AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1183390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183390 MtrunA17_Chr8g0335951 96.629 267 9 0 320 586 190 456 0.0 540
Msa1183390 MtrunA17_Chr8g0335951 60.819 342 117 4 44 385 1 325 3.29e-131 391
Msa1183390 MtrunA17_Chr8g0349421 96.721 244 8 0 343 586 1 244 5.04e-174 492
Msa1183390 MtrunA17_Chr8g0349431 98.400 125 2 0 130 254 1 125 9.36e-84 257
Msa1183390 MtrunA17_Chr8g0368151 31.481 486 322 5 102 578 1 484 2.74e-80 261
Msa1183390 MtrunA17_Chr1g0185601 34.186 430 273 6 122 546 36 460 3.95e-80 261
Msa1183390 MtrunA17_Chr1g0194521 34.100 478 299 7 91 567 68 530 8.82e-79 258
Msa1183390 MtrunA17_Chr8g0359961 32.243 428 287 3 124 550 35 460 2.39e-73 243
Msa1183390 MtrunA17_Chr2g0324251 32.957 443 285 6 117 551 27 465 5.17e-72 239
Msa1183390 MtrunA17_Chr2g0303221 32.877 438 288 6 122 557 31 464 1.52e-70 235
Msa1183390 MtrunA17_Chr4g0021331 32.569 436 282 7 122 551 27 456 3.24e-69 232
Msa1183390 MtrunA17_Chr3g0132571 27.553 519 344 8 69 578 3 498 6.31e-69 231
Msa1183390 MtrunA17_Chr2g0282091 30.388 464 307 6 115 572 26 479 8.62e-66 223
Msa1183390 MtrunA17_Chr2g0289531 58.730 126 23 1 394 519 1 97 5.24e-41 144
Msa1183390 MtrunA17_Chr1g0155351 28.239 301 214 2 134 433 66 365 6.59e-41 153
Msa1183390 MtrunA17_Chr1g0171501 25.436 401 289 7 140 540 157 547 2.92e-29 122
Msa1183390 MtrunA17_Chr7g0256181 25.598 418 297 9 124 540 160 564 1.92e-28 120
Msa1183390 MtrunA17_Chr2g0328121 22.300 426 316 7 122 540 44 461 9.29e-28 117
Msa1183390 MtrunA17_Chr1g0168811 21.543 311 232 3 186 489 211 516 8.42e-19 90.1
Msa1183390 MtrunA17_Chr1g0168811 21.707 410 272 11 168 571 159 525 1.20e-11 67.4
Msa1183390 MtrunA17_Chr3g0143411 20.263 380 288 7 166 540 155 524 1.31e-16 83.2
Msa1183390 MtrunA17_Chr1g0200211 23.754 341 246 7 226 558 175 509 2.78e-16 82.4
Msa1183390 MtrunA17_Chr8g0359551 28.502 207 147 1 285 491 203 408 3.19e-16 82.0
Msa1183390 MtrunA17_Chr8g0359551 21.852 270 210 1 226 495 214 482 3.75e-13 72.4
Msa1183390 MtrunA17_Chr3g0099661 22.324 327 245 6 156 476 170 493 3.45e-16 82.4
Msa1183390 MtrunA17_Chr3g0099661 23.194 263 167 9 220 462 582 829 5.32e-12 68.9
Msa1183390 MtrunA17_Chr3g0099661 22.840 324 226 8 221 534 344 653 3.31e-11 66.2
Msa1183390 MtrunA17_Chr4g0059671 26.172 256 179 5 226 476 175 425 4.39e-16 82.0
Msa1183390 MtrunA17_Chr8g0377751 20.669 329 224 6 202 494 674 1001 5.50e-15 78.6
Msa1183390 MtrunA17_Chr7g0220501 22.319 345 241 7 195 536 367 687 1.15e-14 77.4
Msa1183390 MtrunA17_Chr7g0220501 25.896 251 146 5 260 473 320 567 8.50e-12 68.2
Msa1183390 MtrunA17_Chr5g0446031 19.943 351 274 4 146 494 406 751 1.46e-14 77.4
Msa1183390 MtrunA17_Chr5g0446031 23.600 250 177 5 242 489 579 816 7.26e-13 71.6
Msa1183390 MtrunA17_Chr5g0446031 22.145 289 208 8 226 505 205 485 2.65e-11 66.6
Msa1183390 MtrunA17_Chr2g0290441 20.217 277 217 3 223 496 218 493 2.24e-14 76.3
Msa1183390 MtrunA17_Chr2g0290441 22.353 255 196 2 241 494 130 383 2.95e-11 66.2
Msa1183390 MtrunA17_Chr3g0126831 22.420 281 210 3 281 561 287 559 4.57e-14 75.5
Msa1183390 MtrunA17_Chr4g0033981 22.727 264 200 2 226 489 324 583 4.59e-14 75.1
Msa1183390 MtrunA17_Chr2g0297991 19.624 372 289 7 110 473 117 486 1.01e-13 74.3
Msa1183390 MtrunA17_Chr2g0297991 22.823 333 243 8 223 550 377 700 1.55e-11 67.4
Msa1183390 MtrunA17_Chr2g0297991 22.667 300 214 6 201 495 537 823 3.77e-11 66.2
Msa1183390 MtrunA17_Chr4g0037841 21.033 271 206 4 226 491 237 504 2.38e-13 72.8
Msa1183390 MtrunA17_Chr4g0060341 20.489 327 247 6 226 546 237 556 4.16e-13 72.0
Msa1183390 MtrunA17_Chr3g0136851 23.843 281 203 6 195 469 274 549 7.69e-13 71.6
Msa1183390 MtrunA17_Chr8g0392911 21.307 352 267 5 227 575 198 542 8.49e-13 71.2
Msa1183390 MtrunA17_Chr8g0368891 19.926 271 216 1 226 496 383 652 9.71e-13 71.2
Msa1183390 MtrunA17_Chr7g0241721 20.611 393 303 5 171 560 3 389 1.33e-12 70.5
Msa1183390 MtrunA17_Chr7g0256621 22.327 318 230 6 227 537 153 460 1.34e-12 70.5
Msa1183390 MtrunA17_Chr4g0054821 24.444 315 211 7 218 523 254 550 1.95e-12 70.1
Msa1183390 MtrunA17_Chr8g0353181 24.107 336 212 7 226 560 202 495 2.28e-12 69.7
Msa1183390 MtrunA17_Chr7g0214351 22.152 316 234 7 226 537 313 620 2.41e-12 70.1
Msa1183390 MtrunA17_Chr5g0396041 20.238 420 317 8 152 562 193 603 3.66e-12 69.7
Msa1183390 MtrunA17_Chr7g0220481 23.214 280 203 4 196 473 263 532 3.70e-12 69.3
Msa1183390 MtrunA17_Chr5g0394721 21.407 327 243 6 157 477 206 524 5.14e-12 68.6
Msa1183390 MtrunA17_Chr5g0394721 22.807 285 214 3 222 502 236 518 4.70e-11 65.5
Msa1183390 MtrunA17_Chr8g0382891 22.193 374 230 10 147 469 73 436 5.43e-12 68.2
Msa1183390 MtrunA17_Chr1g0162281 19.461 334 259 5 221 551 226 552 7.08e-12 68.6
Msa1183390 MtrunA17_Chr7g0215561 21.975 314 237 5 226 537 312 619 8.90e-12 68.2
Msa1183390 MtrunA17_Chr8g0387281 21.587 315 233 5 171 478 332 639 9.57e-12 67.8
Msa1183390 MtrunA17_Chr8g0387281 22.527 364 263 8 226 575 239 597 3.19e-11 66.2
Msa1183390 MtrunA17_Chr6g0458411 19.429 350 272 3 221 570 231 570 1.02e-11 67.8
Msa1183390 MtrunA17_Chr6g0458411 23.514 387 243 10 227 568 98 476 7.72e-11 65.1
Msa1183390 MtrunA17_Chr2g0331911 23.077 312 232 5 242 550 178 484 1.03e-11 67.8
Msa1183390 MtrunA17_Chr7g0246931 21.409 369 272 10 136 495 157 516 1.17e-11 67.4
Msa1183390 MtrunA17_Chr8g0369641 20.301 266 207 3 226 489 493 755 1.31e-11 67.8
Msa1183390 MtrunA17_Chr8g0391651 22.182 275 209 3 223 495 416 687 2.25e-11 67.0
Msa1183390 MtrunA17_Chr1g0170071 26.380 163 117 2 213 373 675 836 3.47e-11 66.2
Msa1183390 MtrunA17_Chr1g0210801 20.938 320 244 6 151 465 97 412 3.75e-11 65.9
Msa1183390 MtrunA17_Chr6g0478691 21.053 323 249 3 226 547 245 562 5.13e-11 65.5
Msa1183390 MtrunA17_Chr2g0296401 24.901 253 176 6 224 465 239 488 5.22e-11 65.9
Msa1183390 MtrunA17_Chr2g0332881 21.930 342 253 7 215 551 266 598 6.12e-11 65.5
Msa1183390 MtrunA17_Chr7g0241871 21.270 315 239 4 229 541 99 406 6.16e-11 65.5
Msa1183390 MtrunA17_Chr4g0038401 23.684 266 163 6 226 489 360 587 6.55e-11 65.5
Msa1183390 MtrunA17_Chr8g0365781 22.376 362 247 6 139 476 494 845 9.51e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183390 AT1G02150.1 57.519 532 210 4 53 582 3 520 0.0 638
Msa1183390 AT1G60770.1 32.289 415 277 2 124 536 25 437 3.11e-76 251
Msa1183390 AT4G02820.1 32.029 409 273 4 142 550 81 484 5.67e-74 246
Msa1183390 AT4G01990.1 33.796 432 282 3 120 550 37 465 6.00e-73 242
Msa1183390 AT1G02370.1 34.524 420 260 6 124 535 73 485 2.77e-72 241
Msa1183390 AT2G20710.1 33.254 421 277 4 121 540 37 454 3.70e-72 240
Msa1183390 AT5G27460.1 31.121 437 296 2 126 558 42 477 3.46e-68 229
Msa1183390 AT4G21705.1 29.574 470 322 5 119 581 22 489 1.23e-66 225
Msa1183390 AT2G20710.2 34.561 353 228 3 189 540 9 359 6.69e-62 210
Msa1183390 AT5G09450.1 31.746 315 207 4 114 426 52 360 2.11e-49 177
Msa1183390 AT1G28020.1 31.233 365 235 5 92 454 19 369 7.43e-45 166
Msa1183390 AT1G80270.1 27.273 385 270 6 120 503 128 503 3.05e-36 143
Msa1183390 AT1G80270.3 27.273 385 270 6 120 503 128 503 3.05e-36 143
Msa1183390 AT1G80270.2 27.273 385 270 6 120 503 128 503 3.05e-36 143
Msa1183390 AT1G80270.5 27.273 385 270 6 120 503 128 503 3.05e-36 143
Msa1183390 AT1G80270.4 27.273 385 270 6 120 503 128 503 3.05e-36 143
Msa1183390 AT1G15480.1 25.806 434 298 10 124 550 130 546 1.14e-32 133
Msa1183390 AT1G07590.1 23.587 407 303 5 139 541 82 484 7.77e-27 115
Msa1183390 AT3G11380.1 30.945 307 161 10 160 454 81 348 2.03e-25 110
Msa1183390 AT3G11380.1 30.899 178 120 3 141 316 365 541 1.55e-14 77.0
Msa1183390 AT3G15590.1 26.420 405 279 9 141 540 160 550 7.40e-25 109
Msa1183390 AT3G15590.2 26.420 405 279 9 141 540 160 550 7.40e-25 109
Msa1183390 AT5G02860.1 24.848 330 239 6 153 476 134 460 1.34e-18 90.5
Msa1183390 AT5G02860.1 24.074 324 235 4 223 543 313 628 1.80e-16 83.6
Msa1183390 AT5G02860.4 24.848 330 239 6 153 476 134 460 1.34e-18 90.5
Msa1183390 AT5G02860.4 24.074 324 235 4 223 543 313 628 1.80e-16 83.6
Msa1183390 AT5G02860.2 24.848 330 239 6 153 476 134 460 1.34e-18 90.5
Msa1183390 AT5G02860.2 24.074 324 235 4 223 543 313 628 1.80e-16 83.6
Msa1183390 AT5G02860.5 24.848 330 239 6 153 476 134 460 1.34e-18 90.5
Msa1183390 AT5G02860.5 24.074 324 235 4 223 543 313 628 1.80e-16 83.6
Msa1183390 AT5G02860.3 24.848 330 239 6 153 476 134 460 1.34e-18 90.5
Msa1183390 AT5G02860.3 24.074 324 235 4 223 543 313 628 1.80e-16 83.6
Msa1183390 AT1G28000.1 26.800 250 178 5 142 387 53 301 1.48e-18 88.6
Msa1183390 AT1G03560.1 23.792 269 203 2 223 490 256 523 2.34e-15 79.7
Msa1183390 AT1G74580.2 23.353 334 231 8 217 538 413 733 4.59e-15 79.0
Msa1183390 AT1G74580.1 23.353 334 231 8 217 538 413 733 4.59e-15 79.0
Msa1183390 AT1G74580.3 23.353 334 231 8 217 538 413 733 4.59e-15 79.0
Msa1183390 AT4G30825.1 23.077 338 229 10 173 495 542 863 5.44e-15 79.0
Msa1183390 AT3G18110.1 22.802 364 267 8 151 505 153 511 5.66e-15 79.3
Msa1183390 AT5G01110.1 21.034 290 212 6 265 551 425 700 1.88e-14 77.0
Msa1183390 AT5G01110.1 21.289 357 266 6 145 495 158 505 2.42e-11 67.0
Msa1183390 AT5G01110.2 21.034 290 212 6 265 551 453 728 1.96e-14 77.0
Msa1183390 AT5G01110.2 21.289 357 266 6 145 495 186 533 2.49e-11 67.0
Msa1183390 AT3G06920.2 19.316 497 321 9 140 565 203 690 3.56e-14 76.3
Msa1183390 AT3G06920.3 19.316 497 321 9 140 565 203 690 3.56e-14 76.3
Msa1183390 AT3G06920.1 19.316 497 321 9 140 565 189 676 3.78e-14 76.3
Msa1183390 AT1G30290.2 21.408 341 258 4 231 565 284 620 5.23e-14 75.9
Msa1183390 AT1G30290.1 21.408 341 258 4 231 565 284 620 5.53e-14 75.9
Msa1183390 AT2G18940.1 22.910 323 240 5 223 543 350 665 1.41e-13 74.3
Msa1183390 AT2G31400.2 22.050 322 210 9 226 536 411 702 1.95e-13 73.9
Msa1183390 AT2G31400.2 20.293 409 317 5 160 564 202 605 1.86e-12 70.9
Msa1183390 AT2G31400.1 22.050 322 210 9 226 536 411 702 2.98e-13 73.6
Msa1183390 AT2G31400.1 20.293 409 317 5 160 564 202 605 2.50e-12 70.5
Msa1183390 AT5G46580.1 22.615 283 214 4 218 496 250 531 3.41e-13 73.2
Msa1183390 AT1G63150.2 24.354 271 198 5 223 490 152 418 3.80e-13 72.8
Msa1183390 AT1G63150.1 24.354 271 198 5 223 490 152 418 3.80e-13 72.8
Msa1183390 AT2G32630.1 19.294 425 298 7 165 551 200 617 7.51e-13 72.0
Msa1183390 AT5G65560.1 23.396 265 199 4 226 489 395 656 8.62e-13 72.0
Msa1183390 AT5G65560.2 23.396 265 199 4 226 489 395 656 8.62e-13 72.0
Msa1183390 AT5G65560.3 23.396 265 199 4 226 489 395 656 8.62e-13 72.0
Msa1183390 AT1G43010.1 28.139 231 145 6 127 350 41 257 1.11e-12 68.9
Msa1183390 AT3G22670.1 20.087 229 176 4 148 373 197 421 2.28e-12 70.1
Msa1183390 AT5G25630.3 27.072 181 125 4 223 401 208 383 2.46e-12 70.1
Msa1183390 AT5G25630.1 27.072 181 125 4 223 401 259 434 2.99e-12 69.7
Msa1183390 AT1G63230.1 21.118 322 240 6 223 541 9 319 3.56e-12 68.2
Msa1183390 AT1G62590.2 23.671 414 287 11 160 561 231 627 3.61e-12 69.7
Msa1183390 AT1G62590.1 23.671 414 287 11 160 561 231 627 3.61e-12 69.7
Msa1183390 AT1G51965.1 21.198 434 276 13 181 560 146 567 4.42e-12 69.3
Msa1183390 AT1G20300.1 19.938 321 235 5 166 476 163 471 5.17e-12 68.9
Msa1183390 AT1G10910.2 19.597 347 238 5 174 483 118 460 6.79e-12 68.9
Msa1183390 AT1G74900.1 22.096 353 256 9 153 495 52 395 7.66e-12 68.2
Msa1183390 AT1G10910.1 19.597 347 238 5 174 483 118 460 8.00e-12 68.6
Msa1183390 AT2G15630.1 20.728 357 247 5 226 550 262 614 8.23e-12 68.6
Msa1183390 AT1G63330.3 23.618 398 267 12 182 561 174 552 1.01e-11 68.2
Msa1183390 AT1G63330.1 23.618 398 267 12 182 561 174 552 1.01e-11 68.2
Msa1183390 AT1G63330.2 23.618 398 267 12 182 561 174 552 1.01e-11 68.2
Msa1183390 AT2G35030.1 19.849 398 272 12 159 544 4 366 1.32e-11 67.8
Msa1183390 AT5G42310.1 22.699 326 237 7 223 543 373 688 1.32e-11 68.2
Msa1183390 AT5G04810.1 26.344 186 134 2 202 385 670 854 1.62e-11 67.8
Msa1183390 AT1G62910.1 21.324 408 304 7 160 561 229 625 2.94e-11 66.6
Msa1183390 AT5G48730.1 22.455 334 243 7 193 517 149 475 3.61e-11 66.2
Msa1183390 AT1G62670.2 22.727 352 224 10 226 538 153 495 5.34e-11 65.9
Msa1183390 AT1G62670.1 22.727 352 224 10 226 538 153 495 5.34e-11 65.9
Msa1183390 AT1G63070.1 19.944 356 269 6 215 561 235 583 5.60e-11 65.9
Msa1183390 AT5G16640.1 21.958 337 252 6 159 490 86 416 6.61e-11 65.5
Msa1183390 AT4G20090.2 21.569 357 266 7 170 519 164 513 7.01e-11 65.5
Msa1183390 AT4G20090.2 22.167 203 157 1 226 428 329 530 8.79e-11 65.5
Msa1183390 AT4G20090.1 21.569 357 266 7 170 519 164 513 7.01e-11 65.5
Msa1183390 AT4G20090.1 22.167 203 157 1 226 428 329 530 8.79e-11 65.5
Msa1183390 AT4G31850.1 20.764 419 315 6 83 495 226 633 7.88e-11 65.9
Msa1183390 AT5G61990.1 20.147 273 212 3 221 489 554 824 8.74e-11 65.5
Msa1183390 AT4G39620.2 22.289 332 241 10 160 480 103 428 9.65e-11 65.1

Find 143 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGACTTGTGTCTTTAAATT+TGG 0.114196 8_1:-18620137 Msa1183390:three_prime_UTR
TATAGCATTCCATTTCAAAT+TGG 0.213868 8_1:+18623633 None:intergenic
AGCTCCCATGTAGTCGAATT+TGG 0.237732 8_1:+18620910 None:intergenic
ATCCTACCATTATTCCTAAT+TGG 0.237984 8_1:-18621344 Msa1183390:CDS
CGACTTTATCATAATCCTTA+AGG 0.296327 8_1:+18621499 None:intergenic
TCGAAGTAATGAGGAGTAAA+AGG 0.304308 8_1:-18621572 Msa1183390:CDS
CATGGATGATAGTTTGGAAT+TGG 0.314030 8_1:-18620099 Msa1183390:three_prime_UTR
TTCTGAGGCGCTTTCGTGCT+TGG 0.317772 8_1:-18620854 Msa1183390:CDS
GTACTAAATGTACTCCAATT+AGG 0.322076 8_1:+18621330 None:intergenic
AAAGGGAAAGAGAAACGTTT+TGG 0.332422 8_1:+18623806 None:intergenic
GAAACCCAAGCCAATAAAAT+TGG 0.333547 8_1:-18620797 Msa1183390:CDS
AAAACATGATAGAGCTCTTC+AGG 0.338362 8_1:-18623479 Msa1183390:intron
TGTACTCCAATTAGGAATAA+TGG 0.340858 8_1:+18621338 None:intergenic
GATGATGGAGAATCCTGAAT+TGG 0.341809 8_1:-18623596 Msa1183390:CDS
CATTATCTCCTGAGTTTGTA+TGG 0.359485 8_1:-18621207 Msa1183390:CDS
GTGTTACATGGATGATAGTT+TGG 0.366350 8_1:-18620105 Msa1183390:three_prime_UTR
CTGCTTCTGTGTTGAATCAA+TGG 0.369186 8_1:-18623570 Msa1183390:CDS
AAGGCCGAGGGTAGAATATT+AGG 0.374501 8_1:-18621249 Msa1183390:CDS
CTTCGTCTTGACAAAGCTTA+AGG 0.376933 8_1:+18620767 None:intergenic
TTGAGATAGATAGATATGAT+AGG 0.378571 8_1:+18623938 None:intergenic
ACTGACAGTGGAATTGGAAT+TGG 0.384505 8_1:-18623733 Msa1183390:CDS
ATAGCATTCCATTTCAAATT+GGG 0.388781 8_1:+18623634 None:intergenic
ATTGAGTTGTTGAAGAAGTC+GGG 0.392725 8_1:-18620718 Msa1183390:CDS
TTGAAGATAATAATGATGTT+TGG 0.392985 8_1:+18623913 None:intergenic
TATTTCTTCTCTCGTAAGAA+TGG 0.397940 8_1:-18621094 Msa1183390:CDS
GGGTCATATTGCTGAAAATA+GGG 0.397978 8_1:-18620878 Msa1183390:CDS
ATATATATACATATAATATC+TGG 0.400262 8_1:-18621434 Msa1183390:CDS
AGGGTCATATTGCTGAAAAT+AGG 0.400702 8_1:-18620879 Msa1183390:CDS
CCCTCTGATGATTCTAGAAT+AGG 0.408766 8_1:-18621021 Msa1183390:CDS
AGAGAAAACCCAATTTGAAA+TGG 0.410586 8_1:-18623642 Msa1183390:CDS
CCGCATACGCTTCGTCGTTA+TGG 0.412804 8_1:+18620692 None:intergenic
AACTCTGCAAAGTTCCCATT+TGG 0.415800 8_1:+18623525 None:intergenic
CAGAAAAGCTTTACGAGGAA+TGG 0.415843 8_1:-18621056 Msa1183390:CDS
GTTTCCAAGTATACCTAACT+TGG 0.418407 8_1:-18621130 Msa1183390:CDS
CTAGGTTCTTATGCTAGGTT+AGG 0.424327 8_1:-18620240 Msa1183390:three_prime_UTR
AAGGAAGGAATCTCACCAAA+TGG 0.426265 8_1:-18623540 Msa1183390:CDS
CACATTGACCCTTTGTTTGA+AGG 0.426662 8_1:+18623762 None:intergenic
ACAGCATGGTATCCCAAGTT+AGG 0.429036 8_1:+18621117 None:intergenic
AAGAAGATTGAATTTGAAGA+GGG 0.436849 8_1:+18623836 None:intergenic
TTAAAAGACAAGAGAACATA+TGG 0.437458 8_1:-18621651 Msa1183390:CDS
AATTGAGTTGTTGAAGAAGT+CGG 0.440073 8_1:-18620719 Msa1183390:CDS
ATTCTTTCAATCCTGTTTGA+CGG 0.440996 8_1:+18620649 None:intergenic
GAAGAGTATGAGAATAAGAA+AGG 0.442055 8_1:+18623788 None:intergenic
GCACCTACATTTCAAATTGA+AGG 0.442101 8_1:-18620540 Msa1183390:three_prime_UTR
ACGAGGAATGGGTTTCTGTA+AGG 0.443573 8_1:-18621044 Msa1183390:CDS
GGAATTGGACCCTTAGTAGA+TGG 0.444776 8_1:-18620084 Msa1183390:three_prime_UTR
TGCTTCTGTGTTGAATCAAT+GGG 0.447177 8_1:-18623569 Msa1183390:CDS
ATTACATGTACCATCTACTA+AGG 0.448080 8_1:+18620074 None:intergenic
GCAAAGATGAACCGTCAAAC+AGG 0.449173 8_1:-18620660 Msa1183390:CDS
CGACAAGTGATTCAAAGAGT+TGG 0.450702 8_1:-18620819 Msa1183390:CDS
ATCTCAAAGATTCACAGTTA+TGG 0.451129 8_1:-18623679 Msa1183390:CDS
AGAGTCATCATTAAATTAAA+CGG 0.454778 8_1:+18621531 None:intergenic
ACACCTTCAATTTGAAATGT+AGG 0.457004 8_1:+18620537 None:intergenic
CGTAAGAATGGACGATATTG+AGG 0.465330 8_1:-18621082 Msa1183390:CDS
ATACAAGAGGATTTCGATGA+TGG 0.469256 8_1:-18623611 Msa1183390:CDS
AGAAAAGCTTTACGAGGAAT+GGG 0.471834 8_1:-18621055 Msa1183390:CDS
TCAAGGATCAATAGAGAAGA+TGG 0.473452 8_1:-18621394 Msa1183390:CDS
ACAGAAGCAGAACCCAATTC+AGG 0.475894 8_1:+18623583 None:intergenic
TATCCCAAGTTAGGTATACT+TGG 0.477102 8_1:+18621126 None:intergenic
GGCTGCAATGTATATTAAGA+TGG 0.477129 8_1:-18621304 Msa1183390:CDS
GCTTATCACAACAGTTATGA+AGG 0.477536 8_1:-18620264 Msa1183390:three_prime_UTR
AAATGAGTTGATAGAACATA+GGG 0.479486 8_1:-18620324 Msa1183390:three_prime_UTR
TGCAACAATGGTGAGGATAC+AGG 0.479883 8_1:+18620006 None:intergenic
GATCTAATCGCAAGAGTTCA+CGG 0.482500 8_1:-18621717 Msa1183390:CDS
GACTCTGTACATGAACCTTA+AGG 0.486004 8_1:-18621514 Msa1183390:CDS
ATGATGGAGAATCCTGAATT+GGG 0.490611 8_1:-18623595 Msa1183390:CDS
AATATCTGGTTGTCCTCTTG+TGG 0.497939 8_1:-18621420 Msa1183390:CDS
ATAAGCTGGTATCTTAAGAA+AGG 0.498356 8_1:-18620988 Msa1183390:CDS
TTATGATAAAGTCGATATGT+TGG 0.499930 8_1:-18621490 Msa1183390:CDS
GCAGATATTCTAAACCTCTC+TGG 0.506381 8_1:+18621762 None:intergenic
TTGTCCTCTTGTGGATCTCA+AGG 0.509360 8_1:-18621411 Msa1183390:CDS
ACATTGACCCTTTGTTTGAA+GGG 0.509737 8_1:+18623763 None:intergenic
TTGAAATGTAGGTGCTACAT+AGG 0.513572 8_1:+18620548 None:intergenic
TAGGAAACCTTCTCATAAGC+TGG 0.515507 8_1:-18621002 Msa1183390:CDS
AAGGGCTAGGTTCTTATGCT+AGG 0.518513 8_1:-18620245 Msa1183390:three_prime_UTR
CACGGAGTTTCTAGTGCAGA+AGG 0.519926 8_1:-18621699 Msa1183390:CDS
CTTCTGATGCATGTGATATG+AGG 0.519967 8_1:-18620181 Msa1183390:three_prime_UTR
AAAATGAGTTGATAGAACAT+AGG 0.525388 8_1:-18620325 Msa1183390:three_prime_UTR
ATCAAAAGCTACTATCTACT+TGG 0.530755 8_1:+18620572 None:intergenic
AAGAGTATGAGAATAAGAAA+GGG 0.530885 8_1:+18623789 None:intergenic
GACAGTGGAATTGGAATTGG+AGG 0.533917 8_1:-18623730 Msa1183390:CDS
TACATGGGAGCTTCTTTCTG+AGG 0.536998 8_1:-18620899 Msa1183390:CDS
GATGTCCAAATTCGACTACA+TGG 0.539568 8_1:-18620915 Msa1183390:CDS
CAACACTTCCATACAAACTC+AGG 0.539796 8_1:+18621199 None:intergenic
CTGAGTTTGTATGGAAGTGT+TGG 0.541520 8_1:-18621198 Msa1183390:CDS
TTATCTTCAACAAACAACAT+TGG 0.542696 8_1:-18623900 Msa1183390:CDS
CACAACAGTTATGAAGGGCT+AGG 0.546648 8_1:-18620258 Msa1183390:three_prime_UTR
AGGAAGGAATCTCACCAAAT+GGG 0.547368 8_1:-18623539 Msa1183390:CDS
AGATATGATAGGGTCCACTT+TGG 0.549000 8_1:+18623949 None:intergenic
TTCTTTAAGCATATGAGTGA+AGG 0.550405 8_1:-18620943 Msa1183390:CDS
TGCTGAAAATAGGGTTTCTG+AGG 0.551041 8_1:-18620869 Msa1183390:CDS
CATTGACCCTTTGTTTGAAG+GGG 0.551949 8_1:+18623764 None:intergenic
AGGACGAAGTTTACCGCGTG+TGG 0.552160 8_1:-18621170 Msa1183390:CDS
TGAGATAGATAGATATGATA+GGG 0.552822 8_1:+18623939 None:intergenic
GTAAGAATGGACGATATTGA+GGG 0.554710 8_1:-18621081 Msa1183390:CDS
GTATGGAAGTGTTGGAAACA+AGG 0.554809 8_1:-18621190 Msa1183390:CDS
ATGGTACATGTAATATATCT+AGG 0.558739 8_1:-18620065 Msa1183390:three_prime_UTR
ATCAATGGGAGAATGAAGGA+AGG 0.564566 8_1:-18623555 Msa1183390:CDS
AAACTCAGGAGATAATGAAA+AGG 0.565979 8_1:+18621213 None:intergenic
TCGACCTAATATTCTACCCT+CGG 0.566861 8_1:+18621245 None:intergenic
AAAGAAGATTGAATTTGAAG+AGG 0.567795 8_1:+18623835 None:intergenic
AATCTTTACTCGAAGTAATG+AGG 0.567840 8_1:-18621581 Msa1183390:CDS
TCATTCTAGATCAAGAGAAA+AGG 0.571003 8_1:-18621607 Msa1183390:CDS
CAACAACTCAATTAAAACCT+CGG 0.574815 8_1:+18620729 None:intergenic
TGGAATGAAGTAGTGTTACA+TGG 0.574834 8_1:-18620117 Msa1183390:three_prime_UTR
TGTTGGTGTAATGTCAATGT+TGG 0.575257 8_1:+18620490 None:intergenic
TAAGATACCAGCTTATGAGA+AGG 0.579937 8_1:+18620995 None:intergenic
TTGGAGTACATTTAGTACAA+TGG 0.583230 8_1:-18621325 Msa1183390:CDS
TTTCCAAGTATACCTAACTT+GGG 0.589423 8_1:-18621129 Msa1183390:CDS
TTTAAGCATATGAGTGAAGG+TGG 0.593303 8_1:-18620940 Msa1183390:CDS
TTGTCAAGACGAAGACGACA+TGG 0.595912 8_1:-18620758 Msa1183390:CDS
TAGTGAATCTGCATCCAAAG+TGG 0.597601 8_1:-18623963 Msa1183390:CDS
ACATGGGAGCTTCTTTCTGA+GGG 0.601564 8_1:-18620898 Msa1183390:CDS
AATGAACATATGCATTCAAG+AGG 0.604245 8_1:+18621625 None:intergenic
GGATACAGGAAAAGAAGCCA+AGG 0.612454 8_1:+18620020 None:intergenic
TTGAATGTAATAACATGTGT+TGG 0.617877 8_1:+18620473 None:intergenic
TCCTATTCTAGAATCATCAG+AGG 0.618071 8_1:+18621020 None:intergenic
ATAGAAAACATACACAAGGA+TGG 0.618846 8_1:+18620158 None:intergenic
CTTATCACAACAGTTATGAA+GGG 0.620148 8_1:-18620263 Msa1183390:three_prime_UTR
TTACATGTACCATCTACTAA+GGG 0.620492 8_1:+18620075 None:intergenic
ATTGACCCTTTGTTTGAAGG+GGG 0.620972 8_1:+18623765 None:intergenic
TTGAATCAATGGGAGAATGA+AGG 0.623335 8_1:-18623559 Msa1183390:CDS
AATGGAATGCTATATACAAG+AGG 0.631419 8_1:-18623624 Msa1183390:CDS
TCTTATGCTAGGTTAGGACA+TGG 0.635402 8_1:-18620234 Msa1183390:three_prime_UTR
ATGAGTTGATAGAACATAGG+GGG 0.638934 8_1:-18620322 Msa1183390:three_prime_UTR
AGAAGATTGAATTTGAAGAG+GGG 0.639018 8_1:+18623837 None:intergenic
TTGACCCTTTGTTTGAAGGG+GGG 0.640200 8_1:+18623766 None:intergenic
CCTATTCTAGAATCATCAGA+GGG 0.647606 8_1:+18621021 None:intergenic
CATTTCAAATTGAAGGTGTG+TGG 0.651483 8_1:-18620533 Msa1183390:three_prime_UTR
ATGAACATATGCATTCAAGA+GGG 0.654487 8_1:+18621626 None:intergenic
AAGCATATGAGTGAAGGTGG+TGG 0.657423 8_1:-18620937 Msa1183390:CDS
GTGTGGTGTCTAACATGTGT+CGG 0.664995 8_1:-18620516 Msa1183390:three_prime_UTR
ATGTCCAAATTCGACTACAT+GGG 0.669288 8_1:-18620914 Msa1183390:CDS
TGATCCTTGAGATCCACAAG+AGG 0.674298 8_1:+18621407 None:intergenic
CGAGAGAAGAAATAACAGCA+TGG 0.674858 8_1:+18621103 None:intergenic
CTCCAATTAGGAATAATGGT+AGG 0.679561 8_1:+18621342 None:intergenic
TAAGAATGGACGATATTGAG+GGG 0.688947 8_1:-18621080 Msa1183390:CDS
AAGAATGGACGATATTGAGG+GGG 0.691386 8_1:-18621079 Msa1183390:CDS
ATTTATAGTTATTCCACACG+CGG 0.697764 8_1:+18621157 None:intergenic
AATGAGTTGATAGAACATAG+GGG 0.698896 8_1:-18620323 Msa1183390:three_prime_UTR
AGACGACATGGAGAGCGCCG+AGG 0.711199 8_1:-18620746 Msa1183390:CDS
AGTCATAGAAAACATACACA+AGG 0.711577 8_1:+18620154 None:intergenic
GGATGAACAATAGACCAGAG+AGG 0.722678 8_1:-18621776 Msa1183390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATACATATAATATC+TGG - chr8_1:18622564-18622583 Msa1183390:intron 10.0%
!! TCATTATATGTTATTCTATA+TGG - chr8_1:18620558-18620577 Msa1183390:exon 15.0%
!! AAACAAAAAATATGATTGAA+AGG + chr8_1:18621521-18621540 None:intergenic 15.0%
!! AAAAAATTTATATCAGTTTG+AGG + chr8_1:18621775-18621794 None:intergenic 15.0%
!! TTGAAGATAATAATGATGTT+TGG + chr8_1:18620088-18620107 None:intergenic 20.0%
!!! AAGAATTGTGTTTTTTAATC+AGG + chr8_1:18621121-18621140 None:intergenic 20.0%
!!! TAGAATTCTTGTTTATTTTC+CGG + chr8_1:18621176-18621195 None:intergenic 20.0%
!! CAACACACAAAAAAAAAAAA+AGG - chr8_1:18621337-18621356 Msa1183390:CDS 20.0%
!! TTTGGAGATAGAAATTATTA+AGG + chr8_1:18621493-18621512 None:intergenic 20.0%
!!! GTTAAAGGTTTTTGATTTTT+TGG + chr8_1:18621576-18621595 None:intergenic 20.0%
!! GTAGTAAAAGAAATACATAA+CGG - chr8_1:18621742-18621761 Msa1183390:CDS 20.0%
!!! GGAAATTTTCAATATATTCA+GGG + chr8_1:18621914-18621933 None:intergenic 20.0%
!!! AGGAAATTTTCAATATATTC+AGG + chr8_1:18621915-18621934 None:intergenic 20.0%
!! TGATATTAAGACATTATTTG+AGG + chr8_1:18622144-18622163 None:intergenic 20.0%
!! AGAGTCATCATTAAATTAAA+CGG + chr8_1:18622470-18622489 None:intergenic 20.0%
! TGAGATAGATAGATATGATA+GGG + chr8_1:18620062-18620081 None:intergenic 25.0%
! TTGAGATAGATAGATATGAT+AGG + chr8_1:18620063-18620082 None:intergenic 25.0%
! TTATCTTCAACAAACAACAT+TGG - chr8_1:18620098-18620117 Msa1183390:three_prime_UTR 25.0%
! AAGAAGATTGAATTTGAAGA+GGG + chr8_1:18620165-18620184 None:intergenic 25.0%
! AAAGAAGATTGAATTTGAAG+AGG + chr8_1:18620166-18620185 None:intergenic 25.0%
!! AAGAGTATGAGAATAAGAAA+GGG + chr8_1:18620212-18620231 None:intergenic 25.0%
! ATAGCATTCCATTTCAAATT+GGG + chr8_1:18620367-18620386 None:intergenic 25.0%
! TATAGCATTCCATTTCAAAT+TGG + chr8_1:18620368-18620387 None:intergenic 25.0%
!!! TGTGTTTTTTAATCAGGAAA+TGG + chr8_1:18621115-18621134 None:intergenic 25.0%
!!! AGAATTCTTGTTTATTTTCC+GGG + chr8_1:18621175-18621194 None:intergenic 25.0%
! TTAAGTTTAAATGTCTCTGT+TGG + chr8_1:18621244-18621263 None:intergenic 25.0%
! AAATCATAATGTATCATGAG+AGG + chr8_1:18621404-18621423 None:intergenic 25.0%
!! TATGATTGAAAGGTATGATT+TGG + chr8_1:18621511-18621530 None:intergenic 25.0%
! TTAAAACTTGTAGTGGTTAA+AGG + chr8_1:18621591-18621610 None:intergenic 25.0%
!! ACACAATTTAAAACTTGTAG+TGG + chr8_1:18621598-18621617 None:intergenic 25.0%
!! ACTGACCAATACAATTTTTA+GGG + chr8_1:18621648-18621667 None:intergenic 25.0%
!! ATTTCTTTTACTACGTTTCT+TGG + chr8_1:18621736-18621755 None:intergenic 25.0%
!! TAAAAGAAATACATAACGGA+CGG - chr8_1:18621746-18621765 Msa1183390:CDS 25.0%
!! ACACCAACGTTAAAATTTTA+TGG - chr8_1:18621824-18621843 Msa1183390:intron 25.0%
!! CACCAACGTTAAAATTTTAT+GGG - chr8_1:18621825-18621844 Msa1183390:intron 25.0%
!! ACCAACGTTAAAATTTTATG+GGG - chr8_1:18621826-18621845 Msa1183390:intron 25.0%
!!! TTTTTTTTTACCAACAGTCT+AGG + chr8_1:18621935-18621954 None:intergenic 25.0%
! TACTTTCAAAAAATCATTCG+TGG + chr8_1:18622168-18622187 None:intergenic 25.0%
!!! TGTCTTTTAAATCATTGGTT+AGG + chr8_1:18622337-18622356 None:intergenic 25.0%
!! TCTCTTGTCTTTTAAATCAT+TGG + chr8_1:18622342-18622361 None:intergenic 25.0%
! TTAAAAGACAAGAGAACATA+TGG - chr8_1:18622347-18622366 Msa1183390:intron 25.0%
! TTATGATAAAGTCGATATGT+TGG - chr8_1:18622508-18622527 Msa1183390:intron 25.0%
! TTGAATGTAATAACATGTGT+TGG + chr8_1:18623528-18623547 None:intergenic 25.0%
!!! TCAAATTTTGTTTTGACTTG+CGG - chr8_1:18623650-18623669 Msa1183390:CDS 25.0%
!!! AAAATGAGTTGATAGAACAT+AGG - chr8_1:18623673-18623692 Msa1183390:CDS 25.0%
!!! AAATGAGTTGATAGAACATA+GGG - chr8_1:18623674-18623693 Msa1183390:CDS 25.0%
!! TTCTTTTTCTCAAGCTTTTA+TGG - chr8_1:18623712-18623731 Msa1183390:CDS 25.0%
!! ATGACTTGTGTCTTTAAATT+TGG - chr8_1:18623861-18623880 Msa1183390:CDS 25.0%
! ATGGTACATGTAATATATCT+AGG - chr8_1:18623933-18623952 Msa1183390:CDS 25.0%
AGAAGATTGAATTTGAAGAG+GGG + chr8_1:18620164-18620183 None:intergenic 30.0%
! GAAGAGTATGAGAATAAGAA+AGG + chr8_1:18620213-18620232 None:intergenic 30.0%
ATCTCAAAGATTCACAGTTA+TGG - chr8_1:18620319-18620338 Msa1183390:three_prime_UTR 30.0%
AGAGAAAACCCAATTTGAAA+TGG - chr8_1:18620356-18620375 Msa1183390:three_prime_UTR 30.0%
AATGGAATGCTATATACAAG+AGG - chr8_1:18620374-18620393 Msa1183390:three_prime_UTR 30.0%
TTGCTTCATAATGTTAAGGA+GGG + chr8_1:18620708-18620727 None:intergenic 30.0%
GTTCAATTCAATCTGTTGTT+CGG + chr8_1:18620745-18620764 None:intergenic 30.0%
TCCAAAAGAGTAAGAATGAA+CGG - chr8_1:18620765-18620784 Msa1183390:CDS 30.0%
!! GAATTCTTGTTTATTTTCCG+GGG + chr8_1:18621174-18621193 None:intergenic 30.0%
CTAGAAGACATTAATGCAAT+AGG - chr8_1:18621193-18621212 Msa1183390:CDS 30.0%
AATATATTCAGCTGCACAAT+TGG + chr8_1:18621291-18621310 None:intergenic 30.0%
!!! TTTTTTTGTGTGTTGCTGAT+TGG + chr8_1:18621332-18621351 None:intergenic 30.0%
AATTGTGATAGCTAAAGTGT+CGG + chr8_1:18621463-18621482 None:intergenic 30.0%
ATCCACCCTAAAAATTGTAT+TGG - chr8_1:18621640-18621659 Msa1183390:CDS 30.0%
! CACTGACCAATACAATTTTT+AGG + chr8_1:18621649-18621668 None:intergenic 30.0%
! CTAAAAATTGTATTGGTCAG+TGG - chr8_1:18621647-18621666 Msa1183390:CDS 30.0%
TTGGATTTCATAGATGACTA+AGG + chr8_1:18621717-18621736 None:intergenic 30.0%
TTGAAAATTTCCTAGACTGT+TGG - chr8_1:18621922-18621941 Msa1183390:intron 30.0%
ACATGTGGATAGTATAAGAA+TGG + chr8_1:18621979-18621998 None:intergenic 30.0%
TTCCGTTTAGTAGAATCATA+GGG + chr8_1:18622056-18622075 None:intergenic 30.0%
ATTCCGTTTAGTAGAATCAT+AGG + chr8_1:18622057-18622076 None:intergenic 30.0%
! TTAAGACATTATTTGAGGCA+AGG + chr8_1:18622139-18622158 None:intergenic 30.0%
! ATGTTTTGCAGGTATATGAT+TGG - chr8_1:18622201-18622220 Msa1183390:intron 30.0%
ATGAACATATGCATTCAAGA+GGG + chr8_1:18622375-18622394 None:intergenic 30.0%
AATGAACATATGCATTCAAG+AGG + chr8_1:18622376-18622395 None:intergenic 30.0%
TCATTCTAGATCAAGAGAAA+AGG - chr8_1:18622391-18622410 Msa1183390:intron 30.0%
AATCTTTACTCGAAGTAATG+AGG - chr8_1:18622417-18622436 Msa1183390:intron 30.0%
CGACTTTATCATAATCCTTA+AGG + chr8_1:18622502-18622521 None:intergenic 30.0%
! AGTTTTTGAACAGATGTCAA+AGG - chr8_1:18622631-18622650 Msa1183390:intron 30.0%
ATCCTACCATTATTCCTAAT+TGG - chr8_1:18622654-18622673 Msa1183390:intron 30.0%
TGTACTCCAATTAGGAATAA+TGG + chr8_1:18622663-18622682 None:intergenic 30.0%
GTACTAAATGTACTCCAATT+AGG + chr8_1:18622671-18622690 None:intergenic 30.0%
TTGGAGTACATTTAGTACAA+TGG - chr8_1:18622673-18622692 Msa1183390:intron 30.0%
AAACTCAGGAGATAATGAAA+AGG + chr8_1:18622788-18622807 None:intergenic 30.0%
ATTTATAGTTATTCCACACG+CGG + chr8_1:18622844-18622863 None:intergenic 30.0%
TTTCCAAGTATACCTAACTT+GGG - chr8_1:18622869-18622888 Msa1183390:intron 30.0%
TATTTCTTCTCTCGTAAGAA+TGG - chr8_1:18622904-18622923 Msa1183390:intron 30.0%
ATAAGCTGGTATCTTAAGAA+AGG - chr8_1:18623010-18623029 Msa1183390:intron 30.0%
TTCTTTAAGCATATGAGTGA+AGG - chr8_1:18623055-18623074 Msa1183390:intron 30.0%
CAACAACTCAATTAAAACCT+CGG + chr8_1:18623272-18623291 None:intergenic 30.0%
! AATTGAGTTGTTGAAGAAGT+CGG - chr8_1:18623279-18623298 Msa1183390:intron 30.0%
ATTCTTTCAATCCTGTTTGA+CGG + chr8_1:18623352-18623371 None:intergenic 30.0%
ATCAAAAGCTACTATCTACT+TGG + chr8_1:18623429-18623448 None:intergenic 30.0%
! ACACCTTCAATTTGAAATGT+AGG + chr8_1:18623464-18623483 None:intergenic 30.0%
!! AATGAGTTGATAGAACATAG+GGG - chr8_1:18623675-18623694 Msa1183390:CDS 30.0%
CTTATCACAACAGTTATGAA+GGG - chr8_1:18623735-18623754 Msa1183390:CDS 30.0%
ATAGAAAACATACACAAGGA+TGG + chr8_1:18623843-18623862 None:intergenic 30.0%
AGTCATAGAAAACATACACA+AGG + chr8_1:18623847-18623866 None:intergenic 30.0%
TTACATGTACCATCTACTAA+GGG + chr8_1:18623926-18623945 None:intergenic 30.0%
ATTACATGTACCATCTACTA+AGG + chr8_1:18623927-18623946 None:intergenic 30.0%
! AAAGGGAAAGAGAAACGTTT+TGG + chr8_1:18620195-18620214 None:intergenic 35.0%
! ACATTGACCCTTTGTTTGAA+GGG + chr8_1:18620238-18620257 None:intergenic 35.0%
! AATGTGTTTTACACTGACAG+TGG - chr8_1:18620253-18620272 Msa1183390:three_prime_UTR 35.0%
! TTTTACACTGACAGTGGAAT+TGG - chr8_1:18620259-18620278 Msa1183390:three_prime_UTR 35.0%
ATACAAGAGGATTTCGATGA+TGG - chr8_1:18620387-18620406 Msa1183390:three_prime_UTR 35.0%
! ATGATGGAGAATCCTGAATT+GGG - chr8_1:18620403-18620422 Msa1183390:three_prime_UTR 35.0%
TGCTTCTGTGTTGAATCAAT+GGG - chr8_1:18620429-18620448 Msa1183390:three_prime_UTR 35.0%
TTGAATCAATGGGAGAATGA+AGG - chr8_1:18620439-18620458 Msa1183390:three_prime_UTR 35.0%
AAAACATGATAGAGCTCTTC+AGG - chr8_1:18620519-18620538 Msa1183390:three_prime_UTR 35.0%
ATGGTTAAAACAACTGCAGT+AGG - chr8_1:18620577-18620596 Msa1183390:CDS 35.0%
!!! CCTAGCTTTTTTGGTTTTTG+CGG - chr8_1:18620600-18620619 Msa1183390:CDS 35.0%
!!! TGCTAGTTTTCGCTGTTTTA+GGG - chr8_1:18620660-18620679 Msa1183390:CDS 35.0%
TGCTTCATAATGTTAAGGAG+GGG + chr8_1:18620707-18620726 None:intergenic 35.0%
GTTGCTTCATAATGTTAAGG+AGG + chr8_1:18620709-18620728 None:intergenic 35.0%
! GCTGTTGCTTCATAATGTTA+AGG + chr8_1:18620712-18620731 None:intergenic 35.0%
! ACCGTTCATTCTTACTCTTT+TGG + chr8_1:18620769-18620788 None:intergenic 35.0%
! TAACATGGTAGTGTATTGGA+TGG + chr8_1:18620797-18620816 None:intergenic 35.0%
TCTTTGGTACGATAGAGATT+GGG + chr8_1:18620851-18620870 None:intergenic 35.0%
TGTTGGACCATTCCATAATA+CGG - chr8_1:18620880-18620899 Msa1183390:CDS 35.0%
TTGGTCATGATATAGTTCTC+AGG + chr8_1:18621147-18621166 None:intergenic 35.0%
TTGCCAAATAGATGACACTT+TGG - chr8_1:18621422-18621441 Msa1183390:CDS 35.0%
! TAGCCAAAGTGTCATCTATT+TGG + chr8_1:18621428-18621447 None:intergenic 35.0%
TTTGGACACAGATTGAACAA+TGG + chr8_1:18621558-18621577 None:intergenic 35.0%
!! GACCAATACAATTTTTAGGG+TGG + chr8_1:18621645-18621664 None:intergenic 35.0%
!! GCCCCATAAAATTTTAACGT+TGG + chr8_1:18621830-18621849 None:intergenic 35.0%
! ACGTTAAAATTTTATGGGGC+CGG - chr8_1:18621830-18621849 Msa1183390:intron 35.0%
TTACTGACAGTTTGCAAATC+TGG + chr8_1:18622007-18622026 None:intergenic 35.0%
TAGTAGAATCATAGGGGAAA+TGG + chr8_1:18622049-18622068 None:intergenic 35.0%
TCCCCTATGATTCTACTAAA+CGG - chr8_1:18622051-18622070 Msa1183390:intron 35.0%
TCCGTTTAGTAGAATCATAG+GGG + chr8_1:18622055-18622074 None:intergenic 35.0%
CATACTTTCATGCATTCCAA+AGG + chr8_1:18622084-18622103 None:intergenic 35.0%
! GACTAATGAACATGTTTTGC+AGG - chr8_1:18622190-18622209 Msa1183390:intron 35.0%
TCGAAGTAATGAGGAGTAAA+AGG - chr8_1:18622426-18622445 Msa1183390:intron 35.0%
TCAAGGATCAATAGAGAAGA+TGG - chr8_1:18622604-18622623 Msa1183390:intron 35.0%
CTCCAATTAGGAATAATGGT+AGG + chr8_1:18622659-18622678 None:intergenic 35.0%
GGCTGCAATGTATATTAAGA+TGG - chr8_1:18622694-18622713 Msa1183390:intron 35.0%
!! AGCACAAGAGTGCTTAAAAA+AGG - chr8_1:18622730-18622749 Msa1183390:intron 35.0%
CATTATCTCCTGAGTTTGTA+TGG - chr8_1:18622791-18622810 Msa1183390:intron 35.0%
GTTTCCAAGTATACCTAACT+TGG - chr8_1:18622868-18622887 Msa1183390:intron 35.0%
TATCCCAAGTTAGGTATACT+TGG + chr8_1:18622875-18622894 None:intergenic 35.0%
GTAAGAATGGACGATATTGA+GGG - chr8_1:18622917-18622936 Msa1183390:intron 35.0%
TAAGAATGGACGATATTGAG+GGG - chr8_1:18622918-18622937 Msa1183390:intron 35.0%
AGAAAAGCTTTACGAGGAAT+GGG - chr8_1:18622943-18622962 Msa1183390:intron 35.0%
!! CCTATTCTAGAATCATCAGA+GGG + chr8_1:18622980-18622999 None:intergenic 35.0%
!! TCCTATTCTAGAATCATCAG+AGG + chr8_1:18622981-18623000 None:intergenic 35.0%
TAAGATACCAGCTTATGAGA+AGG + chr8_1:18623006-18623025 None:intergenic 35.0%
TTTAAGCATATGAGTGAAGG+TGG - chr8_1:18623058-18623077 Msa1183390:intron 35.0%
ATGTCCAAATTCGACTACAT+GGG - chr8_1:18623084-18623103 Msa1183390:intron 35.0%
AGGGTCATATTGCTGAAAAT+AGG - chr8_1:18623119-18623138 Msa1183390:intron 35.0%
GGGTCATATTGCTGAAAATA+GGG - chr8_1:18623120-18623139 Msa1183390:intron 35.0%
GAAACCCAAGCCAATAAAAT+TGG - chr8_1:18623201-18623220 Msa1183390:intron 35.0%
! AGGAATGCAGCCAATTTTAT+TGG + chr8_1:18623214-18623233 None:intergenic 35.0%
! ATTGAGTTGTTGAAGAAGTC+GGG - chr8_1:18623280-18623299 Msa1183390:intron 35.0%
! TTGAAATGTAGGTGCTACAT+AGG + chr8_1:18623453-18623472 None:intergenic 35.0%
GCACCTACATTTCAAATTGA+AGG - chr8_1:18623458-18623477 Msa1183390:intron 35.0%
! CATTTCAAATTGAAGGTGTG+TGG - chr8_1:18623465-18623484 Msa1183390:intron 35.0%
TGTTGGTGTAATGTCAATGT+TGG + chr8_1:18623511-18623530 None:intergenic 35.0%
!! ATGAGTTGATAGAACATAGG+GGG - chr8_1:18623676-18623695 Msa1183390:CDS 35.0%
GCTTATCACAACAGTTATGA+AGG - chr8_1:18623734-18623753 Msa1183390:CDS 35.0%
! GACTGATGTTTTGCTCTAAT+AGG - chr8_1:18623786-18623805 Msa1183390:CDS 35.0%
TGGAATGAAGTAGTGTTACA+TGG - chr8_1:18623881-18623900 Msa1183390:CDS 35.0%
GTGTTACATGGATGATAGTT+TGG - chr8_1:18623893-18623912 Msa1183390:CDS 35.0%
! CATGGATGATAGTTTGGAAT+TGG - chr8_1:18623899-18623918 Msa1183390:CDS 35.0%
TAGTGAATCTGCATCCAAAG+TGG - chr8_1:18620035-18620054 Msa1183390:three_prime_UTR 40.0%
AGATATGATAGGGTCCACTT+TGG + chr8_1:18620052-18620071 None:intergenic 40.0%
! ATTGACCCTTTGTTTGAAGG+GGG + chr8_1:18620236-18620255 None:intergenic 40.0%
! CATTGACCCTTTGTTTGAAG+GGG + chr8_1:18620237-18620256 None:intergenic 40.0%
! CACATTGACCCTTTGTTTGA+AGG + chr8_1:18620239-18620258 None:intergenic 40.0%
ACTGACAGTGGAATTGGAAT+TGG - chr8_1:18620265-18620284 Msa1183390:three_prime_UTR 40.0%
!! GATGATGGAGAATCCTGAAT+TGG - chr8_1:18620402-18620421 Msa1183390:three_prime_UTR 40.0%
CTGCTTCTGTGTTGAATCAA+TGG - chr8_1:18620428-18620447 Msa1183390:three_prime_UTR 40.0%
ATCAATGGGAGAATGAAGGA+AGG - chr8_1:18620443-18620462 Msa1183390:three_prime_UTR 40.0%
AAGGAAGGAATCTCACCAAA+TGG - chr8_1:18620458-18620477 Msa1183390:three_prime_UTR 40.0%
AGGAAGGAATCTCACCAAAT+GGG - chr8_1:18620459-18620478 Msa1183390:three_prime_UTR 40.0%
AACTCTGCAAAGTTCCCATT+TGG + chr8_1:18620476-18620495 None:intergenic 40.0%
CCGCAAAAACCAAAAAAGCT+AGG + chr8_1:18620603-18620622 None:intergenic 40.0%
!!! CTGCTAGTTTTCGCTGTTTT+AGG - chr8_1:18620659-18620678 Msa1183390:CDS 40.0%
!!! GCTAGTTTTCGCTGTTTTAG+GGG - chr8_1:18620661-18620680 Msa1183390:CDS 40.0%
!! GAGGGGGTATGTTTTTAACA+CGG + chr8_1:18620690-18620709 None:intergenic 40.0%
GCTTCATAATGTTAAGGAGG+GGG + chr8_1:18620706-18620725 None:intergenic 40.0%
! AGGCTAACATGGTAGTGTAT+TGG + chr8_1:18620801-18620820 None:intergenic 40.0%
GTCTTTGGTACGATAGAGAT+TGG + chr8_1:18620852-18620871 None:intergenic 40.0%
TCACCATCCGTATTATGGAA+TGG + chr8_1:18620890-18620909 None:intergenic 40.0%
GATGATCACCATCCGTATTA+TGG + chr8_1:18620895-18620914 None:intergenic 40.0%
! TCTATTTTCAGCAGGACAAC+AGG + chr8_1:18621037-18621056 None:intergenic 40.0%
! GTTTTTACTTTGGCTGATGG+AGG + chr8_1:18621084-18621103 None:intergenic 40.0%
!!! CCTGTTTTTACTTTGGCTGA+TGG + chr8_1:18621087-18621106 None:intergenic 40.0%
CCATCAGCCAAAGTAAAAAC+AGG - chr8_1:18621084-18621103 Msa1183390:CDS 40.0%
!!! GGTTGCTCCTGTTTTTACTT+TGG + chr8_1:18621094-18621113 None:intergenic 40.0%
ATATCATGACCAAACTACCC+CGG - chr8_1:18621154-18621173 Msa1183390:CDS 40.0%
!! GTTTATTTTCCGGGGTAGTT+TGG + chr8_1:18621166-18621185 None:intergenic 40.0%
! TTAACAGCTTTTGCAGTGAC+TGG - chr8_1:18621260-18621279 Msa1183390:CDS 40.0%
! TAGGGTGGATTTCATAGTCT+TGG + chr8_1:18621630-18621649 None:intergenic 40.0%
TTAACGTTGGTGTGAGAACA+TGG + chr8_1:18621817-18621836 None:intergenic 40.0%
TACCACGTCAAAAGTTTAGC+CGG + chr8_1:18621852-18621871 None:intergenic 40.0%
! GCAAATCTGGAATTGACATG+TGG + chr8_1:18621994-18622013 None:intergenic 40.0%
ACTAAACGGAATGCTTCCTT+TGG - chr8_1:18622065-18622084 Msa1183390:intron 40.0%
GCAGATATTCTAAACCTCTC+TGG + chr8_1:18622239-18622258 None:intergenic 40.0%
GATCTAATCGCAAGAGTTCA+CGG - chr8_1:18622281-18622300 Msa1183390:intron 40.0%
GACTCTGTACATGAACCTTA+AGG - chr8_1:18622484-18622503 Msa1183390:intron 40.0%
AATATCTGGTTGTCCTCTTG+TGG - chr8_1:18622578-18622597 Msa1183390:intron 40.0%
TCGACCTAATATTCTACCCT+CGG + chr8_1:18622756-18622775 None:intergenic 40.0%
CAACACTTCCATACAAACTC+AGG + chr8_1:18622802-18622821 None:intergenic 40.0%
! CTGAGTTTGTATGGAAGTGT+TGG - chr8_1:18622800-18622819 Msa1183390:intron 40.0%
!! GTATGGAAGTGTTGGAAACA+AGG - chr8_1:18622808-18622827 Msa1183390:intron 40.0%
CGAGAGAAGAAATAACAGCA+TGG + chr8_1:18622898-18622917 None:intergenic 40.0%
CGTAAGAATGGACGATATTG+AGG - chr8_1:18622916-18622935 Msa1183390:intron 40.0%
AAGAATGGACGATATTGAGG+GGG - chr8_1:18622919-18622938 Msa1183390:intron 40.0%
CAGAAAAGCTTTACGAGGAA+TGG - chr8_1:18622942-18622961 Msa1183390:intron 40.0%
!! CCCTCTGATGATTCTAGAAT+AGG - chr8_1:18622977-18622996 Msa1183390:intron 40.0%
TAGGAAACCTTCTCATAAGC+TGG - chr8_1:18622996-18623015 Msa1183390:intron 40.0%
GATGTCCAAATTCGACTACA+TGG - chr8_1:18623083-18623102 Msa1183390:intron 40.0%
TGCTGAAAATAGGGTTTCTG+AGG - chr8_1:18623129-18623148 Msa1183390:intron 40.0%
CGACAAGTGATTCAAAGAGT+TGG - chr8_1:18623179-18623198 Msa1183390:intron 40.0%
!!! GCAGCCAATTTTATTGGCTT+GGG + chr8_1:18623208-18623227 None:intergenic 40.0%
!! TGCAGCCAATTTTATTGGCT+TGG + chr8_1:18623209-18623228 None:intergenic 40.0%
CTTCGTCTTGACAAAGCTTA+AGG + chr8_1:18623234-18623253 None:intergenic 40.0%
CTAGGTTCTTATGCTAGGTT+AGG - chr8_1:18623758-18623777 Msa1183390:CDS 40.0%
TCTTATGCTAGGTTAGGACA+TGG - chr8_1:18623764-18623783 Msa1183390:CDS 40.0%
CTTCTGATGCATGTGATATG+AGG - chr8_1:18623817-18623836 Msa1183390:CDS 40.0%
TCTTCCCCCCTTCAAACAAA+GGG - chr8_1:18620228-18620247 Msa1183390:three_prime_UTR 45.0%
! TTGACCCTTTGTTTGAAGGG+GGG + chr8_1:18620235-18620254 None:intergenic 45.0%
GACAGTGGAATTGGAATTGG+AGG - chr8_1:18620268-18620287 Msa1183390:three_prime_UTR 45.0%
ACAGAAGCAGAACCCAATTC+AGG + chr8_1:18620418-18620437 None:intergenic 45.0%
!!! TGCAGTAGGCCTAGCTTTTT+TGG - chr8_1:18620591-18620610 Msa1183390:CDS 45.0%
!!! TTGGTTTTTGCGGTGCTGTT+TGG - chr8_1:18620610-18620629 Msa1183390:CDS 45.0%
CATCTACAGTGAGGCTAACA+TGG + chr8_1:18620812-18620831 None:intergenic 45.0%
CGTAGTTCACATCTACAGTG+AGG + chr8_1:18620821-18620840 None:intergenic 45.0%
TTGGTACGATAGAGATTGGG+AGG + chr8_1:18620848-18620867 None:intergenic 45.0%
ATGGAATGGTCCAACAACAG+TGG + chr8_1:18620876-18620895 None:intergenic 45.0%
GGACCATTCCATAATACGGA+TGG - chr8_1:18620884-18620903 Msa1183390:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr8_1:18620932-18620951 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr8_1:18620933-18620952 None:intergenic 45.0%
! GGAGGGATTCTATTTTCAGC+AGG + chr8_1:18621045-18621064 None:intergenic 45.0%
GGATGAACAATAGACCAGAG+AGG - chr8_1:18622222-18622241 Msa1183390:intron 45.0%
TTGTCCTCTTGTGGATCTCA+AGG - chr8_1:18622587-18622606 Msa1183390:intron 45.0%
TGATCCTTGAGATCCACAAG+AGG + chr8_1:18622594-18622613 None:intergenic 45.0%
! AGAGTGCTTAAAAAAGGCCG+AGG - chr8_1:18622736-18622755 Msa1183390:intron 45.0%
GAGTGCTTAAAAAAGGCCGA+GGG - chr8_1:18622737-18622756 Msa1183390:intron 45.0%
AAGGCCGAGGGTAGAATATT+AGG - chr8_1:18622749-18622768 Msa1183390:intron 45.0%
ACAGCATGGTATCCCAAGTT+AGG + chr8_1:18622884-18622903 None:intergenic 45.0%
! ACGAGGAATGGGTTTCTGTA+AGG - chr8_1:18622954-18622973 Msa1183390:intron 45.0%
AAGCATATGAGTGAAGGTGG+TGG - chr8_1:18623061-18623080 Msa1183390:intron 45.0%
AGCTCCCATGTAGTCGAATT+TGG + chr8_1:18623091-18623110 None:intergenic 45.0%
TACATGGGAGCTTCTTTCTG+AGG - chr8_1:18623099-18623118 Msa1183390:intron 45.0%
ACATGGGAGCTTCTTTCTGA+GGG - chr8_1:18623100-18623119 Msa1183390:intron 45.0%
TTGTCAAGACGAAGACGACA+TGG - chr8_1:18623240-18623259 Msa1183390:intron 45.0%
GCAAAGATGAACCGTCAAAC+AGG - chr8_1:18623338-18623357 Msa1183390:intron 45.0%
GTGTGGTGTCTAACATGTGT+CGG - chr8_1:18623482-18623501 Msa1183390:CDS 45.0%
CACAACAGTTATGAAGGGCT+AGG - chr8_1:18623740-18623759 Msa1183390:CDS 45.0%
AAGGGCTAGGTTCTTATGCT+AGG - chr8_1:18623753-18623772 Msa1183390:CDS 45.0%
GGAATTGGACCCTTAGTAGA+TGG - chr8_1:18623914-18623933 Msa1183390:CDS 45.0%
!! GTGTGTGTGTGTTACTTCCT+TGG - chr8_1:18623961-18623980 Msa1183390:CDS 45.0%
GGATACAGGAAAAGAAGCCA+AGG + chr8_1:18623981-18624000 None:intergenic 45.0%
!!! TATAAATTTTTTAATTCAAA+AGG - chr8_1:18621783-18621802 Msa1183390:CDS 5.0%
CTCTTCCCCCCTTCAAACAA+AGG - chr8_1:18620227-18620246 Msa1183390:three_prime_UTR 50.0%
ACCAAAGACGCCACTGTTGT+TGG - chr8_1:18620863-18620882 Msa1183390:CDS 50.0%
TCCAACAACAGTGGCGTCTT+TGG + chr8_1:18620867-18620886 None:intergenic 50.0%
TGTTATCCGACCCCACTTAG+TGG - chr8_1:18620919-18620938 Msa1183390:CDS 50.0%
GTTATCCGACCCCACTTAGT+GGG - chr8_1:18620920-18620939 Msa1183390:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr8_1:18620928-18620947 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr8_1:18620934-18620953 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr8_1:18620931-18620950 Msa1183390:CDS 50.0%
CTCCACCAGAACTGCTTCAT+TGG - chr8_1:18621011-18621030 Msa1183390:CDS 50.0%
ACAGGCCAATGAAGCAGTTC+TGG + chr8_1:18621019-18621038 None:intergenic 50.0%
! ACTTTGGCTGATGGAGGCAT+CGG + chr8_1:18621078-18621097 None:intergenic 50.0%
GTCAGTGGTGACTCAGTTGA+TGG - chr8_1:18621662-18621681 Msa1183390:CDS 50.0%
ACGTTGGTGTGAGAACATGG+AGG + chr8_1:18621814-18621833 None:intergenic 50.0%
!! CACGGAGTTTCTAGTGCAGA+AGG - chr8_1:18622299-18622318 Msa1183390:intron 50.0%
CCATAACGACGAAGCGTATG+CGG - chr8_1:18623306-18623325 Msa1183390:intron 50.0%
TCCTCGATGTGTGTGTGTGT+GGG - chr8_1:18623608-18623627 Msa1183390:CDS 50.0%
CGACCCCACTTAGTGGGATA+AGG - chr8_1:18620926-18620945 Msa1183390:CDS 55.0%
! GGCCAATGAAGCAGTTCTGG+TGG + chr8_1:18621016-18621035 None:intergenic 55.0%
!! GCATCGGTGACTGGTTTGGA+GGG + chr8_1:18621062-18621081 None:intergenic 55.0%
! GGCCGGCTAAACTTTTGACG+TGG - chr8_1:18621847-18621866 Msa1183390:intron 55.0%
AGGACGAAGTTTACCGCGTG+TGG - chr8_1:18622828-18622847 Msa1183390:intron 55.0%
GGGGGCAGAAAAGCTTTACG+AGG - chr8_1:18622937-18622956 Msa1183390:intron 55.0%
!! TTCTGAGGCGCTTTCGTGCT+TGG - chr8_1:18623144-18623163 Msa1183390:intron 55.0%
CCGCATACGCTTCGTCGTTA+TGG + chr8_1:18623309-18623328 None:intergenic 55.0%
GTCCTCGATGTGTGTGTGTG+TGG - chr8_1:18623607-18623626 Msa1183390:CDS 55.0%
ACCCACACACACACACATCG+AGG + chr8_1:18623612-18623631 None:intergenic 55.0%
!! GGCATCGGTGACTGGTTTGG+AGG + chr8_1:18621063-18621082 None:intergenic 60.0%
!! GGAGGCATCGGTGACTGGTT+TGG + chr8_1:18621066-18621085 None:intergenic 60.0%
!! CTGATGGAGGCATCGGTGAC+TGG + chr8_1:18621071-18621090 None:intergenic 60.0%
!! AGACGACATGGAGAGCGCCG+AGG - chr8_1:18623252-18623271 Msa1183390:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 18620016 18624004 18620016 ID=Msa1183390;Name=Msa1183390
chr8_1 mRNA 18620016 18624004 18620016 ID=Msa1183390-mRNA-1;Parent=Msa1183390;Name=Msa1183390-mRNA-1;_AED=0.03;_eAED=0.05;_QI=0|1|0.5|1|1|1|2|557|586
chr8_1 exon 18620016 18621808 18620016 ID=Msa1183390-mRNA-1:exon:7153;Parent=Msa1183390-mRNA-1
chr8_1 exon 18623480 18624004 18623480 ID=Msa1183390-mRNA-1:exon:7152;Parent=Msa1183390-mRNA-1
chr8_1 CDS 18623480 18624004 18623480 ID=Msa1183390-mRNA-1:cds;Parent=Msa1183390-mRNA-1
chr8_1 CDS 18620573 18621808 18620573 ID=Msa1183390-mRNA-1:cds;Parent=Msa1183390-mRNA-1
chr8_1 three_prime_UTR 18620016 18620572 18620016 ID=Msa1183390-mRNA-1:three_prime_utr;Parent=Msa1183390-mRNA-1
Gene Sequence

>Msa1183390

ATGGGTATTGCTTTGACTGTAGTGAATCTGCATCCAAAGTGGACCCTATCATATCTATCTATCTCAAATCCAAACATCATTATTATCTTCAACAAACAACATTGGCAACAAAACATTGTGACTGAGAAAATGATGACTACTATTACCCCTCTTCAAATTCAATCTTCTTTACAAAACCAAAACGTTTCTCTTTCCCTTTCTTATTCTCATACTCTTCCCCCCTTCAAACAAAGGGTCAATGTGTTTTACACTGACAGTGGAATTGGAATTGGAGGAGCAAGAAGAGTTTCTGTCACTTGTTCAATCTCAAAGATTCACAGTTATGGTACACTTGATTATGAGAGAAAACCCAATTTGAAATGGAATGCTATATACAAGAGGATTTCGATGATGGAGAATCCTGAATTGGGTTCTGCTTCTGTGTTGAATCAATGGGAGAATGAAGGAAGGAATCTCACCAAATGGGAACTTTGCAGAGTTGTTAAAGAGTTGAGAAAGTACAGAAAACATGATAGAGCTCTTCAGGTATATGATTGGATGAACAATAGACCAGAGAGGTTTAGAATATCTGCAAGTGACGTTGCGATTCAGTTAGATCTAATCGCAAGAGTTCACGGAGTTTCTAGTGCAGAAGGTTTTTTTCTGAACCTAACCAATGATTTAAAAGACAAGAGAACATATGGTGCCCTCTTGAATGCATATGTTCATTCTAGATCAAGAGAAAAGGCAGAATCTTTACTCGAAGTAATGAGGAGTAAAAGGTACTTAATACATTCACTACCGTTTAATTTAATGATGACTCTGTACATGAACCTTAAGGATTATGATAAAGTCGATATGTTGGTTTCAGAAATGAAAGAAAAGAACATACAGCTAGATATATATACATATAATATCTGGTTGTCCTCTTGTGGATCTCAAGGATCAATAGAGAAGATGGAACAAGTTTTTGAACAGATGTCAAAGGATCCTACCATTATTCCTAATTGGAGTACATTTAGTACAATGGCTGCAATGTATATTAAGATGGAACTGTTTGAAAAAGCACAAGAGTGCTTAAAAAAGGCCGAGGGTAGAATATTAGGTCGAGATAAAGTACCTTTTCATTATCTCCTGAGTTTGTATGGAAGTGTTGGAAACAAGGACGAAGTTTACCGCGTGTGGAATAACTATAAATCAATGTTTCCAAGTATACCTAACTTGGGATACCATGCTGTTATTTCTTCTCTCGTAAGAATGGACGATATTGAGGGGGCAGAAAAGCTTTACGAGGAATGGGTTTCTGTAAGGCCCTCTGATGATTCTAGAATAGGAAACCTTCTCATAAGCTGGTATCTTAAGAAAGGTAAATCAGATAAAGTTTTTAGCTTCTTTAAGCATATGAGTGAAGGTGGTGGATGTCCAAATTCGACTACATGGGAGCTTCTTTCTGAGGGTCATATTGCTGAAAATAGGGTTTCTGAGGCGCTTTCGTGCTTGGAAAAAGCTTTTACGACAAGTGATTCAAAGAGTTGGAAACCCAAGCCAATAAAATTGGCTGCATTCCTTAAGCTTTGTCAAGACGAAGACGACATGGAGAGCGCCGAGGTTTTAATTGAGTTGTTGAAGAAGTCGGGATACCATAACGACGAAGCGTATGCGGCACTCATTAGCAAAGATGAACCGTCAAACAGGATTGAAAGAATTGATGATGTTGACAGTGAAAACATTGATGATGATGACTCTCAAGTGTTGTTCAGCCAAGTAGATAGTAGCTTTTGA
Protein sequence

>Msa1183390

MGIALTVVNLHPKWTLSYLSISNPNIIIIFNKQHWQQNIVTEKMMTTITPLQIQSSLQNQNVSLSLSYSHTLPPFKQRVNVFYTDSGIGIGGARRVSVTCSISKIHSYGTLDYERKPNLKWNAIYKRISMMENPELGSASVLNQWENEGRNLTKWELCRVVKELRKYRKHDRALQVYDWMNNRPERFRISASDVAIQLDLIARVHGVSSAEGFFLNLTNDLKDKRTYGALLNAYVHSRSREKAESLLEVMRSKRYLIHSLPFNLMMTLYMNLKDYDKVDMLVSEMKEKNIQLDIYTYNIWLSSCGSQGSIEKMEQVFEQMSKDPTIIPNWSTFSTMAAMYIKMELFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPNSTTWELLSEGHIAENRVSEALSCLEKAFTTSDSKSWKPKPIKLAAFLKLCQDEDDMESAEVLIELLKKSGYHNDEAYAALISKDEPSNRIERIDDVDSENIDDDDSQVLFSQVDSSF*