340575 | Msa1238690:intron | 15.0% |
| !! | TCTCTTTAATGTTTATAAAT+TGG | - | chr8_2:19340626-19340645 | Msa1238690:intron | 15.0% |
| !!! | TAAAAGTATTGATTTTTGTT+TGG | + | chr8_2:19340903-19340922 | None:intergenic | 15.0% |
| !! | AATATTATAAAATTCATTCC+CGG | - | chr8_2:19340945-19340964 | Msa1238690:intron | 15.0% |
| !! | CATAAACTAATAAAGAATAA+GGG | + | chr8_2:19341144-19341163 | None:intergenic | 15.0% |
| !! | ACATAAACTAATAAAGAATA+AGG | + | chr8_2:19341145-19341164 | None:intergenic | 15.0% |
| !!! | ATATTTTTTATGTCGAAATT+CGG | - | chr8_2:19341434-19341453 | Msa1238690:intron | 15.0% |
| !! | CATAGTACAATAAATAAATT+GGG | + | chr8_2:19341582-19341601 | None:intergenic | 15.0% |
| !! | TCATAGTACAATAAATAAAT+TGG | + | chr8_2:19341583-19341602 | None:intergenic | 15.0% |
| !! | TACATTTATAATAAAAGACA+TGG | - | chr8_2:19341848-19341867 | Msa1238690:intron | 15.0% |
| !! | AAATGTAACTATATATATAG+GGG | - | chr8_2:19341988-19342007 | Msa1238690:intron | 15.0% |
| !! | TTTAAATAAACTAGATATGT+TGG | - | chr8_2:19342228-19342247 | Msa1238690:intron | 15.0% |
| !!! | TCTAAAAACGTAATATTTTT+TGG | + | chr8_2:19342430-19342449 | None:intergenic | 15.0% |
| !! | AAAAAAAAACTAGATATATG+TGG | - | chr8_2:19343080-19343099 | Msa1238690:intron | 15.0% |
| !!! | TTTTCATTAAAAGAAATTTC+TGG | + | chr8_2:19343301-19343320 | None:intergenic | 15.0% |
| !!! | AAACGACATTTATTTTAAAA+CGG | - | chr8_2:19343873-19343892 | Msa1238690:intron | 15.0% |
| !! | ATATATGTGAATATTCAATT+TGG | + | chr8_2:19343939-19343958 | None:intergenic | 15.0% |
| !!! | AATTGCAATTTTTAAGTTAT+AGG | - | chr8_2:19340111-19340130 | Msa1238690:intron | 15.0% |
| !!! | AATTTTTAAGTTATAGGTTG+TGG | - | chr8_2:19340117-19340136 | Msa1238690:intron | 20.0% |
| !!! | ATTTTTAAGTTATAGGTTGT+GGG | - | chr8_2:19340118-19340137 | Msa1238690:intron | 20.0% |
| !! | AAACTCAACACTAAATATTA+AGG | - | chr8_2:19340493-19340512 | Msa1238690:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGAGGGA+TGG | + | chr8_2:19340537-19340556 | None:intergenic | 20.0% |
| !!! | CAAAAATCAATACTTTTAAC+AGG | - | chr8_2:19340905-19340924 | Msa1238690:intron | 20.0% |
| !! | TTTATCTAACATATTTATGC+AGG | + | chr8_2:19341060-19341079 | None:intergenic | 20.0% |
| !!! | TGAGTTTTATCTATAAAAAC+TGG | - | chr8_2:19341250-19341269 | Msa1238690:intron | 20.0% |
| !!! | GAGTTTTATCTATAAAAACT+GGG | - | chr8_2:19341251-19341270 | Msa1238690:intron | 20.0% |
| !! | TGTCACATATAATGTATATT+TGG | - | chr8_2:19341305-19341324 | Msa1238690:intron | 20.0% |
| !! | GAATTTCGACATAAAAAATA+TGG | + | chr8_2:19341435-19341454 | None:intergenic | 20.0% |
| !! | TTTGTCATTAAAAAAAGACA+TGG | - | chr8_2:19341915-19341934 | Msa1238690:intron | 20.0% |
| !! | TTGTCATTAAAAAAAGACAT+GGG | - | chr8_2:19341916-19341935 | Msa1238690:intron | 20.0% |
| !!! | ATATGAGCAATTTCTAAAAT+TGG | + | chr8_2:19342402-19342421 | None:intergenic | 20.0% |
| !! | AACAAAATAAAACAACTGAT+TGG | - | chr8_2:19342581-19342600 | Msa1238690:intron | 20.0% |
| !! | AAAAAAAAACTAGAAGTTCA+TGG | - | chr8_2:19342689-19342708 | Msa1238690:intron | 20.0% |
| !! | AAAAAAAACTAGAAGTTCAT+GGG | - | chr8_2:19342690-19342709 | Msa1238690:intron | 20.0% |
| !! | TCGTTGTATACTATTAAATT+GGG | + | chr8_2:19342844-19342863 | None:intergenic | 20.0% |
| !! | ACTTATTTAGATTGAAAGAA+AGG | - | chr8_2:19343108-19343127 | Msa1238690:intron | 20.0% |
| !! | CTTATTTAGATTGAAAGAAA+GGG | - | chr8_2:19343109-19343128 | Msa1238690:intron | 20.0% |
| !! | TTGTATAGGAGTTTATATTT+AGG | + | chr8_2:19343359-19343378 | None:intergenic | 20.0% |
| !! | TAAGTTGTTGGTATTAATTA+GGG | + | chr8_2:19343452-19343471 | None:intergenic | 20.0% |
| !! | ATAAGTTGTTGGTATTAATT+AGG | + | chr8_2:19343453-19343472 | None:intergenic | 20.0% |
| !!! | CATATTTTAAGATAAGTTGT+TGG | + | chr8_2:19343464-19343483 | None:intergenic | 20.0% |
| !! | ACTTATCTTAAAATATGAGA+AGG | - | chr8_2:19343467-19343486 | Msa1238690:intron | 20.0% |
| !! | CATTCAATACTTAATGTATT+TGG | - | chr8_2:19343712-19343731 | Msa1238690:intron | 20.0% |
| !! | CATTGAATACATAATGTATT+TGG | + | chr8_2:19343750-19343769 | None:intergenic | 20.0% |
| !!! | ATTTTTCACATTGAGTTAAA+AGG | - | chr8_2:19344225-19344244 | Msa1238690:intron | 20.0% |
| !!! | TTTTTCACATTGAGTTAAAA+GGG | - | chr8_2:19344226-19344245 | Msa1238690:intron | 20.0% |
| !!! | AATTTTTAAGTTATAGGTTG+TGG | - | chr8_2:19340117-19340136 | Msa1238690:intron | 20.0% |
| !!! | ATTTTTAAGTTATAGGTTGT+GGG | - | chr8_2:19340118-19340137 | Msa1238690:intron | 20.0% |
| !! | TCATGTATATTAAAAACAGA+AGG | - | chr8_2:19340359-19340378 | Msa1238690:intron | 20.0% |
| ! | AGAACAACAAATCCATAAAA+GGG | - | chr8_2:19339853-19339872 | Msa1238690:three_prime_UTR | 25.0% |
| ! | ATAATAGAGTTAGGAGAAAT+GGG | - | chr8_2:19340141-19340160 | Msa1238690:intron | 25.0% |
| ! | ATTAGAACAAGAACTTTGTT+GGG | + | chr8_2:19340198-19340217 | None:intergenic | 25.0% |
| ! | AATTAGAACAAGAACTTTGT+TGG | + | chr8_2:19340199-19340218 | None:intergenic | 25.0% |
| !!! | ATCATTTTATTTTTGGGTTG+TGG | + | chr8_2:19340773-19340792 | None:intergenic | 25.0% |
| ! | TGACAACTAATATCTGATAA+AGG | + | chr8_2:19341014-19341033 | None:intergenic | 25.0% |
| ! | AAACTAATAAAGAATAAGGG+AGG | + | chr8_2:19341141-19341160 | None:intergenic | 25.0% |
| ! | TCAAAGCTTCAATAAAACTA+TGG | + | chr8_2:19341364-19341383 | None:intergenic | 25.0% |
| !! | CAACACATATTGTTGTTATT+TGG | - | chr8_2:19341466-19341485 | Msa1238690:intron | 25.0% |
| !!! | GATTGTTTTACAATAATCCA+TGG | - | chr8_2:19341535-19341554 | Msa1238690:intron | 25.0% |
| ! | ATAAATAAATTGGGTCTAGT+AGG | + | chr8_2:19341573-19341592 | None:intergenic | 25.0% |
| ! | CTAAAAGATTAAATGAGTTG+AGG | - | chr8_2:19341767-19341786 | Msa1238690:intron | 25.0% |
| ! | ACAATGCTACTAATATATAC+GGG | + | chr8_2:19342183-19342202 | None:intergenic | 25.0% |
| ! | CACAATGCTACTAATATATA+CGG | + | chr8_2:19342184-19342203 | None:intergenic | 25.0% |
| ! | AAATAAACTAGATATGTTGG+TGG | - | chr8_2:19342231-19342250 | Msa1238690:intron | 25.0% |
| ! | TGTTCTATATAAAATGTCTG+TGG | - | chr8_2:19342266-19342285 | Msa1238690:intron | 25.0% |
| !! | TCTAAAATTGGACAACATAT+AGG | + | chr8_2:19342390-19342409 | None:intergenic | 25.0% |
| ! | TATTTGATTGTCTCTTAAGA+AGG | - | chr8_2:19342467-19342486 | Msa1238690:intron | 25.0% |
| ! | ATTTGATTGTCTCTTAAGAA+GGG | - | chr8_2:19342468-19342487 | Msa1238690:intron | 25.0% |
| !! | TTTCATTTTACAATGACAGT+TGG | + | chr8_2:19342556-19342575 | None:intergenic | 25.0% |
| ! | AAAAAAACTAGAAGTTCATG+GGG | - | chr8_2:19342691-19342710 | Msa1238690:intron | 25.0% |
| ! | GTCGTTGTATACTATTAAAT+TGG | + | chr8_2:19342845-19342864 | None:intergenic | 25.0% |
| !! | TGTGGATTTTATTGAAAGAT+TGG | + | chr8_2:19342976-19342995 | None:intergenic | 25.0% |
| !! | TATTTTATGTCCTAATGTGT+TGG | + | chr8_2:19343273-19343292 | None:intergenic | 25.0% |
| !!! | CAAAACTTGTTAACTTGTAT+AGG | + | chr8_2:19343373-19343392 | None:intergenic | 25.0% |
| !! | AAACAACACTCATTTTGAAT+CGG | + | chr8_2:19343537-19343556 | None:intergenic | 25.0% |
| ! | AAACAAGTCAATAGTTGATT+AGG | + | chr8_2:19343629-19343648 | None:intergenic | 25.0% |
| ! | TTGTTTATAAATGTGACTGA+GGG | + | chr8_2:19343674-19343693 | None:intergenic | 25.0% |
| ! | TTTGTTTATAAATGTGACTG+AGG | + | chr8_2:19343675-19343694 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr8_2:19343785-19343804 | Msa1238690:intron | 25.0% |
| ! | GCATTAATGTGTCTATTTAT+GGG | + | chr8_2:19343914-19343933 | None:intergenic | 25.0% |
| ! | AGCATTAATGTGTCTATTTA+TGG | + | chr8_2:19343915-19343934 | None:intergenic | 25.0% |
| ! | GAAACGTTAAAAATATGTGA+CGG | + | chr8_2:19343972-19343991 | None:intergenic | 25.0% |
| !! | ATTTAGAGTGTAGAGAAATT+GGG | + | chr8_2:19344193-19344212 | None:intergenic | 25.0% |
| !! | AATTTAGAGTGTAGAGAAAT+TGG | + | chr8_2:19344194-19344213 | None:intergenic | 25.0% |
| ! | GGTTGTAAATATTTCAGTAA+AGG | - | chr8_2:19344646-19344665 | Msa1238690:intron | 25.0% |
| ! | ATTAGAACAAGAACTTTGTT+GGG | + | chr8_2:19340198-19340217 | None:intergenic | 25.0% |
| ! | AATTAGAACAAGAACTTTGT+TGG | + | chr8_2:19340199-19340218 | None:intergenic | 25.0% |
| !! | ATTTTTATTGACAATACACG+TGG | - | chr8_2:19344870-19344889 | Msa1238690:intron | 25.0% |
| !! | TTTTTATTGACAATACACGT+GGG | - | chr8_2:19344871-19344890 | Msa1238690:intron | 25.0% |
| !!! | GAGATAACTATTTTTGTCAG+CGG | - | chr8_2:19339818-19339837 | Msa1238690:three_prime_UTR | 30.0% |
| !! | TTATGGATTTGTTGTTCTCT+TGG | + | chr8_2:19339851-19339870 | None:intergenic | 30.0% |
| GAGAACAACAAATCCATAAA+AGG | - | chr8_2:19339852-19339871 | Msa1238690:three_prime_UTR | 30.0% | |
| GATAATAGAGTTAGGAGAAA+TGG | - | chr8_2:19340140-19340159 | Msa1238690:intron | 30.0% | |
| TAATAGAGTTAGGAGAAATG+GGG | - | chr8_2:19340142-19340161 | Msa1238690:intron | 30.0% | |
| GGTTGTAAATATTTCAGTGA+AGG | - | chr8_2:19340163-19340182 | Msa1238690:intron | 30.0% | |
| TACCAAAGACACATTTGAAA+GGG | - | chr8_2:19340323-19340342 | Msa1238690:intron | 30.0% | |
| ! | ATTTTCATTGACAATACACG+TGG | - | chr8_2:19340387-19340406 | Msa1238690:intron | 30.0% |
| ! | TTTTCATTGACAATACACGT+GGG | - | chr8_2:19340388-19340407 | Msa1238690:intron | 30.0% |
| TACTAAAGGACGAATTGTTT+GGG | - | chr8_2:19340570-19340589 | Msa1238690:intron | 30.0% | |
| ! | GAAGCATTTGGTTATTAGTT+AGG | + | chr8_2:19340742-19340761 | None:intergenic | 30.0% |
| !! | AAATGTTTGTGTCACTTATG+CGG | + | chr8_2:19340813-19340832 | None:intergenic | 30.0% |
| CATCTAAAGATAATCTGGTA+AGG | + | chr8_2:19340859-19340878 | None:intergenic | 30.0% | |
| CTTACCAGATTATCTTTAGA+TGG | - | chr8_2:19340857-19340876 | Msa1238690:intron | 30.0% | |
| AGTACCATCTAAAGATAATC+TGG | + | chr8_2:19340864-19340883 | None:intergenic | 30.0% | |
| TCTAACATATTTATGCAGGT+TGG | + | chr8_2:19341056-19341075 | None:intergenic | 30.0% | |
| CTATTACTCCATTTAGAGAA+GGG | + | chr8_2:19341210-19341229 | None:intergenic | 30.0% | |
| ACAACAATATGTGTTGCAAA+TGG | + | chr8_2:19341462-19341481 | None:intergenic | 30.0% | |
| TTGTACTATGAATGCAACAA+TGG | - | chr8_2:19341592-19341611 | Msa1238690:intron | 30.0% | |
| ATAATGATGTACATACCTCA+AGG | + | chr8_2:19341628-19341647 | None:intergenic | 30.0% | |
| ! | AAATCCTCCAAACTCATTTT+TGG | - | chr8_2:19341680-19341699 | Msa1238690:intron | 30.0% |
| CATATAGCCAAAAATGAGTT+TGG | + | chr8_2:19341690-19341709 | None:intergenic | 30.0% | |
| GAAATAGACATGGATATTGA+TGG | - | chr8_2:19341720-19341739 | Msa1238690:intron | 30.0% | |
| ATTACTTAACCAATACCCAT+AGG | - | chr8_2:19342141-19342160 | Msa1238690:intron | 30.0% | |
| TTACTTAACCAATACCCATA+GGG | - | chr8_2:19342142-19342161 | Msa1238690:intron | 30.0% | |
| CGTATATATTAGTAGCATTG+TGG | - | chr8_2:19342182-19342201 | Msa1238690:intron | 30.0% | |
| TTTGATTGTCTCTTAAGAAG+GGG | - | chr8_2:19342469-19342488 | Msa1238690:intron | 30.0% | |
| GAACTTATTTAGCAACACAA+GGG | - | chr8_2:19342603-19342622 | Msa1238690:intron | 30.0% | |
| ATCGATAAAAACATAAAGCG+CGG | - | chr8_2:19342796-19342815 | Msa1238690:intron | 30.0% | |
| AGAGATTCAATCGATGATTT+AGG | + | chr8_2:19342941-19342960 | None:intergenic | 30.0% | |
| GTTTGTCTTGCTAAAAAACT+AGG | - | chr8_2:19343246-19343265 | Msa1238690:intron | 30.0% | |
| !! | GCATTTAATTTTTCTCTCAC+TGG | - | chr8_2:19343326-19343345 | Msa1238690:intron | 30.0% |
| AATTGAGCTGTTGGAAAAAT+CGG | + | chr8_2:19344035-19344054 | None:intergenic | 30.0% | |
| ! | TTTAGAGTGTAGAGAAATTG+GGG | + | chr8_2:19344192-19344211 | None:intergenic | 30.0% |
| AGAACAACAAAGCCATAAAA+GGG | - | chr8_2:19344336-19344355 | Msa1238690:intron | 30.0% | |
| !! | TAGTAGTAATAGTGTTGGTA+TGG | - | chr8_2:19344523-19344542 | Msa1238690:intron | 30.0% |
| ATAATAGAGTTCGCAGAAAT+GGG | - | chr8_2:19344624-19344643 | Msa1238690:intron | 30.0% | |
| GTACTTCACCTCTATTGTTA+CGG | + | chr8_2:19340009-19340028 | None:intergenic | 35.0% | |
| !! | AAGTAGTAGTAGTGTTGGTA+TGG | - | chr8_2:19340040-19340059 | Msa1238690:CDS | 35.0% |
| TACATACCCTCCAAGAAAAT+CGG | + | chr8_2:19340081-19340100 | None:intergenic | 35.0% | |
| TTCTAATTCGATGTCATCGA+CGG | - | chr8_2:19340211-19340230 | Msa1238690:intron | 35.0% | |
| CTACCAAAGACACATTTGAA+AGG | - | chr8_2:19340322-19340341 | Msa1238690:intron | 35.0% | |
| GTACTAAAGGACGAATTGTT+TGG | - | chr8_2:19340569-19340588 | Msa1238690:intron | 35.0% | |
| ! | ACGAATTGTTTGGGATAACA+CGG | - | chr8_2:19340579-19340598 | Msa1238690:intron | 35.0% |
| !! | AAATTGGTTTGTGAACAGCA+AGG | - | chr8_2:19340642-19340661 | Msa1238690:intron | 35.0% |
| TCTGACAAGACAATTGTACA+TGG | - | chr8_2:19340691-19340710 | Msa1238690:intron | 35.0% | |
| TAAAGGTTACACTGTCAATG+AGG | + | chr8_2:19340997-19341016 | None:intergenic | 35.0% | |
| GCTATTACTCCATTTAGAGA+AGG | + | chr8_2:19341211-19341230 | None:intergenic | 35.0% | |
| TAAATTGGGTCTAGTAGGTA+AGG | + | chr8_2:19341568-19341587 | None:intergenic | 35.0% | |
| ACTATGAATGCAACAATGGA+AGG | - | chr8_2:19341596-19341615 | Msa1238690:intron | 35.0% | |
| ATAGCCAAAAATGAGTTTGG+AGG | + | chr8_2:19341687-19341706 | None:intergenic | 35.0% | |
| ATTGTGTTTCCAAGGAACAA+GGG | - | chr8_2:19342498-19342517 | Msa1238690:intron | 35.0% | |
| GGAACTTATTTAGCAACACA+AGG | - | chr8_2:19342602-19342621 | Msa1238690:intron | 35.0% | |
| !! | TTTGATTTTGCGTCTTGTTG+TGG | + | chr8_2:19343005-19343024 | None:intergenic | 35.0% |
| AAAACTAGGACCAACACATT+AGG | - | chr8_2:19343260-19343279 | Msa1238690:intron | 35.0% | |
| !!! | GGTTCTTTTTTAACGTGTGA+GGG | + | chr8_2:19344074-19344093 | None:intergenic | 35.0% |
| !!! | TGGTTCTTTTTTAACGTGTG+AGG | + | chr8_2:19344075-19344094 | None:intergenic | 35.0% |
| ! | TGAAGGTTGATTGAAGAGAA+GGG | + | chr8_2:19344166-19344185 | None:intergenic | 35.0% |
| ! | TTGAAGGTTGATTGAAGAGA+AGG | + | chr8_2:19344167-19344186 | None:intergenic | 35.0% |
| !! | TTATGGCTTTGTTGTTCTCT+TGG | + | chr8_2:19344334-19344353 | None:intergenic | 35.0% |
| GAGAACAACAAAGCCATAAA+AGG | - | chr8_2:19344335-19344354 | Msa1238690:intron | 35.0% | |
| ! | GACAAATGTGTTCCCTTTTA+TGG | + | chr8_2:19344351-19344370 | None:intergenic | 35.0% |
| AAAAGGGAACACATTTGTCA+CGG | - | chr8_2:19344352-19344371 | Msa1238690:intron | 35.0% | |
| AGAGGTAGTAGTAATAGTGT+TGG | - | chr8_2:19344518-19344537 | Msa1238690:intron | 35.0% | |
| GATAATAGAGTTCGCAGAAA+TGG | - | chr8_2:19344623-19344642 | Msa1238690:intron | 35.0% | |
| TAATAGAGTTCGCAGAAATG+GGG | - | chr8_2:19344625-19344644 | Msa1238690:intron | 35.0% | |
| TTCTAATTCGATGTCATCGA+CGG | - | chr8_2:19340211-19340230 | Msa1238690:intron | 35.0% | |
| TACCAAAGACACATTTGAGA+GGG | - | chr8_2:19344806-19344825 | Msa1238690:CDS | 35.0% | |
| ! | GGCAAATGTGTTCCCTTTTA+TGG | + | chr8_2:19339868-19339887 | None:intergenic | 40.0% |
| GAGGTGAAGTACAAAACTAG+AGG | - | chr8_2:19340017-19340036 | Msa1238690:CDS | 40.0% | |
| AGAGGAAGTAGTAGTAGTGT+TGG | - | chr8_2:19340035-19340054 | Msa1238690:CDS | 40.0% | |
| TGTTGGTATGGCTAGAATAC+CGG | - | chr8_2:19340052-19340071 | Msa1238690:CDS | 40.0% | |
| !!! | ATACCGGTTTCCGATTTTCT+TGG | - | chr8_2:19340068-19340087 | Msa1238690:CDS | 40.0% |
| GGTTGTGGGATAATAGAGTT+AGG | - | chr8_2:19340132-19340151 | Msa1238690:intron | 40.0% | |
| TGGTAGTTTAACCAAACAGC+TGG | + | chr8_2:19340308-19340327 | None:intergenic | 40.0% | |
| CACCCTTTCAAATGTGTCTT+TGG | + | chr8_2:19340328-19340347 | None:intergenic | 40.0% | |
| !!! | TTTTTGGGTTGTGGAGTCTT+TGG | + | chr8_2:19340764-19340783 | None:intergenic | 40.0% |
| AAAGATAATCTGGTAAGGCG+CGG | + | chr8_2:19340854-19340873 | None:intergenic | 40.0% | |
| TTATCACTTGTTCACGATGG+TGG | + | chr8_2:19340973-19340992 | None:intergenic | 40.0% | |
| GGTTTATCACTTGTTCACGA+TGG | + | chr8_2:19340976-19340995 | None:intergenic | 40.0% | |
| ! | CATATTTATGCAGGTTGGCT+CGG | + | chr8_2:19341051-19341070 | None:intergenic | 40.0% |
| TACTCCATTTAGAGAAGGGA+GGG | + | chr8_2:19341206-19341225 | None:intergenic | 40.0% | |
| TTACTCCATTTAGAGAAGGG+AGG | + | chr8_2:19341207-19341226 | None:intergenic | 40.0% | |
| TGCATAAGCATGATGTGTCA+CGG | + | chr8_2:19341393-19341412 | None:intergenic | 40.0% | |
| GGAATGCTAATGAGTGCATT+TGG | - | chr8_2:19342009-19342028 | Msa1238690:intron | 40.0% | |
| ! | AATGAGTGCATTTGGAGCAT+TGG | - | chr8_2:19342017-19342036 | Msa1238690:intron | 40.0% |
| CTTGTTCCTTGGAAACACAA+TGG | + | chr8_2:19342499-19342518 | None:intergenic | 40.0% | |
| CATTGTGTTTCCAAGGAACA+AGG | - | chr8_2:19342497-19342516 | Msa1238690:intron | 40.0% | |
| TTGTGTTTCCAAGGAACAAG+GGG | - | chr8_2:19342499-19342518 | Msa1238690:intron | 40.0% | |
| GTGATTTCGTCGTCTAAATG+CGG | + | chr8_2:19343060-19343079 | None:intergenic | 40.0% | |
| TTTCACTCATCGAGGATGAA+GGG | + | chr8_2:19343199-19343218 | None:intergenic | 40.0% | |
| TTCATCCTCGATGAGTGAAA+GGG | - | chr8_2:19343199-19343218 | Msa1238690:intron | 40.0% | |
| ! | TTTTTCCCTTTCACTCATCG+AGG | + | chr8_2:19343207-19343226 | None:intergenic | 40.0% |
| TTGCTTATAAATGTGACCGG+AGG | - | chr8_2:19343788-19343807 | Msa1238690:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr8_2:19343789-19343808 | Msa1238690:intron | 40.0% | |
| GCAAAAATAACTACTCCCTC+CGG | + | chr8_2:19343807-19343826 | None:intergenic | 40.0% | |
| GTTTGACAATTCAAGTCGAC+AGG | + | chr8_2:19343994-19344013 | None:intergenic | 40.0% | |
| TATTGGAGGAATTGAGCTGT+TGG | + | chr8_2:19344044-19344063 | None:intergenic | 40.0% | |
| GAAACAAGACAGAAAGAGAG+TGG | + | chr8_2:19344099-19344118 | None:intergenic | 40.0% | |
| ! | GAAGGTTGATTGAAGAGAAG+GGG | + | chr8_2:19344165-19344184 | None:intergenic | 40.0% |
| TAGAGAAATTGGGGACTTGA+AGG | + | chr8_2:19344183-19344202 | None:intergenic | 40.0% | |
| GTTACGAACCTTGCATGTAA+TGG | + | chr8_2:19344476-19344495 | None:intergenic | 40.0% | |
| TGCAAGGTTCGTAACAATAG+AGG | - | chr8_2:19344481-19344500 | Msa1238690:intron | 40.0% | |
| GAGGTGAAGTACAAAACAAG+AGG | - | chr8_2:19344500-19344519 | Msa1238690:intron | 40.0% | |
| ! | AGTACCTGTTTCCGATTTTC+TGG | - | chr8_2:19344550-19344569 | Msa1238690:intron | 40.0% |
| ! | GTACCTGTTTCCGATTTTCT+GGG | - | chr8_2:19344551-19344570 | Msa1238690:intron | 40.0% |
| TACATACCCTCCCAGAAAAT+CGG | + | chr8_2:19344564-19344583 | None:intergenic | 40.0% | |
| TGGTAGTTTAACCAAACAGC+AGG | + | chr8_2:19340308-19340327 | None:intergenic | 40.0% | |
| CTACCAAAGACACATTTGAG+AGG | - | chr8_2:19344805-19344824 | Msa1238690:CDS | 40.0% | |
| TACCCTCTCAAATGTGTCTT+TGG | + | chr8_2:19344811-19344830 | None:intergenic | 40.0% | |
| TTTGCCACTGTTCAATGCGA+CGG | - | chr8_2:19339882-19339901 | Msa1238690:three_prime_UTR | 45.0% | |
| ACCACGAAACTTGATTCCGA+AGG | - | chr8_2:19339924-19339943 | Msa1238690:CDS | 45.0% | |
| ACGAAACTTGATTCCGAAGG+CGG | - | chr8_2:19339927-19339946 | Msa1238690:CDS | 45.0% | |
| GTTACGGACCTTGCATGTAA+TGG | + | chr8_2:19339993-19340012 | None:intergenic | 45.0% | |
| TGCAAGGTCCGTAACAATAG+AGG | - | chr8_2:19339998-19340017 | Msa1238690:CDS | 45.0% | |
| CCTCCAAGAAAATCGGAAAC+CGG | + | chr8_2:19340074-19340093 | None:intergenic | 45.0% | |
| ! | CGGTTTCCGATTTTCTTGGA+GGG | - | chr8_2:19340072-19340091 | Msa1238690:CDS | 45.0% |
| !! | GTGGAGTCTTTGGAAGCATT+TGG | + | chr8_2:19340754-19340773 | None:intergenic | 45.0% |
| !!! | GTGTCACTTATGCGGTTTTG+AGG | + | chr8_2:19340805-19340824 | None:intergenic | 45.0% |
| ATTTAGAGAAGGGAGGGGAA+GGG | + | chr8_2:19341200-19341219 | None:intergenic | 45.0% | |
| ACTCCATTTAGAGAAGGGAG+GGG | + | chr8_2:19341205-19341224 | None:intergenic | 45.0% | |
| AACTGGGACAAGTTTGAACC+TGG | - | chr8_2:19341267-19341286 | Msa1238690:intron | 45.0% | |
| GAACCTGGAAGTCGATGTTT+AGG | - | chr8_2:19341282-19341301 | Msa1238690:intron | 45.0% | |
| !! | ACACCTAAACATCGACTTCC+AGG | + | chr8_2:19341288-19341307 | None:intergenic | 45.0% |
| AATGGAAGGAGACATCCTTG+AGG | - | chr8_2:19341610-19341629 | Msa1238690:intron | 45.0% | |
| !! | CACACGCTCTGAAATAGACA+TGG | - | chr8_2:19341710-19341729 | Msa1238690:intron | 45.0% |
| GGTCAACCATTGTGTTTCCA+AGG | - | chr8_2:19342490-19342509 | Msa1238690:intron | 45.0% | |
| AGGTGTCAATGTTGCAGATC+TGG | + | chr8_2:19342921-19342940 | None:intergenic | 45.0% | |
| ! | GTCTTGTTGTGGTGTTCATG+TGG | + | chr8_2:19342994-19343013 | None:intergenic | 45.0% |
| CTTTCACTCATCGAGGATGA+AGG | + | chr8_2:19343200-19343219 | None:intergenic | 45.0% | |
| CTTCATCCTCGATGAGTGAA+AGG | - | chr8_2:19343198-19343217 | Msa1238690:intron | 45.0% | |
| !!! | GTGAGGGCATTTTGTATTGG+AGG | + | chr8_2:19344058-19344077 | None:intergenic | 45.0% |
| !!! | CGTGTGAGGGCATTTTGTAT+TGG | + | chr8_2:19344061-19344080 | None:intergenic | 45.0% |
| CAAGACAGAAAGAGAGTGGT+TGG | + | chr8_2:19344095-19344114 | None:intergenic | 45.0% | |
| TTTGTCACGGTTCAATGCGA+CGG | - | chr8_2:19344365-19344384 | Msa1238690:intron | 45.0% | |
| ACCACGAAACTTGATTCCGA+AGG | - | chr8_2:19339924-19339943 | Msa1238690:CDS | 45.0% | |
| ACGAAACTTGATTCCGAAGG+CGG | - | chr8_2:19339927-19339946 | Msa1238690:CDS | 45.0% | |
| !! | CTGTTTCCGATTTTCTGGGA+GGG | - | chr8_2:19344555-19344574 | Msa1238690:intron | 45.0% |
| !!! | ATATTAATCATTTTATTTTT+GGG | + | chr8_2:19340779-19340798 | None:intergenic | 5.0% |
| !!! | AATATTAATCATTTTATTTT+TGG | + | chr8_2:19340780-19340799 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAAGTTAAT+AGG | - | chr8_2:19343396-19343415 | Msa1238690:intron | 5.0% |
| GCCTTCGGAATCAAGTTTCG+TGG | + | chr8_2:19339928-19339947 | None:intergenic | 50.0% | |
| CCAACTTCTCGTTCCACGTA+GGG | + | chr8_2:19339959-19339978 | None:intergenic | 50.0% | |
| ACCAACTTCTCGTTCCACGT+AGG | + | chr8_2:19339960-19339979 | None:intergenic | 50.0% | |
| ! | TCGACGTGCCATTACATGCA+AGG | - | chr8_2:19339982-19340001 | Msa1238690:CDS | 50.0% |
| ! | CCGGTTTCCGATTTTCTTGG+AGG | - | chr8_2:19340071-19340090 | Msa1238690:CDS | 50.0% |
| TCGATGTCATCGACGGTGAA+TGG | - | chr8_2:19340218-19340237 | Msa1238690:intron | 50.0% | |
| ATCGACGGTGAATGGAGTTC+CGG | - | chr8_2:19340226-19340245 | Msa1238690:intron | 50.0% | |
| GTGAATGGAGTTCCGGTAAC+TGG | - | chr8_2:19340233-19340252 | Msa1238690:intron | 50.0% | |
| ! | TGGTTTGTGAACAGCAAGGC+AGG | - | chr8_2:19340646-19340665 | Msa1238690:intron | 50.0% |
| !! | TTGTTCACGATGGTGGAACC+GGG | + | chr8_2:19340966-19340985 | None:intergenic | 50.0% |
| !! | CTTGTTCACGATGGTGGAAC+CGG | + | chr8_2:19340967-19340986 | None:intergenic | 50.0% |
| !! | AGGTTGGCTCGGAAAATAGG+TGG | + | chr8_2:19341040-19341059 | None:intergenic | 50.0% |
| !! | TGCAGGTTGGCTCGGAAAAT+AGG | + | chr8_2:19341043-19341062 | None:intergenic | 50.0% |
| CATTTAGAGAAGGGAGGGGA+AGG | + | chr8_2:19341201-19341220 | None:intergenic | 50.0% | |
| CTTCCCCTCCCTTCTCTAAA+TGG | - | chr8_2:19341199-19341218 | Msa1238690:intron | 50.0% | |
| GGTCTAGTAGGTAAGGAGAC+AGG | + | chr8_2:19341561-19341580 | None:intergenic | 50.0% | |
| AACCAATACCCATAGGGCAC+TGG | - | chr8_2:19342148-19342167 | Msa1238690:intron | 50.0% | |
| ! | ACCAATACCCATAGGGCACT+GGG | - | chr8_2:19342149-19342168 | Msa1238690:intron | 50.0% |
| ATTGCTACCCAGTGCCCTAT+GGG | + | chr8_2:19342159-19342178 | None:intergenic | 50.0% | |
| TATTGCTACCCAGTGCCCTA+TGG | + | chr8_2:19342160-19342179 | None:intergenic | 50.0% | |
| ! | GTGTTGTTCGTCGTCTTGTG+TGG | + | chr8_2:19343033-19343052 | None:intergenic | 50.0% |
| ! | CGAGGATGAAGGGTGGTTTT+AGG | + | chr8_2:19343189-19343208 | None:intergenic | 50.0% |
| GGTTGATTGAAGAGAAGGGG+AGG | + | chr8_2:19344162-19344181 | None:intergenic | 50.0% | |
| GCCTTCGGAATCAAGTTTCG+TGG | + | chr8_2:19339928-19339947 | None:intergenic | 50.0% | |
| CCAACTTCTCGTTCCACGTA+GGG | + | chr8_2:19339959-19339978 | None:intergenic | 50.0% | |
| ACCAACTTCTCGTTCCACGT+AGG | + | chr8_2:19339960-19339979 | None:intergenic | 50.0% | |
| ! | TCGACGTGCCATTACATGCA+AGG | - | chr8_2:19339982-19340001 | Msa1238690:CDS | 50.0% |
| CCTCCCAGAAAATCGGAAAC+AGG | + | chr8_2:19344557-19344576 | None:intergenic | 50.0% | |
| ! | CCTGTTTCCGATTTTCTGGG+AGG | - | chr8_2:19344554-19344573 | Msa1238690:intron | 50.0% |
| TCGATGTCATCGACGGTGAA+TGG | - | chr8_2:19340218-19340237 | Msa1238690:intron | 50.0% | |
| ATCGACGGTGAATGGAGTTC+CGG | - | chr8_2:19340226-19340245 | Msa1238690:intron | 50.0% | |
| GTGAATGGAGTTCCGGTAAC+TGG | - | chr8_2:19340233-19340252 | Msa1238690:intron | 50.0% | |
| AGTTCCGGTAACTGGTGTTC+CGG | - | chr8_2:19344724-19344743 | Msa1238690:CDS | 50.0% | |
| GCTTCCGTCGCATTGAACAG+TGG | + | chr8_2:19339889-19339908 | None:intergenic | 55.0% | |
| CGTAGGGTAACTTCCGCCTT+CGG | + | chr8_2:19339943-19339962 | None:intergenic | 55.0% | |
| AAGGCGGAAGTTACCCTACG+TGG | - | chr8_2:19339943-19339962 | Msa1238690:CDS | 55.0% | |
| CCCTACGTGGAACGAGAAGT+TGG | - | chr8_2:19339956-19339975 | Msa1238690:CDS | 55.0% | |
| AGTTCCGGTAACTGGCGTTC+CGG | - | chr8_2:19340241-19340260 | Msa1238690:intron | 55.0% | |
| TCTGCTGCAGGAGCCATTAC+CGG | + | chr8_2:19340270-19340289 | None:intergenic | 55.0% | |
| CAGCAGGGATTCCAGCTGTT+TGG | - | chr8_2:19340294-19340313 | Msa1238690:intron | 55.0% | |
| GTAGGTAAGGAGACAGGCCA+TGG | + | chr8_2:19341555-19341574 | None:intergenic | 55.0% | |
| ACCCAGTGCCCTATGGGTAT+TGG | + | chr8_2:19342153-19342172 | None:intergenic | 55.0% | |
| AGTCAGCTCCCCTTGTTCCT+TGG | + | chr8_2:19342510-19342529 | None:intergenic | 55.0% | |
| CACTCATCGAGGATGAAGGG+TGG | + | chr8_2:19343196-19343215 | None:intergenic | 55.0% | |
| CGTAGGGTAACTTCCGCCTT+CGG | + | chr8_2:19339943-19339962 | None:intergenic | 55.0% | |
| AAGGCGGAAGTTACCCTACG+TGG | - | chr8_2:19339943-19339962 | Msa1238690:CDS | 55.0% | |
| CCCTACGTGGAACGAGAAGT+TGG | - | chr8_2:19339956-19339975 | Msa1238690:CDS | 55.0% | |
| TCTGCTGCAGGAGCCATTAC+CGG | + | chr8_2:19340270-19340289 | None:intergenic | 55.0% | |
| CAGCAGGGATTCCTGCTGTT+TGG | - | chr8_2:19344777-19344796 | Msa1238690:CDS | 55.0% | |
| GTCACCGGAACGCCAGTTAC+CGG | + | chr8_2:19340248-19340267 | None:intergenic | 60.0% | |
| GTAACTGGCGTTCCGGTGAC+CGG | - | chr8_2:19340248-19340267 | Msa1238690:intron | 60.0% | |
| CAGGAGCCATTACCGGTCAC+CGG | + | chr8_2:19340263-19340282 | None:intergenic | 60.0% | |
| TCCTGCAGCAGAGTTGCAGC+AGG | - | chr8_2:19340278-19340297 | Msa1238690:intron | 60.0% | |
| CCTGCAGCAGAGTTGCAGCA+GGG | - | chr8_2:19340279-19340298 | Msa1238690:intron | 60.0% | |
| TCCGGTAACTGGTGTTCCGG+TGG | - | chr8_2:19344727-19344746 | Msa1238690:CDS | 60.0% | |
| GCCACCGGAACACCAGTTAC+CGG | + | chr8_2:19344731-19344750 | None:intergenic | 60.0% | |
| GTAACTGGTGTTCCGGTGGC+CGG | - | chr8_2:19344731-19344750 | Msa1238690:CDS | 60.0% | |
| TCCTGCAGCAGAGTTGCAGC+AGG | - | chr8_2:19340278-19340297 | Msa1238690:intron | 60.0% | |
| CCTGCAGCAGAGTTGCAGCA+GGG | - | chr8_2:19340279-19340298 | Msa1238690:intron | 60.0% | |
| GGCGTTCCGGTGACCGGTAA+TGG | - | chr8_2:19340254-19340273 | Msa1238690:intron | 65.0% | |
| CCCTGCTGCAACTCTGCTGC+AGG | + | chr8_2:19340282-19340301 | None:intergenic | 65.0% | |
| GGTGTTCCGGTGGCCGGTAA+TGG | - | chr8_2:19344737-19344756 | Msa1238690:CDS | 65.0% | |
| CAGGAGCCATTACCGGCCAC+CGG | + | chr8_2:19344746-19344765 | None:intergenic | 65.0% | |
| CCCTGCTGCAACTCTGCTGC+AGG | + | chr8_2:19340282-19340301 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 19339803 | 19344938 | 19339803 | ID=Msa1238690;Name=Msa1238690 |
| chr8_2 | mRNA | 19339803 | 19344938 | 19339803 | ID=Msa1238690-mRNA-1;Parent=Msa1238690;Name=Msa1238690-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0.33|1|0|0|3|115|158 |
| chr8_2 | exon | 19339803 | 19340125 | 19339803 | ID=Msa1238690-mRNA-1:exon:7168;Parent=Msa1238690-mRNA-1 |
| chr8_2 | exon | 19344648 | 19344886 | 19344648 | ID=Msa1238690-mRNA-1:exon:7167;Parent=Msa1238690-mRNA-1 |
| chr8_2 | exon | 19344909 | 19344938 | 19344909 | ID=Msa1238690-mRNA-1:exon:7166;Parent=Msa1238690-mRNA-1 |
| chr8_2 | CDS | 19344909 | 19344938 | 19344909 | ID=Msa1238690-mRNA-1:cds;Parent=Msa1238690-mRNA-1 |
| chr8_2 | CDS | 19344648 | 19344886 | 19344648 | ID=Msa1238690-mRNA-1:cds;Parent=Msa1238690-mRNA-1 |
| chr8_2 | CDS | 19339918 | 19340125 | 19339918 | ID=Msa1238690-mRNA-1:cds;Parent=Msa1238690-mRNA-1 |
| chr8_2 | three_prime_UTR | 19339803 | 19339917 | 19339803 | ID=Msa1238690-mRNA-1:three_prime_utr;Parent=Msa1238690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
