AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0074350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074350 MtrunA17_Chr1g0182111 95.325 877 41 0 1 877 73 949 0.0 1650
Msa0074350 MtrunA17_Chr5g0417861 71.875 256 44 6 622 877 10 237 1.74e-109 336
Msa0074350 MtrunA17_Chr7g0222591 33.626 342 173 10 570 877 311 632 2.77e-33 137
Msa0074350 MtrunA17_Chr7g0262631 29.259 540 257 21 1 476 103 581 2.46e-25 113
Msa0074350 MtrunA17_Chr1g0182831 26.907 472 249 19 1 425 1 423 5.22e-19 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074350 AT3G53540.1 36.245 916 475 28 1 875 72 919 6.46e-135 426
Msa0074350 AT3G53540.2 36.035 913 481 27 1 875 103 950 3.91e-134 425
Msa0074350 AT4G28760.2 30.172 464 227 16 1 414 99 515 2.69e-30 129
Msa0074350 AT4G28760.1 30.172 464 227 16 1 414 99 515 2.69e-30 129
Msa0074350 AT2G39435.4 34.050 279 159 9 619 877 190 463 9.35e-26 112
Msa0074350 AT2G39435.3 34.050 279 159 9 619 877 190 463 9.35e-26 112
Msa0074350 AT2G39435.1 34.050 279 159 9 619 877 190 463 9.35e-26 112
Msa0074350 AT2G39435.5 34.050 279 159 9 619 877 190 463 9.35e-26 112
Msa0074350 AT2G39435.6 34.050 279 159 9 619 877 190 463 9.35e-26 112
Msa0074350 AT2G39435.2 33.333 267 153 9 619 865 190 451 5.90e-22 100
Msa0074350 AT5G43880.3 26.233 507 228 22 1 462 77 482 1.17e-21 101
Msa0074350 AT5G43880.2 26.233 507 228 22 1 462 77 482 1.17e-21 101
Msa0074350 AT5G43880.4 26.233 507 228 22 1 462 77 482 1.17e-21 101
Msa0074350 AT5G43880.1 26.233 507 228 22 1 462 77 482 1.17e-21 101
Msa0074350 AT2G20240.1 27.027 333 155 10 96 396 101 377 1.31e-14 78.6

Find 231 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGTTCTCATTTAAATT+TGG 0.111515 1_2:-48797091 Msa0074350:intron
CTCTTCTCCTCTCCCGTTTA+AGG 0.163515 1_2:+48795562 None:intergenic
TCTTCCTCTCCTAGATTTAA+AGG 0.174348 1_2:-48796086 Msa0074350:CDS
TGTTGTCCTAAAACCTAATA+TGG 0.174399 1_2:-48796348 Msa0074350:CDS
TCAGCTAATAACTTCTTAAT+TGG 0.212274 1_2:+48797037 None:intergenic
CTAAGGGGCTCAAAGGTTTC+AGG 0.216196 1_2:+48795354 None:intergenic
CTGATAATAATTTGGAAGTT+TGG 0.219189 1_2:-48793089 Msa0074350:CDS
CCTGCTTCATCTACTGTCTT+TGG 0.228985 1_2:-48795648 Msa0074350:CDS
CTTCTCTTGGATTCAGTTGC+TGG 0.236414 1_2:+48797004 None:intergenic
TGCTCAAACTGATAATAATT+TGG 0.237442 1_2:-48793097 Msa0074350:CDS
AAGGGATCAGGAAGAATTTA+AGG 0.251312 1_2:-48796825 Msa0074350:CDS
TTCATCTAAAGATGAATAAA+TGG 0.268462 1_2:-48792603 Msa0074350:three_prime_UTR
TGCAGTTCTCATTTAAATTT+GGG 0.277047 1_2:-48797090 Msa0074350:intron
GATAGTTCAAGCAGTGCTTC+TGG 0.278337 1_2:-48796050 Msa0074350:CDS
TCATCTTGTTCTGAATGTTT+TGG 0.281356 1_2:-48794306 Msa0074350:CDS
AGAAATGCAGCCAAACCTTT+TGG 0.297212 1_2:-48792901 Msa0074350:CDS
TCGGCTCGTGTCTTAGTAAA+AGG 0.315444 1_2:-48795234 Msa0074350:CDS
TTAACCATATTCTTCTAGAT+TGG 0.322681 1_2:+48792485 None:intergenic
TCAGCACGCAAGAATGTTCT+AGG 0.325404 1_2:+48795621 None:intergenic
TCCTTGTGCTGCTTGTTATT+AGG 0.326961 1_2:+48796926 None:intergenic
GATTCCAATCTAGAAGAATA+TGG 0.328479 1_2:-48792489 Msa0074350:three_prime_UTR
ATTGATAGTAGATGATTTAG+TGG 0.328822 1_2:-48792722 Msa0074350:CDS
TTCACCCAATCTTGAGGTTC+AGG 0.330620 1_2:-48795379 Msa0074350:CDS
ATGTTCAAAGTTCTCCATAT+TGG 0.331456 1_2:+48796505 None:intergenic
TCAGCATGATTTCCATGTTC+TGG 0.336312 1_2:+48796266 None:intergenic
CTCTCCCGTTTAAGGTCCTT+TGG 0.339239 1_2:+48795570 None:intergenic
TCTTCGGATAAGGTTCTTCC+TGG 0.346250 1_2:-48795261 Msa0074350:CDS
TTCTGAATCTTCTTCGGATA+AGG 0.357900 1_2:-48795271 Msa0074350:CDS
TACCAGTTTCCTTACCTTGT+AGG 0.359838 1_2:+48794268 None:intergenic
ACTTCGTAATGATCGATATA+TGG 0.362032 1_2:-48795595 Msa0074350:CDS
TACCTACCACTCTCTACCTT+TGG 0.370274 1_2:+48796779 None:intergenic
CTAGAGTATCCTTTAAATCT+AGG 0.370791 1_2:+48796077 None:intergenic
AAAGTTGCTGTTATTTCCTC+TGG 0.371025 1_2:+48796017 None:intergenic
TGTTAGAAGGAAATACATTA+TGG 0.371730 1_2:-48793185 Msa0074350:CDS
ATTCATTGAACAGAAGTTCA+TGG 0.372969 1_2:-48796717 Msa0074350:CDS
AGAGATGACATTGATGTAAT+AGG 0.373309 1_2:-48792760 Msa0074350:CDS
TTCCTTGGTTCCCTAGCATC+TGG 0.374335 1_2:+48792842 None:intergenic
ACAACAATCTTTGACGATCT+TGG 0.374861 1_2:+48796365 None:intergenic
TTGATACGTCGCTAGGCGTT+TGG 0.375451 1_2:+48796691 None:intergenic
TCATGTAGAACCAACCAATA+TGG 0.376303 1_2:-48796519 Msa0074350:CDS
TGTTTCTGTGTTTGAAGATC+TGG 0.379454 1_2:-48793043 Msa0074350:CDS
CGCTAGGCAGGCTGTCAAAA+CGG 0.380177 1_2:+48795799 None:intergenic
CATCATCCTCTACCTTTCCT+TGG 0.391677 1_2:+48792827 None:intergenic
GTGATTTGACTACTTGTTCA+AGG 0.392537 1_2:-48793008 Msa0074350:CDS
GCATTTCTCACCCATGGCTG+TGG 0.400191 1_2:+48792916 None:intergenic
GTGGAAATCTTCTAAACAAT+CGG 0.401053 1_2:-48797068 Msa0074350:five_prime_UTR
GGGTGAATCTTCTTCAAGAT+TGG 0.403956 1_2:+48795395 None:intergenic
CAGATTCCAACTTCAGCAAC+TGG 0.404643 1_2:+48793274 None:intergenic
AACACCTGGGGATCTTCTCT+TGG 0.405633 1_2:+48796991 None:intergenic
AGAGGAAATAACAGCAACTT+TGG 0.406142 1_2:-48796015 Msa0074350:CDS
ATTTGGACAAATAGATTATG+AGG 0.408517 1_2:-48792566 Msa0074350:three_prime_UTR
ACCCCTTTCCAATCACATTC+CGG 0.411094 1_2:-48796542 Msa0074350:CDS
ATTTCAATTTGAGGTCAGAT+AGG 0.413621 1_2:-48796481 Msa0074350:CDS
AATTCTAGAAGCACAATATC+TGG 0.414534 1_2:-48795507 Msa0074350:CDS
ATATGGTTAAATCGTAAAAT+CGG 0.415637 1_2:-48792472 Msa0074350:three_prime_UTR
GAGGATGTGAATAAGTTTAG+TGG 0.416713 1_2:-48792547 Msa0074350:three_prime_UTR
TGGTGCCAAAGGACCTTAAA+CGG 0.420078 1_2:-48795575 Msa0074350:CDS
TGGGCCTTCTGAATCTTCTT+CGG 0.420630 1_2:-48795277 Msa0074350:CDS
AGGAGCCTGAACCTCAAGAT+TGG 0.421532 1_2:+48795374 None:intergenic
GAAGGATCAAGAACAGAGAT+TGG 0.424727 1_2:+48794345 None:intergenic
ACCTACCACTCTCTACCTTT+GGG 0.426395 1_2:+48796780 None:intergenic
AGCCAATGTGCTGCTCCTGC+TGG 0.428930 1_2:+48795860 None:intergenic
TTCTGAGTTGGTTGAACCAC+TGG 0.431879 1_2:-48795736 Msa0074350:CDS
GCTAGGCAGGCTGTCAAAAC+GGG 0.434829 1_2:+48795800 None:intergenic
TAGGAGGAGCTCAAGGGATC+AGG 0.437081 1_2:-48796837 Msa0074350:CDS
AGAATTTAAGGATGTATTTG+AGG 0.444098 1_2:-48796813 Msa0074350:CDS
ATAGTTCAAGCAGTGCTTCT+GGG 0.448499 1_2:-48796049 Msa0074350:CDS
GACGTATCAGCTGGTTCTAC+TGG 0.450301 1_2:-48794444 Msa0074350:CDS
GTATCTTCTGAAATGTTAGA+AGG 0.450334 1_2:-48793198 Msa0074350:CDS
TTGAACATGATTTCAATTTG+AGG 0.450676 1_2:-48796490 Msa0074350:CDS
CAACAGGGGTGAATTACAAC+AGG 0.452060 1_2:-48796454 Msa0074350:CDS
GTATTCATCTTCAGATTTGA+AGG 0.452350 1_2:-48796759 Msa0074350:CDS
TATGGAGAACTGAAGATAGC+TGG 0.453058 1_2:-48793167 Msa0074350:CDS
CTACATGACCGGAATGTGAT+TGG 0.453884 1_2:+48796534 None:intergenic
TTGGCTGCATTTCTCACCCA+TGG 0.454936 1_2:+48792910 None:intergenic
AGGTCAGATAGGGAGTCAAC+AGG 0.455232 1_2:-48796470 Msa0074350:CDS
GTCTGTGCATTCACTGAAGC+AGG 0.455725 1_2:-48795469 Msa0074350:CDS
CAGCATGGAGATTCATGTCC+AGG 0.460685 1_2:+48794390 None:intergenic
CTATGTCTATTTAAGTCAAA+CGG 0.461553 1_2:+48795987 None:intergenic
CTCTCTGAAGCACCTGTACC+TGG 0.463051 1_2:-48794408 Msa0074350:CDS
TCTCCTGATTCTAGTTTCTC+CGG 0.466591 1_2:-48797319 Msa0074350:five_prime_UTR
AAAGGTAGAGGATGATGTCC+TGG 0.466697 1_2:-48792821 Msa0074350:CDS
CCGGGAGAATAGTTGTCCTT+AGG 0.466746 1_2:-48792666 Msa0074350:three_prime_UTR
GACCGGAATGTGATTGGAAA+GGG 0.468052 1_2:+48796540 None:intergenic
CTAAAAGACCTTGCACTGTC+AGG 0.468134 1_2:+48796191 None:intergenic
TGTTTGAAGATCTGGAAGAT+AGG 0.481147 1_2:-48793035 Msa0074350:CDS
GACAGCCTGCCTAGCGGGGA+AGG 0.481337 1_2:-48795792 Msa0074350:CDS
TATCAAATGAAAACACTGTT+GGG 0.482329 1_2:-48795296 Msa0074350:CDS
GAGGAAATAACAGCAACTTT+GGG 0.485008 1_2:-48796014 Msa0074350:CDS
GCAACTCCAGTTGCTGAAGT+TGG 0.486560 1_2:-48793280 Msa0074350:CDS
TCATAAACAGCAACAACATC+CGG 0.487223 1_2:-48797347 Msa0074350:five_prime_UTR
GTACCCTTCATTCTCTTACC+AGG 0.488941 1_2:+48795822 None:intergenic
AGGTGTTATAGCTAGATTGA+TGG 0.492264 1_2:-48796975 Msa0074350:CDS
CAACGGCGAACCTTCTGAGT+TGG 0.495337 1_2:-48795748 Msa0074350:CDS
TGAAACCTTCCCCGCTAGGC+AGG 0.495785 1_2:+48795787 None:intergenic
CCTAGTGATGTAAATCAAGT+AGG 0.498130 1_2:-48792637 Msa0074350:three_prime_UTR
CCTACTTGATTTACATCACT+AGG 0.499698 1_2:+48792637 None:intergenic
CTAGAATCAGGAGAGAAATC+CGG 0.500407 1_2:+48797328 None:intergenic
CCACCGGAGAAACTAGAATC+AGG 0.500712 1_2:+48797316 None:intergenic
CCTAAGGACAACTATTCTCC+CGG 0.501684 1_2:+48792666 None:intergenic
GATCGTCTAGGAGGAGCTCA+AGG 0.502385 1_2:-48796844 Msa0074350:CDS
GACAGATCATCTGTAAAAGA+AGG 0.502791 1_2:+48794327 None:intergenic
ATTGGTTGGTTCTACATGAC+CGG 0.509610 1_2:+48796523 None:intergenic
AAGAGGTGCAAGGCACCAGC+AGG 0.509861 1_2:-48795875 Msa0074350:CDS
CGAAGAAAATTCAATGCAAG+AGG 0.512210 1_2:-48795193 Msa0074350:intron
AAGACACGAGCCGATGATCC+AGG 0.514598 1_2:+48795243 None:intergenic
AAGCATCGCGATGGTTATCA+TGG 0.515516 1_2:-48796422 Msa0074350:CDS
TTTCTCTGCAACCTTGCCAC+CGG 0.516407 1_2:+48797300 None:intergenic
GGAGCCTGAACCTCAAGATT+GGG 0.516857 1_2:+48795375 None:intergenic
TTCTAGTTTCTCCGGTGGCA+AGG 0.517530 1_2:-48797311 Msa0074350:five_prime_UTR
ATTATCAGAGAGGTGGAAGA+TGG 0.517782 1_2:-48795910 Msa0074350:CDS
ATATTTCAGGACGTATCAGC+TGG 0.518195 1_2:-48794453 Msa0074350:intron
GCTAGATTGATGGGTCTTGA+CGG 0.518416 1_2:-48796965 Msa0074350:CDS
TCATTGAAACCTTCCCCGCT+AGG 0.518789 1_2:+48795783 None:intergenic
GCTGATATGCTAGCGTTCCC+TGG 0.518873 1_2:-48795840 Msa0074350:CDS
GTATCAAATGAAAACACTGT+TGG 0.522003 1_2:-48795297 Msa0074350:CDS
CTGGGTATCAGCAGCAAGGA+TGG 0.522721 1_2:-48795717 Msa0074350:CDS
CTACTTGTTCAAGGTCTGAA+AGG 0.522940 1_2:-48792999 Msa0074350:CDS
CCAACGCCTCAAGTGTATCA+TGG 0.523411 1_2:+48796645 None:intergenic
GTTGTCCTAAAACCTAATAT+GGG 0.523452 1_2:-48796347 Msa0074350:CDS
CCATGATACACTTGAGGCGT+TGG 0.524158 1_2:-48796645 Msa0074350:CDS
CATTTCTCACCCATGGCTGT+GGG 0.524711 1_2:+48792917 None:intergenic
ATCAATCTAGCTATAACACC+TGG 0.525093 1_2:+48796977 None:intergenic
GGTGCCAAAGGACCTTAAAC+GGG 0.527205 1_2:-48795574 Msa0074350:CDS
GGAGATTCATGTCCAGGTAC+AGG 0.532375 1_2:+48794396 None:intergenic
TGGAAATCTTCTAAACAATC+GGG 0.532665 1_2:-48797067 Msa0074350:five_prime_UTR
TTTATCTCTAAGGGGCTCAA+AGG 0.532888 1_2:+48795347 None:intergenic
TTTCAATTTGAGGTCAGATA+GGG 0.533938 1_2:-48796480 Msa0074350:CDS
TATCTGGTCACAAGAAGTCT+TGG 0.534254 1_2:-48795491 Msa0074350:CDS
ATCTACTGACCCACAGCCAT+GGG 0.534736 1_2:-48792926 Msa0074350:CDS
CAAGGTTGCAGAGAAAGATT+CGG 0.535082 1_2:-48797293 Msa0074350:intron
CCAAAGACAGTAGATGAAGC+AGG 0.535618 1_2:+48795648 None:intergenic
GGTGTTATAGCTAGATTGAT+GGG 0.536964 1_2:-48796974 Msa0074350:CDS
CTAAGGACAACTATTCTCCC+GGG 0.537637 1_2:+48792667 None:intergenic
TTCTGCTAAAATACTTCAAG+CGG 0.538802 1_2:-48796607 Msa0074350:CDS
ATGATTAACGGGCTTCAAGA+TGG 0.541073 1_2:-48792871 Msa0074350:CDS
TACCCTTCATTCTCTTACCA+GGG 0.542493 1_2:+48795823 None:intergenic
TAAGGTTCTTCCTGGATCAT+CGG 0.545547 1_2:-48795253 Msa0074350:CDS
TCAAAGTTCTCCATATTGGT+TGG 0.546294 1_2:+48796509 None:intergenic
GGTCAGATAGGGAGTCAACA+GGG 0.546327 1_2:-48796469 Msa0074350:CDS
AGAAAATTATGCGGAGAACA+AGG 0.550019 1_2:+48796290 None:intergenic
CACCAGCAGGAGCAGCACAT+TGG 0.551873 1_2:-48795862 Msa0074350:CDS
CTAGTGATGTAAATCAAGTA+GGG 0.553151 1_2:-48792636 Msa0074350:three_prime_UTR
CCTCAATCAGCAACTTGCCC+AGG 0.553535 1_2:+48792803 None:intergenic
TAAATTTGCCTGACAGTGCA+AGG 0.555917 1_2:-48796199 Msa0074350:CDS
CCTGGGCAAGTTGCTGATTG+AGG 0.558438 1_2:-48792803 Msa0074350:CDS
AGCAGAGGAACGGCAAATGA+CGG 0.558914 1_2:-48796869 Msa0074350:CDS
ATGGAGAACTGAAGATAGCT+GGG 0.559618 1_2:-48793166 Msa0074350:CDS
TCATCTTCAGATTTGAAGGA+CGG 0.560308 1_2:-48796755 Msa0074350:CDS
GTATCAGCAGCAAGGATGGT+TGG 0.563267 1_2:-48795713 Msa0074350:CDS
TTGTTATTAGGCTGCTGAGA+TGG 0.565145 1_2:+48796938 None:intergenic
AATGATAAGTTTGCTCGCAA+CGG 0.566185 1_2:-48795765 Msa0074350:CDS
GTTCCCTGGTAAGAGAATGA+AGG 0.568397 1_2:-48795826 Msa0074350:CDS
CTAACCATGGTAAATCAGCT+TGG 0.570394 1_2:-48792511 Msa0074350:three_prime_UTR
AGAAGAGATTATCAGAGAGG+TGG 0.574106 1_2:-48795917 Msa0074350:CDS
AATCTACTGACCCACAGCCA+TGG 0.575881 1_2:-48792927 Msa0074350:CDS
AGTTGCTGATTGAGGAGTCT+CGG 0.577954 1_2:-48792795 Msa0074350:CDS
ATCAAGAACAGAGATTGGAC+TGG 0.580851 1_2:+48794350 None:intergenic
GCCTAATAACAAGCAGCACA+AGG 0.581754 1_2:-48796927 Msa0074350:CDS
AGTTCTCATTTAAATTTGGG+TGG 0.584733 1_2:-48797087 Msa0074350:five_prime_UTR
TCTGAGTTGGTTGAACCACT+GGG 0.584863 1_2:-48795735 Msa0074350:CDS
CAAAGGACCTTAAACGGGAG+AGG 0.584910 1_2:-48795569 Msa0074350:CDS
AGAAGATTCACCCAATCTTG+AGG 0.585560 1_2:-48795385 Msa0074350:CDS
GTATCAGCTGGTTCTACTGG+TGG 0.588755 1_2:-48794441 Msa0074350:CDS
TCCCAAAGGTAGAGAGTGGT+AGG 0.589898 1_2:-48796781 Msa0074350:CDS
TTCCCTGGTAAGAGAATGAA+GGG 0.592385 1_2:-48795825 Msa0074350:CDS
TGACCGGAATGTGATTGGAA+AGG 0.595190 1_2:+48796539 None:intergenic
TCAAGAACAGAGATTGGACT+GGG 0.595338 1_2:+48794351 None:intergenic
CTAGTTTCAAGTGACGAAGA+TGG 0.596738 1_2:-48793228 Msa0074350:CDS
TGATCGATATATGGTGCCAA+AGG 0.596759 1_2:-48795586 Msa0074350:CDS
AGGGAACCAAGGAAAGGTAG+AGG 0.597684 1_2:-48792833 Msa0074350:CDS
TTCCAGATGCTAGGGAACCA+AGG 0.597921 1_2:-48792844 Msa0074350:CDS
CAAATGACGGCCGATCGTCT+AGG 0.598475 1_2:-48796856 Msa0074350:CDS
TGATCAGCATCTTTACAGCA+TGG 0.598824 1_2:+48794375 None:intergenic
TCAGCAGCAAGGATGGTTGG+AGG 0.599245 1_2:-48795710 Msa0074350:CDS
GATTTAGTGGCAGAAATAGT+CGG 0.599671 1_2:-48792709 Msa0074350:CDS
CAAAGAAGAGATTATCAGAG+AGG 0.605669 1_2:-48795920 Msa0074350:CDS
TTCAAGTGACGAAGATGGCG+TGG 0.605966 1_2:-48793223 Msa0074350:CDS
CATCACTAGGAAACATCCTA+AGG 0.606274 1_2:+48792650 None:intergenic
GAATCCAAGAGAAGATCCCC+AGG 0.606684 1_2:-48796995 Msa0074350:CDS
GAATCCAAGCTGATTTACCA+TGG 0.607098 1_2:+48792507 None:intergenic
GAAAATCTTGATACGTCGCT+AGG 0.608770 1_2:+48796684 None:intergenic
TCAATCTAGCTATAACACCT+GGG 0.609545 1_2:+48796978 None:intergenic
CAGCAGCAAGGATGGTTGGA+GGG 0.612392 1_2:-48795709 Msa0074350:CDS
CATGTATTAGTAGTTTGTCA+AGG 0.613209 1_2:-48795683 Msa0074350:CDS
TCAAACACAGAAACACTCAC+AGG 0.614246 1_2:+48793051 None:intergenic
AAGGTAGAGGATGATGTCCT+GGG 0.615193 1_2:-48792820 Msa0074350:CDS
AGTGTCAGTGCTGACCTACA+AGG 0.615243 1_2:-48794282 Msa0074350:intron
CTAGCATAGGTCCCTCCACA+TGG 0.618293 1_2:+48793247 None:intergenic
TGAATCATCTGTGAGTAGAG+AGG 0.619779 1_2:-48795943 Msa0074350:CDS
TCGTCACTTGAAACTAGCAT+AGG 0.622726 1_2:+48793234 None:intergenic
TTGAGCTCCTCCTAGACGAT+CGG 0.626010 1_2:+48796846 None:intergenic
AAATTGCAAAGGAAGTAACT+AGG 0.628658 1_2:-48796145 Msa0074350:CDS
GAGATCCCAAAGGTAGAGAG+TGG 0.629561 1_2:-48796785 Msa0074350:CDS
TGACAATTCCTGAATTGATG+CGG 0.632177 1_2:+48792962 None:intergenic
CCTGATTCTAGTTTCTCCGG+TGG 0.633485 1_2:-48797316 Msa0074350:five_prime_UTR
GGAATCTAGAGAAATTGCAA+AGG 0.633666 1_2:-48796156 Msa0074350:CDS
TGAGGCGTTGGACTCTAACA+AGG 0.635888 1_2:-48796633 Msa0074350:CDS
TTTCATCAGAAGCATCGCGA+TGG 0.636867 1_2:-48796431 Msa0074350:CDS
AAATCTTCTAAACAATCGGG+TGG 0.637998 1_2:-48797064 Msa0074350:five_prime_UTR
TAAGGACAACTATTCTCCCG+GGG 0.642645 1_2:+48792668 None:intergenic
GATGCTAGGGAACCAAGGAA+AGG 0.644912 1_2:-48792839 Msa0074350:CDS
GTATCCTTTAAATCTAGGAG+AGG 0.646624 1_2:+48796082 None:intergenic
GGAATCTGAAGACCATGTGG+AGG 0.646710 1_2:-48793259 Msa0074350:CDS
AGTGGTTCAACCAACTCAGA+AGG 0.647689 1_2:+48795738 None:intergenic
ATGACGGCCGATCGTCTAGG+AGG 0.649553 1_2:-48796853 Msa0074350:CDS
ATCGTCTAGGAGGAGCTCAA+GGG 0.651662 1_2:-48796843 Msa0074350:CDS
ACCACTGGGTATCAGCAGCA+AGG 0.651868 1_2:-48795721 Msa0074350:CDS
GATGGCACACAAGTCTCAAG+AGG 0.654613 1_2:-48795892 Msa0074350:CDS
CACAAGTCTCAAGAGGTGCA+AGG 0.655382 1_2:-48795885 Msa0074350:CDS
TCCTTGCTGCTGATACCCAG+TGG 0.657434 1_2:+48795720 None:intergenic
TTCTGGGAATGAATCTCCAG+AGG 0.661179 1_2:-48796033 Msa0074350:CDS
CAAACACAGAAACACTCACA+GGG 0.661315 1_2:+48793052 None:intergenic
GAATCTGAAGACCATGTGGA+GGG 0.661775 1_2:-48793258 Msa0074350:CDS
ACCGGAATGTGATTGGAAAG+GGG 0.664557 1_2:+48796541 None:intergenic
GTCAGATAGGGAGTCAACAG+GGG 0.667063 1_2:-48796468 Msa0074350:CDS
AAGAGTCTTGATCATAGACA+TGG 0.675010 1_2:-48795534 Msa0074350:CDS
ACTTAAATAGACATAGCAGA+CGG 0.675436 1_2:-48795980 Msa0074350:CDS
CAATCTAGCTATAACACCTG+GGG 0.676866 1_2:+48796979 None:intergenic
AAATTACTAGAATCAATGCA+AGG 0.678736 1_2:+48797473 None:intergenic
CAGGTACAGGTGCTTCAGAG+AGG 0.687176 1_2:+48794409 None:intergenic
TTATCCGAAGAAGATTCAGA+AGG 0.687645 1_2:+48795273 None:intergenic
TGCTGATTGAGGAGTCTCGG+TGG 0.702994 1_2:-48792792 Msa0074350:CDS
GTTGGAATCTGAAGACCATG+TGG 0.720815 1_2:-48793262 Msa0074350:CDS
AATATGGGAAAATTTCAGAG+TGG 0.723259 1_2:-48796332 Msa0074350:CDS
TGTTCTGGCAGAAAATTATG+CGG 0.723663 1_2:+48796281 None:intergenic
TGAGGTCTCAGAGATCCCAA+AGG 0.724251 1_2:-48796795 Msa0074350:CDS
AGAGTTCCATGATACACTTG+AGG 0.730462 1_2:-48796651 Msa0074350:CDS
AAGGACAACTATTCTCCCGG+GGG 0.774055 1_2:+48792669 None:intergenic
AAATTGAAGAGAGCTAACCA+TGG 0.776077 1_2:-48792524 Msa0074350:three_prime_UTR
ACAGATGATTCACTAGAACG+CGG 0.780245 1_2:+48795954 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAACAAAAATAACA+CGG + chr1_2:48792931-48792950 None:intergenic 10.0%
!!! AAATTTTATGAGAAATTATT+TGG + chr1_2:48795071-48795090 None:intergenic 10.0%
!! ATTAAGAAATGTATAAATAA+GGG + chr1_2:48795223-48795242 None:intergenic 10.0%
!! TATTAAGAAATGTATAAATA+AGG + chr1_2:48795224-48795243 None:intergenic 10.0%
!! ATAAACATATCAAAATAACA+TGG + chr1_2:48794935-48794954 None:intergenic 15.0%
!! AAAAAATAATCAAAATCTCA+AGG + chr1_2:48795354-48795373 None:intergenic 15.0%
!! AATATTAATAGCAACAAAAT+GGG + chr1_2:48795442-48795461 None:intergenic 15.0%
!! AAATATTAATAGCAACAAAA+TGG + chr1_2:48795443-48795462 None:intergenic 15.0%
!! ATGGTTAAATAATAAATTTG+TGG + chr1_2:48796253-48796272 None:intergenic 15.0%
!!! TGGATAATAATATTTTCATT+TGG - chr1_2:48797507-48797526 Msa0074350:five_prime_UTR 15.0%
!!! TTGTTGTTTAATTCATTTTC+AGG - chr1_2:48792708-48792727 Msa0074350:CDS 20.0%
!!! TGTTGTTTAATTCATTTTCA+GGG - chr1_2:48792709-48792728 Msa0074350:CDS 20.0%
!!! TATAGCTAGAATTTAGAATA+AGG - chr1_2:48792863-48792882 Msa0074350:CDS 20.0%
!!! ATAGCTAGAATTTAGAATAA+GGG - chr1_2:48792864-48792883 Msa0074350:CDS 20.0%
!!! ATTTTGAACTTCATTTAAGT+CGG + chr1_2:48794665-48794684 None:intergenic 20.0%
!! TGAGAAATTATTTGGTTAAT+TGG + chr1_2:48795063-48795082 None:intergenic 20.0%
!! ATGTAAAGTTTCAAAAACAT+TGG - chr1_2:48795381-48795400 Msa0074350:CDS 20.0%
!! AAAATGTATGATTAAGTCTA+AGG + chr1_2:48795490-48795509 None:intergenic 20.0%
!! AATATTTCAAAGTTCTGTTA+AGG - chr1_2:48795583-48795602 Msa0074350:CDS 20.0%
!! ATATTTCAAAGTTCTGTTAA+GGG - chr1_2:48795584-48795603 Msa0074350:CDS 20.0%
!! TGATATTGTTGTAATATTTC+AGG - chr1_2:48795624-48795643 Msa0074350:CDS 20.0%
!! CAATTATGAATCCAAATATA+AGG + chr1_2:48795893-48795912 None:intergenic 20.0%
!! GTAATATTAAACCCTATTTA+TGG - chr1_2:48795995-48796014 Msa0074350:CDS 20.0%
!!! TTTTATTATTGTCAAGAATG+TGG + chr1_2:48796123-48796142 None:intergenic 20.0%
!! TAAAATTACTTCAATTTGCA+TGG - chr1_2:48796138-48796157 Msa0074350:CDS 20.0%
!! TTTATTATTTAACCATAGCA+AGG - chr1_2:48796257-48796276 Msa0074350:CDS 20.0%
!! TTATTATTTAACCATAGCAA+GGG - chr1_2:48796258-48796277 Msa0074350:CDS 20.0%
!!! TATTGAATGAATCTAAAACA+TGG + chr1_2:48796403-48796422 None:intergenic 20.0%
!!! TTAATCATTTTTGATCCAAA+AGG + chr1_2:48797207-48797226 None:intergenic 20.0%
!! TTTGGATCAAAAATGATTAA+CGG - chr1_2:48797207-48797226 Msa0074350:intron 20.0%
!! TTCATCTAAAGATGAATAAA+TGG - chr1_2:48797487-48797506 Msa0074350:five_prime_UTR 20.0%
! AAATTACTAGAATCAATGCA+AGG + chr1_2:48792620-48792639 None:intergenic 25.0%
!!! GTTTTTTCCTTTTTCACTTT+TGG - chr1_2:48792826-48792845 Msa0074350:CDS 25.0%
! TTCATAACCAAAAGTGAAAA+AGG + chr1_2:48792836-48792855 None:intergenic 25.0%
! TTGCAGTTCTCATTTAAATT+TGG - chr1_2:48792999-48793018 Msa0074350:CDS 25.0%
! TGCAGTTCTCATTTAAATTT+GGG - chr1_2:48793000-48793019 Msa0074350:CDS 25.0%
! TCAGCTAATAACTTCTTAAT+TGG + chr1_2:48793056-48793075 None:intergenic 25.0%
! AGAATTTAAGGATGTATTTG+AGG - chr1_2:48793277-48793296 Msa0074350:CDS 25.0%
! TTGAACATGATTTCAATTTG+AGG - chr1_2:48793600-48793619 Msa0074350:intron 25.0%
!! ATTTTCCCATATTAGGTTTT+AGG + chr1_2:48793751-48793770 None:intergenic 25.0%
! CTATGTCTATTTAAGTCAAA+CGG + chr1_2:48794106-48794125 None:intergenic 25.0%
!! TTTTGAACTTCATTTAAGTC+GGG + chr1_2:48794664-48794683 None:intergenic 25.0%
!! AACAACACTTTTATCTCTAA+GGG + chr1_2:48794755-48794774 None:intergenic 25.0%
!! AAACAACACTTTTATCTCTA+AGG + chr1_2:48794756-48794775 None:intergenic 25.0%
! TATCAAATGAAAACACTGTT+GGG - chr1_2:48794794-48794813 Msa0074350:intron 25.0%
! CAGATAAAAGAACTAAGAAT+AGG + chr1_2:48795313-48795332 None:intergenic 25.0%
!! ATTTTGCACAATTGTTTAGA+TGG - chr1_2:48795459-48795478 Msa0074350:CDS 25.0%
! AGAGATGATTAAGTAACTAA+AGG + chr1_2:48795919-48795938 None:intergenic 25.0%
! ATATAGGATGTCCATAAATA+GGG + chr1_2:48796009-48796028 None:intergenic 25.0%
! TATATAGGATGTCCATAAAT+AGG + chr1_2:48796010-48796029 None:intergenic 25.0%
! ATCCTATATATGAAGGTTAA+AGG - chr1_2:48796020-48796039 Msa0074350:CDS 25.0%
! AACCTTTAACCTTCATATAT+AGG + chr1_2:48796025-48796044 None:intergenic 25.0%
!!! TACAGTTTTTTGATCATAGA+CGG - chr1_2:48796045-48796064 Msa0074350:CDS 25.0%
!!! AGATTGATGACGTAATTATT+AGG + chr1_2:48796322-48796341 None:intergenic 25.0%
!! ATTTTGCTTATATTTGTGAC+CGG + chr1_2:48796379-48796398 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - chr1_2:48796414-48796433 Msa0074350:CDS 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG - chr1_2:48796488-48796507 Msa0074350:CDS 25.0%
!! TCAAACCTTTCATCAATTTT+TGG - chr1_2:48796646-48796665 Msa0074350:CDS 25.0%
! AATAACAGTTCATTACAACA+AGG + chr1_2:48796772-48796791 None:intergenic 25.0%
! AATGAACTGTTATTGTTGAT+AGG - chr1_2:48796778-48796797 Msa0074350:CDS 25.0%
! ATGAACTGTTATTGTTGATA+GGG - chr1_2:48796779-48796798 Msa0074350:CDS 25.0%
! TGTTAGAAGGAAATACATTA+TGG - chr1_2:48796905-48796924 Msa0074350:CDS 25.0%
! TGCTCAAACTGATAATAATT+TGG - chr1_2:48796993-48797012 Msa0074350:CDS 25.0%
! CTGATAATAATTTGGAAGTT+TGG - chr1_2:48797001-48797020 Msa0074350:CDS 25.0%
! TTGGATCAAAAATGATTAAC+GGG - chr1_2:48797208-48797227 Msa0074350:intron 25.0%
!! ATTGATAGTAGATGATTTAG+TGG - chr1_2:48797368-48797387 Msa0074350:five_prime_UTR 25.0%
! ATTTGGACAAATAGATTATG+AGG - chr1_2:48797524-48797543 Msa0074350:five_prime_UTR 25.0%
! TTAACCATATTCTTCTAGAT+TGG + chr1_2:48797608-48797627 None:intergenic 25.0%
AGTTCTCATTTAAATTTGGG+TGG - chr1_2:48793003-48793022 Msa0074350:CDS 30.0%
GTGGAAATCTTCTAAACAAT+CGG - chr1_2:48793022-48793041 Msa0074350:CDS 30.0%
TGGAAATCTTCTAAACAATC+GGG - chr1_2:48793023-48793042 Msa0074350:CDS 30.0%
GTATTCATCTTCAGATTTGA+AGG - chr1_2:48793331-48793350 Msa0074350:intron 30.0%
ATTCATTGAACAGAAGTTCA+TGG - chr1_2:48793373-48793392 Msa0074350:intron 30.0%
TTCTGCTAAAATACTTCAAG+CGG - chr1_2:48793483-48793502 Msa0074350:intron 30.0%
!! TGCTTTTTAAACAAAGAGTC+TGG + chr1_2:48793509-48793528 None:intergenic 30.0%
ATGTTCAAAGTTCTCCATAT+TGG + chr1_2:48793588-48793607 None:intergenic 30.0%
! ATTTCAATTTGAGGTCAGAT+AGG - chr1_2:48793609-48793628 Msa0074350:intron 30.0%
! TTTCAATTTGAGGTCAGATA+GGG - chr1_2:48793610-48793629 Msa0074350:intron 30.0%
TGTTGTCCTAAAACCTAATA+TGG - chr1_2:48793742-48793761 Msa0074350:intron 30.0%
GTTGTCCTAAAACCTAATAT+GGG - chr1_2:48793743-48793762 Msa0074350:intron 30.0%
!!! CTCTGAAATTTTCCCATATT+AGG + chr1_2:48793758-48793777 None:intergenic 30.0%
AATATGGGAAAATTTCAGAG+TGG - chr1_2:48793758-48793777 Msa0074350:intron 30.0%
AAATTGCAAAGGAAGTAACT+AGG - chr1_2:48793945-48793964 Msa0074350:intron 30.0%
ATGAAAAACAATCTGAGCAA+TGG - chr1_2:48793971-48793990 Msa0074350:intron 30.0%
! CTAGAGTATCCTTTAAATCT+AGG + chr1_2:48794016-48794035 None:intergenic 30.0%
ACTTAAATAGACATAGCAGA+CGG - chr1_2:48794110-48794129 Msa0074350:intron 30.0%
! CATGTATTAGTAGTTTGTCA+AGG - chr1_2:48794407-48794426 Msa0074350:CDS 30.0%
ACTTCGTAATGATCGATATA+TGG - chr1_2:48794495-48794514 Msa0074350:intron 30.0%
! AATTCTAGAAGCACAATATC+TGG - chr1_2:48794583-48794602 Msa0074350:intron 30.0%
! ACAACACTTTTATCTCTAAG+GGG + chr1_2:48794754-48794773 None:intergenic 30.0%
GTATCAAATGAAAACACTGT+TGG - chr1_2:48794793-48794812 Msa0074350:intron 30.0%
AAAATTCAATGCAAGAGGTT+AGG - chr1_2:48794902-48794921 Msa0074350:intron 30.0%
! TAATTGGCTTATGTGATATG+AGG + chr1_2:48795047-48795066 None:intergenic 30.0%
AAATTGCCAAATCTATGATC+TGG - chr1_2:48795141-48795160 Msa0074350:intron 30.0%
GTGTTGAACTCAATATCTAA+TGG - chr1_2:48795163-48795182 Msa0074350:intron 30.0%
! CTTTTATCTGATCATCATAC+AGG - chr1_2:48795323-48795342 Msa0074350:CDS 30.0%
! ACATTTTGTGAAGTTATCAG+AGG - chr1_2:48795503-48795522 Msa0074350:CDS 30.0%
TTCTCAACGATCAATTATTC+TGG - chr1_2:48795538-48795557 Msa0074350:CDS 30.0%
!! TCATCTTGTTCTGAATGTTT+TGG - chr1_2:48795784-48795803 Msa0074350:CDS 30.0%
ATGAATCCAAATATAAGGTG+AGG + chr1_2:48795888-48795907 None:intergenic 30.0%
TATGGACATCCTATATATGA+AGG - chr1_2:48796013-48796032 Msa0074350:CDS 30.0%
ATGGTATGTAATGTAGAAAG+TGG - chr1_2:48796166-48796185 Msa0074350:CDS 30.0%
ATCAATCTCTTAATGCCTTT+GGG - chr1_2:48796334-48796353 Msa0074350:CDS 30.0%
TTGTTAAGATATACATCCTC+CGG + chr1_2:48796510-48796529 None:intergenic 30.0%
AAGCTCCAAAAATTGATGAA+AGG + chr1_2:48796654-48796673 None:intergenic 30.0%
TGTTTCGTTTAACAGTTGAT+TGG - chr1_2:48796690-48796709 Msa0074350:CDS 30.0%
!!! TGATGTTTGTGCCTTTTTTT+TGG - chr1_2:48796743-48796762 Msa0074350:CDS 30.0%
CAACAAGGAAACCAAAAAAA+AGG + chr1_2:48796757-48796776 None:intergenic 30.0%
!! GTATCTTCTGAAATGTTAGA+AGG - chr1_2:48796892-48796911 Msa0074350:CDS 30.0%
! CATTTTTGATCCAAAAGGTT+TGG + chr1_2:48797202-48797221 None:intergenic 30.0%
AGAGATGACATTGATGTAAT+AGG - chr1_2:48797330-48797349 Msa0074350:five_prime_UTR 30.0%
CTAGTGATGTAAATCAAGTA+GGG - chr1_2:48797454-48797473 Msa0074350:five_prime_UTR 30.0%
GATTCCAATCTAGAAGAATA+TGG - chr1_2:48797601-48797620 Msa0074350:five_prime_UTR 30.0%
TCATAAACAGCAACAACATC+CGG - chr1_2:48792743-48792762 Msa0074350:CDS 35.0%
AAATCTTCTAAACAATCGGG+TGG - chr1_2:48793026-48793045 Msa0074350:CDS 35.0%
TCAATCTAGCTATAACACCT+GGG + chr1_2:48793115-48793134 None:intergenic 35.0%
ATCAATCTAGCTATAACACC+TGG + chr1_2:48793116-48793135 None:intergenic 35.0%
! AGGTGTTATAGCTAGATTGA+TGG - chr1_2:48793115-48793134 Msa0074350:CDS 35.0%
! GGTGTTATAGCTAGATTGAT+GGG - chr1_2:48793116-48793135 Msa0074350:CDS 35.0%
! CTGCTTCGATTTTTCTCTAA+AGG + chr1_2:48793206-48793225 None:intergenic 35.0%
TTAGAGAAAAATCGAAGCAG+AGG - chr1_2:48793206-48793225 Msa0074350:CDS 35.0%
AAGGGATCAGGAAGAATTTA+AGG - chr1_2:48793265-48793284 Msa0074350:CDS 35.0%
TCATCTTCAGATTTGAAGGA+CGG - chr1_2:48793335-48793354 Msa0074350:intron 35.0%
TCATGTAGAACCAACCAATA+TGG - chr1_2:48793571-48793590 Msa0074350:intron 35.0%
TCAAAGTTCTCCATATTGGT+TGG + chr1_2:48793584-48793603 None:intergenic 35.0%
ACAACAATCTTTGACGATCT+TGG + chr1_2:48793728-48793747 None:intergenic 35.0%
AGAAAATTATGCGGAGAACA+AGG + chr1_2:48793803-48793822 None:intergenic 35.0%
TGTTCTGGCAGAAAATTATG+CGG + chr1_2:48793812-48793831 None:intergenic 35.0%
! CATAATTTTCTGCCAGAACA+TGG - chr1_2:48793812-48793831 Msa0074350:intron 35.0%
! GTCTTTTAGGCACAATTCTT+TGG - chr1_2:48793913-48793932 Msa0074350:intron 35.0%
GGAATCTAGAGAAATTGCAA+AGG - chr1_2:48793934-48793953 Msa0074350:intron 35.0%
TCTTCCTCTCCTAGATTTAA+AGG - chr1_2:48794004-48794023 Msa0074350:intron 35.0%
GTATCCTTTAAATCTAGGAG+AGG + chr1_2:48794011-48794030 None:intergenic 35.0%
!! AAAGTTGCTGTTATTTCCTC+TGG + chr1_2:48794076-48794095 None:intergenic 35.0%
AGAGGAAATAACAGCAACTT+TGG - chr1_2:48794075-48794094 Msa0074350:intron 35.0%
GAGGAAATAACAGCAACTTT+GGG - chr1_2:48794076-48794095 Msa0074350:intron 35.0%
CAAAGAAGAGATTATCAGAG+AGG - chr1_2:48794170-48794189 Msa0074350:intron 35.0%
! AATGATAAGTTTGCTCGCAA+CGG - chr1_2:48794325-48794344 Msa0074350:CDS 35.0%
AAGAGTCTTGATCATAGACA+TGG - chr1_2:48794556-48794575 Msa0074350:intron 35.0%
TTATCCGAAGAAGATTCAGA+AGG + chr1_2:48794820-48794839 None:intergenic 35.0%
TTCTGAATCTTCTTCGGATA+AGG - chr1_2:48794819-48794838 Msa0074350:intron 35.0%
CGAAGAAAATTCAATGCAAG+AGG - chr1_2:48794897-48794916 Msa0074350:intron 35.0%
TTTGGCAATTTCATAGCTAG+AGG + chr1_2:48795132-48795151 None:intergenic 35.0%
TCAACACCAGATCATAGATT+TGG + chr1_2:48795150-48795169 None:intergenic 35.0%
AAGCAGACAAAAGACAAGAA+AGG + chr1_2:48795275-48795294 None:intergenic 35.0%
GACAGATCATCTGTAAAAGA+AGG + chr1_2:48795766-48795785 None:intergenic 35.0%
TGTAGACCTCACCTTATATT+TGG - chr1_2:48795879-48795898 Msa0074350:CDS 35.0%
GGAAATTATGAGAAAACACG+TGG + chr1_2:48795943-48795962 None:intergenic 35.0%
TCCATACCATAGACATCAAT+AGG - chr1_2:48795960-48795979 Msa0074350:CDS 35.0%
ACCTATTGATGTCTATGGTA+TGG + chr1_2:48795964-48795983 None:intergenic 35.0%
TAGTCACCTATTGATGTCTA+TGG + chr1_2:48795969-48795988 None:intergenic 35.0%
AAGAATGTGGCAAGCTAAAA+AGG + chr1_2:48796110-48796129 None:intergenic 35.0%
TTCAATTTGCATGGTAGTCA+TGG - chr1_2:48796147-48796166 Msa0074350:CDS 35.0%
CATCAATCTCTTAATGCCTT+TGG - chr1_2:48796333-48796352 Msa0074350:CDS 35.0%
TCAATCTCTTAATGCCTTTG+GGG - chr1_2:48796335-48796354 Msa0074350:CDS 35.0%
TGTATATACTAAGACCCCAA+AGG + chr1_2:48796352-48796371 None:intergenic 35.0%
AGCAACAAATTCATTTGTGC+TGG + chr1_2:48796603-48796622 None:intergenic 35.0%
! TGTTTCTGTGTTTGAAGATC+TGG - chr1_2:48797047-48797066 Msa0074350:five_prime_UTR 35.0%
TGTTTGAAGATCTGGAAGAT+AGG - chr1_2:48797055-48797074 Msa0074350:five_prime_UTR 35.0%
GTGATTTGACTACTTGTTCA+AGG - chr1_2:48797082-48797101 Msa0074350:five_prime_UTR 35.0%
TGACAATTCCTGAATTGATG+CGG + chr1_2:48797131-48797150 None:intergenic 35.0%
GATTTAGTGGCAGAAATAGT+CGG - chr1_2:48797381-48797400 Msa0074350:five_prime_UTR 35.0%
! ATCTAGAAATTTTGTACCCC+CGG - chr1_2:48797405-48797424 Msa0074350:five_prime_UTR 35.0%
CCTACTTGATTTACATCACT+AGG + chr1_2:48797456-48797475 None:intergenic 35.0%
CCTAGTGATGTAAATCAAGT+AGG - chr1_2:48797453-48797472 Msa0074350:five_prime_UTR 35.0%
GAGGATGTGAATAAGTTTAG+TGG - chr1_2:48797543-48797562 Msa0074350:five_prime_UTR 35.0%
AAATTGAAGAGAGCTAACCA+TGG - chr1_2:48797566-48797585 Msa0074350:five_prime_UTR 35.0%
CTAGAATCAGGAGAGAAATC+CGG + chr1_2:48792765-48792784 None:intergenic 40.0%
!! TCTCCTGATTCTAGTTTCTC+CGG - chr1_2:48792771-48792790 Msa0074350:CDS 40.0%
CAAGGTTGCAGAGAAAGATT+CGG - chr1_2:48792797-48792816 Msa0074350:CDS 40.0%
CAATCTAGCTATAACACCTG+GGG + chr1_2:48793114-48793133 None:intergenic 40.0%
! TTGTTATTAGGCTGCTGAGA+TGG + chr1_2:48793155-48793174 None:intergenic 40.0%
!! TCCTTGTGCTGCTTGTTATT+AGG + chr1_2:48793167-48793186 None:intergenic 40.0%
GAAAAATCGAAGCAGAGGAA+CGG - chr1_2:48793211-48793230 Msa0074350:CDS 40.0%
GAAAATCTTGATACGTCGCT+AGG + chr1_2:48793409-48793428 None:intergenic 40.0%
AGAGTTCCATGATACACTTG+AGG - chr1_2:48793439-48793458 Msa0074350:intron 40.0%
!! ATTGGTTGGTTCTACATGAC+CGG + chr1_2:48793570-48793589 None:intergenic 40.0%
TCAGCATGATTTCCATGTTC+TGG + chr1_2:48793827-48793846 None:intergenic 40.0%
TAAATTTGCCTGACAGTGCA+AGG - chr1_2:48793891-48793910 Msa0074350:intron 40.0%
ATAGTTCAAGCAGTGCTTCT+GGG - chr1_2:48794041-48794060 Msa0074350:intron 40.0%
ACAGATGATTCACTAGAACG+CGG + chr1_2:48794139-48794158 None:intergenic 40.0%
TGAATCATCTGTGAGTAGAG+AGG - chr1_2:48794147-48794166 Msa0074350:intron 40.0%
AGAAGAGATTATCAGAGAGG+TGG - chr1_2:48794173-48794192 Msa0074350:intron 40.0%
ATTATCAGAGAGGTGGAAGA+TGG - chr1_2:48794180-48794199 Msa0074350:intron 40.0%
TTCCCTGGTAAGAGAATGAA+GGG - chr1_2:48794265-48794284 Msa0074350:intron 40.0%
TACCCTTCATTCTCTTACCA+GGG + chr1_2:48794270-48794289 None:intergenic 40.0%
! TGATCGATATATGGTGCCAA+AGG - chr1_2:48794504-48794523 Msa0074350:intron 40.0%
TATCTGGTCACAAGAAGTCT+TGG - chr1_2:48794599-48794618 Msa0074350:intron 40.0%
GGGTGAATCTTCTTCAAGAT+TGG + chr1_2:48794698-48794717 None:intergenic 40.0%
AGAAGATTCACCCAATCTTG+AGG - chr1_2:48794705-48794724 Msa0074350:intron 40.0%
! TTTATCTCTAAGGGGCTCAA+AGG + chr1_2:48794746-48794765 None:intergenic 40.0%
TAAGGTTCTTCCTGGATCAT+CGG - chr1_2:48794837-48794856 Msa0074350:intron 40.0%
ATATTTCAGGACGTATCAGC+TGG - chr1_2:48795637-48795656 Msa0074350:CDS 40.0%
TGATCAGCATCTTTACAGCA+TGG + chr1_2:48795718-48795737 None:intergenic 40.0%
TCAAGAACAGAGATTGGACT+GGG + chr1_2:48795742-48795761 None:intergenic 40.0%
ATCAAGAACAGAGATTGGAC+TGG + chr1_2:48795743-48795762 None:intergenic 40.0%
GAAGGATCAAGAACAGAGAT+TGG + chr1_2:48795748-48795767 None:intergenic 40.0%
TACCAGTTTCCTTACCTTGT+AGG + chr1_2:48795825-48795844 None:intergenic 40.0%
! ATAGCAAGGGTGTGTTTCAT+GGG - chr1_2:48796271-48796290 Msa0074350:CDS 40.0%
GTCTTAGTATATACACCCTC+CGG - chr1_2:48796357-48796376 Msa0074350:CDS 40.0%
TGCTTATATTTGTGACCGGA+GGG + chr1_2:48796492-48796511 None:intergenic 40.0%
TTGCTTATATTTGTGACCGG+AGG + chr1_2:48796491-48796510 None:intergenic 40.0%
TTGCTTATATTTGTGACCGG+AGG - chr1_2:48796491-48796510 Msa0074350:CDS 40.0%
! GAAAGGTTTGAAGCAGAAGA+TGG + chr1_2:48796637-48796656 None:intergenic 40.0%
TCGTCACTTGAAACTAGCAT+AGG + chr1_2:48796859-48796878 None:intergenic 40.0%
! CTAGTTTCAAGTGACGAAGA+TGG - chr1_2:48796862-48796881 Msa0074350:CDS 40.0%
TATGGAGAACTGAAGATAGC+TGG - chr1_2:48796923-48796942 Msa0074350:CDS 40.0%
ATGGAGAACTGAAGATAGCT+GGG - chr1_2:48796924-48796943 Msa0074350:CDS 40.0%
CAAACACAGAAACACTCACA+GGG + chr1_2:48797041-48797060 None:intergenic 40.0%
TCAAACACAGAAACACTCAC+AGG + chr1_2:48797042-48797061 None:intergenic 40.0%
CTACTTGTTCAAGGTCTGAA+AGG - chr1_2:48797091-48797110 Msa0074350:intron 40.0%
! AGAAATGCAGCCAAACCTTT+TGG - chr1_2:48797189-48797208 Msa0074350:intron 40.0%
!! ATGATTAACGGGCTTCAAGA+TGG - chr1_2:48797219-48797238 Msa0074350:intron 40.0%
! ATGGTCTTTTCCAGATGCTA+GGG - chr1_2:48797238-48797257 Msa0074350:intron 40.0%
! TCTAGAAATTTTGTACCCCC+GGG - chr1_2:48797406-48797425 Msa0074350:five_prime_UTR 40.0%
CATCACTAGGAAACATCCTA+AGG + chr1_2:48797443-48797462 None:intergenic 40.0%
CTAACCATGGTAAATCAGCT+TGG - chr1_2:48797579-48797598 Msa0074350:five_prime_UTR 40.0%
! GAATCCAAGCTGATTTACCA+TGG + chr1_2:48797586-48797605 None:intergenic 40.0%
CTTCTCTTGGATTCAGTTGC+TGG + chr1_2:48793089-48793108 None:intergenic 45.0%
! GCTAGATTGATGGGTCTTGA+CGG - chr1_2:48793125-48793144 Msa0074350:CDS 45.0%
GCCTAATAACAAGCAGCACA+AGG - chr1_2:48793163-48793182 Msa0074350:CDS 45.0%
ACCTACCACTCTCTACCTTT+GGG + chr1_2:48793313-48793332 None:intergenic 45.0%
TACCTACCACTCTCTACCTT+TGG + chr1_2:48793314-48793333 None:intergenic 45.0%
ACCCCTTTCCAATCACATTC+CGG - chr1_2:48793548-48793567 Msa0074350:intron 45.0%
ACCGGAATGTGATTGGAAAG+GGG + chr1_2:48793552-48793571 None:intergenic 45.0%
GACCGGAATGTGATTGGAAA+GGG + chr1_2:48793553-48793572 None:intergenic 45.0%
TGACCGGAATGTGATTGGAA+AGG + chr1_2:48793554-48793573 None:intergenic 45.0%
CTACATGACCGGAATGTGAT+TGG + chr1_2:48793559-48793578 None:intergenic 45.0%
CAACAGGGGTGAATTACAAC+AGG - chr1_2:48793636-48793655 Msa0074350:intron 45.0%
!! TTTCATCAGAAGCATCGCGA+TGG - chr1_2:48793659-48793678 Msa0074350:intron 45.0%
! AAGCATCGCGATGGTTATCA+TGG - chr1_2:48793668-48793687 Msa0074350:intron 45.0%
! TCGCACGTCTTTTGTCGAAT+TGG + chr1_2:48793694-48793713 None:intergenic 45.0%
CTAAAAGACCTTGCACTGTC+AGG + chr1_2:48793902-48793921 None:intergenic 45.0%
! CTGACAGTGCAAGGTCTTTT+AGG - chr1_2:48793900-48793919 Msa0074350:intron 45.0%
GATAGTTCAAGCAGTGCTTC+TGG - chr1_2:48794040-48794059 Msa0074350:intron 45.0%
! TTCTGGGAATGAATCTCCAG+AGG - chr1_2:48794057-48794076 Msa0074350:intron 45.0%
GTTCCCTGGTAAGAGAATGA+AGG - chr1_2:48794264-48794283 Msa0074350:intron 45.0%
GTACCCTTCATTCTCTTACC+AGG + chr1_2:48794271-48794290 None:intergenic 45.0%
AGTGGTTCAACCAACTCAGA+AGG + chr1_2:48794355-48794374 None:intergenic 45.0%
!! TTCTGAGTTGGTTGAACCAC+TGG - chr1_2:48794354-48794373 Msa0074350:CDS 45.0%
!! TCTGAGTTGGTTGAACCACT+GGG - chr1_2:48794355-48794374 Msa0074350:CDS 45.0%
CCAAAGACAGTAGATGAAGC+AGG + chr1_2:48794445-48794464 None:intergenic 45.0%
CCTGCTTCATCTACTGTCTT+TGG - chr1_2:48794442-48794461 Msa0074350:CDS 45.0%
TCAGCACGCAAGAATGTTCT+AGG + chr1_2:48794472-48794491 None:intergenic 45.0%
! TGGTGCCAAAGGACCTTAAA+CGG - chr1_2:48794515-48794534 Msa0074350:intron 45.0%
TTCACCCAATCTTGAGGTTC+AGG - chr1_2:48794711-48794730 Msa0074350:intron 45.0%
TGGGCCTTCTGAATCTTCTT+CGG - chr1_2:48794813-48794832 Msa0074350:intron 45.0%
TCTTCGGATAAGGTTCTTCC+TGG - chr1_2:48794829-48794848 Msa0074350:intron 45.0%
! TCGGCTCGTGTCTTAGTAAA+AGG - chr1_2:48794856-48794875 Msa0074350:intron 45.0%
TTGCGCAAAACGTGTAGTGA+AGG + chr1_2:48795248-48795267 None:intergenic 45.0%
GACCTACAAGGTAAGGAAAC+TGG - chr1_2:48795820-48795839 Msa0074350:CDS 45.0%
CATGAAACACACCCTTGCTA+TGG + chr1_2:48796272-48796291 None:intergenic 45.0%
! CATAGCAAGGGTGTGTTTCA+TGG - chr1_2:48796270-48796289 Msa0074350:CDS 45.0%
CAGATTCCAACTTCAGCAAC+TGG + chr1_2:48796819-48796838 None:intergenic 45.0%
GTTGGAATCTGAAGACCATG+TGG - chr1_2:48796828-48796847 Msa0074350:CDS 45.0%
GAATCTGAAGACCATGTGGA+GGG - chr1_2:48796832-48796851 Msa0074350:CDS 45.0%
! CTTTTCGACCGCATCAATTC+AGG - chr1_2:48797120-48797139 Msa0074350:intron 45.0%
! GATGGTCTTTTCCAGATGCT+AGG - chr1_2:48797237-48797256 Msa0074350:intron 45.0%
CATCATCCTCTACCTTTCCT+TGG + chr1_2:48797266-48797285 None:intergenic 45.0%
AAAGGTAGAGGATGATGTCC+TGG - chr1_2:48797269-48797288 Msa0074350:intron 45.0%
AAGGTAGAGGATGATGTCCT+GGG - chr1_2:48797270-48797289 Msa0074350:intron 45.0%
! AGTTGCTGATTGAGGAGTCT+CGG - chr1_2:48797295-48797314 Msa0074350:five_prime_UTR 45.0%
TAAGGACAACTATTCTCCCG+GGG + chr1_2:48797425-48797444 None:intergenic 45.0%
CTAAGGACAACTATTCTCCC+GGG + chr1_2:48797426-48797445 None:intergenic 45.0%
CCTAAGGACAACTATTCTCC+CGG + chr1_2:48797427-48797446 None:intergenic 45.0%
CCACCGGAGAAACTAGAATC+AGG + chr1_2:48792777-48792796 None:intergenic 50.0%
!! CCTGATTCTAGTTTCTCCGG+TGG - chr1_2:48792774-48792793 Msa0074350:CDS 50.0%
!! TTCTAGTTTCTCCGGTGGCA+AGG - chr1_2:48792779-48792798 Msa0074350:CDS 50.0%
TTTCTCTGCAACCTTGCCAC+CGG + chr1_2:48792793-48792812 None:intergenic 50.0%
GAATCCAAGAGAAGATCCCC+AGG - chr1_2:48793095-48793114 Msa0074350:CDS 50.0%
AACACCTGGGGATCTTCTCT+TGG + chr1_2:48793102-48793121 None:intergenic 50.0%
AGCAGAGGAACGGCAAATGA+CGG - chr1_2:48793221-48793240 Msa0074350:CDS 50.0%
TTGAGCTCCTCCTAGACGAT+CGG + chr1_2:48793247-48793266 None:intergenic 50.0%
ATCGTCTAGGAGGAGCTCAA+GGG - chr1_2:48793247-48793266 Msa0074350:CDS 50.0%
TGAGGTCTCAGAGATCCCAA+AGG - chr1_2:48793295-48793314 Msa0074350:intron 50.0%
GAGATCCCAAAGGTAGAGAG+TGG - chr1_2:48793305-48793324 Msa0074350:intron 50.0%
TCCCAAAGGTAGAGAGTGGT+AGG - chr1_2:48793309-48793328 Msa0074350:intron 50.0%
TTGATACGTCGCTAGGCGTT+TGG + chr1_2:48793402-48793421 None:intergenic 50.0%
CCAACGCCTCAAGTGTATCA+TGG + chr1_2:48793448-48793467 None:intergenic 50.0%
CCATGATACACTTGAGGCGT+TGG - chr1_2:48793445-48793464 Msa0074350:intron 50.0%
!! TGAGGCGTTGGACTCTAACA+AGG - chr1_2:48793457-48793476 Msa0074350:intron 50.0%
AGGTCAGATAGGGAGTCAAC+AGG - chr1_2:48793620-48793639 Msa0074350:intron 50.0%
GGTCAGATAGGGAGTCAACA+GGG - chr1_2:48793621-48793640 Msa0074350:intron 50.0%
GTCAGATAGGGAGTCAACAG+GGG - chr1_2:48793622-48793641 Msa0074350:intron 50.0%
GATGGCACACAAGTCTCAAG+AGG - chr1_2:48794198-48794217 Msa0074350:intron 50.0%
! CACAAGTCTCAAGAGGTGCA+AGG - chr1_2:48794205-48794224 Msa0074350:intron 50.0%
TCATTGAAACCTTCCCCGCT+AGG + chr1_2:48794310-48794329 None:intergenic 50.0%
GTATCAGCAGCAAGGATGGT+TGG - chr1_2:48794377-48794396 Msa0074350:CDS 50.0%
GGTGCCAAAGGACCTTAAAC+GGG - chr1_2:48794516-48794535 Msa0074350:intron 50.0%
! CTCTCCCGTTTAAGGTCCTT+TGG + chr1_2:48794523-48794542 None:intergenic 50.0%
CAAAGGACCTTAAACGGGAG+AGG - chr1_2:48794521-48794540 Msa0074350:intron 50.0%
CTCTTCTCCTCTCCCGTTTA+AGG + chr1_2:48794531-48794550 None:intergenic 50.0%
GTCTGTGCATTCACTGAAGC+AGG - chr1_2:48794621-48794640 Msa0074350:intron 50.0%
GGAGCCTGAACCTCAAGATT+GGG + chr1_2:48794718-48794737 None:intergenic 50.0%
AGGAGCCTGAACCTCAAGAT+TGG + chr1_2:48794719-48794738 None:intergenic 50.0%
CTAAGGGGCTCAAAGGTTTC+AGG + chr1_2:48794739-48794758 None:intergenic 50.0%
!! GACGTATCAGCTGGTTCTAC+TGG - chr1_2:48795646-48795665 Msa0074350:CDS 50.0%
!! GTATCAGCTGGTTCTACTGG+TGG - chr1_2:48795649-48795668 Msa0074350:CDS 50.0%
GGAGATTCATGTCCAGGTAC+AGG + chr1_2:48795697-48795716 None:intergenic 50.0%
CAGCATGGAGATTCATGTCC+AGG + chr1_2:48795703-48795722 None:intergenic 50.0%
!! AGTGTCAGTGCTGACCTACA+AGG - chr1_2:48795808-48795827 Msa0074350:CDS 50.0%
!! CAGTGCTGACCTACAAGGTA+AGG - chr1_2:48795813-48795832 Msa0074350:CDS 50.0%
GCAACTCCAGTTGCTGAAGT+TGG - chr1_2:48796810-48796829 Msa0074350:CDS 50.0%
GGAATCTGAAGACCATGTGG+AGG - chr1_2:48796831-48796850 Msa0074350:CDS 50.0%
TTCAAGTGACGAAGATGGCG+TGG - chr1_2:48796867-48796886 Msa0074350:CDS 50.0%
AATCTACTGACCCACAGCCA+TGG - chr1_2:48797163-48797182 Msa0074350:intron 50.0%
ATCTACTGACCCACAGCCAT+GGG - chr1_2:48797164-48797183 Msa0074350:intron 50.0%
CATTTCTCACCCATGGCTGT+GGG + chr1_2:48797176-48797195 None:intergenic 50.0%
TTGGCTGCATTTCTCACCCA+TGG + chr1_2:48797183-48797202 None:intergenic 50.0%
TTCCAGATGCTAGGGAACCA+AGG - chr1_2:48797246-48797265 Msa0074350:intron 50.0%
TTCCTTGGTTCCCTAGCATC+TGG + chr1_2:48797251-48797270 None:intergenic 50.0%
GATGCTAGGGAACCAAGGAA+AGG - chr1_2:48797251-48797270 Msa0074350:intron 50.0%
AGGGAACCAAGGAAAGGTAG+AGG - chr1_2:48797257-48797276 Msa0074350:intron 50.0%
AAGGACAACTATTCTCCCGG+GGG + chr1_2:48797424-48797443 None:intergenic 50.0%
CCGGGAGAATAGTTGTCCTT+AGG - chr1_2:48797424-48797443 Msa0074350:five_prime_UTR 50.0%
CAAATGACGGCCGATCGTCT+AGG - chr1_2:48793234-48793253 Msa0074350:CDS 55.0%
GATCGTCTAGGAGGAGCTCA+AGG - chr1_2:48793246-48793265 Msa0074350:CDS 55.0%
TAGGAGGAGCTCAAGGGATC+AGG - chr1_2:48793253-48793272 Msa0074350:CDS 55.0%
GCTGATATGCTAGCGTTCCC+TGG - chr1_2:48794250-48794269 Msa0074350:intron 55.0%
GCTAGGCAGGCTGTCAAAAC+GGG + chr1_2:48794293-48794312 None:intergenic 55.0%
CGCTAGGCAGGCTGTCAAAA+CGG + chr1_2:48794294-48794313 None:intergenic 55.0%
!! CGTTTTGACAGCCTGCCTAG+CGG - chr1_2:48794292-48794311 Msa0074350:CDS 55.0%
!! GTTTTGACAGCCTGCCTAGC+GGG - chr1_2:48794293-48794312 Msa0074350:CDS 55.0%
! TTTTGACAGCCTGCCTAGCG+GGG - chr1_2:48794294-48794313 Msa0074350:CDS 55.0%
CAACGGCGAACCTTCTGAGT+TGG - chr1_2:48794342-48794361 Msa0074350:CDS 55.0%
ACCACTGGGTATCAGCAGCA+AGG - chr1_2:48794369-48794388 Msa0074350:CDS 55.0%
TCCTTGCTGCTGATACCCAG+TGG + chr1_2:48794373-48794392 None:intergenic 55.0%
CTGGGTATCAGCAGCAAGGA+TGG - chr1_2:48794373-48794392 Msa0074350:CDS 55.0%
TCAGCAGCAAGGATGGTTGG+AGG - chr1_2:48794380-48794399 Msa0074350:CDS 55.0%
CAGCAGCAAGGATGGTTGGA+GGG - chr1_2:48794381-48794400 Msa0074350:CDS 55.0%
AAGACACGAGCCGATGATCC+AGG + chr1_2:48794850-48794869 None:intergenic 55.0%
CAGGTACAGGTGCTTCAGAG+AGG + chr1_2:48795684-48795703 None:intergenic 55.0%
!! CTCTCTGAAGCACCTGTACC+TGG - chr1_2:48795682-48795701 Msa0074350:CDS 55.0%
CTAGCATAGGTCCCTCCACA+TGG + chr1_2:48796846-48796865 None:intergenic 55.0%
GCATTTCTCACCCATGGCTG+TGG + chr1_2:48797177-48797196 None:intergenic 55.0%
CCTCAATCAGCAACTTGCCC+AGG + chr1_2:48797290-48797309 None:intergenic 55.0%
! CCTGGGCAAGTTGCTGATTG+AGG - chr1_2:48797287-48797306 Msa0074350:intron 55.0%
! TGCTGATTGAGGAGTCTCGG+TGG - chr1_2:48797298-48797317 Msa0074350:five_prime_UTR 55.0%
ATGACGGCCGATCGTCTAGG+AGG - chr1_2:48793237-48793256 Msa0074350:CDS 60.0%
! AAGAGGTGCAAGGCACCAGC+AGG - chr1_2:48794215-48794234 Msa0074350:intron 60.0%
CACCAGCAGGAGCAGCACAT+TGG - chr1_2:48794228-48794247 Msa0074350:intron 60.0%
! AGCCAATGTGCTGCTCCTGC+TGG + chr1_2:48794233-48794252 None:intergenic 60.0%
TGAAACCTTCCCCGCTAGGC+AGG + chr1_2:48794306-48794325 None:intergenic 60.0%
GACAGCCTGCCTAGCGGGGA+AGG - chr1_2:48794298-48794317 Msa0074350:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 48792472 48797640 48792472 ID=Msa0074350;Name=Msa0074350
chr1_2 mRNA 48792472 48797640 48792472 ID=Msa0074350-mRNA-1;Parent=Msa0074350;Name=Msa0074350-mRNA-1;_AED=0.06;_eAED=0.06;_QI=422|1|1|1|1|1|4|230|877
chr1_2 exon 48792472 48793312 48792472 ID=Msa0074350-mRNA-1:exon:14935;Parent=Msa0074350-mRNA-1
chr1_2 exon 48794283 48794466 48794283 ID=Msa0074350-mRNA-1:exon:14934;Parent=Msa0074350-mRNA-1
chr1_2 exon 48795194 48797107 48795194 ID=Msa0074350-mRNA-1:exon:14933;Parent=Msa0074350-mRNA-1
chr1_2 exon 48797294 48797640 48797294 ID=Msa0074350-mRNA-1:exon:14932;Parent=Msa0074350-mRNA-1
chr1_2 five_prime_UTR 48797294 48797640 48797294 ID=Msa0074350-mRNA-1:five_prime_utr;Parent=Msa0074350-mRNA-1
chr1_2 five_prime_UTR 48797033 48797107 48797033 ID=Msa0074350-mRNA-1:five_prime_utr;Parent=Msa0074350-mRNA-1
chr1_2 CDS 48795194 48797032 48795194 ID=Msa0074350-mRNA-1:cds;Parent=Msa0074350-mRNA-1
chr1_2 CDS 48794283 48794466 48794283 ID=Msa0074350-mRNA-1:cds;Parent=Msa0074350-mRNA-1
chr1_2 CDS 48792702 48793312 48792702 ID=Msa0074350-mRNA-1:cds;Parent=Msa0074350-mRNA-1
chr1_2 three_prime_UTR 48792472 48792701 48792472 ID=Msa0074350-mRNA-1:three_prime_utr;Parent=Msa0074350-mRNA-1
Gene Sequence

>Msa0074350

ATGTCACCAGCAACTGAATCCAAGAGAAGATCCCCAGGTGTTATAGCTAGATTGATGGGTCTTGACGGTCTTCCATCTCAGCAGCCTAATAACAAGCAGCACAAGGATCTACAGAAATCAACACCTTTAGAGAAAAATCGAAGCAGAGGAACGGCAAATGACGGCCGATCGTCTAGGAGGAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCAAAGGTAGAGAGTGGTAGGTATTCATCTTCAGATTTGAAGGACGGTGAAGATGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTAGCGACGTATCAAGATTTTCAGTCTTCACAAGAGTTCCATGATACACTTGAGGCGTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTCAAGCGGCCAGACTCTTTGTTTAAAAAGCATTTGAATGATCTGCAAGCTACCCCTTTCCAATCACATTCCGGTCATGTAGAACCAACCAATATGGAGAACTTTGAACATGATTTCAATTTGAGGTCAGATAGGGAGTCAACAGGGGTGAATTACAACAGGTTTCATCAGAAGCATCGCGATGGTTATCATGGCCAATTCGACAAAAGACGTGCGATGCATAATTCACCAAGATCGTCAAAGATTGTTGTCCTAAAACCTAATATGGGAAAATTTCAGAGTGGTACTAGAATTGAATCATCACCTTGTTCTCCGCATAATTTTCTGCCAGAACATGGAAATCATGCTGAATTTTCAGATGTCAGATTTAGAGATACTGAACTGTATCAAAAAATAAATTTGCCTGACAGTGCAAGGTCTTTTAGGCACAATTCTTTGGAATCTAGAGAAATTGCAAAGGAAGTAACTAGGCAAATGAAAAACAATCTGAGCAATGGTTGCATGATGTCTTCCTCTCCTAGATTTAAAGGATACTCTAGACATGATAGTTCAAGCAGTGCTTCTGGGAATGAATCTCCAGAGGAAATAACAGCAACTTTGGGTAAGCCGTTTGACTTAAATAGACATAGCAGACGGTCACCGCGTTCTAGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAGTCTCAAGAGGTGCAAGGCACCAGCAGGAGCAGCACATTGGCTGATATGCTAGCGTTCCCTGGTAAGAGAATGAAGGGTACCCGTTTTGACAGCCTGCCTAGCGGGGAAGGTTTCAATGATAAGTTTGCTCGCAACGGCGAACCTTCTGAGTTGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCATGTATTAGTAGTTTGTCAAGGTCAAGATCTCTTCCTGCTTCATCTACTGTCTTTGGAAGTCCTAGAACATTCTTGCGTGCTGAAGCACTTCGTAATGATCGATATATGGTGCCAAAGGACCTTAAACGGGAGAGGAGAAGAGCGACAAAGAGTCTTGATCATAGACATGGTATGAATTCTAGAAGCACAATATCTGGTCACAAGAAGTCTTGGTCTGTGCATTCACTGAAGCAGGAAGTTAATGAGTTCTCTCCCGACTTAAATGAAGTTCAAAATAACATGAAGACCAATCTTGAAGAAGATTCACCCAATCTTGAGGTTCAGGCTCCTGAAACCTTTGAGCCCCTTAGAGATAAAAGTGTTGTTTGTGATGATGTTGCAGATGTATCAAATGAAAACACTGTTGGGCCTTCTGAATCTTCTTCGGATAAGGTTCTTCCTGGATCATCGGCTCGTGTCTTAGTAAAAGGCGACAGTAGTGTTGTTGACGAAGAAAATTCAATGCAAGAGGACGTATCAGCTGGTTCTACTGGTGGATTTTCAGTCCTCTCTGAAGCACCTGTACCTGGACATGAATCTCCATGCTGTAAAGATGCTGATCAACCCAGTCCAATCTCTGTTCTTGATCCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGGAAGTGTCAGTGCTGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGACCATGTGGAGGGACCTATGCTAGTTTCAAGTGACGAAGATGGCGTGGAAGTATCTTCTGAAATGTTAGAAGGAAATACATTATGGAGAACTGAAGATAGCTGGGAGTCTTCTTACATTATTGATGTTTTGTCTGAATCTGCTATTGCTGATGCTCAAACTGATAATAATTTGGAAGTTTGGCAATCTCTAGAATGCCCTGTGAGTGTTTCTGTGTTTGAAGATCTGGAAGATAGGTACAGTGATTTGACTACTTGTTCAAGGTCTGAAAGGAGATTGCTTTTCGACCGCATCAATTCAGGAATTGTCAAGATTCACGAGCAATCTACTGACCCACAGCCATGGGTGAGAAATGCAGCCAAACCTTTTGGATCAAAAATGATTAACGGGCTTCAAGATGGTCTTTTCCAGATGCTAGGGAACCAAGGAAAGGTAGAGGATGATGTCCTGGGCAAGTTGCTGATTGAGGAGTCTCGGTGGTTGAAGTTGAGAGATGACATTGATGTAATAGGTAGAGAAGTTGAGAGATTGATAGTAGATGATTTAGTGGCAGAAATAGTCGGTATCTAG
Protein sequence

>Msa0074350

MSPATESKRRSPGVIARLMGLDGLPSQQPNNKQHKDLQKSTPLEKNRSRGTANDGRSSRRSSRDQEEFKDVFEVSEIPKVESGRYSSSDLKDGEDEMSFIEQKFMDAKRLATYQDFQSSQEFHDTLEALDSNKDLLLKYFKRPDSLFKKHLNDLQATPFQSHSGHVEPTNMENFEHDFNLRSDRESTGVNYNRFHQKHRDGYHGQFDKRRAMHNSPRSSKIVVLKPNMGKFQSGTRIESSPCSPHNFLPEHGNHAEFSDVRFRDTELYQKINLPDSARSFRHNSLESREIAKEVTRQMKNNLSNGCMMSSSPRFKGYSRHDSSSSASGNESPEEITATLGKPFDLNRHSRRSPRSSESSVSREAKKRLSERWKMAHKSQEVQGTSRSSTLADMLAFPGKRMKGTRFDSLPSGEGFNDKFARNGEPSELVEPLGISSKDGWRDACISSLSRSRSLPASSTVFGSPRTFLRAEALRNDRYMVPKDLKRERRRATKSLDHRHGMNSRSTISGHKKSWSVHSLKQEVNEFSPDLNEVQNNMKTNLEEDSPNLEVQAPETFEPLRDKSVVCDDVADVSNENTVGPSESSSDKVLPGSSARVLVKGDSSVVDEENSMQEDVSAGSTGGFSVLSEAPVPGHESPCCKDADQPSPISVLDPSFTDDLSSCSECFGSVSADLQGLRMQLQLLKLESEDHVEGPMLVSSDEDGVEVSSEMLEGNTLWRTEDSWESSYIIDVLSESAIADAQTDNNLEVWQSLECPVSVSVFEDLEDRYSDLTTCSRSERRLLFDRINSGIVKIHEQSTDPQPWVRNAAKPFGSKMINGLQDGLFQMLGNQGKVEDDVLGKLLIEESRWLKLRDDIDVIGREVERLIVDDLVAEIVGI*