Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202370 | XP_003595198.3 | 95.926 | 270 | 11 | 0 | 67 | 336 | 1 | 270 | 0.0 | 542 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202370 | A2Q1D0 | 95.926 | 270 | 11 | 0 | 67 | 336 | 1 | 270 | 0.0 | 542 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0101020 | Msa0202370 | 0.802218 | 6.225572e-49 | -8.615850e-47 |
| Msa0111080 | Msa0202370 | 0.816450 | 5.494832e-52 | -8.615850e-47 |
| Msa0142500 | Msa0202370 | 0.805837 | 1.100719e-49 | -8.615850e-47 |
| Msa0154920 | Msa0202370 | 0.814652 | 1.381126e-51 | -8.615850e-47 |
| Msa0178510 | Msa0202370 | 0.807462 | 4.994906e-50 | -8.615850e-47 |
| Msa0202340 | Msa0202370 | 0.808764 | 2.637699e-50 | -8.615850e-47 |
| Msa0202370 | Msa0202410 | 0.802877 | 4.554622e-49 | -8.615850e-47 |
| Msa0202370 | Msa0340690 | 0.816004 | 6.914538e-52 | -8.615850e-47 |
| Msa0202370 | Msa0340710 | 0.809147 | 2.184608e-50 | -8.615850e-47 |
| Msa0202370 | Msa0453070 | 0.806979 | 6.323522e-50 | -8.615850e-47 |
| Msa0202370 | Msa0491000 | 0.807012 | 6.222289e-50 | -8.615850e-47 |
| Msa0202370 | Msa0532930 | 0.803574 | 3.266656e-49 | -8.615850e-47 |
| Msa0202370 | Msa0619920 | 0.810357 | 1.199905e-50 | -8.615850e-47 |
| Msa0202370 | Msa0667740 | 0.804106 | 2.532462e-49 | -8.615850e-47 |
| Msa0202370 | Msa0749440 | 0.823660 | 1.229226e-53 | -8.615850e-47 |
| Msa0202370 | Msa0750850 | 0.816625 | 5.022074e-52 | -8.615850e-47 |
| Msa0202370 | Msa0751850 | 0.819732 | 9.951113e-53 | -8.615850e-47 |
| Msa0202370 | Msa0763920 | 0.801462 | 8.902336e-49 | -8.615850e-47 |
| Msa0202370 | Msa0861470 | 0.815737 | 7.931514e-52 | -8.615850e-47 |
| Msa0202370 | Msa0861570 | 0.815482 | 9.037051e-52 | -8.615850e-47 |
| Msa0202370 | Msa0901320 | 0.827449 | 1.554792e-54 | -8.615850e-47 |
| Msa0202370 | Msa1034280 | 0.801067 | 1.072577e-48 | -8.615850e-47 |
| Msa0202370 | Msa1071320 | 0.812850 | 3.444237e-51 | -8.615850e-47 |
| Msa0202370 | Msa1177780 | 0.812572 | 3.963182e-51 | -8.615850e-47 |
| Msa0202370 | Msa1250110 | 0.810295 | 1.237492e-50 | -8.615850e-47 |
| Msa0202370 | Msa1250730 | 0.801313 | 9.549613e-49 | -8.615850e-47 |
| Msa0202370 | Msa1270660 | 0.807370 | 5.225951e-50 | -8.615850e-47 |
| Msa0202370 | Msa1270730 | 0.803279 | 3.760056e-49 | -8.615850e-47 |
| Msa0202370 | Msa1355890 | 0.801977 | 6.979540e-49 | -8.615850e-47 |
| Msa0202370 | Msa1371940 | 0.821225 | 4.522220e-53 | -8.615850e-47 |
| Msa0202370 | Msa1372150 | 0.801243 | 9.872100e-49 | -8.615850e-47 |
| Msa0202370 | Msa1396940 | 0.800902 | 1.158839e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202370 | MtrunA17_Chr2g0299461 | 80.126 | 317 | 11 | 1 | 72 | 336 | 1 | 317 | 0.0 | 509 |
| Msa0202370 | MtrunA17_Chr2g0299421 | 81.749 | 263 | 46 | 1 | 76 | 336 | 11 | 273 | 2.47e-162 | 454 |
| Msa0202370 | MtrunA17_Chr2g0299401 | 76.046 | 263 | 61 | 1 | 76 | 336 | 7 | 269 | 2.34e-147 | 416 |
| Msa0202370 | MtrunA17_Chr2g0299391 | 70.833 | 264 | 77 | 0 | 69 | 332 | 5 | 268 | 2.16e-135 | 387 |
| Msa0202370 | MtrunA17_Chr4g0071071 | 68.116 | 276 | 86 | 2 | 59 | 334 | 76 | 349 | 7.92e-135 | 387 |
| Msa0202370 | MtrunA17_Chr4g0071091 | 63.740 | 262 | 94 | 1 | 67 | 328 | 1 | 261 | 5.85e-128 | 366 |
| Msa0202370 | MtrunA17_Chr1g0151361 | 58.594 | 256 | 105 | 1 | 79 | 334 | 8 | 262 | 1.51e-106 | 313 |
| Msa0202370 | MtrunA17_Chr1g0151381 | 42.105 | 152 | 67 | 2 | 184 | 334 | 5 | 136 | 1.89e-26 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202370 | AT3G47590.1 | 64.479 | 259 | 89 | 2 | 73 | 331 | 53 | 308 | 2.08e-121 | 352 |
| Msa0202370 | AT1G29840.1 | 61.509 | 265 | 99 | 2 | 67 | 331 | 50 | 311 | 2.23e-118 | 344 |
| Msa0202370 | AT3G47560.1 | 62.548 | 259 | 91 | 3 | 67 | 325 | 1 | 253 | 5.44e-116 | 336 |
| Msa0202370 | AT3G47560.4 | 62.548 | 259 | 91 | 3 | 67 | 325 | 37 | 289 | 3.05e-115 | 336 |
| Msa0202370 | AT5G11910.4 | 55.034 | 298 | 126 | 4 | 35 | 332 | 1 | 290 | 7.84e-114 | 333 |
| Msa0202370 | AT5G11910.1 | 58.123 | 277 | 110 | 3 | 56 | 332 | 2 | 272 | 1.03e-113 | 332 |
| Msa0202370 | AT3G47560.3 | 57.244 | 283 | 93 | 3 | 67 | 325 | 1 | 279 | 4.56e-112 | 327 |
| Msa0202370 | AT3G47560.5 | 56.643 | 286 | 91 | 4 | 67 | 325 | 1 | 280 | 2.03e-109 | 321 |
| Msa0202370 | AT3G47560.2 | 52.258 | 310 | 93 | 4 | 67 | 325 | 1 | 306 | 9.76e-106 | 312 |
| Msa0202370 | AT2G19550.1 | 56.693 | 254 | 100 | 6 | 80 | 328 | 5 | 253 | 1.61e-98 | 295 |
| Msa0202370 | AT3G47590.2 | 65.432 | 162 | 55 | 1 | 73 | 234 | 53 | 213 | 3.34e-74 | 229 |
| Msa0202370 | AT5G11910.3 | 52.717 | 184 | 81 | 3 | 35 | 218 | 1 | 178 | 1.47e-60 | 192 |
| Msa0202370 | AT5G11910.2 | 57.669 | 163 | 65 | 2 | 56 | 218 | 2 | 160 | 3.19e-60 | 191 |
Find 79 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCCTTGGTAAAGATTATT+TGG | 0.161587 | 2_1:-24716626 | Msa0202370:CDS |
| CCAAGCGACATTACTGATTA+TGG | 0.170939 | 2_1:-24715869 | Msa0202370:three_prime_UTR |
| TAGCTAACAGTGCCCTTATT+AGG | 0.209418 | 2_1:+24715945 | None:intergenic |
| TCCGGATGAAGATATTAAAT+AGG | 0.261189 | 2_1:-24715811 | Msa0202370:three_prime_UTR |
| GGAAACCATTGACCCTAATA+AGG | 0.268376 | 2_1:-24715958 | Msa0202370:CDS |
| TGTTACTAAGGAAAGTTTAA+TGG | 0.281740 | 2_1:-24716324 | Msa0202370:CDS |
| ATCTACTGTTGCAGGAAGTT+TGG | 0.288030 | 2_1:-24716354 | Msa0202370:intron |
| TTGGAAAACAAGAATATTAT+AGG | 0.296917 | 2_1:+24715888 | None:intergenic |
| CGTTCCAGTATGGTAACTAT+TGG | 0.315195 | 2_1:-24717416 | Msa0202370:CDS |
| GTTCCAGTATGGTAACTATT+GGG | 0.346161 | 2_1:-24717415 | Msa0202370:CDS |
| CGTGTAATCCGTGCAATTGT+TGG | 0.348094 | 2_1:-24717342 | Msa0202370:CDS |
| ATGATATGCAACTTGTGATT+TGG | 0.362877 | 2_1:+24716050 | None:intergenic |
| CCGGATGAAGATATTAAATA+GGG | 0.372166 | 2_1:-24715810 | Msa0202370:three_prime_UTR |
| ATAGACACTCTCACACTCTA+AGG | 0.374588 | 2_1:-24719622 | Msa0202370:CDS |
| TTGAGCACTGTCGATCGATT+AGG | 0.383850 | 2_1:+24719941 | None:intergenic |
| AGCTAACAGTGCCCTTATTA+GGG | 0.391314 | 2_1:+24715946 | None:intergenic |
| ATGACTACTGTATGCATGAT+TGG | 0.408416 | 2_1:+24716019 | None:intergenic |
| AGTGCCCTTATTAGGGTCAA+TGG | 0.409356 | 2_1:+24715953 | None:intergenic |
| CGGAATTGATTGAATGAAAA+CGG | 0.417100 | 2_1:+24719978 | None:intergenic |
| AACTCGTGCGCACTTTGAAC+TGG | 0.420535 | 2_1:+24716086 | None:intergenic |
| CCCTATTTAATATCTTCATC+CGG | 0.420718 | 2_1:+24715810 | None:intergenic |
| GGTGAACCTTGTTGCTGCAT+TGG | 0.443818 | 2_1:-24719231 | Msa0202370:CDS |
| ATTGATGTGAAGACGAAGTC+AGG | 0.444727 | 2_1:-24716580 | Msa0202370:intron |
| AGCGAAGGTTCGTTCCAGTA+TGG | 0.446124 | 2_1:-24717426 | Msa0202370:CDS |
| CAACTCGGATCGAAGGAATT+CGG | 0.450533 | 2_1:+24720005 | None:intergenic |
| TTTGGATTACCGTGTTACTA+AGG | 0.456099 | 2_1:-24716336 | Msa0202370:CDS |
| TTAGCTAGGTCTGTCTTGCT+TGG | 0.458979 | 2_1:-24715929 | Msa0202370:exon |
| AAAACTGTTGTCAACCTCTC+TGG | 0.459812 | 2_1:-24716679 | Msa0202370:CDS |
| CTTCATCATGGTAAATAATC+CGG | 0.460420 | 2_1:-24715829 | Msa0202370:three_prime_UTR |
| CGGATTATTTACCATGATGA+AGG | 0.460648 | 2_1:+24715830 | None:intergenic |
| TGCATTCTTTGTCAATCTGC+AGG | 0.462188 | 2_1:+24716270 | None:intergenic |
| AACAAGGTTCACCATGAGAT+TGG | 0.463722 | 2_1:+24719241 | None:intergenic |
| GGATTACACGATTTGATTCA+CGG | 0.464996 | 2_1:+24717355 | None:intergenic |
| GGCAGGGTCCTTACAGTTCA+CGG | 0.470147 | 2_1:-24716128 | Msa0202370:intron |
| GAACACTATCTCAAATTCAA+TGG | 0.470167 | 2_1:-24719600 | Msa0202370:CDS |
| GGAATTGATTGAATGAAAAC+GGG | 0.478278 | 2_1:+24719979 | None:intergenic |
| CTCCCCAATAGTTACCATAC+TGG | 0.479957 | 2_1:+24717412 | None:intergenic |
| TTGGAAAGAATTACGAATGA+GGG | 0.484481 | 2_1:-24716607 | Msa0202370:CDS |
| CCTTGTTGCTGCATTGGAAA+AGG | 0.484553 | 2_1:-24719225 | Msa0202370:CDS |
| AAGAATATTATAGGAAAATG+AGG | 0.485317 | 2_1:+24715897 | None:intergenic |
| CCATAATCAGTAATGTCGCT+TGG | 0.498755 | 2_1:+24715869 | None:intergenic |
| ACATAAGATAACAATTTCGT+TGG | 0.500195 | 2_1:+24719389 | None:intergenic |
| GGAAAGTTTAATGGATCGCA+TGG | 0.504200 | 2_1:-24716315 | Msa0202370:CDS |
| GAAACCATTGACCCTAATAA+GGG | 0.504416 | 2_1:-24715957 | Msa0202370:CDS |
| TACTATGTCCAACAATTGCA+CGG | 0.505039 | 2_1:+24717334 | None:intergenic |
| TAATAAGGGCACTGTTAGCT+AGG | 0.506345 | 2_1:-24715943 | Msa0202370:exon |
| TGGTAACTATTGGGGAGAGA+TGG | 0.507786 | 2_1:-24717406 | Msa0202370:CDS |
| GAAATTGTTATCTTATGTCA+TGG | 0.515089 | 2_1:-24719384 | Msa0202370:CDS |
| TTTGGAAAGAATTACGAATG+AGG | 0.521449 | 2_1:-24716608 | Msa0202370:CDS |
| TAATTCAAACACCTTCATCA+TGG | 0.522005 | 2_1:-24715841 | Msa0202370:three_prime_UTR |
| CGGGAAACAACTCGGATCGA+AGG | 0.530608 | 2_1:+24719998 | None:intergenic |
| CAGAAGAACCGTGAACTGTA+AGG | 0.532860 | 2_1:+24716120 | None:intergenic |
| AGTTGTTATGAGCTTCATCA+AGG | 0.533763 | 2_1:-24715979 | Msa0202370:CDS |
| GCAATTGTTGGACATAGTAA+AGG | 0.544207 | 2_1:-24717330 | Msa0202370:intron |
| CTCTGGACGTTATGATCTGA+AGG | 0.550517 | 2_1:-24716662 | Msa0202370:CDS |
| GGACGTTATGATCTGAAGGC+AGG | 0.563099 | 2_1:-24716658 | Msa0202370:CDS |
| CGAGTGAATCGCAATGAACA+AGG | 0.572115 | 2_1:+24719911 | None:intergenic |
| ATGGATTCTACAATCATGAC+AGG | 0.573627 | 2_1:-24719581 | Msa0202370:intron |
| TTTCCAAATAATCTTTACCA+AGG | 0.575682 | 2_1:+24716623 | None:intergenic |
| TTTCATTCAATCAATTCCGC+CGG | 0.577261 | 2_1:-24719974 | Msa0202370:CDS |
| GGTATTATCACTCTCTGATG+AGG | 0.579146 | 2_1:+24719462 | None:intergenic |
| CATTTCCAGAAAAGTCAAAA+CGG | 0.584654 | 2_1:+24719186 | None:intergenic |
| TGCAGATTGACAAAGAATGC+AGG | 0.585351 | 2_1:-24716268 | Msa0202370:intron |
| TCGAAGGAATTCGGAGAACG+AGG | 0.589553 | 2_1:+24720014 | None:intergenic |
| GCAGGCATCGAAGAACGCCT+TGG | 0.591925 | 2_1:-24716640 | Msa0202370:CDS |
| TTCCAGTATGGTAACTATTG+GGG | 0.594109 | 2_1:-24717414 | Msa0202370:CDS |
| ATATTAGGATACCAATCTCA+TGG | 0.602667 | 2_1:-24719252 | Msa0202370:intron |
| AATGAAAACGGGAAACAACT+CGG | 0.603006 | 2_1:+24719990 | None:intergenic |
| GTTGGTATATTACATGAATG+TGG | 0.604507 | 2_1:-24719417 | Msa0202370:CDS |
| TCACTCGTTCAATCTCGAAA+CGG | 0.611635 | 2_1:-24719895 | Msa0202370:intron |
| GTGATAATACCCAACAAGCG+CGG | 0.627473 | 2_1:-24719450 | Msa0202370:CDS |
| CGAAGGAATTCGGAGAACGA+GGG | 0.630866 | 2_1:+24720015 | None:intergenic |
| TTAAACTTTCCTTAGTAACA+CGG | 0.641846 | 2_1:+24716327 | None:intergenic |
| TCGATTAGGATTCAGATCGC+CGG | 0.647415 | 2_1:+24719955 | None:intergenic |
| GAAAGTTTAATGGATCGCAT+GGG | 0.653917 | 2_1:-24716314 | Msa0202370:CDS |
| TTACCTTCCAGGGAAAGCGA+AGG | 0.663121 | 2_1:-24717441 | Msa0202370:intron |
| ATTAGGATTCAGATCGCCGG+CGG | 0.678477 | 2_1:+24719958 | None:intergenic |
| GATGAAGCTCATAACAACTG+AGG | 0.686040 | 2_1:+24715983 | None:intergenic |
| TCAGATCATAACGTCCAGAG+AGG | 0.713623 | 2_1:+24716665 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCCTTATAATAATTTTATTT+TGG | - | chr2_1:24718180-24718199 | Msa0202370:intron | 10.0% |
| !! | ACCAAAATAAAATTATTATA+AGG | + | chr2_1:24718184-24718203 | None:intergenic | 10.0% |
| !! | AATAATCAATGAAAATAATC+TGG | + | chr2_1:24716530-24716549 | None:intergenic | 15.0% |
| !! | AATTGAATATTAACTCAATA+TGG | + | chr2_1:24716683-24716702 | None:intergenic | 15.0% |
| !!! | ATATTCAATTTTACTATGTT+TGG | - | chr2_1:24716693-24716712 | Msa0202370:CDS | 15.0% |
| !! | GATCAATTAAAATCAATAAA+TGG | + | chr2_1:24716758-24716777 | None:intergenic | 15.0% |
| !! | ATTAGTTATTTATGATTAAC+AGG | + | chr2_1:24718073-24718092 | None:intergenic | 15.0% |
| !!! | AATTTTATTTTGGTATTAGA+TGG | - | chr2_1:24718190-24718209 | Msa0202370:intron | 15.0% |
| !! | ACTTATAAGTCGAAATAAAA+AGG | + | chr2_1:24716483-24716502 | None:intergenic | 20.0% |
| !!! | AGTTTTAATGTCATGATATT+TGG | + | chr2_1:24719118-24719137 | None:intergenic | 20.0% |
| !! | GATTATTAAATGATCATTTG+AGG | - | chr2_1:24719432-24719451 | Msa0202370:CDS | 20.0% |
| !! | TAACTTGATAAGTTTATCAA+GGG | + | chr2_1:24719621-24719640 | None:intergenic | 20.0% |
| !! | ATAACTTGATAAGTTTATCA+AGG | + | chr2_1:24719622-24719641 | None:intergenic | 20.0% |
| !! | AAGAATATTATAGGAAAATG+AGG | + | chr2_1:24719917-24719936 | None:intergenic | 20.0% |
| !! | TTGGAAAACAAGAATATTAT+AGG | + | chr2_1:24719926-24719945 | None:intergenic | 20.0% |
| !! | AATATCAACCAGTTCAATTT+TGG | + | chr2_1:24716081-24716100 | None:intergenic | 25.0% |
| ! | TATTAAGCGTGATTAGTATT+TGG | - | chr2_1:24716097-24716116 | Msa0202370:CDS | 25.0% |
| ! | ACATAAGATAACAATTTCGT+TGG | + | chr2_1:24716425-24716444 | None:intergenic | 25.0% |
| ! | GAAATTGTTATCTTATGTCA+TGG | - | chr2_1:24716427-24716446 | Msa0202370:intron | 25.0% |
| ! | AGTCGAAATAAAAAGGAAAA+AGG | + | chr2_1:24716476-24716495 | None:intergenic | 25.0% |
| ! | CAATGAAAATAATCTGGTAA+AGG | + | chr2_1:24716524-24716543 | None:intergenic | 25.0% |
| ! | GAACAATACTACAAATAGAT+AGG | - | chr2_1:24716806-24716825 | Msa0202370:intron | 25.0% |
| ! | AAGCTGAGAAATATAGAAAA+TGG | - | chr2_1:24716833-24716852 | Msa0202370:intron | 25.0% |
| !!! | AGTTTAATATTGGTTCAGTT+CGG | + | chr2_1:24716947-24716966 | None:intergenic | 25.0% |
| !! | CATCTTTTTCTTTTCTTTTC+TGG | + | chr2_1:24717599-24717618 | None:intergenic | 25.0% |
| ! | TAATTGAAATAGTGTGTTTC+TGG | - | chr2_1:24717976-24717995 | Msa0202370:intron | 25.0% |
| !! | TACCTGTTAATCATTTTCTT+TGG | - | chr2_1:24718033-24718052 | Msa0202370:intron | 25.0% |
| ! | AACCAAAGAAAATGATTAAC+AGG | + | chr2_1:24718038-24718057 | None:intergenic | 25.0% |
| ! | AGAAATTACTCTTACAATAG+CGG | - | chr2_1:24718098-24718117 | Msa0202370:intron | 25.0% |
| !!! | TTTTGGTTTATAGAGAAAAG+CGG | + | chr2_1:24718634-24718653 | None:intergenic | 25.0% |
| ! | TCTTCATATTGCATTATTCA+AGG | + | chr2_1:24718721-24718740 | None:intergenic | 25.0% |
| ! | ATAATGATCAAGTTCATATC+TGG | + | chr2_1:24718888-24718907 | None:intergenic | 25.0% |
| ! | TTTCCAAATAATCTTTACCA+AGG | + | chr2_1:24719191-24719210 | None:intergenic | 25.0% |
| ! | TTAAACTTTCCTTAGTAACA+CGG | + | chr2_1:24719487-24719506 | None:intergenic | 25.0% |
| ! | TGTTACTAAGGAAAGTTTAA+TGG | - | chr2_1:24719487-24719506 | Msa0202370:intron | 25.0% |
| GGAATTGATTGAATGAAAAC+GGG | + | chr2_1:24715835-24715854 | None:intergenic | 30.0% | |
| CGGAATTGATTGAATGAAAA+CGG | + | chr2_1:24715836-24715855 | None:intergenic | 30.0% | |
| !!! | CTTTGTTTCTGGATGATTTT+CGG | - | chr2_1:24716048-24716067 | Msa0202370:CDS | 30.0% |
| !!! | ACCAGTTCAATTTTGGTTTA+GGG | + | chr2_1:24716074-24716093 | None:intergenic | 30.0% |
| !!! | AACCAGTTCAATTTTGGTTT+AGG | + | chr2_1:24716075-24716094 | None:intergenic | 30.0% |
| ! | ATTACACTCTGTTTGGATTT+TGG | - | chr2_1:24716125-24716144 | Msa0202370:CDS | 30.0% |
| TTCTGAATATTCCGTTGTTT+AGG | - | chr2_1:24716162-24716181 | Msa0202370:intron | 30.0% | |
| TGTCTATTTGACCTAAACAA+CGG | + | chr2_1:24716176-24716195 | None:intergenic | 30.0% | |
| GAACACTATCTCAAATTCAA+TGG | - | chr2_1:24716211-24716230 | Msa0202370:intron | 30.0% | |
| GTTGGTATATTACATGAATG+TGG | - | chr2_1:24716394-24716413 | Msa0202370:intron | 30.0% | |
| ATATTAGGATACCAATCTCA+TGG | - | chr2_1:24716559-24716578 | Msa0202370:intron | 30.0% | |
| CATTTCCAGAAAAGTCAAAA+CGG | + | chr2_1:24716628-24716647 | None:intergenic | 30.0% | |
| !!! | GTTTTGACTTTTCTGGAAAT+GGG | - | chr2_1:24716627-24716646 | Msa0202370:CDS | 30.0% |
| TATGTTTGGATGTATAGAGA+TGG | - | chr2_1:24716707-24716726 | Msa0202370:CDS | 30.0% | |
| !!! | CAGTTTTGAACTTTTACACA+CGG | + | chr2_1:24716973-24716992 | None:intergenic | 30.0% |
| AGAATGAATTGAACCCAAAT+TGG | - | chr2_1:24717049-24717068 | Msa0202370:intron | 30.0% | |
| CAATGAATTTGGTCCAATTT+GGG | + | chr2_1:24717065-24717084 | None:intergenic | 30.0% | |
| TATGAATGAAATGAGTACCT+CGG | + | chr2_1:24717244-24717263 | None:intergenic | 30.0% | |
| ! | TCAATTTCATATGCCTTTTG+AGG | - | chr2_1:24717280-24717299 | Msa0202370:intron | 30.0% |
| !!! | TCTGGTTTTTAAGTGTGTTT+CGG | - | chr2_1:24717320-24717339 | Msa0202370:intron | 30.0% |
| TTTATTAGATTTCAGACCCA+TGG | - | chr2_1:24717525-24717544 | Msa0202370:intron | 30.0% | |
| !! | TTTTGAAAACCAGTTCAGTT+TGG | - | chr2_1:24717671-24717690 | Msa0202370:intron | 30.0% |
| TGGTTCAAACTATTGCATTA+TGG | - | chr2_1:24717691-24717710 | Msa0202370:intron | 30.0% | |
| CAAACTATTGCATTATGGTT+CGG | - | chr2_1:24717696-24717715 | Msa0202370:intron | 30.0% | |
| !! | TATGTTTTAAGCACACCAAA+CGG | + | chr2_1:24717820-24717839 | None:intergenic | 30.0% |
| CTCATTCATCCATCTATTTA+AGG | + | chr2_1:24717940-24717959 | None:intergenic | 30.0% | |
| ! | GGTTGTTAGTTTAGAATTGT+CGG | - | chr2_1:24718119-24718138 | Msa0202370:intron | 30.0% |
| TTTCTTTGCCTTGTGTAAAT+TGG | - | chr2_1:24718246-24718265 | Msa0202370:intron | 30.0% | |
| AATACCATCCAATTTACACA+AGG | + | chr2_1:24718257-24718276 | None:intergenic | 30.0% | |
| !! | TTTCTCTTAACTTTAGCTTG+TGG | - | chr2_1:24718346-24718365 | Msa0202370:intron | 30.0% |
| ! | AACAGTTCACGTCATAATTT+TGG | + | chr2_1:24718651-24718670 | None:intergenic | 30.0% |
| ACAAGTTTGGATAGGAAATT+AGG | + | chr2_1:24718809-24718828 | None:intergenic | 30.0% | |
| ! | CTTATTGACTACTAATCTCA+TGG | + | chr2_1:24718833-24718852 | None:intergenic | 30.0% |
| TTTGGAAAGAATTACGAATG+AGG | - | chr2_1:24719203-24719222 | Msa0202370:CDS | 30.0% | |
| TTGGAAAGAATTACGAATGA+GGG | - | chr2_1:24719204-24719223 | Msa0202370:CDS | 30.0% | |
| TAAGTTTATCAAGGGAGAAA+TGG | + | chr2_1:24719613-24719632 | None:intergenic | 30.0% | |
| ATGCCAAATTACGTCATATA+TGG | - | chr2_1:24719662-24719681 | Msa0202370:intron | 30.0% | |
| AAATTACGTCATATATGGCA+GGG | - | chr2_1:24719667-24719686 | Msa0202370:intron | 30.0% | |
| ATGATATGCAACTTGTGATT+TGG | + | chr2_1:24719764-24719783 | None:intergenic | 30.0% | |
| TAATTCAAACACCTTCATCA+TGG | - | chr2_1:24719970-24719989 | Msa0202370:CDS | 30.0% | |
| CTTCATCATGGTAAATAATC+CGG | - | chr2_1:24719982-24720001 | Msa0202370:CDS | 30.0% | |
| TCCGGATGAAGATATTAAAT+AGG | - | chr2_1:24720000-24720019 | Msa0202370:CDS | 30.0% | |
| CCCTATTTAATATCTTCATC+CGG | + | chr2_1:24720004-24720023 | None:intergenic | 30.0% | |
| CCGGATGAAGATATTAAATA+GGG | - | chr2_1:24720001-24720020 | Msa0202370:CDS | 30.0% | |
| AATGAAAACGGGAAACAACT+CGG | + | chr2_1:24715824-24715843 | None:intergenic | 35.0% | |
| TTTCATTCAATCAATTCCGC+CGG | - | chr2_1:24715837-24715856 | Msa0202370:three_prime_UTR | 35.0% | |
| ! | TCTTGATTCGTCAAATTCAG+TGG | - | chr2_1:24715996-24716015 | Msa0202370:CDS | 35.0% |
| ATGGATTCTACAATCATGAC+AGG | - | chr2_1:24716230-24716249 | Msa0202370:intron | 35.0% | |
| !!! | CTCTCATTTGTTTTTGTAGC+TGG | - | chr2_1:24716322-24716341 | Msa0202370:CDS | 35.0% |
| !!! | TCTTTCCGTTTTGACTTTTC+TGG | - | chr2_1:24716620-24716639 | Msa0202370:CDS | 35.0% |
| !!! | CGTTTTGACTTTTCTGGAAA+TGG | - | chr2_1:24716626-24716645 | Msa0202370:CDS | 35.0% |
| !!! | ACAAACATTTTGACTGCACA+TGG | + | chr2_1:24716780-24716799 | None:intergenic | 35.0% |
| GGATACATGTATTCTCAGTA+GGG | - | chr2_1:24716878-24716897 | Msa0202370:intron | 35.0% | |
| GATACATGTATTCTCAGTAG+GGG | - | chr2_1:24716879-24716898 | Msa0202370:intron | 35.0% | |
| TTCGGTTCAGTTCAATAGTT+TGG | + | chr2_1:24716929-24716948 | None:intergenic | 35.0% | |
| CACACGGTTCAGTTTAATAT+TGG | + | chr2_1:24716957-24716976 | None:intergenic | 35.0% | |
| GCAATGAATTTGGTCCAATT+TGG | + | chr2_1:24717066-24717085 | None:intergenic | 35.0% | |
| !! | TCATGCTTTGTAGGTTTTGT+TGG | + | chr2_1:24717104-24717123 | None:intergenic | 35.0% |
| AGGAATGAATCATGCTTTGT+AGG | + | chr2_1:24717113-24717132 | None:intergenic | 35.0% | |
| !! | GCATCTTTATGTTGGTGTTT+TGG | - | chr2_1:24717424-24717443 | Msa0202370:CDS | 35.0% |
| TAGTTTGAACCAAACTGAAC+TGG | + | chr2_1:24717683-24717702 | None:intergenic | 35.0% | |
| !! | GTTCAGTTTTGACACAGTTT+TGG | - | chr2_1:24717718-24717737 | Msa0202370:intron | 35.0% |
| !! | ATGTTTTAAGCACACCAAAC+GGG | + | chr2_1:24717819-24717838 | None:intergenic | 35.0% |
| !! | TTCACATTGACTCATTGACA+CGG | - | chr2_1:24717854-24717873 | Msa0202370:intron | 35.0% |
| TTTGCCTTGTGTAAATTGGA+TGG | - | chr2_1:24718250-24718269 | Msa0202370:intron | 35.0% | |
| CATAGCTAACAATGAAGACA+AGG | + | chr2_1:24718313-24718332 | None:intergenic | 35.0% | |
| GTTCCAGTATGGTAACTATT+GGG | - | chr2_1:24718396-24718415 | Msa0202370:intron | 35.0% | |
| TTCCAGTATGGTAACTATTG+GGG | - | chr2_1:24718397-24718416 | Msa0202370:intron | 35.0% | |
| GGATTACACGATTTGATTCA+CGG | + | chr2_1:24718459-24718478 | None:intergenic | 35.0% | |
| TACTATGTCCAACAATTGCA+CGG | + | chr2_1:24718480-24718499 | None:intergenic | 35.0% | |
| GCAATTGTTGGACATAGTAA+AGG | - | chr2_1:24718481-24718500 | Msa0202370:intron | 35.0% | |
| !! | TTGGACATAGTAAAGGTATC+TGG | - | chr2_1:24718488-24718507 | Msa0202370:intron | 35.0% |
| TTTATAGAGAAAAGCGGTTG+CGG | + | chr2_1:24718628-24718647 | None:intergenic | 35.0% | |
| CAATCTTAACATCCAAAGCA+GGG | + | chr2_1:24718695-24718714 | None:intergenic | 35.0% | |
| CTAATCTCATGGTACAAGTT+TGG | + | chr2_1:24718822-24718841 | None:intergenic | 35.0% | |
| ATCCATGATCTCAAATTCTG+AGG | - | chr2_1:24719000-24719019 | Msa0202370:intron | 35.0% | |
| CCTAAACAAATTTGCGTGAA+AGG | + | chr2_1:24719027-24719046 | None:intergenic | 35.0% | |
| ! | CCTTTCACGCAAATTTGTTT+AGG | - | chr2_1:24719024-24719043 | Msa0202370:intron | 35.0% |
| ! | GCAAATTTGTTTAGGCTGAT+TGG | - | chr2_1:24719032-24719051 | Msa0202370:intron | 35.0% |
| ACGCCTTGGTAAAGATTATT+TGG | - | chr2_1:24719185-24719204 | Msa0202370:CDS | 35.0% | |
| ! | TTTGGATTACCGTGTTACTA+AGG | - | chr2_1:24719475-24719494 | Msa0202370:intron | 35.0% |
| ! | GAAAGTTTAATGGATCGCAT+GGG | - | chr2_1:24719497-24719516 | Msa0202370:intron | 35.0% |
| ATTGACAAAGAATGCAGGTT+AGG | - | chr2_1:24719548-24719567 | Msa0202370:intron | 35.0% | |
| TTGACAAAGAATGCAGGTTA+GGG | - | chr2_1:24719549-24719568 | Msa0202370:intron | 35.0% | |
| ! | ATCTCTTCTCCTTTTACTTC+TGG | - | chr2_1:24719585-24719604 | Msa0202370:CDS | 35.0% |
| CTGCCATATATGACGTAATT+TGG | + | chr2_1:24719668-24719687 | None:intergenic | 35.0% | |
| CAAATTACGTCATATATGGC+AGG | - | chr2_1:24719666-24719685 | Msa0202370:intron | 35.0% | |
| ATGACTACTGTATGCATGAT+TGG | + | chr2_1:24719795-24719814 | None:intergenic | 35.0% | |
| AGTTGTTATGAGCTTCATCA+AGG | - | chr2_1:24719832-24719851 | Msa0202370:intron | 35.0% | |
| GAAACCATTGACCCTAATAA+GGG | - | chr2_1:24719854-24719873 | Msa0202370:intron | 35.0% | |
| CGGATTATTTACCATGATGA+AGG | + | chr2_1:24719984-24720003 | None:intergenic | 35.0% | |
| TCACTCGTTCAATCTCGAAA+CGG | - | chr2_1:24715916-24715935 | Msa0202370:three_prime_UTR | 40.0% | |
| ! | CGTGAAAAGCTCTTTGTTTC+TGG | - | chr2_1:24716037-24716056 | Msa0202370:CDS | 40.0% |
| GCCCTAAACCAAAATTGAAC+TGG | - | chr2_1:24716070-24716089 | Msa0202370:CDS | 40.0% | |
| ! | GGCTTTGATTACACTCTGTT+TGG | - | chr2_1:24716118-24716137 | Msa0202370:CDS | 40.0% |
| ATAGACACTCTCACACTCTA+AGG | - | chr2_1:24716189-24716208 | Msa0202370:intron | 40.0% | |
| GGTATTATCACTCTCTGATG+AGG | + | chr2_1:24716352-24716371 | None:intergenic | 40.0% | |
| AACAAGGTTCACCATGAGAT+TGG | + | chr2_1:24716573-24716592 | None:intergenic | 40.0% | |
| ! | ATGGACCATGCCATTTATGT+TGG | - | chr2_1:24716852-24716871 | Msa0202370:intron | 40.0% |
| ! | TGGACCATGCCATTTATGTT+GGG | - | chr2_1:24716853-24716872 | Msa0202370:intron | 40.0% |
| TGTATCCGTCCCAACATAAA+TGG | + | chr2_1:24716865-24716884 | None:intergenic | 40.0% | |
| CGGATACATGTATTCTCAGT+AGG | - | chr2_1:24716877-24716896 | Msa0202370:intron | 40.0% | |
| TCGCAAGAGAGCAATGAATT+TGG | + | chr2_1:24717076-24717095 | None:intergenic | 40.0% | |
| !!! | GCTTTGTAGGTTTTGTTGGA+TGG | + | chr2_1:24717100-24717119 | None:intergenic | 40.0% |
| !! | TTTTAAGTGTGTTTCGGCTG+TGG | - | chr2_1:24717326-24717345 | Msa0202370:intron | 40.0% |
| TTTAAGTGTGTTTCGGCTGT+GGG | - | chr2_1:24717327-24717346 | Msa0202370:intron | 40.0% | |
| ATGACAGAACAGCAGCTATT+AGG | - | chr2_1:24717382-24717401 | Msa0202370:CDS | 40.0% | |
| TGACAGAACAGCAGCTATTA+GGG | - | chr2_1:24717383-24717402 | Msa0202370:CDS | 40.0% | |
| TCAGCTGTGCATCTTTATGT+TGG | - | chr2_1:24717416-24717435 | Msa0202370:CDS | 40.0% | |
| !!! | CAGTAGCTGTTTTCTGGTTT+GGG | - | chr2_1:24717450-24717469 | Msa0202370:intron | 40.0% |
| !!! | AGTAGCTGTTTTCTGGTTTG+GGG | - | chr2_1:24717451-24717470 | Msa0202370:intron | 40.0% |
| ! | ATAGCTAGGGGCTTGAATTT+TGG | - | chr2_1:24717497-24717516 | Msa0202370:intron | 40.0% |
| GGAACAAAAACCAAACAGCA+AGG | + | chr2_1:24717557-24717576 | None:intergenic | 40.0% | |
| TTTGACCATCCCTAATTCTC+AGG | - | chr2_1:24717753-24717772 | Msa0202370:intron | 40.0% | |
| CCTAACGATCCTGAGAATTA+GGG | + | chr2_1:24717765-24717784 | None:intergenic | 40.0% | |
| TCCTAACGATCCTGAGAATT+AGG | + | chr2_1:24717766-24717785 | None:intergenic | 40.0% | |
| GTCAATGTGAATGTCAACAC+AGG | + | chr2_1:24717845-24717864 | None:intergenic | 40.0% | |
| CTGCACATGCCTTAAATAGA+TGG | - | chr2_1:24717928-24717947 | Msa0202370:intron | 40.0% | |
| GCTGTTTGATGCGATTTCTT+TGG | - | chr2_1:24717998-24718017 | Msa0202370:intron | 40.0% | |
| CGTTCCAGTATGGTAACTAT+TGG | - | chr2_1:24718395-24718414 | Msa0202370:intron | 40.0% | |
| ! | GCAGCACTAAAAGACAGTTT+TGG | + | chr2_1:24718580-24718599 | None:intergenic | 40.0% |
| !! | CGGGTAGCAACACTTTATTT+TGG | + | chr2_1:24718608-24718627 | None:intergenic | 40.0% |
| TTATAGAGAAAAGCGGTTGC+GGG | + | chr2_1:24718627-24718646 | None:intergenic | 40.0% | |
| ATTTCATGTCAACCCTGCTT+TGG | - | chr2_1:24718680-24718699 | Msa0202370:intron | 40.0% | |
| GCAATCTTAACATCCAAAGC+AGG | + | chr2_1:24718696-24718715 | None:intergenic | 40.0% | |
| CTCATGGTACAAGTTTGGAT+AGG | + | chr2_1:24718817-24718836 | None:intergenic | 40.0% | |
| !! | TATCTGGCATGGTTTTGCAA+AGG | + | chr2_1:24718872-24718891 | None:intergenic | 40.0% |
| GATCAAGTTCATATCTGGCA+TGG | + | chr2_1:24718883-24718902 | None:intergenic | 40.0% | |
| ! | GACCTCAGAATTTGAGATCA+TGG | + | chr2_1:24719005-24719024 | None:intergenic | 40.0% |
| AAAACTGTTGTCAACCTCTC+TGG | - | chr2_1:24719132-24719151 | Msa0202370:intron | 40.0% | |
| ATTGATGTGAAGACGAAGTC+AGG | - | chr2_1:24719231-24719250 | Msa0202370:CDS | 40.0% | |
| GAACTATCTTGTTCAATGCG+TGG | - | chr2_1:24719314-24719333 | Msa0202370:intron | 40.0% | |
| ATCTACTGTTGCAGGAAGTT+TGG | - | chr2_1:24719457-24719476 | Msa0202370:CDS | 40.0% | |
| ! | GGAAAGTTTAATGGATCGCA+TGG | - | chr2_1:24719496-24719515 | Msa0202370:intron | 40.0% |
| TGCATTCTTTGTCAATCTGC+AGG | + | chr2_1:24719544-24719563 | None:intergenic | 40.0% | |
| TGCAGATTGACAAAGAATGC+AGG | - | chr2_1:24719543-24719562 | Msa0202370:intron | 40.0% | |
| TGACAAAGAATGCAGGTTAG+GGG | - | chr2_1:24719550-24719569 | Msa0202370:intron | 40.0% | |
| GAAATGGAGCCAGAAGTAAA+AGG | + | chr2_1:24719597-24719616 | None:intergenic | 40.0% | |
| GATGAAGCTCATAACAACTG+AGG | + | chr2_1:24719831-24719850 | None:intergenic | 40.0% | |
| GGAAACCATTGACCCTAATA+AGG | - | chr2_1:24719853-24719872 | Msa0202370:intron | 40.0% | |
| AGCTAACAGTGCCCTTATTA+GGG | + | chr2_1:24719868-24719887 | None:intergenic | 40.0% | |
| TAGCTAACAGTGCCCTTATT+AGG | + | chr2_1:24719869-24719888 | None:intergenic | 40.0% | |
| !! | TAATAAGGGCACTGTTAGCT+AGG | - | chr2_1:24719868-24719887 | Msa0202370:intron | 40.0% |
| CCATAATCAGTAATGTCGCT+TGG | + | chr2_1:24719945-24719964 | None:intergenic | 40.0% | |
| ! | CCAAGCGACATTACTGATTA+TGG | - | chr2_1:24719942-24719961 | Msa0202370:CDS | 40.0% |
| CAACTCGGATCGAAGGAATT+CGG | + | chr2_1:24715809-24715828 | None:intergenic | 45.0% | |
| TCGATTAGGATTCAGATCGC+CGG | + | chr2_1:24715859-24715878 | None:intergenic | 45.0% | |
| ! | TTGAGCACTGTCGATCGATT+AGG | + | chr2_1:24715873-24715892 | None:intergenic | 45.0% |
| CGAGTGAATCGCAATGAACA+AGG | + | chr2_1:24715903-24715922 | None:intergenic | 45.0% | |
| TCTCGAAACGGTAAGATGCA+TGG | - | chr2_1:24715928-24715947 | Msa0202370:exon | 45.0% | |
| ! | CAGTGGCGAATTTGCGATTT+TGG | - | chr2_1:24716013-24716032 | Msa0202370:CDS | 45.0% |
| GTGATAATACCCAACAAGCG+CGG | - | chr2_1:24716361-24716380 | Msa0202370:intron | 45.0% | |
| ! | CCTTTTCCAATGCAGCAACA+AGG | + | chr2_1:24716589-24716608 | None:intergenic | 45.0% |
| CCTTGTTGCTGCATTGGAAA+AGG | - | chr2_1:24716586-24716605 | Msa0202370:CDS | 45.0% | |
| ! | CCATGCCATTTATGTTGGGA+CGG | - | chr2_1:24716857-24716876 | Msa0202370:intron | 45.0% |
| ACATGTATTCTCAGTAGGGG+TGG | - | chr2_1:24716882-24716901 | Msa0202370:intron | 45.0% | |
| CATGTATTCTCAGTAGGGGT+GGG | - | chr2_1:24716883-24716902 | Msa0202370:intron | 45.0% | |
| GAATCGTTACGGAAGGATCA+AGG | + | chr2_1:24717139-24717158 | None:intergenic | 45.0% | |
| CTTCCGTAACGATTCATCTC+CGG | - | chr2_1:24717144-24717163 | Msa0202370:intron | 45.0% | |
| TGACCGGAGATGAATCGTTA+CGG | + | chr2_1:24717150-24717169 | None:intergenic | 45.0% | |
| TGGAGATGAATCACTACCGA+GGG | + | chr2_1:24717210-24717229 | None:intergenic | 45.0% | |
| AGCAACAGCGTTACCTCAAA+AGG | + | chr2_1:24717296-24717315 | None:intergenic | 45.0% | |
| TTAAGTGTGTTTCGGCTGTG+GGG | - | chr2_1:24717328-24717347 | Msa0202370:intron | 45.0% | |
| !!! | GCAGTAGCTGTTTTCTGGTT+TGG | - | chr2_1:24717449-24717468 | Msa0202370:intron | 45.0% |
| !!! | GTAGCTGTTTTCTGGTTTGG+GGG | - | chr2_1:24717452-24717471 | Msa0202370:intron | 45.0% |
| !!! | TAGCTGTTTTCTGGTTTGGG+GGG | - | chr2_1:24717453-24717472 | Msa0202370:intron | 45.0% |
| !! | TGGTTGGTTTAGGCATAGCT+AGG | - | chr2_1:24717483-24717502 | Msa0202370:intron | 45.0% |
| !! | GGTTGGTTTAGGCATAGCTA+GGG | - | chr2_1:24717484-24717503 | Msa0202370:intron | 45.0% |
| ! | GTTGGTTTAGGCATAGCTAG+GGG | - | chr2_1:24717485-24717504 | Msa0202370:intron | 45.0% |
| GGTGATAGAGAAAGCAAGAC+AGG | + | chr2_1:24717578-24717597 | None:intergenic | 45.0% | |
| ACGATCCTGAGAATTAGGGA+TGG | + | chr2_1:24717761-24717780 | None:intergenic | 45.0% | |
| CCCTAATTCTCAGGATCGTT+AGG | - | chr2_1:24717762-24717781 | Msa0202370:intron | 45.0% | |
| ACTTTGAACTTGTGCCCGTT+TGG | - | chr2_1:24717802-24717821 | Msa0202370:intron | 45.0% | |
| TTAAGGCATGTGCAGACAAC+TGG | + | chr2_1:24717923-24717942 | None:intergenic | 45.0% | |
| ! | TAGCTTGTGGATTACCTTCC+AGG | - | chr2_1:24718359-24718378 | Msa0202370:intron | 45.0% |
| ! | AGCTTGTGGATTACCTTCCA+GGG | - | chr2_1:24718360-24718379 | Msa0202370:intron | 45.0% |
| CTCCCCAATAGTTACCATAC+TGG | + | chr2_1:24718402-24718421 | None:intergenic | 45.0% | |
| TGGTAACTATTGGGGAGAGA+TGG | - | chr2_1:24718405-24718424 | Msa0202370:intron | 45.0% | |
| CGTGTAATCCGTGCAATTGT+TGG | - | chr2_1:24718469-24718488 | Msa0202370:intron | 45.0% | |
| TCAGATCATAACGTCCAGAG+AGG | + | chr2_1:24719149-24719168 | None:intergenic | 45.0% | |
| CTCTGGACGTTATGATCTGA+AGG | - | chr2_1:24719149-24719168 | Msa0202370:intron | 45.0% | |
| TTGAGGACATCTACTGTTGC+AGG | - | chr2_1:24719449-24719468 | Msa0202370:CDS | 45.0% | |
| CAGAAGAACCGTGAACTGTA+AGG | + | chr2_1:24719694-24719713 | None:intergenic | 45.0% | |
| AGTGCCCTTATTAGGGTCAA+TGG | + | chr2_1:24719861-24719880 | None:intergenic | 45.0% | |
| TTAGCTAGGTCTGTCTTGCT+TGG | - | chr2_1:24719882-24719901 | Msa0202370:intron | 45.0% | |
| !!! | ATTATTTTTTTTTGTATATT+AGG | - | chr2_1:24716544-24716563 | Msa0202370:intron | 5.0% |
| CGAAGGAATTCGGAGAACGA+GGG | + | chr2_1:24715799-24715818 | None:intergenic | 50.0% | |
| TCGAAGGAATTCGGAGAACG+AGG | + | chr2_1:24715800-24715819 | None:intergenic | 50.0% | |
| ATTAGGATTCAGATCGCCGG+CGG | + | chr2_1:24715856-24715875 | None:intergenic | 50.0% | |
| ! | AGTTTTTCGCCGCGCTTGTT+GGG | + | chr2_1:24716373-24716392 | None:intergenic | 50.0% |
| ! | AAGTTTTTCGCCGCGCTTGT+TGG | + | chr2_1:24716374-24716393 | None:intergenic | 50.0% |
| AAGCGCGGCGAAAAACTTGT+TGG | - | chr2_1:24716376-24716395 | Msa0202370:intron | 50.0% | |
| GGTGAACCTTGTTGCTGCAT+TGG | - | chr2_1:24716580-24716599 | Msa0202370:intron | 50.0% | |
| CCGTCCCAACATAAATGGCA+TGG | + | chr2_1:24716860-24716879 | None:intergenic | 50.0% | |
| TCGTTACGGAAGGATCAAGG+CGG | + | chr2_1:24717136-24717155 | None:intergenic | 50.0% | |
| CGGAGATGAATCGTTACGGA+AGG | + | chr2_1:24717146-24717165 | None:intergenic | 50.0% | |
| GTGGAGATGAATCACTACCG+AGG | + | chr2_1:24717211-24717230 | None:intergenic | 50.0% | |
| !! | TGGCTGCAGTAGCTGTTTTC+TGG | - | chr2_1:24717444-24717463 | Msa0202370:intron | 50.0% |
| AACAGCAAGGCAACAGCCAT+GGG | + | chr2_1:24717544-24717563 | None:intergenic | 50.0% | |
| AAACAGCAAGGCAACAGCCA+TGG | + | chr2_1:24717545-24717564 | None:intergenic | 50.0% | |
| !! | ATGGCTGTTGCCTTGCTGTT+TGG | - | chr2_1:24717544-24717563 | Msa0202370:intron | 50.0% |
| TTACCTTCCAGGGAAAGCGA+AGG | - | chr2_1:24718370-24718389 | Msa0202370:intron | 50.0% | |
| AGCGAAGGTTCGTTCCAGTA+TGG | - | chr2_1:24718385-24718404 | Msa0202370:intron | 50.0% | |
| TTGCTTCTGTGTCGTGATGC+AGG | - | chr2_1:24719066-24719085 | Msa0202370:intron | 50.0% | |
| GGACGTTATGATCTGAAGGC+AGG | - | chr2_1:24719153-24719172 | Msa0202370:intron | 50.0% | |
| AACTCGTGCGCACTTTGAAC+TGG | + | chr2_1:24719728-24719747 | None:intergenic | 50.0% | |
| CGGGAAACAACTCGGATCGA+AGG | + | chr2_1:24715816-24715835 | None:intergenic | 55.0% | |
| TTACGGAAGGATCAAGGCGG+AGG | + | chr2_1:24717133-24717152 | None:intergenic | 55.0% | |
| TGTCGTGATCCCTCCATCTC+CGG | - | chr2_1:24717171-24717190 | Msa0202370:intron | 55.0% | |
| GTAACGCTGTTGCTGTCGTC+TGG | - | chr2_1:24717302-24717321 | Msa0202370:intron | 55.0% | |
| !! | GGGCTGTTGCTGGTTGGTTT+AGG | - | chr2_1:24717473-24717492 | Msa0202370:intron | 55.0% |
| GAACCTTCGCTTTCCCTGGA+AGG | + | chr2_1:24718376-24718395 | None:intergenic | 55.0% | |
| GAACGAACCTTCGCTTTCCC+TGG | + | chr2_1:24718380-24718399 | None:intergenic | 55.0% | |
| CTTCTGTGTCGTGATGCAGG+AGG | - | chr2_1:24719069-24719088 | Msa0202370:intron | 55.0% | |
| GGCAGGGTCCTTACAGTTCA+CGG | - | chr2_1:24719683-24719702 | Msa0202370:intron | 55.0% | |
| GGAGGGATCACGACAGTGAC+CGG | + | chr2_1:24717166-24717185 | None:intergenic | 60.0% | |
| TCACTACCGAGGGATCCCGA+CGG | + | chr2_1:24717200-24717219 | None:intergenic | 60.0% | |
| AGTGTGTTTCGGCTGTGGGG+TGG | - | chr2_1:24717331-24717350 | Msa0202370:CDS | 60.0% | |
| TTTGGGGGGCTGTTGCTGGT+TGG | - | chr2_1:24717467-24717486 | Msa0202370:intron | 60.0% | |
| !! | GCAGGCATCGAAGAACGCCT+TGG | - | chr2_1:24719171-24719190 | Msa0202370:intron | 60.0% |
| CGACGGTGACCGGAGATGGA+GGG | + | chr2_1:24717183-24717202 | None:intergenic | 65.0% | |
| CCTCCATCTCCGGTCACCGT+CGG | - | chr2_1:24717181-24717200 | Msa0202370:intron | 65.0% | |
| CTCCATCTCCGGTCACCGTC+GGG | - | chr2_1:24717182-24717201 | Msa0202370:intron | 65.0% | |
| ATCCCGACGGTGACCGGAGA+TGG | + | chr2_1:24717187-24717206 | None:intergenic | 65.0% | |
| TCTCCACTGCTGCAGCTCCG+AGG | - | chr2_1:24717224-24717243 | Msa0202370:intron | 65.0% | |
| GTACCTCGGAGCTGCAGCAG+TGG | + | chr2_1:24717230-24717249 | None:intergenic | 65.0% | |
| !! | CTGGTTTGGGGGGCTGTTGC+TGG | - | chr2_1:24717463-24717482 | Msa0202370:intron | 65.0% |
| CCGACGGTGACCGGAGATGG+AGG | + | chr2_1:24717184-24717203 | None:intergenic | 70.0% | |
| CGAGGGATCCCGACGGTGAC+CGG | + | chr2_1:24717193-24717212 | None:intergenic | 70.0% | |
| CGGTCACCGTCGGGATCCCT+CGG | - | chr2_1:24717191-24717210 | Msa0202370:intron | 70.0% | |
| ! | TCGGCTGTGGGGTGGCTTGC+TGG | - | chr2_1:24717339-24717358 | Msa0202370:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 24715786 | 24720047 | 24715786 | ID=Msa0202370;Name=Msa0202370 |
| chr2_1 | mRNA | 24715786 | 24720047 | 24715786 | ID=Msa0202370-mRNA-1;Parent=Msa0202370;Name=Msa0202370-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.87|1|1|1|8|158|336 |
| chr2_1 | exon | 24715786 | 24716145 | 24715786 | ID=Msa0202370-mRNA-1:exon:9469;Parent=Msa0202370-mRNA-1 |
| chr2_1 | exon | 24716269 | 24716362 | 24716269 | ID=Msa0202370-mRNA-1:exon:9468;Parent=Msa0202370-mRNA-1 |
| chr2_1 | exon | 24716581 | 24716745 | 24716581 | ID=Msa0202370-mRNA-1:exon:9467;Parent=Msa0202370-mRNA-1 |
| chr2_1 | exon | 24717331 | 24717452 | 24717331 | ID=Msa0202370-mRNA-1:exon:9466;Parent=Msa0202370-mRNA-1 |
| chr2_1 | exon | 24719185 | 24719267 | 24719185 | ID=Msa0202370-mRNA-1:exon:9465;Parent=Msa0202370-mRNA-1 |
| chr2_1 | exon | 24719368 | 24719492 | 24719368 | ID=Msa0202370-mRNA-1:exon:9464;Parent=Msa0202370-mRNA-1 |
| chr2_1 | exon | 24719582 | 24719649 | 24719582 | ID=Msa0202370-mRNA-1:exon:9463;Parent=Msa0202370-mRNA-1 |
| chr2_1 | exon | 24719896 | 24720047 | 24719896 | ID=Msa0202370-mRNA-1:exon:9462;Parent=Msa0202370-mRNA-1 |
| chr2_1 | CDS | 24719896 | 24720047 | 24719896 | ID=Msa0202370-mRNA-1:cds;Parent=Msa0202370-mRNA-1 |
| chr2_1 | CDS | 24719582 | 24719649 | 24719582 | ID=Msa0202370-mRNA-1:cds;Parent=Msa0202370-mRNA-1 |
| chr2_1 | CDS | 24719368 | 24719492 | 24719368 | ID=Msa0202370-mRNA-1:cds;Parent=Msa0202370-mRNA-1 |
| chr2_1 | CDS | 24719185 | 24719267 | 24719185 | ID=Msa0202370-mRNA-1:cds;Parent=Msa0202370-mRNA-1 |
| chr2_1 | CDS | 24717331 | 24717452 | 24717331 | ID=Msa0202370-mRNA-1:cds;Parent=Msa0202370-mRNA-1 |
| chr2_1 | CDS | 24716581 | 24716745 | 24716581 | ID=Msa0202370-mRNA-1:cds;Parent=Msa0202370-mRNA-1 |
| chr2_1 | CDS | 24716269 | 24716362 | 24716269 | ID=Msa0202370-mRNA-1:cds;Parent=Msa0202370-mRNA-1 |
| chr2_1 | CDS | 24715944 | 24716145 | 24715944 | ID=Msa0202370-mRNA-1:cds;Parent=Msa0202370-mRNA-1 |
| chr2_1 | three_prime_UTR | 24715786 | 24715943 | 24715786 | ID=Msa0202370-mRNA-1:three_prime_utr;Parent=Msa0202370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
