AlfalfaGEDB | Msa0119430

M. sativa cultivar zhongmu-4 / Msa0119430

KEGG: K08486
GO: -
PFAM: PF00804.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0119430	sp\|Q9ZSD4\|SY121_ARATH	72.587	259	71	0	27	285	30	288	5.82e-140	402

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0119430	B7FI20	99.346	306	2	0	1	306	1	306	0.0	626

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000820	Msa0119430	0.815376	9.543113e-52	-8.615850e-47
Msa0005260	Msa0119430	0.804664	1.938223e-49	-8.615850e-47
Msa0059900	Msa0119430	0.814074	1.854293e-51	-8.615850e-47
Msa0071470	Msa0119430	0.851120	1.091077e-60	-8.615850e-47
Msa0090090	Msa0119430	0.805147	1.536162e-49	-8.615850e-47
Msa0090380	Msa0119430	0.857243	1.863369e-62	-8.615850e-47
Msa0092970	Msa0119430	0.810948	8.942512e-51	-8.615850e-47
Msa0104810	Msa0119430	0.854449	1.221752e-61	-8.615850e-47
Msa0119430	Msa0133100	0.802908	4.487966e-49	-8.615850e-47
Msa0119430	Msa0137560	0.807543	4.802193e-50	-8.615850e-47
Msa0119430	Msa0137860	0.861789	8.014846e-64	-8.615850e-47
Msa0119430	Msa0151170	0.839172	1.857827e-57	-8.615850e-47
Msa0119430	Msa0162680	0.822078	2.871742e-53	-8.615850e-47
Msa0119430	Msa0170770	0.860120	2.577949e-63	-8.615850e-47
Msa0119430	Msa0181790	0.801137	1.037410e-48	-8.615850e-47
Msa0119430	Msa0187310	0.821099	4.835039e-53	-8.615850e-47
Msa0119430	Msa0193190	0.810222	1.283493e-50	-8.615850e-47
Msa0119430	Msa0196880	0.846869	1.656352e-59	-8.615850e-47
Msa0119430	Msa0223140	0.828903	6.939841e-55	-8.615850e-47
Msa0119430	Msa0224130	0.856602	2.878506e-62	-8.615850e-47
Msa0119430	Msa0225840	0.811028	8.592522e-51	-8.615850e-47
Msa0119430	Msa0225850	0.816017	6.868720e-52	-8.615850e-47
Msa0119430	Msa0260520	0.821018	5.044981e-53	-8.615850e-47
Msa0119430	Msa0260530	0.829062	6.351961e-55	-8.615850e-47
Msa0119430	Msa0264500	0.815053	1.125934e-51	-8.615850e-47
Msa0119430	Msa0264680	0.832050	1.179299e-55	-8.615850e-47
Msa0119430	Msa0265270	0.853149	2.892262e-61	-8.615850e-47
Msa0119430	Msa0273070	0.803813	2.914217e-49	-8.615850e-47
Msa0119430	Msa0276430	0.852595	4.165267e-61	-8.615850e-47
Msa0119430	Msa0302510	0.849319	3.490969e-60	-8.615850e-47
Msa0119430	Msa0302730	0.825569	4.364582e-54	-8.615850e-47
Msa0119430	Msa0306310	0.806454	8.162204e-50	-8.615850e-47
Msa0119430	Msa0316470	0.840960	6.347071e-58	-8.615850e-47
Msa0119430	Msa0339720	0.828448	8.938595e-55	-8.615850e-47
Msa0119430	Msa0345980	0.845208	4.687134e-59	-8.615850e-47
Msa0119430	Msa0365950	0.810123	1.347874e-50	-8.615850e-47
Msa0119430	Msa0376970	0.805795	1.123396e-49	-8.615850e-47
Msa0119430	Msa0393100	0.850938	1.228043e-60	-8.615850e-47
Msa0119430	Msa0402800	0.803142	4.015257e-49	-8.615850e-47
Msa0119430	Msa0443450	0.827908	1.206672e-54	-8.615850e-47
Msa0119430	Msa0476770	0.811736	6.032106e-51	-8.615850e-47
Msa0119430	Msa0484800	0.811996	5.294783e-51	-8.615850e-47
Msa0119430	Msa0488580	0.841858	3.682744e-58	-8.615850e-47
Msa0119430	Msa0497860	0.809254	2.072074e-50	-8.615850e-47
Msa0119430	Msa0521130	0.814964	1.178320e-51	-8.615850e-47
Msa0119430	Msa0524330	0.808516	2.980964e-50	-8.615850e-47
Msa0119430	Msa0524440	0.807735	4.370509e-50	-8.615850e-47
Msa0119430	Msa0534270	0.818976	1.479328e-52	-8.615850e-47
Msa0119430	Msa0579670	0.804845	1.776088e-49	-8.615850e-47
Msa0119430	Msa0588710	0.806384	8.442504e-50	-8.615850e-47
Msa0119430	Msa0590390	0.825341	4.941538e-54	-8.615850e-47
Msa0119430	Msa0604570	0.810415	1.165758e-50	-8.615850e-47
Msa0119430	Msa0615210	0.816374	5.715498e-52	-8.615850e-47
Msa0119430	Msa0729350	0.820610	6.263077e-53	-8.615850e-47
Msa0119430	Msa0734940	0.815523	8.850037e-52	-8.615850e-47
Msa0119430	Msa0769720	0.837983	3.766282e-57	-8.615850e-47
Msa0119430	Msa0804870	0.806229	9.103787e-50	-8.615850e-47
Msa0119430	Msa0807670	0.844746	6.247954e-59	-8.615850e-47
Msa0119430	Msa0807680	0.844332	8.072893e-59	-8.615850e-47
Msa0119430	Msa0820880	0.802590	5.219375e-49	-8.615850e-47
Msa0119430	Msa0829050	0.806239	9.058704e-50	-8.615850e-47
Msa0119430	Msa0945130	0.857806	1.270048e-62	-8.615850e-47
Msa0119430	Msa1025750	0.843287	1.537413e-58	-8.615850e-47
Msa0119430	Msa1064510	0.817344	3.461996e-52	-8.615850e-47
Msa0119430	Msa1089190	0.861385	1.064485e-63	-8.615850e-47
Msa0119430	Msa1109670	0.847411	1.176053e-59	-8.615850e-47
Msa0119430	Msa1131790	0.849012	4.247631e-60	-8.615850e-47
Msa0119430	Msa1153230	0.839314	1.705992e-57	-8.615850e-47
Msa0119430	Msa1157110	0.805851	1.093293e-49	-8.615850e-47
Msa0119430	Msa1180720	0.809485	1.848753e-50	-8.615850e-47
Msa0119430	Msa1218160	0.824579	7.476543e-54	-8.615850e-47
Msa0119430	Msa1225580	0.833851	4.204904e-56	-8.615850e-47
Msa0119430	Msa1231710	0.808126	3.609712e-50	-8.615850e-47
Msa0119430	Msa1246780	0.817280	3.579363e-52	-8.615850e-47
Msa0119430	Msa1246790	0.817482	3.223077e-52	-8.615850e-47
Msa0119430	Msa1286220	0.840722	7.325566e-58	-8.615850e-47
Msa0119430	Msa1312440	0.820167	7.913935e-53	-8.615850e-47
Msa0119430	Msa1355510	0.833516	5.100600e-56	-8.615850e-47
Msa0119430	Msa1364080	0.855521	5.968888e-62	-8.615850e-47
Msa0119430	Msa1367530	0.815716	8.015583e-52	-8.615850e-47
Msa0119430	Msa1369320	0.832447	9.406185e-56	-8.615850e-47
Msa0119430	Msa1397390	0.815967	7.046638e-52	-8.615850e-47
Msa0119430	Msa1413800	0.823312	1.482069e-53	-8.615850e-47
Msa0119430	Msa1420930	0.820734	5.866046e-53	-8.615850e-47
Msa0119430	Msa1422230	0.808830	2.554395e-50	-8.615850e-47
Msa0119430	Msa1424580	0.825512	4.502701e-54	-8.615850e-47
Msa0119430	Msa1433410	0.862087	6.495397e-64	-8.615850e-47
Msa0119430	Msa1435320	0.816022	6.850020e-52	-8.615850e-47
Msa0119430	Msa1436090	0.822616	2.154078e-53	-8.615850e-47
Msa0119430	Msa1443400	0.816082	6.643584e-52	-8.615850e-47
Msa0119430	Msa1443620	0.849855	2.473077e-60	-8.615850e-47
Msa0119430	Msa1448040	0.815047	1.129202e-51	-8.615850e-47
Msa0119430	Msa1452540	0.807341	5.299103e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0119430	MtrunA17_Chr1g0177121	99.346	306	2	0	1	306	1	306	0.0	626
Msa0119430	MtrunA17_Chr7g0267551	69.686	287	74	2	1	287	1	274	3.86e-145	410
Msa0119430	MtrunA17_Chr1g0177131	66.212	293	91	3	1	287	1	291	2.41e-140	399
Msa0119430	MtrunA17_Chr4g0048121	59.028	288	109	3	1	287	1	280	7.13e-123	354
Msa0119430	MtrunA17_Chr2g0281201	58.800	250	103	0	55	304	1	250	2.70e-115	333
Msa0119430	MtrunA17_Chr5g0398891	43.581	296	156	3	1	285	1	296	1.37e-86	262
Msa0119430	MtrunA17_Chr6g0461261	44.291	289	150	3	1	287	1	280	4.04e-80	245
Msa0119430	MtrunA17_Chr2g0322801	42.308	286	161	2	1	285	1	283	2.18e-73	228
Msa0119430	MtrunA17_Chr5g0404401	40.000	285	159	4	1	283	1	275	2.00e-62	199
Msa0119430	MtrunA17_Chr8g0370611	36.667	120	74	2	1	119	1	119	3.48e-15	71.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0119430	AT3G11820.1	72.587	259	71	0	27	285	30	288	5.92e-141	402
Msa0119430	AT3G11820.2	73.152	257	69	0	29	285	1	257	1.07e-140	400
Msa0119430	AT1G61290.1	55.814	301	125	1	1	301	1	293	3.22e-126	362
Msa0119430	AT1G61290.2	55.814	301	125	1	1	301	1	293	3.22e-126	362
Msa0119430	AT1G11250.1	57.491	287	109	1	1	287	1	274	2.38e-122	352
Msa0119430	AT3G52400.1	62.199	291	104	3	1	287	1	289	3.46e-120	348
Msa0119430	AT4G03330.1	52.941	306	135	2	1	304	1	299	4.76e-111	324
Msa0119430	AT3G03800.2	44.948	287	148	4	1	285	1	279	1.86e-79	244
Msa0119430	AT3G03800.1	44.948	287	148	4	1	285	1	279	1.86e-79	244
Msa0119430	AT1G08560.1	42.321	293	154	4	1	285	1	286	1.66e-77	239
Msa0119430	AT5G08080.1	46.316	285	146	2	1	285	1	278	1.15e-72	226
Msa0119430	AT5G08080.4	46.316	285	146	2	1	285	1	278	1.15e-72	226
Msa0119430	AT5G08080.3	44.595	296	146	4	1	285	1	289	9.22e-71	222
Msa0119430	AT2G18260.2	35.606	264	163	2	40	303	46	302	2.53e-57	187
Msa0119430	AT2G18260.1	35.606	264	163	2	40	303	46	302	2.53e-57	187
Msa0119430	AT5G08080.5	42.995	207	111	2	1	207	1	200	3.69e-38	135
Msa0119430	AT5G08080.2	42.995	207	111	2	1	207	1	200	3.69e-38	135

Find 93 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATGCCTCTCTTGAATTTCT+TGG	0.088352	1_3:+43396491	None:intergenic
GGAGCTTCACCAAGTGTTTA+TGG	0.187321	1_3:-43396437	Msa0119430:CDS
CTCCAATTCACATGCCAAAA+TGG	0.210351	1_3:+43395924	None:intergenic
CAGAAGATATTTGTTGTCTA+AGG	0.252058	1_3:+43397485	None:intergenic
AGCCACGTCAGCATCCATTT+TGG	0.265957	1_3:+43397684	None:intergenic
TTCATTCATATTCTCTAATC+AGG	0.295728	1_3:-43398056	Msa0119430:five_prime_UTR
TCCACTTTCTGCTATTCATT+TGG	0.309384	1_3:+43396296	None:intergenic
CGTAGATACTATACTGTTAC+AGG	0.311160	1_3:-43397442	Msa0119430:CDS
GTTTATGGACATGTCTGTTT+TGG	0.324253	1_3:-43396422	Msa0119430:CDS
TCCTCTCATGGGAGACTCTA+AGG	0.337274	1_3:+43397749	None:intergenic
GAAGGATATTCGCTCCAAAA+TGG	0.357939	1_3:-43397698	Msa0119430:CDS
TGTTTGCTCTACCTTGTTGT+TGG	0.360573	1_3:+43396527	None:intergenic
ACACCGGTTTGTGCGGTATT+CGG	0.365266	1_3:+43397847	None:intergenic
GAAGAAGCTTAAGGACTCTA+TGG	0.370355	1_3:-43397521	Msa0119430:CDS
AATATGAATGATTTATTCTC+TGG	0.376169	1_3:-43397943	Msa0119430:CDS
AGTAGGAGTTTGCCTGGTGC+TGG	0.388193	1_3:-43397595	Msa0119430:CDS
TCATGCTGCCTTGACAACTA+TGG	0.392633	1_3:-43396111	Msa0119430:three_prime_UTR
GAGTTTGCCTGGTGCTGGAC+CGG	0.392987	1_3:-43397590	Msa0119430:CDS
AATCATTCATATTGTTTATG+TGG	0.404302	1_3:+43397953	None:intergenic
TTTCTCTCGGTTCCGTAACT+CGG	0.405483	1_3:-43397917	Msa0119430:CDS
GAAGGGTCTTGCTCCTCTCA+TGG	0.411456	1_3:+43397737	None:intergenic
AGTTGACCATTACCATCATA+TGG	0.418010	1_3:+43395979	None:intergenic
TCAATCACAAGGTGAACAAT+TGG	0.420883	1_3:-43396398	Msa0119430:CDS
CAAACTCCTACTAGCCTCAT+TGG	0.425618	1_3:+43397606	None:intergenic
TGCTGGACCGGGTTCGTCCT+CGG	0.427607	1_3:-43397578	Msa0119430:CDS
TCACAGCTTTCGCGCTGTGA+AGG	0.430417	1_3:+43397719	None:intergenic
ATCACATGGTGGTGGTTGTC+TGG	0.434052	1_3:+43397883	None:intergenic
TCCAATTCACATGCCAAAAT+GGG	0.446182	1_3:+43395925	None:intergenic
GGCATGTGAATTGGAGGAGA+AGG	0.454810	1_3:-43395917	Msa0119430:three_prime_UTR
TGGTTTGAGGAAGAAGCTTA+AGG	0.454919	1_3:-43397530	Msa0119430:CDS
TATTCTCTGGCTCTTTCTCT+CGG	0.459600	1_3:-43397930	Msa0119430:CDS
AGGATATAGATGAATGTTCA+TGG	0.464081	1_3:-43395897	Msa0119430:three_prime_UTR
CACAGCTTTCGCGCTGTGAA+GGG	0.471963	1_3:+43397720	None:intergenic
CGTGCTAATTCGTACGTAAG+AGG	0.473617	1_3:-43396352	Msa0119430:CDS
AGTTTGCCTGGTGCTGGACC+GGG	0.485224	1_3:-43397589	Msa0119430:CDS
AGGTGTTAAAGAGGAGTTGA+AGG	0.487492	1_3:-43397794	Msa0119430:CDS
GTTGACCATTACCATCATAT+GGG	0.489496	1_3:+43395980	None:intergenic
GACGAACCCGGTCCAGCACC+AGG	0.494596	1_3:+43397583	None:intergenic
GACCGGGTTCGTCCTCGGAC+CGG	0.495705	1_3:-43397573	Msa0119430:CDS
AAGGGTCTTGCTCCTCTCAT+GGG	0.499489	1_3:+43397738	None:intergenic
TCCTACTAGCCTCATTGGAC+CGG	0.514248	1_3:+43397611	None:intergenic
CTCCAAAATGGATGCTGACG+TGG	0.519276	1_3:-43397686	Msa0119430:CDS
GTCCGGTCCGAGGACGAACC+CGG	0.520586	1_3:+43397571	None:intergenic
CATCCGTGGTGAGTGGTTTG+AGG	0.520607	1_3:-43397543	Msa0119430:CDS
GAGGCTAGTAGGAGTTTGCC+TGG	0.520730	1_3:-43397601	Msa0119430:CDS
TCACCGAATACCGCACAAAC+CGG	0.521309	1_3:-43397850	Msa0119430:CDS
TCCTAGCAACATGCAACTGT+TGG	0.522312	1_3:+43396323	None:intergenic
ACCGGTCCAATGAGGCTAGT+AGG	0.527254	1_3:-43397612	Msa0119430:CDS
GCGAAACTTGATCCGAGTTA+CGG	0.527599	1_3:+43397905	None:intergenic
AGAACCCCATATGATGGTAA+TGG	0.527767	1_3:-43395985	Msa0119430:three_prime_UTR
TGTGGTTTCAATTTCTGTTG+TGG	0.528141	1_3:+43397971	None:intergenic
GATAATGAGGAGAATTATGA+TGG	0.529658	1_3:+43396264	None:intergenic
ACCGGTCAAGTGCCTCGAGC+CGG	0.535814	1_3:+43397629	None:intergenic
AGAGATAGAGAGAAATCTCA+TGG	0.536636	1_3:-43396458	Msa0119430:CDS
ATTTCTAGAACCCCATATGA+TGG	0.542506	1_3:-43395991	Msa0119430:three_prime_UTR
CTATGATCAAGATGATAATG+AGG	0.545348	1_3:+43396251	None:intergenic
CTAATTCGTACGTAAGAGGT+GGG	0.547226	1_3:-43396348	Msa0119430:CDS
TCCGGCTCGAGGCACTTGAC+CGG	0.547953	1_3:-43397630	Msa0119430:CDS
AGAAGTCGAAGGTGTTAAAG+AGG	0.548635	1_3:-43397803	Msa0119430:CDS
TATACATACCAGTGGAAATG+AGG	0.555717	1_3:+43397389	None:intergenic
GTTGACCTCCTCATTTCCAC+TGG	0.557262	1_3:-43397397	Msa0119430:intron
ACCAAATGAATAGCAGAAAG+TGG	0.561512	1_3:-43396297	Msa0119430:CDS
GGTGGCTATGACTAGTTCAA+AGG	0.564085	1_3:-43396159	Msa0119430:three_prime_UTR
CAGACATGTCCATAAACACT+TGG	0.571715	1_3:+43396428	None:intergenic
TCCAACAGTTGCATGTTGCT+AGG	0.578150	1_3:-43396324	Msa0119430:CDS
ATACCATGCCATAGTTGTCA+AGG	0.581776	1_3:+43396103	None:intergenic
ACAAGGTAGAGCAAACATCA+TGG	0.584967	1_3:-43396521	Msa0119430:CDS
TCACCACGGATGTTCTAGTC+CGG	0.589863	1_3:+43397554	None:intergenic
AAGCTAAACTTGTTAAACTC+CGG	0.593069	1_3:-43397648	Msa0119430:CDS
TCACAGCGCGAAAGCTGTGA+AGG	0.594302	1_3:-43397716	Msa0119430:CDS
GCCTTAGAGTCTCCCATGAG+AGG	0.597298	1_3:-43397750	Msa0119430:CDS
GCTAATTCGTACGTAAGAGG+TGG	0.597539	1_3:-43396349	Msa0119430:CDS
GAGATGAACACCGGTTTGTG+CGG	0.601265	1_3:+43397840	None:intergenic
GTGATGACATTTCGATCACA+TGG	0.606578	1_3:+43397869	None:intergenic
ACATTTCGATCACATGGTGG+TGG	0.613048	1_3:+43397875	None:intergenic
TTGACCATTACCATCATATG+GGG	0.630270	1_3:+43395981	None:intergenic
GAATTTGTCGAGATGAACAC+CGG	0.632865	1_3:+43397831	None:intergenic
GGTAATGGTCAACTACCTTG+AGG	0.633266	1_3:-43395970	Msa0119430:three_prime_UTR
CTTCCTCAAACCACTCACCA+CGG	0.641880	1_3:+43397540	None:intergenic
ACTAGAACATCCGTGGTGAG+TGG	0.644934	1_3:-43397550	Msa0119430:CDS
AAATTCTTCGAAGAAGTCGA+AGG	0.646226	1_3:-43397814	Msa0119430:CDS
ACGAATTAGCACGTGCCACG+TGG	0.646541	1_3:+43396362	None:intergenic
GGCACTTGACCGGTCCAATG+AGG	0.650152	1_3:-43397620	Msa0119430:CDS
CAATCCAAGAAATTCAAGAG+AGG	0.658855	1_3:-43396495	Msa0119430:CDS
ACTTGTTAAACTCCGGCTCG+AGG	0.660615	1_3:-43397641	Msa0119430:CDS
CTGCCTTGACAACTATGGCA+TGG	0.680746	1_3:-43396106	Msa0119430:three_prime_UTR
ACATACCAGTGGAAATGAGG+AGG	0.681591	1_3:+43397392	None:intergenic
GGATGTTCTAGTCCGGTCCG+AGG	0.683883	1_3:+43397561	None:intergenic
TAATTCGTACGTAAGAGGTG+GGG	0.696518	1_3:-43396347	Msa0119430:CDS
GGACCGGACTAGAACATCCG+TGG	0.700708	1_3:-43397557	Msa0119430:CDS
ATATAGATGAATGTTCATGG+TGG	0.734211	1_3:-43395894	Msa0119430:three_prime_UTR
ATGACATTTCGATCACATGG+TGG	0.749280	1_3:+43397872	None:intergenic
GGATAATATTGAAAGCCACG+TGG	0.768363	1_3:-43396377	Msa0119430:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTATATAATTCATTCTTA+AGG	-	chr1_3:43396682-43396701	Msa0119430:intron	10.0%
!!	TTTATATAATTCATTCTTAA+GGG	-	chr1_3:43396683-43396702	Msa0119430:intron	10.0%
!!	TTAAATTTCATAAAGATTTA+TGG	+	chr1_3:43396820-43396839	None:intergenic	10.0%
!!!	TTTTATATAATTCATTCTTA+AGG	-	chr1_3:43396682-43396701	Msa0119430:intron	10.0%
!!	TTTATATAATTCATTCTTAA+GGG	-	chr1_3:43396683-43396702	Msa0119430:intron	10.0%
!!	TTAAATTTCATAAAGATTTA+TGG	+	chr1_3:43396820-43396839	None:intergenic	10.0%
!!!	TTTTAATATTATAATCTTGG+TGG	-	chr1_3:43397759-43397778	Msa0119430:CDS	15.0%
!!!	GATTTACTATTTTCATATAT+TGG	-	chr1_3:43397877-43397896	Msa0119430:CDS	15.0%
!!!	TTTTAATATTATAATCTTGG+TGG	-	chr1_3:43397759-43397778	Msa0119430:CDS	15.0%
!!!	GATTTACTATTTTCATATAT+TGG	-	chr1_3:43397877-43397896	Msa0119430:CDS	15.0%
!!	AATCATTCATATTGTTTATG+TGG	+	chr1_3:43395986-43396005	None:intergenic	20.0%
!!	AATATGAATGATTTATTCTC+TGG	-	chr1_3:43395993-43396012	Msa0119430:three_prime_UTR	20.0%
!!	GTAATCAAAATTTCAAACAT+GGG	+	chr1_3:43397009-43397028	None:intergenic	20.0%
!!	AGTAATCAAAATTTCAAACA+TGG	+	chr1_3:43397010-43397029	None:intergenic	20.0%
!!!	TGATTACTAAACTTTTACAT+TGG	-	chr1_3:43397022-43397041	Msa0119430:intron	20.0%
!!	ATCAATTAAGTTAGATCTTA+TGG	+	chr1_3:43397068-43397087	None:intergenic	20.0%
!!!	TTGATAATATCGATATTGTT+AGG	-	chr1_3:43397083-43397102	Msa0119430:intron	20.0%
!!!	AAAGGTTTGAGATTTAAATT+TGG	+	chr1_3:43397116-43397135	None:intergenic	20.0%
!!!	ACTTAGATTCATTTCTTTTT+AGG	+	chr1_3:43397195-43397214	None:intergenic	20.0%
!!	ATTAAAAAGAAACCTAAGTA+TGG	+	chr1_3:43397241-43397260	None:intergenic	20.0%
!!	CATATAACATATAAGCATAT+TGG	+	chr1_3:43397270-43397289	None:intergenic	20.0%
!!	TGTACATAATTCAAAGTATA+TGG	-	chr1_3:43397288-43397307	Msa0119430:intron	20.0%
!!!	ACATCTTTTTAATGTAACAT+AGG	-	chr1_3:43397356-43397375	Msa0119430:intron	20.0%
!!!	AACTATTTTTTAAGGACAAT+AGG	+	chr1_3:43397716-43397735	None:intergenic	20.0%
!!!	AGTCTCAAAACTATTTTTTA+AGG	+	chr1_3:43397724-43397743	None:intergenic	20.0%
!!!	TACTATTTTCATATATTGGT+TGG	-	chr1_3:43397881-43397900	Msa0119430:CDS	20.0%
!!	AATCATTCATATTGTTTATG+TGG	+	chr1_3:43395986-43396005	None:intergenic	20.0%
!!	AATATGAATGATTTATTCTC+TGG	-	chr1_3:43395993-43396012	Msa0119430:three_prime_UTR	20.0%
!!	GTAATCAAAATTTCAAACAT+GGG	+	chr1_3:43397009-43397028	None:intergenic	20.0%
!!	AGTAATCAAAATTTCAAACA+TGG	+	chr1_3:43397010-43397029	None:intergenic	20.0%
!!!	TGATTACTAAACTTTTACAT+TGG	-	chr1_3:43397022-43397041	Msa0119430:intron	20.0%
!!	ATCAATTAAGTTAGATCTTA+TGG	+	chr1_3:43397068-43397087	None:intergenic	20.0%
!!!	TTGATAATATCGATATTGTT+AGG	-	chr1_3:43397083-43397102	Msa0119430:intron	20.0%
!!!	AAAGGTTTGAGATTTAAATT+TGG	+	chr1_3:43397116-43397135	None:intergenic	20.0%
!!!	ACTTAGATTCATTTCTTTTT+AGG	+	chr1_3:43397195-43397214	None:intergenic	20.0%
!!	ATTAAAAAGAAACCTAAGTA+TGG	+	chr1_3:43397241-43397260	None:intergenic	20.0%
!!	CATATAACATATAAGCATAT+TGG	+	chr1_3:43397270-43397289	None:intergenic	20.0%
!!	TGTACATAATTCAAAGTATA+TGG	-	chr1_3:43397288-43397307	Msa0119430:intron	20.0%
!!!	ACATCTTTTTAATGTAACAT+AGG	-	chr1_3:43397356-43397375	Msa0119430:intron	20.0%
!!!	AACTATTTTTTAAGGACAAT+AGG	+	chr1_3:43397716-43397735	None:intergenic	20.0%
!!!	AGTCTCAAAACTATTTTTTA+AGG	+	chr1_3:43397724-43397743	None:intergenic	20.0%
!!!	TACTATTTTCATATATTGGT+TGG	-	chr1_3:43397881-43397900	Msa0119430:CDS	20.0%
!	TTCATTCATATTCTCTAATC+AGG	-	chr1_3:43395880-43395899	Msa0119430:three_prime_UTR	25.0%
!	TTGAAAAGAGAAAATAAGAG+AGG	-	chr1_3:43396726-43396745	Msa0119430:intron	25.0%
!	TGAAAAGAGAAAATAAGAGA+GGG	-	chr1_3:43396727-43396746	Msa0119430:intron	25.0%
!	CATACAACTAAAACTCTAAA+AGG	+	chr1_3:43397134-43397153	None:intergenic	25.0%
!!!	TAGTTTTGAGACTTTTCAAA+TGG	-	chr1_3:43397731-43397750	Msa0119430:CDS	25.0%
!!!	AGTTTTGAGACTTTTCAAAT+GGG	-	chr1_3:43397732-43397751	Msa0119430:CDS	25.0%
!!!	TTTTCATATATTGGTTGGTT+TGG	-	chr1_3:43397886-43397905	Msa0119430:CDS	25.0%
!!	TCAAGAATTTTATCCCATTT+TGG	-	chr1_3:43397998-43398017	Msa0119430:five_prime_UTR	25.0%
!	TTCATTCATATTCTCTAATC+AGG	-	chr1_3:43395880-43395899	Msa0119430:three_prime_UTR	25.0%
!	TTGAAAAGAGAAAATAAGAG+AGG	-	chr1_3:43396726-43396745	Msa0119430:intron	25.0%
!	TGAAAAGAGAAAATAAGAGA+GGG	-	chr1_3:43396727-43396746	Msa0119430:intron	25.0%
!	CATACAACTAAAACTCTAAA+AGG	+	chr1_3:43397134-43397153	None:intergenic	25.0%
!!!	TAGTTTTGAGACTTTTCAAA+TGG	-	chr1_3:43397731-43397750	Msa0119430:CDS	25.0%
!!!	AGTTTTGAGACTTTTCAAAT+GGG	-	chr1_3:43397732-43397751	Msa0119430:CDS	25.0%
!!!	TTTTCATATATTGGTTGGTT+TGG	-	chr1_3:43397886-43397905	Msa0119430:CDS	25.0%
!!	TCAAGAATTTTATCCCATTT+TGG	-	chr1_3:43397998-43398017	Msa0119430:five_prime_UTR	25.0%
!!!	TTGTTACTTTTTCTCGAAGT+TGG	+	chr1_3:43395922-43395941	None:intergenic	30.0%
	TGTTGTGGAAGAAAAAATAG+AGG	+	chr1_3:43395953-43395972	None:intergenic	30.0%
!!	AAGCTAAACTTGTTAAACTC+CGG	-	chr1_3:43396288-43396307	Msa0119430:CDS	30.0%
!!	CAGAAGATATTTGTTGTCTA+AGG	+	chr1_3:43396454-43396473	None:intergenic	30.0%
!!	TCATTCTTAAGGGTATCTTT+AGG	-	chr1_3:43396693-43396712	Msa0119430:intron	30.0%
!	ACAGAGCATCATACAAATTT+GGG	-	chr1_3:43396943-43396962	Msa0119430:intron	30.0%
!!!	ATTTCTTTTTAGGTCCGTAA+AGG	+	chr1_3:43397185-43397204	None:intergenic	30.0%
	TGTAAGCAAATACCATACTT+AGG	-	chr1_3:43397226-43397245	Msa0119430:intron	30.0%
	GATAATGAGGAGAATTATGA+TGG	+	chr1_3:43397675-43397694	None:intergenic	30.0%
!	CTATGATCAAGATGATAATG+AGG	+	chr1_3:43397688-43397707	None:intergenic	30.0%
	AGGATATAGATGAATGTTCA+TGG	-	chr1_3:43398039-43398058	Msa0119430:five_prime_UTR	30.0%
	ATATAGATGAATGTTCATGG+TGG	-	chr1_3:43398042-43398061	Msa0119430:five_prime_UTR	30.0%
!!!	TTGTTACTTTTTCTCGAAGT+TGG	+	chr1_3:43395922-43395941	None:intergenic	30.0%
	TGTTGTGGAAGAAAAAATAG+AGG	+	chr1_3:43395953-43395972	None:intergenic	30.0%
!!	AAGCTAAACTTGTTAAACTC+CGG	-	chr1_3:43396288-43396307	Msa0119430:CDS	30.0%
!!	CAGAAGATATTTGTTGTCTA+AGG	+	chr1_3:43396454-43396473	None:intergenic	30.0%
!!	TCATTCTTAAGGGTATCTTT+AGG	-	chr1_3:43396693-43396712	Msa0119430:intron	30.0%
!	ACAGAGCATCATACAAATTT+GGG	-	chr1_3:43396943-43396962	Msa0119430:intron	30.0%
!!!	ATTTCTTTTTAGGTCCGTAA+AGG	+	chr1_3:43397185-43397204	None:intergenic	30.0%
	TGTAAGCAAATACCATACTT+AGG	-	chr1_3:43397226-43397245	Msa0119430:intron	30.0%
	GATAATGAGGAGAATTATGA+TGG	+	chr1_3:43397675-43397694	None:intergenic	30.0%
!	CTATGATCAAGATGATAATG+AGG	+	chr1_3:43397688-43397707	None:intergenic	30.0%
	AGGATATAGATGAATGTTCA+TGG	-	chr1_3:43398039-43398058	Msa0119430:five_prime_UTR	30.0%
	ATATAGATGAATGTTCATGG+TGG	-	chr1_3:43398042-43398061	Msa0119430:five_prime_UTR	30.0%
	GGAAGAAAAAATAGAGGAGA+AGG	+	chr1_3:43395947-43395966	None:intergenic	35.0%
	TGTGGTTTCAATTTCTGTTG+TGG	+	chr1_3:43395968-43395987	None:intergenic	35.0%
	AAATTCTTCGAAGAAGTCGA+AGG	-	chr1_3:43396122-43396141	Msa0119430:three_prime_UTR	35.0%
	CGTAGATACTATACTGTTAC+AGG	-	chr1_3:43396494-43396513	Msa0119430:CDS	35.0%
	TATACATACCAGTGGAAATG+AGG	+	chr1_3:43396550-43396569	None:intergenic	35.0%
!	TGATGATGTATACATACCAG+TGG	+	chr1_3:43396558-43396577	None:intergenic	35.0%
!!	TTCTTAAGGGTATCTTTAGG+TGG	-	chr1_3:43396696-43396715	Msa0119430:intron	35.0%
!	GATGCTCTGTGCAAAAATTT+TGG	+	chr1_3:43396933-43396952	None:intergenic	35.0%
!	CACAGAGCATCATACAAATT+TGG	-	chr1_3:43396942-43396961	Msa0119430:intron	35.0%
!	CAGAGCATCATACAAATTTG+GGG	-	chr1_3:43396944-43396963	Msa0119430:intron	35.0%
	TCAAACATGGGAATTTCATC+TGG	+	chr1_3:43396997-43397016	None:intergenic	35.0%
!	GATGTTTGTCACTTCCTTTA+CGG	-	chr1_3:43397168-43397187	Msa0119430:intron	35.0%
	CAAAAAGCAATCCAACAACA+AGG	-	chr1_3:43397398-43397417	Msa0119430:CDS	35.0%
	CAATCCAAGAAATTCAAGAG+AGG	-	chr1_3:43397441-43397460	Msa0119430:CDS	35.0%
	AGAGATAGAGAGAAATCTCA+TGG	-	chr1_3:43397478-43397497	Msa0119430:CDS	35.0%
!	GTTTATGGACATGTCTGTTT+TGG	-	chr1_3:43397514-43397533	Msa0119430:CDS	35.0%
!!!	TCTGTTTTGGTTCAATCACA+AGG	-	chr1_3:43397527-43397546	Msa0119430:CDS	35.0%
	TCAATCACAAGGTGAACAAT+TGG	-	chr1_3:43397538-43397557	Msa0119430:CDS	35.0%
	ACCAAATGAATAGCAGAAAG+TGG	-	chr1_3:43397639-43397658	Msa0119430:CDS	35.0%
	TCCACTTTCTGCTATTCATT+TGG	+	chr1_3:43397643-43397662	None:intergenic	35.0%
!!	ATTTCTAGAACCCCATATGA+TGG	-	chr1_3:43397945-43397964	Msa0119430:exon	35.0%
	TTGACCATTACCATCATATG+GGG	+	chr1_3:43397958-43397977	None:intergenic	35.0%
	GTTGACCATTACCATCATAT+GGG	+	chr1_3:43397959-43397978	None:intergenic	35.0%
	AGTTGACCATTACCATCATA+TGG	+	chr1_3:43397960-43397979	None:intergenic	35.0%
!!!	TCTTGACTAGTTTTTCCTCA+AGG	+	chr1_3:43397984-43398003	None:intergenic	35.0%
	TCCAATTCACATGCCAAAAT+GGG	+	chr1_3:43398014-43398033	None:intergenic	35.0%
	GGAAGAAAAAATAGAGGAGA+AGG	+	chr1_3:43395947-43395966	None:intergenic	35.0%
	TGTGGTTTCAATTTCTGTTG+TGG	+	chr1_3:43395968-43395987	None:intergenic	35.0%
	AAATTCTTCGAAGAAGTCGA+AGG	-	chr1_3:43396122-43396141	Msa0119430:three_prime_UTR	35.0%
	CGTAGATACTATACTGTTAC+AGG	-	chr1_3:43396494-43396513	Msa0119430:CDS	35.0%
	TATACATACCAGTGGAAATG+AGG	+	chr1_3:43396550-43396569	None:intergenic	35.0%
!	TGATGATGTATACATACCAG+TGG	+	chr1_3:43396558-43396577	None:intergenic	35.0%
!!	TTCTTAAGGGTATCTTTAGG+TGG	-	chr1_3:43396696-43396715	Msa0119430:intron	35.0%
!	GATGCTCTGTGCAAAAATTT+TGG	+	chr1_3:43396933-43396952	None:intergenic	35.0%
!	CACAGAGCATCATACAAATT+TGG	-	chr1_3:43396942-43396961	Msa0119430:intron	35.0%
!	CAGAGCATCATACAAATTTG+GGG	-	chr1_3:43396944-43396963	Msa0119430:intron	35.0%
	TCAAACATGGGAATTTCATC+TGG	+	chr1_3:43396997-43397016	None:intergenic	35.0%
!	GATGTTTGTCACTTCCTTTA+CGG	-	chr1_3:43397168-43397187	Msa0119430:intron	35.0%
	CAAAAAGCAATCCAACAACA+AGG	-	chr1_3:43397398-43397417	Msa0119430:CDS	35.0%
	CAATCCAAGAAATTCAAGAG+AGG	-	chr1_3:43397441-43397460	Msa0119430:CDS	35.0%
	AGAGATAGAGAGAAATCTCA+TGG	-	chr1_3:43397478-43397497	Msa0119430:CDS	35.0%
!	GTTTATGGACATGTCTGTTT+TGG	-	chr1_3:43397514-43397533	Msa0119430:CDS	35.0%
!!!	TCTGTTTTGGTTCAATCACA+AGG	-	chr1_3:43397527-43397546	Msa0119430:CDS	35.0%
	TCAATCACAAGGTGAACAAT+TGG	-	chr1_3:43397538-43397557	Msa0119430:CDS	35.0%
	ACCAAATGAATAGCAGAAAG+TGG	-	chr1_3:43397639-43397658	Msa0119430:CDS	35.0%
	TCCACTTTCTGCTATTCATT+TGG	+	chr1_3:43397643-43397662	None:intergenic	35.0%
!!	ATTTCTAGAACCCCATATGA+TGG	-	chr1_3:43397945-43397964	Msa0119430:exon	35.0%
	TTGACCATTACCATCATATG+GGG	+	chr1_3:43397958-43397977	None:intergenic	35.0%
	GTTGACCATTACCATCATAT+GGG	+	chr1_3:43397959-43397978	None:intergenic	35.0%
	AGTTGACCATTACCATCATA+TGG	+	chr1_3:43397960-43397979	None:intergenic	35.0%
!!!	TCTTGACTAGTTTTTCCTCA+AGG	+	chr1_3:43397984-43398003	None:intergenic	35.0%
	TCCAATTCACATGCCAAAAT+GGG	+	chr1_3:43398014-43398033	None:intergenic	35.0%
!!	TATTCTCTGGCTCTTTCTCT+CGG	-	chr1_3:43396006-43396025	Msa0119430:three_prime_UTR	40.0%
	ATGACATTTCGATCACATGG+TGG	+	chr1_3:43396067-43396086	None:intergenic	40.0%
	GTGATGACATTTCGATCACA+TGG	+	chr1_3:43396070-43396089	None:intergenic	40.0%
	GAATTTGTCGAGATGAACAC+CGG	+	chr1_3:43396108-43396127	None:intergenic	40.0%
!!	AGAAGTCGAAGGTGTTAAAG+AGG	-	chr1_3:43396133-43396152	Msa0119430:three_prime_UTR	40.0%
	AGGTGTTAAAGAGGAGTTGA+AGG	-	chr1_3:43396142-43396161	Msa0119430:three_prime_UTR	40.0%
	GAAGGATATTCGCTCCAAAA+TGG	-	chr1_3:43396238-43396257	Msa0119430:CDS	40.0%
	TGGTTTGAGGAAGAAGCTTA+AGG	-	chr1_3:43396406-43396425	Msa0119430:CDS	40.0%
	GAAGAAGCTTAAGGACTCTA+TGG	-	chr1_3:43396415-43396434	Msa0119430:CDS	40.0%
!!	AGGTCAACAGTTTTGTCATC+TGG	+	chr1_3:43396527-43396546	None:intergenic	40.0%
!!	TAAGGGTATCTTTAGGTGGA+AGG	-	chr1_3:43396700-43396719	Msa0119430:intron	40.0%
!	GCTCTGTGCAAAAATTTTGG+AGG	+	chr1_3:43396930-43396949	None:intergenic	40.0%
!	TGTTTGCTCTACCTTGTTGT+TGG	+	chr1_3:43397412-43397431	None:intergenic	40.0%
	ACAAGGTAGAGCAAACATCA+TGG	-	chr1_3:43397415-43397434	Msa0119430:CDS	40.0%
	CATGCCTCTCTTGAATTTCT+TGG	+	chr1_3:43397448-43397467	None:intergenic	40.0%
	CAGACATGTCCATAAACACT+TGG	+	chr1_3:43397511-43397530	None:intergenic	40.0%
	GGATAATATTGAAAGCCACG+TGG	-	chr1_3:43397559-43397578	Msa0119430:CDS	40.0%
	CTAATTCGTACGTAAGAGGT+GGG	-	chr1_3:43397588-43397607	Msa0119430:CDS	40.0%
	TAATTCGTACGTAAGAGGTG+GGG	-	chr1_3:43397589-43397608	Msa0119430:CDS	40.0%
	ATACCATGCCATAGTTGTCA+AGG	+	chr1_3:43397836-43397855	None:intergenic	40.0%
	AGAACCCCATATGATGGTAA+TGG	-	chr1_3:43397951-43397970	Msa0119430:exon	40.0%
!!	TCCCATTTTGGCATGTGAAT+TGG	-	chr1_3:43398010-43398029	Msa0119430:five_prime_UTR	40.0%
	CTCCAATTCACATGCCAAAA+TGG	+	chr1_3:43398015-43398034	None:intergenic	40.0%
!!	CATTTTGGCATGTGAATTGG+AGG	-	chr1_3:43398013-43398032	Msa0119430:five_prime_UTR	40.0%
!!	TATTCTCTGGCTCTTTCTCT+CGG	-	chr1_3:43396006-43396025	Msa0119430:three_prime_UTR	40.0%
	ATGACATTTCGATCACATGG+TGG	+	chr1_3:43396067-43396086	None:intergenic	40.0%
	GTGATGACATTTCGATCACA+TGG	+	chr1_3:43396070-43396089	None:intergenic	40.0%
	GAATTTGTCGAGATGAACAC+CGG	+	chr1_3:43396108-43396127	None:intergenic	40.0%
!!	AGAAGTCGAAGGTGTTAAAG+AGG	-	chr1_3:43396133-43396152	Msa0119430:three_prime_UTR	40.0%
	AGGTGTTAAAGAGGAGTTGA+AGG	-	chr1_3:43396142-43396161	Msa0119430:three_prime_UTR	40.0%
	GAAGGATATTCGCTCCAAAA+TGG	-	chr1_3:43396238-43396257	Msa0119430:CDS	40.0%
	TGGTTTGAGGAAGAAGCTTA+AGG	-	chr1_3:43396406-43396425	Msa0119430:CDS	40.0%
	GAAGAAGCTTAAGGACTCTA+TGG	-	chr1_3:43396415-43396434	Msa0119430:CDS	40.0%
!!	AGGTCAACAGTTTTGTCATC+TGG	+	chr1_3:43396527-43396546	None:intergenic	40.0%
!!	TAAGGGTATCTTTAGGTGGA+AGG	-	chr1_3:43396700-43396719	Msa0119430:intron	40.0%
!	GCTCTGTGCAAAAATTTTGG+AGG	+	chr1_3:43396930-43396949	None:intergenic	40.0%
!	TGTTTGCTCTACCTTGTTGT+TGG	+	chr1_3:43397412-43397431	None:intergenic	40.0%
	ACAAGGTAGAGCAAACATCA+TGG	-	chr1_3:43397415-43397434	Msa0119430:CDS	40.0%
	CATGCCTCTCTTGAATTTCT+TGG	+	chr1_3:43397448-43397467	None:intergenic	40.0%
	CAGACATGTCCATAAACACT+TGG	+	chr1_3:43397511-43397530	None:intergenic	40.0%
	GGATAATATTGAAAGCCACG+TGG	-	chr1_3:43397559-43397578	Msa0119430:CDS	40.0%
	CTAATTCGTACGTAAGAGGT+GGG	-	chr1_3:43397588-43397607	Msa0119430:CDS	40.0%
	TAATTCGTACGTAAGAGGTG+GGG	-	chr1_3:43397589-43397608	Msa0119430:CDS	40.0%
	ATACCATGCCATAGTTGTCA+AGG	+	chr1_3:43397836-43397855	None:intergenic	40.0%
	AGAACCCCATATGATGGTAA+TGG	-	chr1_3:43397951-43397970	Msa0119430:exon	40.0%
!!	TCCCATTTTGGCATGTGAAT+TGG	-	chr1_3:43398010-43398029	Msa0119430:five_prime_UTR	40.0%
	CTCCAATTCACATGCCAAAA+TGG	+	chr1_3:43398015-43398034	None:intergenic	40.0%
!!	CATTTTGGCATGTGAATTGG+AGG	-	chr1_3:43398013-43398032	Msa0119430:five_prime_UTR	40.0%
	TTTCTCTCGGTTCCGTAACT+CGG	-	chr1_3:43396019-43396038	Msa0119430:three_prime_UTR	45.0%
	GCGAAACTTGATCCGAGTTA+CGG	+	chr1_3:43396034-43396053	None:intergenic	45.0%
	ACATTTCGATCACATGGTGG+TGG	+	chr1_3:43396064-43396083	None:intergenic	45.0%
!	CAAACTCCTACTAGCCTCAT+TGG	+	chr1_3:43396333-43396352	None:intergenic	45.0%
	ACATACCAGTGGAAATGAGG+AGG	+	chr1_3:43396547-43396566	None:intergenic	45.0%
	GGAGCTTCACCAAGTGTTTA+TGG	-	chr1_3:43397499-43397518	Msa0119430:CDS	45.0%
	CGTGCTAATTCGTACGTAAG+AGG	-	chr1_3:43397584-43397603	Msa0119430:CDS	45.0%
	GCTAATTCGTACGTAAGAGG+TGG	-	chr1_3:43397587-43397606	Msa0119430:CDS	45.0%
	TCCAACAGTTGCATGTTGCT+AGG	-	chr1_3:43397612-43397631	Msa0119430:CDS	45.0%
	TCCTAGCAACATGCAACTGT+TGG	+	chr1_3:43397616-43397635	None:intergenic	45.0%
!	GGTGGCTATGACTAGTTCAA+AGG	-	chr1_3:43397777-43397796	Msa0119430:CDS	45.0%
	TCATGCTGCCTTGACAACTA+TGG	-	chr1_3:43397825-43397844	Msa0119430:CDS	45.0%
!	GGTAATGGTCAACTACCTTG+AGG	-	chr1_3:43397966-43397985	Msa0119430:five_prime_UTR	45.0%
	TTTCTCTCGGTTCCGTAACT+CGG	-	chr1_3:43396019-43396038	Msa0119430:three_prime_UTR	45.0%
	GCGAAACTTGATCCGAGTTA+CGG	+	chr1_3:43396034-43396053	None:intergenic	45.0%
	ACATTTCGATCACATGGTGG+TGG	+	chr1_3:43396064-43396083	None:intergenic	45.0%
!	CAAACTCCTACTAGCCTCAT+TGG	+	chr1_3:43396333-43396352	None:intergenic	45.0%
	ACATACCAGTGGAAATGAGG+AGG	+	chr1_3:43396547-43396566	None:intergenic	45.0%
	GGAGCTTCACCAAGTGTTTA+TGG	-	chr1_3:43397499-43397518	Msa0119430:CDS	45.0%
	CGTGCTAATTCGTACGTAAG+AGG	-	chr1_3:43397584-43397603	Msa0119430:CDS	45.0%
	GCTAATTCGTACGTAAGAGG+TGG	-	chr1_3:43397587-43397606	Msa0119430:CDS	45.0%
	TCCAACAGTTGCATGTTGCT+AGG	-	chr1_3:43397612-43397631	Msa0119430:CDS	45.0%
	TCCTAGCAACATGCAACTGT+TGG	+	chr1_3:43397616-43397635	None:intergenic	45.0%
!	GGTGGCTATGACTAGTTCAA+AGG	-	chr1_3:43397777-43397796	Msa0119430:CDS	45.0%
	TCATGCTGCCTTGACAACTA+TGG	-	chr1_3:43397825-43397844	Msa0119430:CDS	45.0%
!	GGTAATGGTCAACTACCTTG+AGG	-	chr1_3:43397966-43397985	Msa0119430:five_prime_UTR	45.0%
!!!	TATTTTTAATATTATAATCT+TGG	-	chr1_3:43397756-43397775	Msa0119430:CDS	5.0%
!!!	TATTTTTAATATTATAATCT+TGG	-	chr1_3:43397756-43397775	Msa0119430:CDS	5.0%
!!	ATCACATGGTGGTGGTTGTC+TGG	+	chr1_3:43396056-43396075	None:intergenic	50.0%
	TCACCGAATACCGCACAAAC+CGG	-	chr1_3:43396086-43396105	Msa0119430:three_prime_UTR	50.0%
!!	ACACCGGTTTGTGCGGTATT+CGG	+	chr1_3:43396092-43396111	None:intergenic	50.0%
!!	GAGATGAACACCGGTTTGTG+CGG	+	chr1_3:43396099-43396118	None:intergenic	50.0%
	TCCTCTCATGGGAGACTCTA+AGG	+	chr1_3:43396190-43396209	None:intergenic	50.0%
	AAGGGTCTTGCTCCTCTCAT+GGG	+	chr1_3:43396201-43396220	None:intergenic	50.0%
	CTCCAAAATGGATGCTGACG+TGG	-	chr1_3:43396250-43396269	Msa0119430:CDS	50.0%
!	AGCCACGTCAGCATCCATTT+TGG	+	chr1_3:43396255-43396274	None:intergenic	50.0%
!	ACTTGTTAAACTCCGGCTCG+AGG	-	chr1_3:43396295-43396314	Msa0119430:CDS	50.0%
!	TCCTACTAGCCTCATTGGAC+CGG	+	chr1_3:43396328-43396347	None:intergenic	50.0%
	TCACCACGGATGTTCTAGTC+CGG	+	chr1_3:43396385-43396404	None:intergenic	50.0%
	ACTAGAACATCCGTGGTGAG+TGG	-	chr1_3:43396386-43396405	Msa0119430:CDS	50.0%
	CTTCCTCAAACCACTCACCA+CGG	+	chr1_3:43396399-43396418	None:intergenic	50.0%
	GTTGACCTCCTCATTTCCAC+TGG	-	chr1_3:43396539-43396558	Msa0119430:CDS	50.0%
	CTGCCTTGACAACTATGGCA+TGG	-	chr1_3:43397830-43397849	Msa0119430:CDS	50.0%
	GGCATGTGAATTGGAGGAGA+AGG	-	chr1_3:43398019-43398038	Msa0119430:five_prime_UTR	50.0%
!!	ATCACATGGTGGTGGTTGTC+TGG	+	chr1_3:43396056-43396075	None:intergenic	50.0%
	TCACCGAATACCGCACAAAC+CGG	-	chr1_3:43396086-43396105	Msa0119430:three_prime_UTR	50.0%
!!	ACACCGGTTTGTGCGGTATT+CGG	+	chr1_3:43396092-43396111	None:intergenic	50.0%
!!	GAGATGAACACCGGTTTGTG+CGG	+	chr1_3:43396099-43396118	None:intergenic	50.0%
	TCCTCTCATGGGAGACTCTA+AGG	+	chr1_3:43396190-43396209	None:intergenic	50.0%
	AAGGGTCTTGCTCCTCTCAT+GGG	+	chr1_3:43396201-43396220	None:intergenic	50.0%
	CTCCAAAATGGATGCTGACG+TGG	-	chr1_3:43396250-43396269	Msa0119430:CDS	50.0%
!	AGCCACGTCAGCATCCATTT+TGG	+	chr1_3:43396255-43396274	None:intergenic	50.0%
!	ACTTGTTAAACTCCGGCTCG+AGG	-	chr1_3:43396295-43396314	Msa0119430:CDS	50.0%
!	TCCTACTAGCCTCATTGGAC+CGG	+	chr1_3:43396328-43396347	None:intergenic	50.0%
	TCACCACGGATGTTCTAGTC+CGG	+	chr1_3:43396385-43396404	None:intergenic	50.0%
	ACTAGAACATCCGTGGTGAG+TGG	-	chr1_3:43396386-43396405	Msa0119430:CDS	50.0%
	CTTCCTCAAACCACTCACCA+CGG	+	chr1_3:43396399-43396418	None:intergenic	50.0%
	GTTGACCTCCTCATTTCCAC+TGG	-	chr1_3:43396539-43396558	Msa0119430:CDS	50.0%
	CTGCCTTGACAACTATGGCA+TGG	-	chr1_3:43397830-43397849	Msa0119430:CDS	50.0%
	GGCATGTGAATTGGAGGAGA+AGG	-	chr1_3:43398019-43398038	Msa0119430:five_prime_UTR	50.0%
	GCCTTAGAGTCTCCCATGAG+AGG	-	chr1_3:43396186-43396205	Msa0119430:three_prime_UTR	55.0%
	GAAGGGTCTTGCTCCTCTCA+TGG	+	chr1_3:43396202-43396221	None:intergenic	55.0%
	CACAGCTTTCGCGCTGTGAA+GGG	+	chr1_3:43396219-43396238	None:intergenic	55.0%
	TCACAGCTTTCGCGCTGTGA+AGG	+	chr1_3:43396220-43396239	None:intergenic	55.0%
	TCACAGCGCGAAAGCTGTGA+AGG	-	chr1_3:43396220-43396239	Msa0119430:exon	55.0%
	ACCGGTCCAATGAGGCTAGT+AGG	-	chr1_3:43396324-43396343	Msa0119430:CDS	55.0%
	GAGGCTAGTAGGAGTTTGCC+TGG	-	chr1_3:43396335-43396354	Msa0119430:CDS	55.0%
	AGTAGGAGTTTGCCTGGTGC+TGG	-	chr1_3:43396341-43396360	Msa0119430:CDS	55.0%
	CATCCGTGGTGAGTGGTTTG+AGG	-	chr1_3:43396393-43396412	Msa0119430:CDS	55.0%
	ACGAATTAGCACGTGCCACG+TGG	+	chr1_3:43397577-43397596	None:intergenic	55.0%
	GCCTTAGAGTCTCCCATGAG+AGG	-	chr1_3:43396186-43396205	Msa0119430:three_prime_UTR	55.0%
	GAAGGGTCTTGCTCCTCTCA+TGG	+	chr1_3:43396202-43396221	None:intergenic	55.0%
	CACAGCTTTCGCGCTGTGAA+GGG	+	chr1_3:43396219-43396238	None:intergenic	55.0%
	TCACAGCTTTCGCGCTGTGA+AGG	+	chr1_3:43396220-43396239	None:intergenic	55.0%
	TCACAGCGCGAAAGCTGTGA+AGG	-	chr1_3:43396220-43396239	Msa0119430:exon	55.0%
	ACCGGTCCAATGAGGCTAGT+AGG	-	chr1_3:43396324-43396343	Msa0119430:CDS	55.0%
	GAGGCTAGTAGGAGTTTGCC+TGG	-	chr1_3:43396335-43396354	Msa0119430:CDS	55.0%
	AGTAGGAGTTTGCCTGGTGC+TGG	-	chr1_3:43396341-43396360	Msa0119430:CDS	55.0%
	CATCCGTGGTGAGTGGTTTG+AGG	-	chr1_3:43396393-43396412	Msa0119430:CDS	55.0%
	ACGAATTAGCACGTGCCACG+TGG	+	chr1_3:43397577-43397596	None:intergenic	55.0%
	GGCACTTGACCGGTCCAATG+AGG	-	chr1_3:43396316-43396335	Msa0119430:CDS	60.0%
!	GAGTTTGCCTGGTGCTGGAC+CGG	-	chr1_3:43396346-43396365	Msa0119430:CDS	60.0%
!	AGTTTGCCTGGTGCTGGACC+GGG	-	chr1_3:43396347-43396366	Msa0119430:CDS	60.0%
	GGATGTTCTAGTCCGGTCCG+AGG	+	chr1_3:43396378-43396397	None:intergenic	60.0%
!	GGACCGGACTAGAACATCCG+TGG	-	chr1_3:43396379-43396398	Msa0119430:CDS	60.0%
	GGCACTTGACCGGTCCAATG+AGG	-	chr1_3:43396316-43396335	Msa0119430:CDS	60.0%
!	GAGTTTGCCTGGTGCTGGAC+CGG	-	chr1_3:43396346-43396365	Msa0119430:CDS	60.0%
!	AGTTTGCCTGGTGCTGGACC+GGG	-	chr1_3:43396347-43396366	Msa0119430:CDS	60.0%
	GGATGTTCTAGTCCGGTCCG+AGG	+	chr1_3:43396378-43396397	None:intergenic	60.0%
!	GGACCGGACTAGAACATCCG+TGG	-	chr1_3:43396379-43396398	Msa0119430:CDS	60.0%
!	TCCGGCTCGAGGCACTTGAC+CGG	-	chr1_3:43396306-43396325	Msa0119430:CDS	65.0%
	ACCGGTCAAGTGCCTCGAGC+CGG	+	chr1_3:43396310-43396329	None:intergenic	65.0%
	TGCTGGACCGGGTTCGTCCT+CGG	-	chr1_3:43396358-43396377	Msa0119430:CDS	65.0%
!	TCCGGCTCGAGGCACTTGAC+CGG	-	chr1_3:43396306-43396325	Msa0119430:CDS	65.0%
	ACCGGTCAAGTGCCTCGAGC+CGG	+	chr1_3:43396310-43396329	None:intergenic	65.0%
	TGCTGGACCGGGTTCGTCCT+CGG	-	chr1_3:43396358-43396377	Msa0119430:CDS	65.0%
	GACGAACCCGGTCCAGCACC+AGG	+	chr1_3:43396356-43396375	None:intergenic	70.0%
	GACCGGGTTCGTCCTCGGAC+CGG	-	chr1_3:43396363-43396382	Msa0119430:CDS	70.0%
	GTCCGGTCCGAGGACGAACC+CGG	+	chr1_3:43396368-43396387	None:intergenic	70.0%
	GACGAACCCGGTCCAGCACC+AGG	+	chr1_3:43396356-43396375	None:intergenic	70.0%
	GACCGGGTTCGTCCTCGGAC+CGG	-	chr1_3:43396363-43396382	Msa0119430:CDS	70.0%
	GTCCGGTCCGAGGACGAACC+CGG	+	chr1_3:43396368-43396387	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	43395869	43398089	43395869	ID=Msa0119430;Name=Msa0119430
chr1_3	mRNA	43395869	43398089	43395869	ID=Msa0119430-mRNA-1;Parent=Msa0119430;Name=Msa0119430-mRNA-1;_AED=0.26;_eAED=0.26;_QI=127\|1\|1\|1\|1\|1\|2\|356\|306
chr1_3	exon	43395869	43396580	43395869	ID=Msa0119430-mRNA-1:exon:13054;Parent=Msa0119430-mRNA-1
chr1_3	exon	43397398	43398089	43397398	ID=Msa0119430-mRNA-1:exon:13053;Parent=Msa0119430-mRNA-1
chr1_3	five_prime_UTR	43397963	43398089	43397963	ID=Msa0119430-mRNA-1:five_prime_utr;Parent=Msa0119430-mRNA-1
chr1_3	CDS	43397398	43397962	43397398	ID=Msa0119430-mRNA-1:cds;Parent=Msa0119430-mRNA-1
chr1_3	CDS	43396225	43396580	43396225	ID=Msa0119430-mRNA-1:cds;Parent=Msa0119430-mRNA-1
chr1_3	three_prime_UTR	43395869	43396224	43395869	ID=Msa0119430-mRNA-1:three_prime_utr;Parent=Msa0119430-mRNA-1

Gene Sequence

>Msa0119430

ATGAATGATTTATTCTCTGGCTCTTTCTCTCGGTTCCGTAACTCGGATCAAGTTTCGCCAGACAACCACCACCATGTGATCGAAATGTCATCACCGAATACCGCACAAACCGGTGTTCATCTCGACAAATTCTTCGAAGAAGTCGAAGGTGTTAAAGAGGAGTTGAAGGAGCTAGATCGTCTCTACGAAAGCCTTAGAGTCTCCCATGAGAGGAGCAAGACCCTTCACAGCGCGAAAGCTGTGAAGGATATTCGCTCCAAAATGGATGCTGACGTGGCTTTAGCTCTTAAAAAAGCTAAACTTGTTAAACTCCGGCTCGAGGCACTTGACCGGTCCAATGAGGCTAGTAGGAGTTTGCCTGGTGCTGGACCGGGTTCGTCCTCGGACCGGACTAGAACATCCGTGGTGAGTGGTTTGAGGAAGAAGCTTAAGGACTCTATGGACAGCTTTAACAACCTTAGACAACAAATATCTTCTGAATACAGAGAAACTGTACAACGTAGATACTATACTGTTACAGGAGAGAATCCAGATGACAAAACTGTTGACCTCCTCATTTCCACTGGTGAAAGTGAAACATTTTTACAAAAAGCAATCCAACAACAAGGTAGAGCAAACATCATGGACACAATCCAAGAAATTCAAGAGAGGCATGACACAGTGAAAGAGATAGAGAGAAATCTCATGGAGCTTCACCAAGTGTTTATGGACATGTCTGTTTTGGTTCAATCACAAGGTGAACAATTGGATAATATTGAAAGCCACGTGGCACGTGCTAATTCGTACGTAAGAGGTGGGGTCCAACAGTTGCATGTTGCTAGGAAGCACCAAATGAATAGCAGAAAGTGGACTTGTGTTGCCATCATAATTCTCCTCATTATCATCTTGATCATAGTTTTACCTATTGTCCTTAAAAAATAG

Protein sequence

>Msa0119430

MNDLFSGSFSRFRNSDQVSPDNHHHVIEMSSPNTAQTGVHLDKFFEEVEGVKEELKELDRLYESLRVSHERSKTLHSAKAVKDIRSKMDADVALALKKAKLVKLRLEALDRSNEASRSLPGAGPGSSSDRTRTSVVSGLRKKLKDSMDSFNNLRQQISSEYRETVQRRYYTVTGENPDDKTVDLLISTGESETFLQKAIQQQGRANIMDTIQEIQERHDTVKEIERNLMELHQVFMDMSVLVQSQGEQLDNIESHVARANSYVRGGVQQLHVARKHQMNSRKWTCVAIIILLIIILIIVLPIVLKK*