Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086560 | RDX66901.1 | 49.650 | 143 | 62 | 4 | 122 | 257 | 43 | 182 | 4.14e-24 | 109 |
| Msa0086560 | RDX66901.1 | 63.707 | 259 | 86 | 4 | 3 | 260 | 54 | 305 | 6.77e-86 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086560 | sp|Q9LTE1|HIP14_ARATH | 52.500 | 80 | 36 | 2 | 135 | 213 | 7 | 85 | 1.38e-16 | 77.0 |
| Msa0086560 | sp|Q9LTE1|HIP14_ARATH | 37.226 | 137 | 61 | 7 | 2 | 135 | 4 | 118 | 9.54e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086560 | A0A371ELI2 | 49.650 | 143 | 62 | 4 | 122 | 257 | 43 | 182 | 1.98e-24 | 109 |
| Msa0086560 | A0A371ELI2 | 63.707 | 259 | 86 | 4 | 3 | 260 | 54 | 305 | 3.23e-86 | 268 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0086560 | 0.841925 | 3.534672e-58 | -8.615850e-47 |
| Msa0013280 | Msa0086560 | 0.839479 | 1.545924e-57 | -8.615850e-47 |
| Msa0038770 | Msa0086560 | 0.810284 | 1.244329e-50 | -8.615850e-47 |
| Msa0059900 | Msa0086560 | 0.806833 | 6.789270e-50 | -8.615850e-47 |
| Msa0071480 | Msa0086560 | 0.825303 | 5.045260e-54 | -8.615850e-47 |
| Msa0086560 | Msa0106530 | 0.824450 | 8.018177e-54 | -8.615850e-47 |
| Msa0086560 | Msa0119440 | 0.840696 | 7.442412e-58 | -8.615850e-47 |
| Msa0086560 | Msa0133100 | 0.934047 | 7.382127e-96 | -8.615850e-47 |
| Msa0086560 | Msa0152560 | 0.809622 | 1.727817e-50 | -8.615850e-47 |
| Msa0086560 | Msa0162690 | 0.823217 | 1.559646e-53 | -8.615850e-47 |
| Msa0086560 | Msa0187310 | 0.825490 | 4.556503e-54 | -8.615850e-47 |
| Msa0086560 | Msa0196880 | 0.807420 | 5.099297e-50 | -8.615850e-47 |
| Msa0086560 | Msa0224130 | 0.802999 | 4.296666e-49 | -8.615850e-47 |
| Msa0086560 | Msa0245540 | 0.811933 | 5.464765e-51 | -8.615850e-47 |
| Msa0086560 | Msa0259440 | 0.803946 | 2.734871e-49 | -8.615850e-47 |
| Msa0086560 | Msa0259580 | 0.803474 | 3.426276e-49 | -8.615850e-47 |
| Msa0086560 | Msa0305620 | 0.817945 | 2.534230e-52 | -8.615850e-47 |
| Msa0086560 | Msa0364790 | 0.844367 | 7.901962e-59 | -8.615850e-47 |
| Msa0086560 | Msa0377840 | 0.803018 | 4.259410e-49 | -8.615850e-47 |
| Msa0086560 | Msa0412260 | 0.801052 | 1.079914e-48 | -8.615850e-47 |
| Msa0086560 | Msa0418400 | 0.800895 | 1.162719e-48 | -8.615850e-47 |
| Msa0086560 | Msa0426560 | 0.820362 | 7.141754e-53 | -8.615850e-47 |
| Msa0086560 | Msa0456770 | 0.822301 | 2.548232e-53 | -8.615850e-47 |
| Msa0086560 | Msa0473140 | 0.813394 | 2.616782e-51 | -8.615850e-47 |
| Msa0086560 | Msa0517610 | 0.813385 | 2.629320e-51 | -8.615850e-47 |
| Msa0086560 | Msa0524330 | 0.825624 | 4.234772e-54 | -8.615850e-47 |
| Msa0086560 | Msa0524440 | 0.839731 | 1.329309e-57 | -8.615850e-47 |
| Msa0086560 | Msa0534870 | 0.805957 | 1.038569e-49 | -8.615850e-47 |
| Msa0086560 | Msa0631320 | 0.808181 | 3.513445e-50 | -8.615850e-47 |
| Msa0086560 | Msa0734940 | 0.809724 | 1.642960e-50 | -8.615850e-47 |
| Msa0086560 | Msa0748660 | 0.825745 | 3.963362e-54 | -8.615850e-47 |
| Msa0086560 | Msa0775560 | 0.803491 | 3.398108e-49 | -8.615850e-47 |
| Msa0086560 | Msa0807670 | 0.817332 | 3.484615e-52 | -8.615850e-47 |
| Msa0086560 | Msa0807680 | 0.807857 | 4.118205e-50 | -8.615850e-47 |
| Msa0086560 | Msa0860250 | 0.811570 | 6.553883e-51 | -8.615850e-47 |
| Msa0086560 | Msa0870060 | 0.803396 | 3.556559e-49 | -8.615850e-47 |
| Msa0086560 | Msa0935770 | 0.807752 | 4.334333e-50 | -8.615850e-47 |
| Msa0086560 | Msa0968050 | 0.830005 | 3.747138e-55 | -8.615850e-47 |
| Msa0086560 | Msa1078330 | 0.802195 | 6.296158e-49 | -8.615850e-47 |
| Msa0086560 | Msa1100930 | 0.821419 | 4.079514e-53 | -8.615850e-47 |
| Msa0086560 | Msa1238690 | 0.826190 | 3.108129e-54 | -8.615850e-47 |
| Msa0086560 | Msa1246700 | 0.815360 | 9.619883e-52 | -8.615850e-47 |
| Msa0086560 | Msa1353890 | 0.802706 | 4.939690e-49 | -8.615850e-47 |
| Msa0086560 | Msa1367530 | 0.838288 | 3.143824e-57 | -8.615850e-47 |
| Msa0086560 | Msa1376450 | 0.807595 | 4.681939e-50 | -8.615850e-47 |
| Msa0086560 | Msa1389760 | 0.914601 | 1.583744e-84 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086560 | MtrunA17_Chr1g0202501 | 97.656 | 128 | 3 | 0 | 133 | 260 | 3 | 130 | 6.08e-87 | 254 |
| Msa0086560 | MtrunA17_Chr1g0202501 | 53.731 | 134 | 57 | 2 | 1 | 134 | 1 | 129 | 1.11e-28 | 105 |
| Msa0086560 | MtrunA17_Chr1g0202541 | 94.118 | 136 | 7 | 1 | 1 | 135 | 1 | 136 | 4.52e-72 | 217 |
| Msa0086560 | MtrunA17_Chr1g0202541 | 55.970 | 134 | 51 | 4 | 133 | 259 | 3 | 135 | 4.82e-29 | 107 |
| Msa0086560 | MtrunA17_Chr1g0202561 | 77.857 | 140 | 25 | 4 | 1 | 135 | 1 | 139 | 2.43e-55 | 174 |
| Msa0086560 | MtrunA17_Chr1g0202561 | 51.471 | 136 | 57 | 2 | 133 | 259 | 3 | 138 | 2.39e-26 | 100 |
| Msa0086560 | MtrunA17_Chr1g0204291 | 80.741 | 135 | 23 | 2 | 1 | 135 | 1 | 132 | 4.17e-53 | 168 |
| Msa0086560 | MtrunA17_Chr1g0204291 | 52.632 | 133 | 53 | 4 | 133 | 259 | 3 | 131 | 4.05e-23 | 91.7 |
| Msa0086560 | MtrunA17_Chr1g0202581 | 80.741 | 135 | 23 | 2 | 1 | 135 | 1 | 132 | 2.27e-52 | 166 |
| Msa0086560 | MtrunA17_Chr1g0202581 | 48.485 | 132 | 60 | 4 | 133 | 259 | 3 | 131 | 5.00e-24 | 94.0 |
| Msa0086560 | MtrunA17_Chr6g0469651 | 58.571 | 140 | 37 | 2 | 133 | 260 | 3 | 133 | 1.33e-34 | 121 |
| Msa0086560 | MtrunA17_Chr6g0469651 | 54.676 | 139 | 51 | 3 | 1 | 134 | 1 | 132 | 1.11e-32 | 116 |
| Msa0086560 | MtrunA17_Chr6g0469571 | 56.716 | 134 | 47 | 2 | 1 | 134 | 1 | 123 | 2.31e-34 | 120 |
| Msa0086560 | MtrunA17_Chr6g0469571 | 53.030 | 132 | 48 | 4 | 133 | 260 | 3 | 124 | 1.53e-33 | 118 |
| Msa0086560 | MtrunA17_Chr6g0469551 | 55.970 | 134 | 48 | 2 | 1 | 134 | 1 | 123 | 6.91e-34 | 119 |
| Msa0086560 | MtrunA17_Chr6g0469551 | 52.273 | 132 | 49 | 4 | 133 | 260 | 3 | 124 | 4.78e-33 | 117 |
| Msa0086560 | MtrunA17_Chr6g0469681 | 56.296 | 135 | 49 | 3 | 1 | 134 | 1 | 126 | 1.04e-33 | 119 |
| Msa0086560 | MtrunA17_Chr6g0469681 | 51.562 | 128 | 59 | 1 | 133 | 260 | 3 | 127 | 1.36e-32 | 115 |
| Msa0086560 | MtrunA17_Chr6g0469591 | 55.970 | 134 | 48 | 2 | 1 | 134 | 1 | 123 | 6.45e-33 | 116 |
| Msa0086560 | MtrunA17_Chr6g0469591 | 51.515 | 132 | 50 | 4 | 133 | 260 | 3 | 124 | 7.60e-32 | 114 |
| Msa0086560 | MtrunA17_Chr8g0387471 | 50.000 | 128 | 61 | 2 | 133 | 260 | 3 | 127 | 1.12e-32 | 116 |
| Msa0086560 | MtrunA17_Chr8g0387471 | 45.985 | 137 | 60 | 3 | 1 | 134 | 1 | 126 | 4.90e-30 | 109 |
| Msa0086560 | MtrunA17_Chr6g0469671 | 74.286 | 70 | 18 | 0 | 1 | 70 | 1 | 70 | 5.14e-31 | 111 |
| Msa0086560 | MtrunA17_Chr6g0469671 | 61.765 | 68 | 26 | 0 | 133 | 200 | 3 | 70 | 1.42e-23 | 92.0 |
| Msa0086560 | MtrunA17_Chr7g0233181 | 47.899 | 119 | 47 | 1 | 1 | 119 | 1 | 104 | 1.07e-28 | 105 |
| Msa0086560 | MtrunA17_Chr7g0233181 | 54.054 | 74 | 34 | 0 | 133 | 206 | 3 | 76 | 3.27e-22 | 88.2 |
| Msa0086560 | MtrunA17_Chr7g0233191 | 50.435 | 115 | 42 | 2 | 1 | 115 | 1 | 100 | 1.18e-28 | 105 |
| Msa0086560 | MtrunA17_Chr7g0233191 | 41.228 | 114 | 55 | 2 | 133 | 246 | 3 | 104 | 1.05e-21 | 87.0 |
| Msa0086560 | MtrunA17_Chr7g0233251 | 49.565 | 115 | 43 | 2 | 1 | 115 | 1 | 100 | 2.77e-28 | 104 |
| Msa0086560 | MtrunA17_Chr7g0233251 | 43.443 | 122 | 53 | 3 | 133 | 250 | 3 | 112 | 3.59e-24 | 93.6 |
| Msa0086560 | MtrunA17_Chr7g0233201 | 48.696 | 115 | 44 | 2 | 1 | 115 | 1 | 100 | 6.50e-28 | 103 |
| Msa0086560 | MtrunA17_Chr7g0233201 | 40.351 | 114 | 56 | 2 | 133 | 246 | 3 | 104 | 2.25e-21 | 86.3 |
| Msa0086560 | MtrunA17_Chr7g0233231 | 43.902 | 123 | 56 | 1 | 1 | 123 | 1 | 110 | 3.98e-27 | 101 |
| Msa0086560 | MtrunA17_Chr7g0233231 | 42.105 | 114 | 54 | 2 | 133 | 246 | 3 | 104 | 8.57e-24 | 92.4 |
| Msa0086560 | MtrunA17_Chr6g0469541 | 61.842 | 76 | 29 | 0 | 1 | 76 | 1 | 76 | 5.54e-27 | 100 |
| Msa0086560 | MtrunA17_Chr6g0469541 | 45.378 | 119 | 49 | 4 | 133 | 247 | 3 | 109 | 4.68e-24 | 93.2 |
| Msa0086560 | MtrunA17_Chr7g0233211 | 63.158 | 76 | 28 | 0 | 1 | 76 | 1 | 76 | 9.75e-27 | 100 |
| Msa0086560 | MtrunA17_Chr7g0233211 | 42.105 | 114 | 54 | 2 | 133 | 246 | 3 | 104 | 7.16e-24 | 92.8 |
| Msa0086560 | MtrunA17_Chr7g0248671 | 57.353 | 68 | 29 | 0 | 1 | 68 | 1 | 68 | 3.70e-21 | 87.4 |
| Msa0086560 | MtrunA17_Chr7g0248671 | 36.994 | 173 | 61 | 4 | 133 | 260 | 3 | 172 | 1.36e-14 | 69.7 |
| Msa0086560 | MtrunA17_Chr3g0120541 | 44.444 | 81 | 40 | 4 | 2 | 77 | 4 | 84 | 2.37e-12 | 62.4 |
| Msa0086560 | MtrunA17_Chr8g0348361 | 41.912 | 136 | 54 | 3 | 147 | 260 | 17 | 149 | 6.31e-12 | 62.0 |
| Msa0086560 | MtrunA17_Chr8g0348361 | 43.919 | 148 | 69 | 3 | 1 | 134 | 1 | 148 | 5.68e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086560 | AT5G52760.1 | 52.500 | 80 | 36 | 2 | 135 | 213 | 7 | 85 | 1.41e-17 | 77.0 |
| Msa0086560 | AT5G52760.1 | 37.226 | 137 | 61 | 7 | 2 | 135 | 4 | 118 | 9.70e-15 | 69.3 |
| Msa0086560 | AT5G52740.1 | 54.286 | 70 | 30 | 1 | 1 | 70 | 1 | 68 | 1.84e-16 | 73.9 |
| Msa0086560 | AT5G52740.1 | 49.254 | 67 | 32 | 1 | 134 | 200 | 4 | 68 | 3.20e-14 | 67.8 |
| Msa0086560 | AT1G01490.1 | 53.623 | 69 | 31 | 1 | 133 | 200 | 3 | 71 | 1.05e-15 | 73.6 |
| Msa0086560 | AT1G01490.2 | 53.623 | 69 | 31 | 1 | 133 | 200 | 3 | 71 | 1.05e-15 | 73.6 |
| Msa0086560 | AT1G01490.4 | 53.623 | 69 | 31 | 1 | 133 | 200 | 30 | 98 | 2.72e-15 | 72.8 |
| Msa0086560 | AT5G52750.1 | 46.154 | 65 | 35 | 0 | 3 | 67 | 5 | 69 | 2.52e-12 | 63.2 |
| Msa0086560 | AT5G52750.1 | 44.615 | 65 | 36 | 0 | 133 | 197 | 5 | 69 | 3.15e-12 | 63.2 |
Find 56 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCAGTCTCTGGCCTTTC+AGG | 0.147290 | 1_2:+67285160 | Msa0086560:CDS |
| AAGGCAGTCTCTAATATTTC+AGG | 0.223869 | 1_2:+67289327 | Msa0086560:CDS |
| CTCCTGTTAAGGTCAATTTC+TGG | 0.257650 | 1_2:-67289498 | None:intergenic |
| AGGATCCTCTTCAACGCTTA+TGG | 0.283035 | 1_2:-67285767 | None:intergenic |
| CTCTTCTTTCTTAGGCTCCT+TGG | 0.291492 | 1_2:-67289593 | None:intergenic |
| GAAGCCAGCAGAGGAGAAAA+AGG | 0.295344 | 1_2:+67289621 | Msa0086560:CDS |
| AAAGAAAGATGAACCTAAAA+AGG | 0.304067 | 1_2:+67285621 | Msa0086560:CDS |
| ATTAATCCTTTCATGCTCTA+TGG | 0.308553 | 1_2:+67285688 | Msa0086560:CDS |
| TGGATCAATGTCTCCTATTA+AGG | 0.318014 | 1_2:-67285527 | None:intergenic |
| AGGGGTTGAGTCAGTTTCTT+TGG | 0.321514 | 1_2:+67289465 | Msa0086560:intron |
| GACAAGAAAATGACCTTAAT+AGG | 0.340701 | 1_2:+67285514 | Msa0086560:CDS |
| GACCAGAAATTGACCTTAAC+AGG | 0.348770 | 1_2:+67289496 | Msa0086560:CDS |
| CACTAACCTTCATATTGTTA+TGG | 0.358371 | 1_2:-67284891 | None:intergenic |
| ATTCATCTGATGATTATAAT+AGG | 0.369814 | 1_2:-67285722 | None:intergenic |
| GGTCCAACAGATAGTATCTT+AGG | 0.370404 | 1_2:-67289568 | None:intergenic |
| TTGATGAAAATTGTAATAAG+AGG | 0.391387 | 1_2:-67284840 | None:intergenic |
| GTCAGTTTCTTTGGATATGA+AGG | 0.403102 | 1_2:+67289474 | Msa0086560:CDS |
| TAGATGATGACACAGCCATT+AGG | 0.441354 | 1_2:-67285787 | None:intergenic |
| TGTGGTTGTGTCATCATCAT+AGG | 0.448817 | 1_2:-67289703 | None:intergenic |
| TCTTTCTTAGGCTCCTTGGC+TGG | 0.455295 | 1_2:-67289589 | None:intergenic |
| ACAGAAAGTTGTGTTGAAGT+TGG | 0.461760 | 1_2:+67285102 | Msa0086560:intron |
| AACGTCTATGTCTCCTGTTA+AGG | 0.469452 | 1_2:-67289509 | None:intergenic |
| TTCAGTTGGACCAGCTAAAG+AGG | 0.475094 | 1_2:+67285597 | Msa0086560:CDS |
| AAAGCTATGAAAGCAGTCTC+TGG | 0.485853 | 1_2:+67285151 | Msa0086560:CDS |
| CATCATCATAGGATAATGAT+AGG | 0.491712 | 1_2:-67289692 | None:intergenic |
| AGCTTAGCCACTACACGTAC+TGG | 0.496210 | 1_2:-67285547 | None:intergenic |
| TATAGTCTAAGTCTAATGTA+TGG | 0.501650 | 1_2:-67284714 | None:intergenic |
| CATGCTGAAATACTTTCAGT+TGG | 0.503143 | 1_2:+67285583 | Msa0086560:CDS |
| TAAGAGGGAAAGAAAAGTTA+CGG | 0.504708 | 1_2:-67284824 | None:intergenic |
| AATAAGAATTCAGCAGCTCC+TGG | 0.507008 | 1_2:+67289649 | Msa0086560:CDS |
| TGCATGTAGTGGGAAAGTTA+AGG | 0.513637 | 1_2:+67289533 | Msa0086560:CDS |
| ATTGAAGTGGTAATTTGAAG+AGG | 0.514412 | 1_2:-67284799 | None:intergenic |
| GCACGGTGGTATGAATTGTA+TGG | 0.520307 | 1_2:-67285745 | None:intergenic |
| TGATGATTATAATAGGTAGT+AGG | 0.521368 | 1_2:-67285715 | None:intergenic |
| CCGTGCCATAAGCGTTGAAG+AGG | 0.546888 | 1_2:+67285762 | Msa0086560:CDS |
| GGTGTACCATAGAGCATGAA+AGG | 0.548293 | 1_2:-67285694 | None:intergenic |
| TATGGAAGAGTTGATGATAG+AGG | 0.550477 | 1_2:-67284696 | None:intergenic |
| CATAGACGTTGTGCATGTAG+TGG | 0.552040 | 1_2:+67289522 | Msa0086560:CDS |
| TAGCTTCCATAACAATATGA+AGG | 0.555459 | 1_2:+67284885 | Msa0086560:exon |
| TACGTGTAGTGGCTAAGCTA+AGG | 0.568064 | 1_2:+67285551 | Msa0086560:CDS |
| CATCCTAAGATACTATCTGT+TGG | 0.572285 | 1_2:+67289565 | Msa0086560:CDS |
| TCACAAACCTTCACAAAACC+AGG | 0.572656 | 1_2:-67289667 | None:intergenic |
| TGATGAAAATTGTAATAAGA+GGG | 0.575554 | 1_2:-67284839 | None:intergenic |
| TAGTTAATTCAATACCTGAA+AGG | 0.578105 | 1_2:-67285174 | None:intergenic |
| ACAGAAAATAGTGCTGCAAG+TGG | 0.586119 | 1_2:+67289269 | Msa0086560:intron |
| AGCGTTGAAGAGGATCCTAA+TGG | 0.594188 | 1_2:+67285772 | Msa0086560:CDS |
| ACTATCTGTTGGACCAGCCA+AGG | 0.595856 | 1_2:+67289576 | Msa0086560:CDS |
| CATTGATCCAGTACGTGTAG+TGG | 0.602340 | 1_2:+67285540 | Msa0086560:CDS |
| ATAGACGTTGTGCATGTAGT+GGG | 0.603550 | 1_2:+67289523 | Msa0086560:CDS |
| TAACAGATGACACATGCACT+AGG | 0.606912 | 1_2:-67289754 | None:intergenic |
| CCTCTTCAACGCTTATGGCA+CGG | 0.607325 | 1_2:-67285762 | None:intergenic |
| AAAAGTTACGGAGATTGAAG+TGG | 0.624940 | 1_2:-67284812 | None:intergenic |
| ACATTACTATTACACTAGTG+TGG | 0.640232 | 1_2:+67289723 | Msa0086560:CDS |
| ACACTAGTGTAATAGTAATG+TGG | 0.647440 | 1_2:-67289721 | None:intergenic |
| TTATGGAAGCTACTGAGCTG+AGG | 0.657868 | 1_2:-67284874 | None:intergenic |
| CTTCAACGCTTATGGCACGG+TGG | 0.735189 | 1_2:-67285759 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTATTTTTTATTA+TGG | + | chr1_2:67288975-67288994 | Msa0086560:intron | 0.0% |
| !!! | ATCTAAATTTTTTTATATCA+AGG | + | chr1_2:67285805-67285824 | Msa0086560:intron | 10.0% |
| !! | AATTAATATAAGGAATAATA+AGG | - | chr1_2:67286529-67286548 | None:intergenic | 10.0% |
| !! | AACATGTTTAAATAATTAAA+AGG | + | chr1_2:67286633-67286652 | Msa0086560:intron | 10.0% |
| !!! | TTCATAAAAGTTTATTTTTT+TGG | + | chr1_2:67286674-67286693 | Msa0086560:intron | 10.0% |
| !! | CATACAAATAATAAATTTAA+TGG | - | chr1_2:67288017-67288036 | None:intergenic | 10.0% |
| !!! | ATACATTATCATATATTTTT+AGG | + | chr1_2:67288430-67288449 | Msa0086560:intron | 10.0% |
| !! | ACTTGAATTATTAAATAAAA+GGG | - | chr1_2:67288710-67288729 | None:intergenic | 10.0% |
| !! | AACTTGAATTATTAAATAAA+AGG | - | chr1_2:67288711-67288730 | None:intergenic | 10.0% |
| !! | TTTAGATTAATAAAGTGTAT+TGG | + | chr1_2:67285322-67285341 | Msa0086560:intron | 15.0% |
| !!! | GTATTTTCTTTCTTTATTTT+TGG | + | chr1_2:67285861-67285880 | Msa0086560:intron | 15.0% |
| !!! | AAACTTTTATGAAAGTTATT+TGG | - | chr1_2:67286667-67286686 | None:intergenic | 15.0% |
| !!! | ACTATTTCTTAATTTTGTAA+TGG | + | chr1_2:67286997-67287016 | Msa0086560:intron | 15.0% |
| !! | TTTATGGTTTCTTAAAAATA+AGG | + | chr1_2:67287476-67287495 | Msa0086560:intron | 15.0% |
| !! | CAAATAATAAATTTAATGGT+TGG | - | chr1_2:67288013-67288032 | None:intergenic | 15.0% |
| !! | TTTATTATTTGTATGTCAAT+TGG | + | chr1_2:67288022-67288041 | Msa0086560:intron | 15.0% |
| !! | TTATTATTTGTATGTCAATT+GGG | + | chr1_2:67288023-67288042 | Msa0086560:intron | 15.0% |
| !!! | TTAAAGTATCTAAAGATTAT+TGG | - | chr1_2:67288257-67288276 | None:intergenic | 15.0% |
| !!! | ACAATTTGAATTCATTTTAT+TGG | - | chr1_2:67289002-67289021 | None:intergenic | 15.0% |
| !! | AAAGAGAATAAATTTAATCA+TGG | + | chr1_2:67289435-67289454 | Msa0086560:intron | 15.0% |
| !!! | TTAACTTTTAGATTATTTGA+AGG | + | chr1_2:67289774-67289793 | Msa0086560:exon | 15.0% |
| !!! | TAACTTTTAGATTATTTGAA+GGG | + | chr1_2:67289775-67289794 | Msa0086560:exon | 15.0% |
| !! | TGATGAAAATTGTAATAAGA+GGG | - | chr1_2:67284842-67284861 | None:intergenic | 20.0% |
| !! | TTGATGAAAATTGTAATAAG+AGG | - | chr1_2:67284843-67284862 | None:intergenic | 20.0% |
| !! | TAGAAATTGTTCAAAAGAAA+AGG | - | chr1_2:67284990-67285009 | None:intergenic | 20.0% |
| !! | TAAAATATCGAACTTGAAAT+CGG | - | chr1_2:67285306-67285325 | None:intergenic | 20.0% |
| !!! | AAGTATTGATTCTATAGATT+TGG | - | chr1_2:67285410-67285429 | None:intergenic | 20.0% |
| !!! | TTCTTTTTATCATCCTTTTT+AGG | - | chr1_2:67285637-67285656 | None:intergenic | 20.0% |
| !! | TAAAAAGGATGATAAAAAGA+AGG | + | chr1_2:67285636-67285655 | Msa0086560:CDS | 20.0% |
| !! | ATTCATCTGATGATTATAAT+AGG | - | chr1_2:67285725-67285744 | None:intergenic | 20.0% |
| !! | ACATTATGTATTAGATTCTA+AGG | - | chr1_2:67286702-67286721 | None:intergenic | 20.0% |
| !! | CAAAATTAAGAAATAGTTCA+TGG | - | chr1_2:67286994-67287013 | None:intergenic | 20.0% |
| !! | GTGTCATATATAGTTTATTA+TGG | + | chr1_2:67287123-67287142 | Msa0086560:intron | 20.0% |
| !!! | AATTGCATTTTGATTTTACT+GGG | - | chr1_2:67287567-67287586 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | + | chr1_2:67287655-67287674 | Msa0086560:intron | 20.0% |
| !!! | GGGTATTATAATTTTTTTTG+AGG | + | chr1_2:67287792-67287811 | Msa0086560:intron | 20.0% |
| !! | AAATGAATGAAGACAATATA+TGG | - | chr1_2:67288076-67288095 | None:intergenic | 20.0% |
| !!! | TTCTTCTTATTTAAGAATCA+GGG | - | chr1_2:67288145-67288164 | None:intergenic | 20.0% |
| !!! | TTTCTTCTTATTTAAGAATC+AGG | - | chr1_2:67288146-67288165 | None:intergenic | 20.0% |
| !! | TATCTGATATATATCTAACA+CGG | - | chr1_2:67288234-67288253 | None:intergenic | 20.0% |
| !!! | TAGGATATTTCTTTTTTGAA+AGG | + | chr1_2:67288449-67288468 | Msa0086560:intron | 20.0% |
| !!! | TATTTTCCTTTTAAATACCT+TGG | + | chr1_2:67288848-67288867 | Msa0086560:intron | 20.0% |
| !!! | ATGAAATTAAATAGAAGCAT+AGG | - | chr1_2:67289184-67289203 | None:intergenic | 20.0% |
| !!! | GCTATTTTATTCATAAAATC+AGG | + | chr1_2:67289398-67289417 | Msa0086560:intron | 20.0% |
| !!! | ATTTTATTCATAAAATCAGG+AGG | + | chr1_2:67289401-67289420 | Msa0086560:intron | 20.0% |
| !!! | AACTTTTAGATTATTTGAAG+GGG | + | chr1_2:67289776-67289795 | Msa0086560:exon | 20.0% |
| ! | TATAGTCTAAGTCTAATGTA+TGG | - | chr1_2:67284717-67284736 | None:intergenic | 25.0% |
| ! | TAAAAGAGTGGTATTAATCA+AGG | - | chr1_2:67284929-67284948 | None:intergenic | 25.0% |
| ! | TGATAAAGAAGATAAAAGAG+TGG | - | chr1_2:67284941-67284960 | None:intergenic | 25.0% |
| ! | TATCAATGCTAAAGCATAAT+TGG | + | chr1_2:67284956-67284975 | Msa0086560:intron | 25.0% |
| !! | TTGAATTTGAAGTAGTTCTT+TGG | + | chr1_2:67285012-67285031 | Msa0086560:intron | 25.0% |
| ! | TAGTTAATTCAATACCTGAA+AGG | - | chr1_2:67285177-67285196 | None:intergenic | 25.0% |
| ! | AAAATATCGAACTTGAAATC+GGG | - | chr1_2:67285305-67285324 | None:intergenic | 25.0% |
| ! | TTGGAAATTGAAAATCTGAT+TGG | + | chr1_2:67285341-67285360 | Msa0086560:intron | 25.0% |
| ! | AAAGAAAGATGAACCTAAAA+AGG | + | chr1_2:67285621-67285640 | Msa0086560:CDS | 25.0% |
| ! | TGATGATTATAATAGGTAGT+AGG | - | chr1_2:67285718-67285737 | None:intergenic | 25.0% |
| ! | GTAAGTGTAGAATATCATAT+TGG | - | chr1_2:67285972-67285991 | None:intergenic | 25.0% |
| ! | GAACACAATTGTTAATACTT+AGG | - | chr1_2:67286061-67286080 | None:intergenic | 25.0% |
| ! | ATATTAAGAGTAAACTTTGC+TGG | + | chr1_2:67286166-67286185 | Msa0086560:intron | 25.0% |
| ! | GAAAGTTAATTCACTTTCTA+TGG | + | chr1_2:67286191-67286210 | Msa0086560:intron | 25.0% |
| ! | GAAGATTACATTGCATAATT+CGG | - | chr1_2:67286258-67286277 | None:intergenic | 25.0% |
| !! | GAAATGTCATTTGATATTTG+TGG | + | chr1_2:67286356-67286375 | Msa0086560:intron | 25.0% |
| ! | TTCCTTATATTAATTCGTCA+TGG | + | chr1_2:67286534-67286553 | Msa0086560:intron | 25.0% |
| ! | TACCATGACGAATTAATATA+AGG | - | chr1_2:67286539-67286558 | None:intergenic | 25.0% |
| ! | TTAATCACATGATCTAAGAA+GGG | - | chr1_2:67286733-67286752 | None:intergenic | 25.0% |
| ! | ATTAATCACATGATCTAAGA+AGG | - | chr1_2:67286734-67286753 | None:intergenic | 25.0% |
| !! | TTTTTCATGAAGTCTTTGAA+CGG | - | chr1_2:67286905-67286924 | None:intergenic | 25.0% |
| ! | AAAGACTTCATGAAAAAACT+CGG | + | chr1_2:67286908-67286927 | Msa0086560:intron | 25.0% |
| ! | CTACTCATAATTTATATGAG+TGG | + | chr1_2:67287057-67287076 | Msa0086560:intron | 25.0% |
| ! | AACTTCTACTTAACATAGTA+TGG | + | chr1_2:67287368-67287387 | Msa0086560:intron | 25.0% |
| ! | TAAAATTAAGCCAACCTATA+GGG | - | chr1_2:67287460-67287479 | None:intergenic | 25.0% |
| ! | ATAAAATTAAGCCAACCTAT+AGG | - | chr1_2:67287461-67287480 | None:intergenic | 25.0% |
| !!! | TATAGGTTGGCTTAATTTTA+TGG | + | chr1_2:67287460-67287479 | Msa0086560:intron | 25.0% |
| !!! | CTCGGTTCAATTTTTAAAAT+AGG | + | chr1_2:67287540-67287559 | Msa0086560:intron | 25.0% |
| !!! | ATTGCATTTTGATTTTACTG+GGG | - | chr1_2:67287566-67287585 | None:intergenic | 25.0% |
| !!! | GAATTGCATTTTGATTTTAC+TGG | - | chr1_2:67287568-67287587 | None:intergenic | 25.0% |
| ! | ATTGTTGTGATTCTTTCAAT+CGG | + | chr1_2:67287766-67287785 | Msa0086560:intron | 25.0% |
| !! | AAGACAATATATGGTTTTCA+GGG | - | chr1_2:67288067-67288086 | None:intergenic | 25.0% |
| !!! | TACTTTAAGATTTATGTCCT+AGG | + | chr1_2:67288269-67288288 | Msa0086560:intron | 25.0% |
| ! | TAACATTCATTGATAAGAAG+GGG | - | chr1_2:67288936-67288955 | None:intergenic | 25.0% |
| ! | CTAACATTCATTGATAAGAA+GGG | - | chr1_2:67288937-67288956 | None:intergenic | 25.0% |
| ! | TCTAACATTCATTGATAAGA+AGG | - | chr1_2:67288938-67288957 | None:intergenic | 25.0% |
| ! | AATGTCAATTACTTGTACTA+GGG | - | chr1_2:67289102-67289121 | None:intergenic | 25.0% |
| !!! | AACAAAGAAAAAAGCATTGA+AGG | + | chr1_2:67289308-67289327 | Msa0086560:CDS | 25.0% |
| !! | AATTTAATCATGGTTTTTGC+AGG | + | chr1_2:67289445-67289464 | Msa0086560:intron | 25.0% |
| !! | ATTTAATCATGGTTTTTGCA+GGG | + | chr1_2:67289446-67289465 | Msa0086560:intron | 25.0% |
| !! | TTCTTTTTCTCTTCTTTCTT+AGG | - | chr1_2:67289604-67289623 | None:intergenic | 25.0% |
| ATTGAAGTGGTAATTTGAAG+AGG | - | chr1_2:67284802-67284821 | None:intergenic | 30.0% | |
| TAAGAGGGAAAGAAAAGTTA+CGG | - | chr1_2:67284827-67284846 | None:intergenic | 30.0% | |
| TAGCTTCCATAACAATATGA+AGG | + | chr1_2:67284885-67284904 | Msa0086560:exon | 30.0% | |
| CACTAACCTTCATATTGTTA+TGG | - | chr1_2:67284894-67284913 | None:intergenic | 30.0% | |
| CATAACAATATGAAGGTTAG+TGG | + | chr1_2:67284892-67284911 | Msa0086560:intron | 30.0% | |
| TGTATTTGCAATATTGTTGC+AGG | + | chr1_2:67285463-67285482 | Msa0086560:intron | 30.0% | |
| GTATTTGCAATATTGTTGCA+GGG | + | chr1_2:67285464-67285483 | Msa0086560:intron | 30.0% | |
| TATTTGCAATATTGTTGCAG+GGG | + | chr1_2:67285465-67285484 | Msa0086560:intron | 30.0% | |
| GACAAGAAAATGACCTTAAT+AGG | + | chr1_2:67285514-67285533 | Msa0086560:CDS | 30.0% | |
| ATTAATCCTTTCATGCTCTA+TGG | + | chr1_2:67285688-67285707 | Msa0086560:CDS | 30.0% | |
| !!! | TTTTTTCTGATGTACAGTGT+TGG | + | chr1_2:67285898-67285917 | Msa0086560:intron | 30.0% |
| TACTTCAGAAAATTGAGTGA+TGG | + | chr1_2:67286027-67286046 | Msa0086560:intron | 30.0% | |
| TAGAGAATCCATTAATACCA+GGG | - | chr1_2:67286147-67286166 | None:intergenic | 30.0% | |
| ATAGAGAATCCATTAATACC+AGG | - | chr1_2:67286148-67286167 | None:intergenic | 30.0% | |
| CCATCATCACAAAAAGATTT+GGG | - | chr1_2:67286288-67286307 | None:intergenic | 30.0% | |
| ! | CCAAATCTTTTTGTGATGAT+GGG | + | chr1_2:67286286-67286305 | Msa0086560:intron | 30.0% |
| !! | CAAATCTTTTTGTGATGATG+GGG | + | chr1_2:67286287-67286306 | Msa0086560:intron | 30.0% |
| GGATACTATTAGTAAACCTA+AGG | + | chr1_2:67286377-67286396 | Msa0086560:intron | 30.0% | |
| TACTATTAGTAAACCTAAGG+AGG | + | chr1_2:67286380-67286399 | Msa0086560:intron | 30.0% | |
| TGACAATAATAGAAAGAGAC+CGG | - | chr1_2:67286842-67286861 | None:intergenic | 30.0% | |
| ! | TACGCTTTATTGGAAATACA+CGG | - | chr1_2:67286874-67286893 | None:intergenic | 30.0% |
| ! | TGACTATGTTTTCCATTAGA+CGG | - | chr1_2:67286960-67286979 | None:intergenic | 30.0% |
| GAGAATAGAGAATGAAATTG+AGG | + | chr1_2:67287019-67287038 | Msa0086560:intron | 30.0% | |
| AATAGAGAATGAAATTGAGG+TGG | + | chr1_2:67287022-67287041 | Msa0086560:intron | 30.0% | |
| CTCATAATTTATATGAGTGG+AGG | + | chr1_2:67287060-67287079 | Msa0086560:intron | 30.0% | |
| ATCGATCAAGTTAAGAGATA+AGG | + | chr1_2:67287330-67287349 | Msa0086560:intron | 30.0% | |
| CAAGTTAAGAGATAAGGATA+TGG | + | chr1_2:67287336-67287355 | Msa0086560:intron | 30.0% | |
| CTATGTTAAGTAGAAGTTCA+GGG | - | chr1_2:67287366-67287385 | None:intergenic | 30.0% | |
| ACTATGTTAAGTAGAAGTTC+AGG | - | chr1_2:67287367-67287386 | None:intergenic | 30.0% | |
| TTGTGAGCGATTTCAAAAAT+TGG | + | chr1_2:67287403-67287422 | Msa0086560:intron | 30.0% | |
| TAAAAATAAGGTTGCTGAAG+TGG | + | chr1_2:67287488-67287507 | Msa0086560:intron | 30.0% | |
| TTGTTGTGATTCTTTCAATC+GGG | + | chr1_2:67287767-67287786 | Msa0086560:intron | 30.0% | |
| ! | GAAGACAATATATGGTTTTC+AGG | - | chr1_2:67288068-67288087 | None:intergenic | 30.0% |
| GTATCAATCAGATACCTATT+TGG | + | chr1_2:67288293-67288312 | Msa0086560:intron | 30.0% | |
| AATCAGATACCTATTTGGAT+TGG | + | chr1_2:67288298-67288317 | Msa0086560:intron | 30.0% | |
| TCTAAAAGAATTGAGTATGC+AGG | - | chr1_2:67288489-67288508 | None:intergenic | 30.0% | |
| TTAGATACGTATCACATTGT+AGG | + | chr1_2:67288504-67288523 | Msa0086560:intron | 30.0% | |
| AAGAAGTCAACTTAAGTCTT+GGG | - | chr1_2:67288793-67288812 | None:intergenic | 30.0% | |
| ATGTCAATTACTTGTACTAG+GGG | - | chr1_2:67289101-67289120 | None:intergenic | 30.0% | |
| GAATGTCAATTACTTGTACT+AGG | - | chr1_2:67289103-67289122 | None:intergenic | 30.0% | |
| CACAAGATTGTTAGGAATTT+AGG | - | chr1_2:67289237-67289256 | None:intergenic | 30.0% | |
| GAACAAATCACAAGATTGTT+AGG | - | chr1_2:67289245-67289264 | None:intergenic | 30.0% | |
| ! | TTTAATCATGGTTTTTGCAG+GGG | + | chr1_2:67289447-67289466 | Msa0086560:intron | 30.0% |
| CATCATCATAGGATAATGAT+AGG | - | chr1_2:67289695-67289714 | None:intergenic | 30.0% | |
| ACACTAGTGTAATAGTAATG+TGG | - | chr1_2:67289724-67289743 | None:intergenic | 30.0% | |
| ACATTACTATTACACTAGTG+TGG | + | chr1_2:67289723-67289742 | Msa0086560:CDS | 30.0% | |
| AAAAGTTACGGAGATTGAAG+TGG | - | chr1_2:67284815-67284834 | None:intergenic | 35.0% | |
| ACAGAAAGTTGTGTTGAAGT+TGG | + | chr1_2:67285102-67285121 | Msa0086560:intron | 35.0% | |
| TAGATGTGGATGATTGTGTA+TGG | + | chr1_2:67285370-67285389 | Msa0086560:intron | 35.0% | |
| TGGATCAATGTCTCCTATTA+AGG | - | chr1_2:67285530-67285549 | None:intergenic | 35.0% | |
| CATGCTGAAATACTTTCAGT+TGG | + | chr1_2:67285583-67285602 | Msa0086560:CDS | 35.0% | |
| ! | TCTTTCTTTTCCTCTTTAGC+TGG | - | chr1_2:67285610-67285629 | None:intergenic | 35.0% |
| TCATAATACTCCACACAACA+TGG | - | chr1_2:67286105-67286124 | None:intergenic | 35.0% | |
| TAATACCAGGGATCAAATCT+TGG | - | chr1_2:67286135-67286154 | None:intergenic | 35.0% | |
| GATTTGATCCCTGGTATTAA+TGG | + | chr1_2:67286136-67286155 | Msa0086560:intron | 35.0% | |
| TTAAGAGTAAACTTTGCTGG+TGG | + | chr1_2:67286169-67286188 | Msa0086560:intron | 35.0% | |
| GTTAATTCACTTTCTATGGC+CGG | + | chr1_2:67286195-67286214 | Msa0086560:intron | 35.0% | |
| AACTTTGAGCTAGAGTGATT+CGG | - | chr1_2:67286221-67286240 | None:intergenic | 35.0% | |
| ! | CCCAAATCTTTTTGTGATGA+TGG | + | chr1_2:67286285-67286304 | Msa0086560:intron | 35.0% |
| CCCATCATCACAAAAAGATT+TGG | - | chr1_2:67286289-67286308 | None:intergenic | 35.0% | |
| !! | TGAACTCTACTTCTAAAGCA+AGG | + | chr1_2:67286334-67286353 | Msa0086560:intron | 35.0% |
| ATTAGTAAACCTAAGGAGGA+TGG | + | chr1_2:67286384-67286403 | Msa0086560:intron | 35.0% | |
| CTTGGATTTCGTAATATGAG+AGG | + | chr1_2:67286411-67286430 | Msa0086560:intron | 35.0% | |
| !! | AGAGGCGTTAATATCATCAA+TGG | + | chr1_2:67286429-67286448 | Msa0086560:intron | 35.0% |
| TAGCGAAAATATTACGATGC+CGG | + | chr1_2:67286820-67286839 | Msa0086560:intron | 35.0% | |
| CTTTATTGGAAATACACGGT+TGG | - | chr1_2:67286870-67286889 | None:intergenic | 35.0% | |
| GTGTATTTCCAATAAAGCGT+AGG | + | chr1_2:67286873-67286892 | Msa0086560:intron | 35.0% | |
| CGATAGTACGTAATAACCTT+TGG | + | chr1_2:67287083-67287102 | Msa0086560:intron | 35.0% | |
| CGATTTCAAAAATTGGTCCA+AGG | + | chr1_2:67287410-67287429 | Msa0086560:intron | 35.0% | |
| ATGTTACATGTGGTTTACCT+TGG | - | chr1_2:67287430-67287449 | None:intergenic | 35.0% | |
| !!! | TTACCTAACAGTGTCGTTTT+TGG | + | chr1_2:67287684-67287703 | Msa0086560:intron | 35.0% |
| ATTCCAAAAACGACACTGTT+AGG | - | chr1_2:67287690-67287709 | None:intergenic | 35.0% | |
| TGTTGTGATTCTTTCAATCG+GGG | + | chr1_2:67287768-67287787 | Msa0086560:intron | 35.0% | |
| !! | AGAGTCCAATAAGTTGATCT+TGG | + | chr1_2:67287882-67287901 | Msa0086560:intron | 35.0% |
| CTCTTCCAAGATCAACTTAT+TGG | - | chr1_2:67287890-67287909 | None:intergenic | 35.0% | |
| TGTATGTCAATTGGGTCATT+TGG | + | chr1_2:67288031-67288050 | Msa0086560:intron | 35.0% | |
| ATTAATTTCTCGAGCTTTGC+AGG | - | chr1_2:67288630-67288649 | None:intergenic | 35.0% | |
| AAATTCGTATCGTGATTGCA+AGG | - | chr1_2:67288769-67288788 | None:intergenic | 35.0% | |
| AGAAGTCAACTTAAGTCTTG+GGG | - | chr1_2:67288792-67288811 | None:intergenic | 35.0% | |
| GAAGAAGTCAACTTAAGTCT+TGG | - | chr1_2:67288794-67288813 | None:intergenic | 35.0% | |
| ! | TCAGGTCCAAGGTATTTAAA+AGG | - | chr1_2:67288857-67288876 | None:intergenic | 35.0% |
| TGATTGTGATGACTTATGCA+TGG | - | chr1_2:67289059-67289078 | None:intergenic | 35.0% | |
| AAGGCAGTCTCTAATATTTC+AGG | + | chr1_2:67289327-67289346 | Msa0086560:CDS | 35.0% | |
| GTCAGTTTCTTTGGATATGA+AGG | + | chr1_2:67289474-67289493 | Msa0086560:CDS | 35.0% | |
| CATCCTAAGATACTATCTGT+TGG | + | chr1_2:67289565-67289584 | Msa0086560:CDS | 35.0% | |
| AAAGCTATGAAAGCAGTCTC+TGG | + | chr1_2:67285151-67285170 | Msa0086560:CDS | 40.0% | |
| CTGATTGGACAGTTTAGATG+TGG | + | chr1_2:67285356-67285375 | Msa0086560:intron | 40.0% | |
| TAGATGATGACACAGCCATT+AGG | - | chr1_2:67285790-67285809 | None:intergenic | 40.0% | |
| !! | ACAGTGTTGGTTGTAATACG+AGG | + | chr1_2:67285911-67285930 | Msa0086560:intron | 40.0% |
| TGTGTTCTGTCCAGAAACAA+AGG | + | chr1_2:67286074-67286093 | Msa0086560:intron | 40.0% | |
| CATCAATGGCATGATGAAGT+TGG | + | chr1_2:67286443-67286462 | Msa0086560:intron | 40.0% | |
| TCTTCACATTGATGTGGATG+GGG | - | chr1_2:67286764-67286783 | None:intergenic | 40.0% | |
| GTCTTCACATTGATGTGGAT+GGG | - | chr1_2:67286765-67286784 | None:intergenic | 40.0% | |
| TGTCTTCACATTGATGTGGA+TGG | - | chr1_2:67286766-67286785 | None:intergenic | 40.0% | |
| AGTGTGTCTTCACATTGATG+TGG | - | chr1_2:67286770-67286789 | None:intergenic | 40.0% | |
| TTGGAAATACACGGTTGGAT+GGG | - | chr1_2:67286865-67286884 | None:intergenic | 40.0% | |
| ATTGGAAATACACGGTTGGA+TGG | - | chr1_2:67286866-67286885 | None:intergenic | 40.0% | |
| TCATGAAGTCTTTGAACGGT+TGG | - | chr1_2:67286901-67286920 | None:intergenic | 40.0% | |
| !!! | ACGTTTTTTTCCGCCATGAA+TGG | + | chr1_2:67286931-67286950 | Msa0086560:intron | 40.0% |
| ! | CTATGTTTTCCATTAGACGG+AGG | - | chr1_2:67286957-67286976 | None:intergenic | 40.0% |
| ATAACCTTTGGACGATGTCT+AGG | + | chr1_2:67287095-67287114 | Msa0086560:intron | 40.0% | |
| ! | GCAACATCAATTGTTGCTTG+AGG | - | chr1_2:67287172-67287191 | None:intergenic | 40.0% |
| GCAACAATTGATGTTGCTCT+TGG | + | chr1_2:67287175-67287194 | Msa0086560:intron | 40.0% | |
| AGATGACTCTATCAACAGTG+AGG | - | chr1_2:67287228-67287247 | None:intergenic | 40.0% | |
| GTTAAGTAGAAGTTCAGGGT+CGG | - | chr1_2:67287362-67287381 | None:intergenic | 40.0% | |
| GTAACATTTCTCCACCCTAT+AGG | + | chr1_2:67287443-67287462 | Msa0086560:intron | 40.0% | |
| AATTAAGCCAACCTATAGGG+TGG | - | chr1_2:67287457-67287476 | None:intergenic | 40.0% | |
| AGCGTCCTATTTCATAGGAA+CGG | - | chr1_2:67287522-67287541 | None:intergenic | 40.0% | |
| TTCCTATGAAATAGGACGCT+CGG | + | chr1_2:67287522-67287541 | Msa0086560:intron | 40.0% | |
| GTAGGAAAGAGGAAAACGAA+TGG | + | chr1_2:67287724-67287743 | Msa0086560:intron | 40.0% | |
| TTTCACAATGCTCGTCGAAA+AGG | + | chr1_2:67287928-67287947 | Msa0086560:intron | 40.0% | |
| GGTATCTGATTGATACTCCT+AGG | - | chr1_2:67288289-67288308 | None:intergenic | 40.0% | |
| ! | GATTCTCTCTGATGCTGATT+TGG | + | chr1_2:67288377-67288396 | Msa0086560:intron | 40.0% |
| TAGAAGAATTGCCGTCCATT+TGG | + | chr1_2:67288602-67288621 | Msa0086560:intron | 40.0% | |
| ! | TGCAGCACTATTTTCTGTCA+TGG | - | chr1_2:67289267-67289286 | None:intergenic | 40.0% |
| ACAGAAAATAGTGCTGCAAG+TGG | + | chr1_2:67289269-67289288 | Msa0086560:intron | 40.0% | |
| GACCAGAAATTGACCTTAAC+AGG | + | chr1_2:67289496-67289515 | Msa0086560:CDS | 40.0% | |
| CTCCTGTTAAGGTCAATTTC+TGG | - | chr1_2:67289501-67289520 | None:intergenic | 40.0% | |
| AACGTCTATGTCTCCTGTTA+AGG | - | chr1_2:67289512-67289531 | None:intergenic | 40.0% | |
| ATAGACGTTGTGCATGTAGT+GGG | + | chr1_2:67289523-67289542 | Msa0086560:CDS | 40.0% | |
| ! | TGCATGTAGTGGGAAAGTTA+AGG | + | chr1_2:67289533-67289552 | Msa0086560:CDS | 40.0% |
| GGTCCAACAGATAGTATCTT+AGG | - | chr1_2:67289571-67289590 | None:intergenic | 40.0% | |
| AATAAGAATTCAGCAGCTCC+TGG | + | chr1_2:67289649-67289668 | Msa0086560:CDS | 40.0% | |
| TCACAAACCTTCACAAAACC+AGG | - | chr1_2:67289670-67289689 | None:intergenic | 40.0% | |
| TGTGGTTGTGTCATCATCAT+AGG | - | chr1_2:67289706-67289725 | None:intergenic | 40.0% | |
| TAACAGATGACACATGCACT+AGG | - | chr1_2:67289757-67289776 | None:intergenic | 40.0% | |
| TTATGGAAGCTACTGAGCTG+AGG | - | chr1_2:67284877-67284896 | None:intergenic | 45.0% | |
| ATCTCGTGACTCTATACCGT+CGG | + | chr1_2:67285259-67285278 | Msa0086560:intron | 45.0% | |
| AACATTTCAGACGTGACCGA+CGG | - | chr1_2:67285278-67285297 | None:intergenic | 45.0% | |
| CATTGATCCAGTACGTGTAG+TGG | + | chr1_2:67285540-67285559 | Msa0086560:CDS | 45.0% | |
| TACGTGTAGTGGCTAAGCTA+AGG | + | chr1_2:67285551-67285570 | Msa0086560:CDS | 45.0% | |
| TTCAGTTGGACCAGCTAAAG+AGG | + | chr1_2:67285597-67285616 | Msa0086560:CDS | 45.0% | |
| GGTGTACCATAGAGCATGAA+AGG | - | chr1_2:67285697-67285716 | None:intergenic | 45.0% | |
| GCACGGTGGTATGAATTGTA+TGG | - | chr1_2:67285748-67285767 | None:intergenic | 45.0% | |
| AGGATCCTCTTCAACGCTTA+TGG | - | chr1_2:67285770-67285789 | None:intergenic | 45.0% | |
| ! | AGCGTTGAAGAGGATCCTAA+TGG | + | chr1_2:67285772-67285791 | Msa0086560:CDS | 45.0% |
| ! | CATGGCTAGACCTTTGTTTC+TGG | - | chr1_2:67286087-67286106 | None:intergenic | 45.0% |
| AAAGGTCTAGCCATGTTGTG+TGG | + | chr1_2:67286092-67286111 | Msa0086560:intron | 45.0% | |
| GATGTCCAAGATTTGATCCC+TGG | + | chr1_2:67286127-67286146 | Msa0086560:intron | 45.0% | |
| !!! | CTTTTTGTGATGATGGGGAG+AGG | + | chr1_2:67286292-67286311 | Msa0086560:intron | 45.0% |
| GAAGACACACTCGTTGCTAA+TGG | + | chr1_2:67286779-67286798 | Msa0086560:intron | 45.0% | |
| GGTTGGATCCTACGCTTTAT+TGG | - | chr1_2:67286884-67286903 | None:intergenic | 45.0% | |
| TCATCCTAGACATCGTCCAA+AGG | - | chr1_2:67287102-67287121 | None:intergenic | 45.0% | |
| TGATGTTGCTCTTGGTAAGC+AGG | + | chr1_2:67287183-67287202 | Msa0086560:intron | 45.0% | |
| GGGTGGAGAAATGTTACATG+TGG | - | chr1_2:67287440-67287459 | None:intergenic | 45.0% | |
| CATTTCTCCACCCTATAGGT+TGG | + | chr1_2:67287447-67287466 | Msa0086560:intron | 45.0% | |
| AACCGAGCGTCCTATTTCAT+AGG | - | chr1_2:67287527-67287546 | None:intergenic | 45.0% | |
| TTTCCTCTTTCCTACGACGT+AGG | - | chr1_2:67287719-67287738 | None:intergenic | 45.0% | |
| TGTGATTCTTTCAATCGGGG+TGG | + | chr1_2:67287771-67287790 | Msa0086560:intron | 45.0% | |
| GTGATTCTTTCAATCGGGGT+GGG | + | chr1_2:67287772-67287791 | Msa0086560:intron | 45.0% | |
| ! | TTGAGGCCCATAGTTTGTAG+AGG | + | chr1_2:67287809-67287828 | Msa0086560:intron | 45.0% |
| ACCGAGCCTCTACAAACTAT+GGG | - | chr1_2:67287818-67287837 | None:intergenic | 45.0% | |
| TCTTCATTCATTTGCCCAGC+TGG | + | chr1_2:67288083-67288102 | Msa0086560:intron | 45.0% | |
| AGCACGAGACCAATCCAAAT+AGG | - | chr1_2:67288310-67288329 | None:intergenic | 45.0% | |
| !! | CTCTCTGATGCTGATTTGGA+CGG | + | chr1_2:67288381-67288400 | Msa0086560:intron | 45.0% |
| CAAAGTCCTGAGTTCGAATG+CGG | + | chr1_2:67288550-67288569 | Msa0086560:intron | 45.0% | |
| CTTTGCAGGATCCAAATGGA+CGG | - | chr1_2:67288616-67288635 | None:intergenic | 45.0% | |
| TGAAACTTAGCTCAGGTCCA+AGG | - | chr1_2:67288868-67288887 | None:intergenic | 45.0% | |
| GGTGTACTGAAACTTAGCTC+AGG | - | chr1_2:67288875-67288894 | None:intergenic | 45.0% | |
| AATCCTTGTAGTTGCAGCTG+CGG | + | chr1_2:67288895-67288914 | Msa0086560:intron | 45.0% | |
| AGGGGTTGAGTCAGTTTCTT+TGG | + | chr1_2:67289465-67289484 | Msa0086560:intron | 45.0% | |
| CATAGACGTTGTGCATGTAG+TGG | + | chr1_2:67289522-67289541 | Msa0086560:CDS | 45.0% | |
| CTCTTCTTTCTTAGGCTCCT+TGG | - | chr1_2:67289596-67289615 | None:intergenic | 45.0% | |
| AGAGAAAAAGAAGCCAGCAG+AGG | + | chr1_2:67289612-67289631 | Msa0086560:CDS | 45.0% | |
| ! | TGATCCTTTTTCTCCTCTGC+TGG | - | chr1_2:67289628-67289647 | None:intergenic | 45.0% |
| !!! | AAAAATTAATTCAATATTTT+TGG | + | chr1_2:67285836-67285855 | Msa0086560:intron | 5.0% |
| !! | AAAATAAATAATAAAACTAT+GGG | - | chr1_2:67288969-67288988 | None:intergenic | 5.0% |
| !! | AAAAATAAATAATAAAACTA+TGG | - | chr1_2:67288970-67288989 | None:intergenic | 5.0% |
| ! | AAAGCAGTCTCTGGCCTTTC+AGG | + | chr1_2:67285160-67285179 | Msa0086560:CDS | 50.0% |
| AGCTTAGCCACTACACGTAC+TGG | - | chr1_2:67285550-67285569 | None:intergenic | 50.0% | |
| CCTCTTCAACGCTTATGGCA+CGG | - | chr1_2:67285765-67285784 | None:intergenic | 50.0% | |
| ! | TTGAGCTAGAGTGATTCGGC+CGG | - | chr1_2:67286217-67286236 | None:intergenic | 50.0% |
| CATTAGACGGAGGCCATTCA+TGG | - | chr1_2:67286947-67286966 | None:intergenic | 50.0% | |
| CATGAATGGCCTCCGTCTAA+TGG | + | chr1_2:67286945-67286964 | Msa0086560:intron | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | + | chr1_2:67287514-67287533 | Msa0086560:intron | 50.0% | |
| GAATGTCACTCCTACGTCGT+AGG | + | chr1_2:67287706-67287725 | Msa0086560:intron | 50.0% | |
| ACTCCTACGTCGTAGGAAAG+AGG | + | chr1_2:67287713-67287732 | Msa0086560:intron | 50.0% | |
| ! | GCCCATAGTTTGTAGAGGCT+CGG | + | chr1_2:67287814-67287833 | Msa0086560:intron | 50.0% |
| CACCGAGCCTCTACAAACTA+TGG | - | chr1_2:67287819-67287838 | None:intergenic | 50.0% | |
| ! | TTTTGACACTCCCCAAGGTC+CGG | + | chr1_2:67287848-67287867 | Msa0086560:intron | 50.0% |
| CTTATTGGACTCTGCCACTC+AGG | - | chr1_2:67287875-67287894 | None:intergenic | 50.0% | |
| ATTCGAGCAACTAGCCAGCT+GGG | - | chr1_2:67288100-67288119 | None:intergenic | 50.0% | |
| AATTCGAGCAACTAGCCAGC+TGG | - | chr1_2:67288101-67288120 | None:intergenic | 50.0% | |
| CTAAGACCGCATTCGAACTC+AGG | - | chr1_2:67288559-67288578 | None:intergenic | 50.0% | |
| CGAGCTTTGCAGGATCCAAA+TGG | - | chr1_2:67288620-67288639 | None:intergenic | 50.0% | |
| GCAGCTGCAACTACAAGGAT+TGG | - | chr1_2:67288896-67288915 | None:intergenic | 50.0% | |
| ACTATCTGTTGGACCAGCCA+AGG | + | chr1_2:67289576-67289595 | Msa0086560:CDS | 50.0% | |
| TCTTTCTTAGGCTCCTTGGC+TGG | - | chr1_2:67289592-67289611 | None:intergenic | 50.0% | |
| GAAGCCAGCAGAGGAGAAAA+AGG | + | chr1_2:67289621-67289640 | Msa0086560:CDS | 50.0% | |
| !!! | AGCAGCTCCTGGTTTTGTGA+AGG | + | chr1_2:67289660-67289679 | Msa0086560:CDS | 50.0% |
| CTTCAACGCTTATGGCACGG+TGG | - | chr1_2:67285762-67285781 | None:intergenic | 55.0% | |
| !! | CCGTGCCATAAGCGTTGAAG+AGG | + | chr1_2:67285762-67285781 | Msa0086560:CDS | 55.0% |
| CCAAGTCTGCCATCCTCCTT+AGG | - | chr1_2:67286396-67286415 | None:intergenic | 55.0% | |
| CCTAAGGAGGATGGCAGACT+TGG | + | chr1_2:67286393-67286412 | Msa0086560:intron | 55.0% | |
| TAGACGGAGGCCATTCATGG+CGG | - | chr1_2:67286944-67286963 | None:intergenic | 55.0% | |
| AAGGTTGCTGAAGTGGCAGC+AGG | + | chr1_2:67287495-67287514 | Msa0086560:intron | 55.0% | |
| AGGTTGCTGAAGTGGCAGCA+GGG | + | chr1_2:67287496-67287515 | Msa0086560:intron | 55.0% | |
| ! | AGCGCTTTTGACACTCCCCA+AGG | + | chr1_2:67287843-67287862 | Msa0086560:intron | 55.0% |
| GCTCGTCGAAAAGGCAGTTC+TGG | + | chr1_2:67287937-67287956 | Msa0086560:intron | 55.0% | |
| AGACCGCAGCTGCAACTACA+AGG | - | chr1_2:67288901-67288920 | None:intergenic | 55.0% | |
| TGGACTCTGCCACTCAGGAC+CGG | - | chr1_2:67287870-67287889 | None:intergenic | 60.0% | |
| CCACTCAGGACCGGACCTTG+GGG | - | chr1_2:67287861-67287880 | None:intergenic | 65.0% | |
| GCCACTCAGGACCGGACCTT+GGG | - | chr1_2:67287862-67287881 | None:intergenic | 65.0% | |
| TGCCACTCAGGACCGGACCT+TGG | - | chr1_2:67287863-67287882 | None:intergenic | 65.0% | |
| CCCCAAGGTCCGGTCCTGAG+TGG | + | chr1_2:67287858-67287877 | Msa0086560:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 67284699 | 67289871 | 67284699 | ID=Msa0086560;Name=Msa0086560 |
| chr1_2 | mRNA | 67284699 | 67289871 | 67284699 | ID=Msa0086560-mRNA-1;Parent=Msa0086560;Name=Msa0086560-mRNA-1;_AED=0.13;_eAED=0.13;_QI=202|0.75|0.6|1|1|1|5|94|260 |
| chr1_2 | exon | 67284699 | 67284906 | 67284699 | ID=Msa0086560-mRNA-1:exon:22817;Parent=Msa0086560-mRNA-1 |
| chr1_2 | exon | 67285106 | 67285181 | 67285106 | ID=Msa0086560-mRNA-1:exon:22818;Parent=Msa0086560-mRNA-1 |
| chr1_2 | exon | 67285485 | 67285798 | 67285485 | ID=Msa0086560-mRNA-1:exon:22819;Parent=Msa0086560-mRNA-1 |
| chr1_2 | exon | 67289273 | 67289348 | 67289273 | ID=Msa0086560-mRNA-1:exon:22820;Parent=Msa0086560-mRNA-1 |
| chr1_2 | exon | 67289467 | 67289871 | 67289467 | ID=Msa0086560-mRNA-1:exon:22821;Parent=Msa0086560-mRNA-1 |
| chr1_2 | five_prime_UTR | 67284699 | 67284900 | 67284699 | ID=Msa0086560-mRNA-1:five_prime_utr;Parent=Msa0086560-mRNA-1 |
| chr1_2 | CDS | 67284901 | 67284906 | 67284901 | ID=Msa0086560-mRNA-1:cds;Parent=Msa0086560-mRNA-1 |
| chr1_2 | CDS | 67285106 | 67285181 | 67285106 | ID=Msa0086560-mRNA-1:cds;Parent=Msa0086560-mRNA-1 |
| chr1_2 | CDS | 67285485 | 67285798 | 67285485 | ID=Msa0086560-mRNA-1:cds;Parent=Msa0086560-mRNA-1 |
| chr1_2 | CDS | 67289273 | 67289348 | 67289273 | ID=Msa0086560-mRNA-1:cds;Parent=Msa0086560-mRNA-1 |
| chr1_2 | CDS | 67289467 | 67289777 | 67289467 | ID=Msa0086560-mRNA-1:cds;Parent=Msa0086560-mRNA-1 |
| chr1_2 | three_prime_UTR | 67289778 | 67289871 | 67289778 | ID=Msa0086560-mRNA-1:three_prime_utr;Parent=Msa0086560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
