AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0743680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0743680 MtrunA17_Chr5g0445591 97.917 672 14 0 1 672 1 672 0.0 1350
Msa0743680 MtrunA17_Chr2g0280251 25.954 262 163 10 220 471 72 312 1.56e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0743680 AT1G55930.1 68.341 657 182 11 1 649 1 639 0.0 874
Msa0743680 AT3G13070.1 76.316 570 123 4 85 643 76 644 0.0 848
Msa0743680 AT1G55930.2 69.667 600 157 10 1 592 1 583 0.0 815

Find 174 sgRNAs with CRISPR-Local

Find 529 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAATTCTTCGTTTGTTTA+AGG 0.144682 5_1:-64159941 Msa0743680:CDS
CTTAAATTGCTTGGCTTAAA+AGG 0.171364 5_1:-64157354 Msa0743680:CDS
ACAAATAGTATTTCACTTCT+AGG 0.173486 5_1:+64152429 None:intergenic
AAAATTGGAATTGGGAAATT+AGG 0.179897 5_1:+64160651 None:intergenic
GTTTCTTCTCTTTCGGTTCC+TGG 0.217823 5_1:+64153143 None:intergenic
TTATGCAAAAGAAGAAAATT+TGG 0.227693 5_1:+64160488 None:intergenic
GGTTAATTGAAAGGGAAAAT+TGG 0.234280 5_1:+64160636 None:intergenic
TTCCTCACAACCATACTTAT+TGG 0.242888 5_1:-64158674 Msa0743680:CDS
ATTGTTATTGGCTTTGCTTT+TGG 0.245514 5_1:-64159911 Msa0743680:CDS
CCTTCAGTAGCCAAAACTTT+AGG 0.245516 5_1:+64160036 None:intergenic
GAGAATGCCAATGAAGGTTT+TGG 0.249627 5_1:-64160331 Msa0743680:CDS
GTAAATATGACATCTTTATT+AGG 0.251337 5_1:+64152520 None:intergenic
GGTGAAGAGAGGAATTATTT+TGG 0.252414 5_1:-64160094 Msa0743680:CDS
ATGTCTTCATGTGGTCTCTT+TGG 0.269483 5_1:+64152789 None:intergenic
AAAATATGTTTCTTCTCTTT+CGG 0.292690 5_1:+64153136 None:intergenic
GACACTCGAATCAGGGGTTC+TGG 0.292964 5_1:-64160415 Msa0743680:CDS
TAAGGAACAAGGATTGTTAT+TGG 0.294468 5_1:-64159923 Msa0743680:CDS
CTTCAGTAGCCAAAACTTTA+GGG 0.296810 5_1:+64160037 None:intergenic
TTGAAAGGGAAAATTGGAAT+TGG 0.312491 5_1:+64160642 None:intergenic
GTTTGTGGGGTGTTGGTGTT+TGG 0.313415 5_1:-64160063 Msa0743680:CDS
CCTTTCAAGAACTAACTTGA+TGG 0.314069 5_1:+64153204 None:intergenic
AATGCTGGATATGGTGTTAT+TGG 0.317649 5_1:-64160006 Msa0743680:CDS
AGCTTTCATCTTTCAAGTTA+TGG 0.321638 5_1:-64160246 Msa0743680:CDS
GCAACGTGTTGATAATATAA+TGG 0.324648 5_1:-64155171 Msa0743680:CDS
AATTGTTACCTTTCTTTCAA+TGG 0.330333 5_1:-64157382 Msa0743680:CDS
GTTTGGATGCCCTAAAGTTT+TGG 0.332563 5_1:-64160046 Msa0743680:CDS
CACCAATATGAGACGGTATC+AGG 0.333419 5_1:-64153271 Msa0743680:CDS
TATTGGAAAGTGTATACTTT+TGG 0.349846 5_1:-64159989 Msa0743680:CDS
GAAGTTTACAAATGAAGTTT+TGG 0.355145 5_1:-64160115 Msa0743680:CDS
AAGTATCACAGTTGGAGATT+TGG 0.355313 5_1:-64154999 Msa0743680:CDS
AAATTGGAATTGGGAAATTA+GGG 0.359199 5_1:+64160652 None:intergenic
ATTGTTACCTTTCTTTCAAT+GGG 0.363607 5_1:-64157381 Msa0743680:CDS
ATACGTTGTGCCAATAAGTA+TGG 0.364028 5_1:+64158664 None:intergenic
AGCTCCTCTTCAGTTACATA+TGG 0.364332 5_1:+64155801 None:intergenic
CGGTTCCTGGTGGTCACCAT+TGG 0.365554 5_1:+64153156 None:intergenic
GGCTTTGTATGTGAAGCCTT+TGG 0.366515 5_1:-64153250 Msa0743680:CDS
ATAGAACCCTCTATTTATCT+TGG 0.367209 5_1:+64152555 None:intergenic
TTCTGCATGTTATAACTCAT+TGG 0.376582 5_1:+64152583 None:intergenic
TTTGTACCCAAAACCTTCAT+TGG 0.380761 5_1:+64160324 None:intergenic
TTAGCAATGACACTCGAATC+AGG 0.381702 5_1:-64160423 Msa0743680:exon
TTGATGGTTTCTCCTGTCCT+TGG 0.385943 5_1:+64153220 None:intergenic
TTGCAGATTCAATGTCTGTT+TGG 0.392142 5_1:-64154867 Msa0743680:intron
TGGAGGAGAGTTGGTGGACT+TGG 0.394171 5_1:+64160716 None:intergenic
AACCTTTCCAAGATAAATAG+AGG 0.395660 5_1:-64152562 Msa0743680:three_prime_UTR
TGAAAGGGAAAATTGGAATT+GGG 0.398264 5_1:+64160643 None:intergenic
GCCAGTGGCATGGCTTTCTC+TGG 0.399023 5_1:-64157424 Msa0743680:CDS
TTCTTAGAGAATTTCGAATC+AGG 0.399483 5_1:-64154840 Msa0743680:CDS
TGCTACTGTTTGTGGGGTGT+TGG 0.407645 5_1:-64160070 Msa0743680:CDS
ACTGCAGCATTCGGCGAAGC+TGG 0.410977 5_1:-64158513 Msa0743680:CDS
ACAGCAAAATATTCCAAGTT+CGG 0.414859 5_1:-64160516 Msa0743680:five_prime_UTR
CAACGTGTTGATAATATAAT+GGG 0.420023 5_1:-64155170 Msa0743680:CDS
GATTTCAGTGAGAAGCAAAA+TGG 0.423188 5_1:+64157653 None:intergenic
AGCAATAGAAGAGGAAGAAC+AGG 0.424068 5_1:-64155745 Msa0743680:intron
GGTTTGAGAAGGAAGAGAAT+GGG 0.424300 5_1:+64160673 None:intergenic
ACTGACCACCCCACTTGCTC+TGG 0.425149 5_1:+64160739 None:intergenic
TAATGAATATGTAGTTGATC+AGG 0.426174 5_1:-64152763 Msa0743680:CDS
CACAGAGGTGGCTCGGTTTG+TGG 0.428116 5_1:-64157601 Msa0743680:intron
AAGCATCCCCATTGAAAGAA+AGG 0.428833 5_1:+64157374 None:intergenic
GCTGGTGTCAGCGCAGCAAC+AGG 0.434643 5_1:-64158495 Msa0743680:CDS
AGCCTGATACCGTCTCATAT+TGG 0.438335 5_1:+64153269 None:intergenic
AGCATATGCGATGGATCTGC+TGG 0.441250 5_1:-64155144 Msa0743680:CDS
GGTTCGTGAGTTGGCTGAAA+AGG 0.443988 5_1:-64158744 Msa0743680:CDS
GGTGTGGTGAATGCTGGATA+TGG 0.447491 5_1:-64160015 Msa0743680:CDS
GCTGAAAAGGAGTCTGAAAA+TGG 0.450196 5_1:-64158731 Msa0743680:CDS
ATGGGGATGCTTAAATTGCT+TGG 0.451732 5_1:-64157363 Msa0743680:CDS
GGGTTTGAGAAGGAAGAGAA+TGG 0.456666 5_1:+64160672 None:intergenic
ACTGAAGGTGTGGTGAATGC+TGG 0.457072 5_1:-64160021 Msa0743680:CDS
GAAGCTGCAACTGCAGCATT+CGG 0.461207 5_1:-64158522 Msa0743680:CDS
CAGTTGGACACAATAGGAAA+AGG 0.462993 5_1:+64160291 None:intergenic
ATGAGTATGGTGGAACTGTT+GGG 0.464601 5_1:-64154792 Msa0743680:CDS
AACTATTAAGAAAGCTAGAA+AGG 0.467493 5_1:-64152452 Msa0743680:three_prime_UTR
ACACTCGAATCAGGGGTTCT+GGG 0.470559 5_1:-64160414 Msa0743680:CDS
CTTCGTTTGTTTAAGGAACA+AGG 0.470581 5_1:-64159934 Msa0743680:CDS
AGCTTGAAGGTGAAGTGTAT+TGG 0.479042 5_1:-64160195 Msa0743680:CDS
TTTGTACGATTCTCATGCAC+AGG 0.480881 5_1:+64160354 None:intergenic
CCATCAAGTTAGTTCTTGAA+AGG 0.481575 5_1:-64153204 Msa0743680:CDS
CCAACACAGTTGGACACAAT+AGG 0.482123 5_1:+64160285 None:intergenic
CATCAAGTTAGTTCTTGAAA+GGG 0.483658 5_1:-64153203 Msa0743680:CDS
GCTGTCGTTCTTAATGAGTA+TGG 0.485683 5_1:-64154805 Msa0743680:CDS
AAATATTGCAGCAACTGCTC+TGG 0.490255 5_1:-64158550 Msa0743680:CDS
CGAGAAAGGTGAGTGCTGTT+CGG 0.496101 5_1:-64152947 Msa0743680:CDS
CGATTACTACACTTTGGCCT+TGG 0.498418 5_1:-64159855 Msa0743680:CDS
CCTATTGTGTCCAACTGTGT+TGG 0.498989 5_1:-64160285 Msa0743680:CDS
TCTAGGTCAGGCCAGTGGCA+TGG 0.499682 5_1:-64157434 Msa0743680:intron
AGCTCGCATTACTATGTAGC+CGG 0.504772 5_1:+64153692 None:intergenic
AGACTTCGATTACTACACTT+TGG 0.504973 5_1:-64159861 Msa0743680:CDS
GATGTTGTTGAGGAAATTGT+TGG 0.507415 5_1:-64154003 Msa0743680:CDS
GTCTTCTGAGAGTTGATCAA+TGG 0.508494 5_1:+64153638 None:intergenic
TACTACACTTTGGCCTTGGA+AGG 0.509755 5_1:-64159851 Msa0743680:intron
GAGGAAATACAAAAGAAAAC+CGG 0.512173 5_1:-64153711 Msa0743680:CDS
ACCCTCTATTTATCTTGGAA+AGG 0.513182 5_1:+64152560 None:intergenic
AAGGTAACAATTCTTCCTGC+AGG 0.515803 5_1:+64157393 None:intergenic
AGGAGCTAAAACTGATGCTA+AGG 0.517603 5_1:-64155785 Msa0743680:CDS
TGTAAACTTCAAATTAGCAT+CGG 0.521085 5_1:+64160128 None:intergenic
TACAAAGAGAATGCCAATGA+AGG 0.521281 5_1:-64160337 Msa0743680:CDS
AATGAGTATGGTGGAACTGT+TGG 0.522457 5_1:-64154793 Msa0743680:CDS
AGTTGGTGGAGCTAGCTTGA+AGG 0.527234 5_1:-64160208 Msa0743680:CDS
GTGAAGGCGTGGAGGAGAGT+TGG 0.528140 5_1:+64160707 None:intergenic
ACTCTAGAAAGTATCACAGT+TGG 0.529514 5_1:-64155007 Msa0743680:CDS
GAAGATGAGGCAGAGTATGA+TGG 0.530442 5_1:-64152822 Msa0743680:CDS
TTTGGATACATTCCAAGGAC+AGG 0.534270 5_1:-64153232 Msa0743680:CDS
AGTTGGACACAATAGGAAAA+GGG 0.534542 5_1:+64160292 None:intergenic
ACTAGCAGGAAATGCGAGAA+AGG 0.534984 5_1:-64152961 Msa0743680:CDS
TAGCAATGACACTCGAATCA+GGG 0.545433 5_1:-64160422 Msa0743680:exon
GGATATGATCGAAAATGTGT+TGG 0.552369 5_1:-64155405 Msa0743680:CDS
ACCAGAGAAAGCCATGCCAC+TGG 0.561580 5_1:+64157423 None:intergenic
TTACCAGGTACAAAATATGC+AGG 0.563099 5_1:+64154968 None:intergenic
TGCTTGGCTTAAAAGGAAGT+AGG 0.566558 5_1:-64157347 Msa0743680:intron
ATTGAAAGGGCCAACACAGT+TGG 0.567652 5_1:+64160275 None:intergenic
CTAAGGGGTGCAGAATTAAG+TGG 0.568729 5_1:-64155768 Msa0743680:CDS
ATGCAACCGAGGACCGAGGA+AGG 0.569347 5_1:+64160562 None:intergenic
CATCTGACAACCAGAGCAAG+TGG 0.569445 5_1:-64160749 Msa0743680:five_prime_UTR
TTTGGCTGCTACTGTTTGTG+GGG 0.569636 5_1:-64160076 Msa0743680:CDS
CGCAGCAACAGGAGTGATGA+CGG 0.569783 5_1:-64158484 Msa0743680:intron
TCTTTGACGCAGATACTAGC+AGG 0.570828 5_1:-64152975 Msa0743680:intron
TCTCTGGTACTGTATCCTGC+AGG 0.575131 5_1:-64157408 Msa0743680:CDS
ATAATGCCACAGAGGTGGCT+CGG 0.576593 5_1:-64157608 Msa0743680:CDS
CGGTTTGAAAGATTACATAG+TGG 0.579872 5_1:-64152927 Msa0743680:CDS
TGACACCAATGGTGACCACC+AGG 0.580712 5_1:-64153161 Msa0743680:CDS
GGAGCTAAAACTGATGCTAA+GGG 0.580822 5_1:-64155784 Msa0743680:CDS
GTTTGAGAAGGAAGAGAATG+GGG 0.583390 5_1:+64160674 None:intergenic
ATATTTACTATATTCATCCA+AGG 0.584441 5_1:-64152505 Msa0743680:three_prime_UTR
ACATAGTGGTGACGAAATGT+TGG 0.586851 5_1:-64152913 Msa0743680:CDS
AAGGTGAAGTGTATTGGTAG+TGG 0.586954 5_1:-64160189 Msa0743680:CDS
TTGAGAGTGTGAAGGCGTGG+AGG 0.589688 5_1:+64160699 None:intergenic
CTACATAGTAATGCGAGCTG+AGG 0.595387 5_1:-64153688 Msa0743680:CDS
TGGGAAATTAGGGTTTGAGA+AGG 0.597485 5_1:+64160662 None:intergenic
TAGAGAATTTCGAATCAGGA+AGG 0.597594 5_1:-64154836 Msa0743680:CDS
ATCTGACAACCAGAGCAAGT+GGG 0.598285 5_1:-64160748 Msa0743680:five_prime_UTR
TCTGCTGGATTATGTCCAAA+AGG 0.598511 5_1:-64155129 Msa0743680:intron
GAATTGAGAGTGTGAAGGCG+TGG 0.600054 5_1:+64160696 None:intergenic
ATTAAGTGGAGCAATAGAAG+AGG 0.604158 5_1:-64155754 Msa0743680:CDS
AAGCCTTTGGATACATTCCA+AGG 0.604313 5_1:-64153237 Msa0743680:CDS
ATGGGGAATTGAGAGTGTGA+AGG 0.605615 5_1:+64160691 None:intergenic
TGGTGAGGAATCTGAAGATG+AGG 0.605665 5_1:-64152835 Msa0743680:CDS
ATTCGATGAAAATGACTCGA+AGG 0.605810 5_1:-64153974 Msa0743680:intron
TGAGCCATATGTAACTGAAG+AGG 0.606858 5_1:-64155805 Msa0743680:CDS
AATAAGCACGATACCTTCCA+AGG 0.610333 5_1:+64159838 None:intergenic
AATGGGTATAGCATATGCGA+TGG 0.610921 5_1:-64155153 Msa0743680:CDS
AAGAAAATGGAACAGTGGTG+AGG 0.611792 5_1:-64152850 Msa0743680:CDS
AAGGCGTGGAGGAGAGTTGG+TGG 0.612269 5_1:+64160710 None:intergenic
AGCAATGACACTCGAATCAG+GGG 0.613707 5_1:-64160421 Msa0743680:exon
TCATTAGAAATGTCTTCATG+TGG 0.617541 5_1:+64152780 None:intergenic
ACCTTTCCAAGATAAATAGA+GGG 0.619558 5_1:-64152561 Msa0743680:three_prime_UTR
GGTTAAGAGTACTTGGCCGA+CGG 0.620282 5_1:-64159968 Msa0743680:CDS
TCTGACAACCAGAGCAAGTG+GGG 0.626242 5_1:-64160747 Msa0743680:five_prime_UTR
GTCGTTCTTAATGAGTATGG+TGG 0.629139 5_1:-64154802 Msa0743680:CDS
AACTCTTGAAGATGTTGTTG+AGG 0.632860 5_1:-64154013 Msa0743680:CDS
TCTTCTCTTTCGGTTCCTGG+TGG 0.632904 5_1:+64153146 None:intergenic
TTGGTTATGCGATGCAACCG+AGG 0.634085 5_1:+64160551 None:intergenic
ATTGCAACAACATCAACAAG+AGG 0.634332 5_1:+64155347 None:intergenic
TACTCCGAAGTGATGTTACT+CGG 0.634521 5_1:-64158697 Msa0743680:CDS
TACATAGTAATGCGAGCTGA+GGG 0.634796 5_1:-64153687 Msa0743680:CDS
TCGAATCAGGAAGGTTCACA+TGG 0.635122 5_1:-64154827 Msa0743680:CDS
TGTCCTTGGAATGTATCCAA+AGG 0.638487 5_1:+64153234 None:intergenic
GGGTTACACATCAATACTCA+AGG 0.641002 5_1:-64155286 Msa0743680:intron
TGCCAATAAGTATGGTTGTG+AGG 0.646643 5_1:+64158672 None:intergenic
GGTTCATAATGCCACAGAGG+TGG 0.647644 5_1:-64157613 Msa0743680:CDS
GTGAAAAGAAAATGGAACAG+TGG 0.650525 5_1:-64152855 Msa0743680:CDS
ACAAGTGATGAAAATCTACA+AGG 0.660380 5_1:+64155309 None:intergenic
TTGTTACCTTTCTTTCAATG+GGG 0.663367 5_1:-64157380 Msa0743680:CDS
TCAGGGTCACCAATATGAGA+CGG 0.666733 5_1:-64153278 Msa0743680:intron
CGAAGAATTTGCAACACCGT+CGG 0.668231 5_1:+64159952 None:intergenic
GACAACCAGAGCAAGTGGGG+TGG 0.668378 5_1:-64160744 Msa0743680:five_prime_UTR
TGCGATGCAACCGAGGACCG+AGG 0.677351 5_1:+64160558 None:intergenic
GAGCTAAAACTGATGCTAAG+GGG 0.682892 5_1:-64155783 Msa0743680:CDS
ATGCCTCTAGGTCAGGCCAG+TGG 0.689653 5_1:-64157439 Msa0743680:intron
CGCGGTTCATAATGCCACAG+AGG 0.691367 5_1:-64157616 Msa0743680:CDS
TTGTACGATTCTCATGCACA+GGG 0.692351 5_1:+64160355 None:intergenic
GATGACAACGATGACACCAA+TGG 0.698123 5_1:-64153172 Msa0743680:CDS
CACAAACCGAGCCACCTCTG+TGG 0.705597 5_1:+64157602 None:intergenic
TGAGTATGGTGGAACTGTTG+GGG 0.713650 5_1:-64154791 Msa0743680:intron
CTTGAACATCAAGATGCCAG+AGG 0.714743 5_1:-64153616 Msa0743680:intron
GGAACCGAGTAACATCACTT+CGG 0.717695 5_1:+64158693 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGAATAAATCAATATTT+TGG - chr5_1:64156815-64156834 Msa0743680:intron 10.0%
!!! TATATTATGTTTAATTTTGA+AGG - chr5_1:64158146-64158165 Msa0743680:intron 10.0%
!!! ATATTATGTTTAATTTTGAA+GGG - chr5_1:64158147-64158166 Msa0743680:intron 10.0%
!! TTAAAATTAACATAAAAAAG+AGG + chr5_1:64158601-64158620 None:intergenic 10.0%
!! AAATGATAAAAAAAAAATTG+AGG + chr5_1:64160475-64160494 None:intergenic 10.0%
!!! AAAATTTTGGTTAATTGAAA+GGG + chr5_1:64152556-64152575 None:intergenic 15.0%
!!! GAAAAAAATAGTGAAAATTT+TGG + chr5_1:64152569-64152588 None:intergenic 15.0%
!! TTGAATATTGTAATAATAAC+TGG - chr5_1:64153718-64153737 Msa0743680:intron 15.0%
!!! GACTAAATGAAATTTAAAAT+AGG + chr5_1:64155073-64155092 None:intergenic 15.0%
!! TACTTAAACAAAAGTAAAAT+AGG - chr5_1:64156517-64156536 Msa0743680:intron 15.0%
!! ACTTAAACAAAAGTAAAATA+GGG - chr5_1:64156518-64156537 Msa0743680:intron 15.0%
!! AAATCATTAGAGATAAAATT+GGG - chr5_1:64156987-64157006 Msa0743680:intron 15.0%
!! TTTATTGAATTTAACACTAA+AGG - chr5_1:64157335-64157354 Msa0743680:intron 15.0%
!!! TAAAATTTTATTTTCTCTAG+AGG + chr5_1:64157532-64157551 None:intergenic 15.0%
!! AAACACTATAAATAATCAAA+TGG + chr5_1:64157695-64157714 None:intergenic 15.0%
!! TTGACATAAATACAAATATA+TGG - chr5_1:64158459-64158478 Msa0743680:intron 15.0%
!!! TAACAATTTTGATAAGATAA+TGG - chr5_1:64159091-64159110 Msa0743680:intron 15.0%
!! ACTTATAAATAATACCATAA+GGG + chr5_1:64160112-64160131 None:intergenic 15.0%
!! AACTTATAAATAATACCATA+AGG + chr5_1:64160113-64160132 None:intergenic 15.0%
!!! ATTTTCTTTTCACAATTTTT+GGG + chr5_1:64160319-64160338 None:intergenic 15.0%
!!! TTTTATCATTTCTTTCTAAT+TGG - chr5_1:64160484-64160503 Msa0743680:five_prime_UTR 15.0%
!!! GAAAATTTTGGTTAATTGAA+AGG + chr5_1:64152557-64152576 None:intergenic 20.0%
!! TTATGCAAAAGAAGAAAATT+TGG + chr5_1:64152696-64152715 None:intergenic 20.0%
!! GGAAAAAATTTGAATTTAGT+TGG - chr5_1:64152956-64152975 Msa0743680:CDS 20.0%
!! AAAAATTTGAATTTAGTTGG+TGG - chr5_1:64152959-64152978 Msa0743680:CDS 20.0%
!!! AGTGACTATTTTTATATGTA+TGG - chr5_1:64153380-64153399 Msa0743680:intron 20.0%
!! TTCAACAAAACCAAAAAAAT+TGG + chr5_1:64153656-64153675 None:intergenic 20.0%
!! AAAAATCAATTCCTGTATAT+TGG - chr5_1:64153787-64153806 Msa0743680:intron 20.0%
!! AAAATCAATTCCTGTATATT+GGG - chr5_1:64153788-64153807 Msa0743680:intron 20.0%
!! AAAAATTATGACCTGTATAT+TGG - chr5_1:64153853-64153872 Msa0743680:intron 20.0%
!! AAAATTATGACCTGTATATT+GGG - chr5_1:64153854-64153873 Msa0743680:intron 20.0%
!! TTGATATACTGAAATATTCA+AGG + chr5_1:64154815-64154834 None:intergenic 20.0%
!! AGATAATTTATATCAAGTAC+AGG + chr5_1:64155109-64155128 None:intergenic 20.0%
!!! AATTATCTTTTCAAACAGAA+TGG - chr5_1:64155121-64155140 Msa0743680:intron 20.0%
!! AAAGATATTACAAGAGATTT+CGG + chr5_1:64155210-64155229 None:intergenic 20.0%
!! CCAAATATAAAAAAAGTAGA+AGG + chr5_1:64155624-64155643 None:intergenic 20.0%
!!! CCTTCTACTTTTTTTATATT+TGG - chr5_1:64155621-64155640 Msa0743680:intron 20.0%
!!! TTTTAAATTTTAATGCCTCT+AGG - chr5_1:64155730-64155749 Msa0743680:intron 20.0%
!! AATGTACAAGAGAATATTAA+TGG + chr5_1:64155880-64155899 None:intergenic 20.0%
!! TAAATGTATGAGAGATTAAA+TGG - chr5_1:64156055-64156074 Msa0743680:intron 20.0%
!! AAATGTATGAGAGATTAAAT+GGG - chr5_1:64156056-64156075 Msa0743680:intron 20.0%
!! GAAATCATTAGAGATAAAAT+TGG - chr5_1:64156986-64157005 Msa0743680:intron 20.0%
!! AATCATTAGAGATAAAATTG+GGG - chr5_1:64156988-64157007 Msa0743680:intron 20.0%
!! TGATTCATTACATATTGTTA+TGG - chr5_1:64157174-64157193 Msa0743680:intron 20.0%
!!! ATATGTTGATAATACTTATC+TGG - chr5_1:64157257-64157276 Msa0743680:intron 20.0%
!!! TATGTTGATAATACTTATCT+GGG - chr5_1:64157258-64157277 Msa0743680:intron 20.0%
!!! ACATTTTCACATTAAATTTC+AGG + chr5_1:64157614-64157633 None:intergenic 20.0%
!!! GTGTCTTGAATATATTTTAT+AGG - chr5_1:64157755-64157774 Msa0743680:intron 20.0%
!! AATATAACTGAATTCAAACT+GGG + chr5_1:64157934-64157953 None:intergenic 20.0%
!! AAATATAACTGAATTCAAAC+TGG + chr5_1:64157935-64157954 None:intergenic 20.0%
!! TGCATATTAAAGATATCAAT+TGG - chr5_1:64158540-64158559 Msa0743680:CDS 20.0%
!! ATTTAAGCAAATATTTGTAC+AGG + chr5_1:64158692-64158711 None:intergenic 20.0%
!! ATTATTGTAGATACATGTTT+AGG - chr5_1:64158710-64158729 Msa0743680:CDS 20.0%
!!! TCCTTTTTTTAATTGCTAAA+TGG - chr5_1:64158976-64158995 Msa0743680:intron 20.0%
!!! CCTTTTTTTAATTGCTAAAT+GGG - chr5_1:64158977-64158996 Msa0743680:intron 20.0%
!!! CTTTTTTTAATTGCTAAATG+GGG - chr5_1:64158978-64158997 Msa0743680:intron 20.0%
!! TCAAAATTGTTAGACATTAT+TGG + chr5_1:64159083-64159102 None:intergenic 20.0%
!! AATGTTCTTTAATGAAAACT+TGG + chr5_1:64159432-64159451 None:intergenic 20.0%
!! TGGAAAATGAAATAAAAAAG+TGG + chr5_1:64159595-64159614 None:intergenic 20.0%
!! ATAACAATAAATTGTGATAC+TGG + chr5_1:64159725-64159744 None:intergenic 20.0%
!! TTCAAAATCAACTTAATCAT+TGG + chr5_1:64159756-64159775 None:intergenic 20.0%
!! AAAATATGTTTCTTCTCTTT+CGG + chr5_1:64160048-64160067 None:intergenic 20.0%
!!! CATTTTCTTTTCACAATTTT+TGG + chr5_1:64160320-64160339 None:intergenic 20.0%
!! CAAAAATTGTGAAAAGAAAA+TGG - chr5_1:64160318-64160337 Msa0743680:CDS 20.0%
!!! TTTTCCAACTAATACAAAAA+TGG + chr5_1:64160522-64160541 None:intergenic 20.0%
!! GTAAATATGACATCTTTATT+AGG + chr5_1:64160664-64160683 None:intergenic 20.0%
!! ATATTTACTATATTCATCCA+AGG - chr5_1:64160676-64160695 Msa0743680:five_prime_UTR 20.0%
!! AAAGAAAAAACATGAACATT+TGG - chr5_1:64160699-64160718 Msa0743680:five_prime_UTR 20.0%
! AAATTGGAATTGGGAAATTA+GGG + chr5_1:64152532-64152551 None:intergenic 25.0%
! AAAATTGGAATTGGGAAATT+AGG + chr5_1:64152533-64152552 None:intergenic 25.0%
!!! TTGCTGTATTTTGATGAAAT+TGG + chr5_1:64152652-64152671 None:intergenic 25.0%
!!! AAAATACGATTTTTAGCTTG+TGG - chr5_1:64152715-64152734 Msa0743680:three_prime_UTR 25.0%
!!! AAATACGATTTTTAGCTTGT+GGG - chr5_1:64152716-64152735 Msa0743680:three_prime_UTR 25.0%
!! GAAAGCTTTTACAATTGAAA+GGG + chr5_1:64152922-64152941 None:intergenic 25.0%
!! TGAAAGCTTTTACAATTGAA+AGG + chr5_1:64152923-64152942 None:intergenic 25.0%
! TGTAAACTTCAAATTAGCAT+CGG + chr5_1:64153056-64153075 None:intergenic 25.0%
!! GAAGTTTACAAATGAAGTTT+TGG - chr5_1:64153066-64153085 Msa0743680:intron 25.0%
!!! TATTGGAAAGTGTATACTTT+TGG - chr5_1:64153192-64153211 Msa0743680:CDS 25.0%
! AATATAGTGTAGTTCGTAAA+AGG - chr5_1:64153426-64153445 Msa0743680:intron 25.0%
! AACATTATTCGTGATGATAT+GGG - chr5_1:64153500-64153519 Msa0743680:intron 25.0%
! ACTCATAATCCTAAACAAAT+GGG - chr5_1:64153818-64153837 Msa0743680:intron 25.0%
! ACTCATAATCCTAAACAAAT+GGG - chr5_1:64153818-64153837 Msa0743680:intron 25.0%
! GGCACAAATATATGTATATA+AGG + chr5_1:64154048-64154067 None:intergenic 25.0%
! GCATGATTTGATTGTAATAT+TGG - chr5_1:64154144-64154163 Msa0743680:intron 25.0%
! AAAACAAACAAAATTCTCAG+AGG + chr5_1:64154306-64154325 None:intergenic 25.0%
! GAAGTAACATATCTAATGTA+CGG + chr5_1:64154348-64154367 None:intergenic 25.0%
! GTTACTTCCTATGATTAATA+TGG - chr5_1:64154360-64154379 Msa0743680:intron 25.0%
! TAGTCAACCATATTAATCAT+AGG + chr5_1:64154370-64154389 None:intergenic 25.0%
!! AAGCTTTATATGTCAAATTC+TGG + chr5_1:64154880-64154899 None:intergenic 25.0%
! TATCACCAATTTGTGAAAAA+AGG - chr5_1:64154908-64154927 Msa0743680:intron 25.0%
!! ATCTTTTAGTGAATAGACAA+AGG - chr5_1:64154942-64154961 Msa0743680:intron 25.0%
!! TCTTTTAGTGAATAGACAAA+GGG - chr5_1:64154943-64154962 Msa0743680:intron 25.0%
! ATTTCGGACAAAAAGTTTAT+GGG + chr5_1:64155194-64155213 None:intergenic 25.0%
! GTTTATCTTCTTAATTCTCA+TGG - chr5_1:64155324-64155343 Msa0743680:CDS 25.0%
! AAATACACGTAGTTCATTAT+CGG + chr5_1:64155379-64155398 None:intergenic 25.0%
! ACGTATATTATACTTACAAG+AGG + chr5_1:64155430-64155449 None:intergenic 25.0%
! AATTGTTACCTTTCTTTCAA+TGG - chr5_1:64155799-64155818 Msa0743680:CDS 25.0%
! ATTGTTACCTTTCTTTCAAT+GGG - chr5_1:64155800-64155819 Msa0743680:CDS 25.0%
!!! TTCTCTTGTACATTTGTTTT+TGG - chr5_1:64155886-64155905 Msa0743680:intron 25.0%
! AATGTATGAGAGATTAAATG+GGG - chr5_1:64156057-64156076 Msa0743680:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr5_1:64156253-64156272 Msa0743680:intron 25.0%
! CATTCAATAAATGATGTATG+TGG + chr5_1:64156253-64156272 None:intergenic 25.0%
!!! ATGTTTACTTTTCATAACCA+AGG + chr5_1:64156367-64156386 None:intergenic 25.0%
! TTGGTTATGAAAAGTAAACA+TGG - chr5_1:64156366-64156385 Msa0743680:intron 25.0%
!! CAACCTTTTACTATTATAGA+TGG - chr5_1:64156431-64156450 Msa0743680:intron 25.0%
! AGACCATCTATAATAGTAAA+AGG + chr5_1:64156437-64156456 None:intergenic 25.0%
!! CAAAAGTAAAATAGGGTATT+TGG - chr5_1:64156525-64156544 Msa0743680:intron 25.0%
!! AATATTGTAGGTCTTATAGA+TGG + chr5_1:64156663-64156682 None:intergenic 25.0%
! ATAAGACCTACAATATTGTA+TGG - chr5_1:64156666-64156685 Msa0743680:intron 25.0%
! TAAGACCTACAATATTGTAT+GGG - chr5_1:64156667-64156686 Msa0743680:intron 25.0%
!!! ACTGAACTTACTTTTTCTAT+AGG + chr5_1:64156716-64156735 None:intergenic 25.0%
! TACAAAATGTTGTCAAATAG+CGG - chr5_1:64156855-64156874 Msa0743680:intron 25.0%
! GATTTCATTTCTAATACTAC+TGG + chr5_1:64156972-64156991 None:intergenic 25.0%
!!! TTTTCTTTAGTTTAGCTCTA+CGG + chr5_1:64157118-64157137 None:intergenic 25.0%
!! AAGAACAGGTGATTAATTTT+GGG - chr5_1:64157450-64157469 Msa0743680:intron 25.0%
!!! GTAGAGACAATTTTTTACAA+CGG + chr5_1:64157565-64157584 None:intergenic 25.0%
!!! CAACGTGTTGATAATATAAT+GGG - chr5_1:64158011-64158030 Msa0743680:intron 25.0%
!! GTAGATTTTACTACTGTTAT+TGG - chr5_1:64158078-64158097 Msa0743680:intron 25.0%
! AACTATGAGATTGGATTAAT+CGG + chr5_1:64158118-64158137 None:intergenic 25.0%
! ACATCGAAATTGAATTAACA+TGG - chr5_1:64158253-64158272 Msa0743680:intron 25.0%
! ATTAACATGGTGCATAATAT+TGG - chr5_1:64158266-64158285 Msa0743680:intron 25.0%
! AATTTATTGCAACCAAAATC+AGG + chr5_1:64158878-64158897 None:intergenic 25.0%
!! ATTTTGCCAATGATTTTATG+TGG - chr5_1:64158921-64158940 Msa0743680:intron 25.0%
! CCCATTTAGCAATTAAAAAA+AGG + chr5_1:64158980-64158999 None:intergenic 25.0%
! AAATATACAGAACTATTGCT+GGG + chr5_1:64159306-64159325 None:intergenic 25.0%
!! GTATATTTGCATCTGATTTT+TGG - chr5_1:64159377-64159396 Msa0743680:intron 25.0%
! CTAATATGTAAATGCATGTA+TGG + chr5_1:64159615-64159634 None:intergenic 25.0%
!! TATATCAGTGCTTGAAATTT+TGG - chr5_1:64159641-64159660 Msa0743680:intron 25.0%
! TTTAAAAGGAAAACCTGATT+GGG + chr5_1:64159691-64159710 None:intergenic 25.0%
! GGTAATCTTGTCAAAATATA+GGG + chr5_1:64159835-64159854 None:intergenic 25.0%
! TGGTAATCTTGTCAAAATAT+AGG + chr5_1:64159836-64159855 None:intergenic 25.0%
!! TTACCAATGTTTAAGATTTG+CGG - chr5_1:64159850-64159869 Msa0743680:intron 25.0%
!! GTGGTTACTTTATTATTTCA+GGG - chr5_1:64159886-64159905 Msa0743680:CDS 25.0%
!! GAAACATATTTTCAAACTTG+AGG - chr5_1:64160056-64160075 Msa0743680:CDS 25.0%
! TAATGAATATGTAGTTGATC+AGG - chr5_1:64160418-64160437 Msa0743680:CDS 25.0%
!! TTCTTTTTATGGAAGAACAT+TGG + chr5_1:64160571-64160590 None:intergenic 25.0%
! AAAAACATGAACATTTGGAT+AGG - chr5_1:64160704-64160723 Msa0743680:five_prime_UTR 25.0%
! AACTATTAAGAAAGCTAGAA+AGG - chr5_1:64160729-64160748 Msa0743680:five_prime_UTR 25.0%
! ACAAATAGTATTTCACTTCT+AGG + chr5_1:64160755-64160774 None:intergenic 25.0%
TGAAAGGGAAAATTGGAATT+GGG + chr5_1:64152541-64152560 None:intergenic 30.0%
TTGAAAGGGAAAATTGGAAT+TGG + chr5_1:64152542-64152561 None:intergenic 30.0%
GGTTAATTGAAAGGGAAAAT+TGG + chr5_1:64152548-64152567 None:intergenic 30.0%
ACAGCAAAATATTCCAAGTT+CGG - chr5_1:64152665-64152684 Msa0743680:three_prime_UTR 30.0%
AAATTTGGAAAAACCGAACT+TGG + chr5_1:64152681-64152700 None:intergenic 30.0%
!!! AATACGATTTTTAGCTTGTG+GGG - chr5_1:64152717-64152736 Msa0743680:three_prime_UTR 30.0%
!! AGCTTTCATCTTTCAAGTTA+TGG - chr5_1:64152935-64152954 Msa0743680:CDS 30.0%
!!! TACTTTTGGTTAAGAGTACT+TGG - chr5_1:64153206-64153225 Msa0743680:CDS 30.0%
GCAAATTCTTCGTTTGTTTA+AGG - chr5_1:64153240-64153259 Msa0743680:CDS 30.0%
TAAGGAACAAGGATTGTTAT+TGG - chr5_1:64153258-64153277 Msa0743680:CDS 30.0%
!!! ATTGTTATTGGCTTTGCTTT+TGG - chr5_1:64153270-64153289 Msa0743680:CDS 30.0%
!!! TTGTTATTGGCTTTGCTTTT+GGG - chr5_1:64153271-64153290 Msa0743680:CDS 30.0%
TGTATGGCATTGTTCAATAT+AGG - chr5_1:64153396-64153415 Msa0743680:intron 30.0%
GAACATTATTCGTGATGATA+TGG - chr5_1:64153499-64153518 Msa0743680:intron 30.0%
!!! GTTTGAGACACCAATTTTTT+TGG - chr5_1:64153643-64153662 Msa0743680:CDS 30.0%
!!! TTTTGGTTTTGTTGAAGTGA+TGG - chr5_1:64153660-64153679 Msa0743680:CDS 30.0%
!!! TTTGGTTTTGTTGAAGTGAT+GGG - chr5_1:64153661-64153680 Msa0743680:CDS 30.0%
GACTCATAATCCTAAACAAA+TGG - chr5_1:64153817-64153836 Msa0743680:intron 30.0%
CTAAACAAATGGGTAAATCT+GGG - chr5_1:64153828-64153847 Msa0743680:intron 30.0%
GACTCATAATCCTAAACAAA+TGG - chr5_1:64153817-64153836 Msa0743680:intron 30.0%
CTAAACAAATGGGTAAATCT+GGG - chr5_1:64153828-64153847 Msa0743680:intron 30.0%
AAGTTACTAAAGCAAGACAA+TGG + chr5_1:64154069-64154088 None:intergenic 30.0%
ATTGTCTTGCTTTAGTAACT+TGG - chr5_1:64154068-64154087 Msa0743680:intron 30.0%
TAATTTCCTTGCCAACAAAT+AGG + chr5_1:64154238-64154257 None:intergenic 30.0%
AACAAAATTCTCAGAGGAAA+AGG + chr5_1:64154300-64154319 None:intergenic 30.0%
!!! ACTGTTGATGACAATGTTTT+AGG - chr5_1:64154416-64154435 Msa0743680:intron 30.0%
! TATGTTTTCTTGTTCTTGCT+TGG - chr5_1:64154720-64154739 Msa0743680:intron 30.0%
CTTGCTTGGATATTAATAAC+AGG - chr5_1:64154734-64154753 Msa0743680:intron 30.0%
AACATAAACTCAGATTCACT+AGG - chr5_1:64154764-64154783 Msa0743680:intron 30.0%
! TATTCACTAAAAGATTAGCC+CGG + chr5_1:64154937-64154956 None:intergenic 30.0%
! CTTTTAGTGAATAGACAAAG+GGG - chr5_1:64154944-64154963 Msa0743680:intron 30.0%
GAAAATCCTACATCCTATAA+TGG + chr5_1:64155036-64155055 None:intergenic 30.0%
GATTTCGGACAAAAAGTTTA+TGG + chr5_1:64155195-64155214 None:intergenic 30.0%
! GGTATGAGCAATGATATTTT+TGG + chr5_1:64155241-64155260 None:intergenic 30.0%
ATTGAAGCTACAAATTCGTT+GGG - chr5_1:64155286-64155305 Msa0743680:intron 30.0%
AAGTTGAAAAAGAAATGCCA+TGG + chr5_1:64155690-64155709 None:intergenic 30.0%
TTGTTACCTTTCTTTCAATG+GGG - chr5_1:64155801-64155820 Msa0743680:CDS 30.0%
CTTAAATTGCTTGGCTTAAA+AGG - chr5_1:64155827-64155846 Msa0743680:intron 30.0%
TACAAGAGAATATTAATGGC+TGG + chr5_1:64155876-64155895 None:intergenic 30.0%
TAGAAAATGCAGAGTTATCA+TGG + chr5_1:64156015-64156034 None:intergenic 30.0%
! AAGTTACTTTATTGATCGTG+AGG - chr5_1:64156085-64156104 Msa0743680:intron 30.0%
! AGTTACTTTATTGATCGTGA+GGG - chr5_1:64156086-64156105 Msa0743680:intron 30.0%
TGTAATCTGGTCAAATCATA+TGG - chr5_1:64156155-64156174 Msa0743680:intron 30.0%
! AAGTTTCTTACATTTGAGAC+CGG + chr5_1:64156325-64156344 None:intergenic 30.0%
! AAGTTTCTTACATTTGAGAC+CGG - chr5_1:64156325-64156344 Msa0743680:intron 30.0%
ATGCTTACTCTATGTTGATA+CGG - chr5_1:64156469-64156488 Msa0743680:intron 30.0%
! TATTTGGAATGTAAGCTCTT+CGG - chr5_1:64156541-64156560 Msa0743680:intron 30.0%
TTGAATCTGTGATAGGAAAA+AGG - chr5_1:64156606-64156625 Msa0743680:intron 30.0%
GGTAAATTCCTTTGTAGAAA+AGG - chr5_1:64157009-64157028 Msa0743680:intron 30.0%
!! TTTTAAAAGCAGCGATTAAG+AGG - chr5_1:64157060-64157079 Msa0743680:intron 30.0%
TTTAAAAGCAGCGATTAAGA+GGG - chr5_1:64157061-64157080 Msa0743680:intron 30.0%
! ATTTGTTGAAGCAATGATCT+TGG - chr5_1:64157292-64157311 Msa0743680:intron 30.0%
TTTGTTGAAGCAATGATCTT+GGG - chr5_1:64157293-64157312 Msa0743680:intron 30.0%
! GAAGAACAGGTGATTAATTT+TGG - chr5_1:64157449-64157468 Msa0743680:intron 30.0%
!!! TGTGCTCTTTGTTTTAGTAA+TGG - chr5_1:64157631-64157650 Msa0743680:CDS 30.0%
! AATCAAATGGCTTTTGTAAG+TGG + chr5_1:64157682-64157701 None:intergenic 30.0%
ACAAGTGATGAAAATCTACA+AGG + chr5_1:64157875-64157894 None:intergenic 30.0%
! TTGTAGATTTTCATCACTTG+TGG - chr5_1:64157874-64157893 Msa0743680:intron 30.0%
! TGTAGATTTTCATCACTTGT+GGG - chr5_1:64157875-64157894 Msa0743680:intron 30.0%
!! GCAACGTGTTGATAATATAA+TGG - chr5_1:64158010-64158029 Msa0743680:intron 30.0%
! AGTAAAATCTACCAACCTTT+TGG + chr5_1:64158070-64158089 None:intergenic 30.0%
AATTCTGCAAACTATGAGAT+TGG + chr5_1:64158127-64158146 None:intergenic 30.0%
TAAGATTTAGTCAAGTTACC+AGG + chr5_1:64158231-64158250 None:intergenic 30.0%
TTCTTAGAGAATTTCGAATC+AGG - chr5_1:64158341-64158360 Msa0743680:intron 30.0%
AGTTTGGTTGAATTCTAGTA+TGG + chr5_1:64158426-64158445 None:intergenic 30.0%
TACTAGAATTCAACCAAACT+CGG - chr5_1:64158426-64158445 Msa0743680:intron 30.0%
TTAGTAAATCAGAATTGCCT+TGG + chr5_1:64158808-64158827 None:intergenic 30.0%
AAGAGTTACAAGCTGTTAAA+TGG + chr5_1:64159155-64159174 None:intergenic 30.0%
AATATACAGAACTATTGCTG+GGG + chr5_1:64159305-64159324 None:intergenic 30.0%
CAAATATACAGAACTATTGC+TGG + chr5_1:64159307-64159326 None:intergenic 30.0%
!! CATTCTTTTGTTGCTATTAC+AGG - chr5_1:64159448-64159467 Msa0743680:intron 30.0%
GAGGAAATACAAAAGAAAAC+CGG - chr5_1:64159470-64159489 Msa0743680:intron 30.0%
! CTTTAAAAGGAAAACCTGAT+TGG + chr5_1:64159692-64159711 None:intergenic 30.0%
! CAATCAGGTTTTCCTTTTAA+AGG - chr5_1:64159690-64159709 Msa0743680:intron 30.0%
!!! TGGCACTTTTTTCCTTTAAA+AGG + chr5_1:64159705-64159724 None:intergenic 30.0%
ATCTTGTCAAAATATAGGGT+AGG + chr5_1:64159831-64159850 None:intergenic 30.0%
! TACCAATGTTTAAGATTTGC+GGG - chr5_1:64159851-64159870 Msa0743680:intron 30.0%
AAAGTAACCACCGTATTAAT+AGG + chr5_1:64159877-64159896 None:intergenic 30.0%
! GGTGGTTACTTTATTATTTC+AGG - chr5_1:64159885-64159904 Msa0743680:CDS 30.0%
! CATCAAGTTAGTTCTTGAAA+GGG - chr5_1:64159978-64159997 Msa0743680:CDS 30.0%
TCATTAGAAATGTCTTCATG+TGG + chr5_1:64160404-64160423 None:intergenic 30.0%
!!! TGTGCCATTTTTGTATTAGT+TGG - chr5_1:64160515-64160534 Msa0743680:five_prime_UTR 30.0%
!! TTGGTTCTCTCTTCTTTTTA+TGG + chr5_1:64160582-64160601 None:intergenic 30.0%
TTCTGCATGTTATAACTCAT+TGG + chr5_1:64160601-64160620 None:intergenic 30.0%
AACCTTTCCAAGATAAATAG+AGG - chr5_1:64160619-64160638 Msa0743680:five_prime_UTR 30.0%
ACCTTTCCAAGATAAATAGA+GGG - chr5_1:64160620-64160639 Msa0743680:five_prime_UTR 30.0%
ATAGAACCCTCTATTTATCT+TGG + chr5_1:64160629-64160648 None:intergenic 30.0%
!!! GTTCATGTTTTTTCTTTCCT+TGG + chr5_1:64160696-64160715 None:intergenic 30.0%
!! TCATTGTTTTTCACCTTCCT+CGG - chr5_1:64152606-64152625 Msa0743680:three_prime_UTR 35.0%
TACAAAGAGAATGCCAATGA+AGG - chr5_1:64152844-64152863 Msa0743680:CDS 35.0%
! AGAATGCCAATGAAGGTTTT+GGG - chr5_1:64152851-64152870 Msa0743680:CDS 35.0%
TTTGTACCCAAAACCTTCAT+TGG + chr5_1:64152860-64152879 None:intergenic 35.0%
!!! ATGAAGGTTTTGGGTACAAA+TGG - chr5_1:64152860-64152879 Msa0743680:CDS 35.0%
!!! TGAAGGTTTTGGGTACAAAT+GGG - chr5_1:64152861-64152880 Msa0743680:CDS 35.0%
AGTTGGACACAATAGGAAAA+GGG + chr5_1:64152892-64152911 None:intergenic 35.0%
!! AATGAAGTTTTGGTGAAGAG+AGG - chr5_1:64153076-64153095 Msa0743680:intron 35.0%
! GGTGAAGAGAGGAATTATTT+TGG - chr5_1:64153087-64153106 Msa0743680:intron 35.0%
CTTCAGTAGCCAAAACTTTA+GGG + chr5_1:64153147-64153166 None:intergenic 35.0%
!! AATGCTGGATATGGTGTTAT+TGG - chr5_1:64153175-64153194 Msa0743680:CDS 35.0%
CTTCGTTTGTTTAAGGAACA+AGG - chr5_1:64153247-64153266 Msa0743680:CDS 35.0%
AGACTTCGATTACTACACTT+TGG - chr5_1:64153320-64153339 Msa0743680:intron 35.0%
CAAACAGTTAGATAGCAGAT+GGG + chr5_1:64153628-64153647 None:intergenic 35.0%
TCAAACAGTTAGATAGCAGA+TGG + chr5_1:64153629-64153648 None:intergenic 35.0%
AGTCTTACATCCCAATATAC+AGG + chr5_1:64153801-64153820 None:intergenic 35.0%
CCAGATTTACCCATTTGTTT+AGG + chr5_1:64153830-64153849 None:intergenic 35.0%
CCTAAACAAATGGGTAAATC+TGG - chr5_1:64153827-64153846 Msa0743680:intron 35.0%
AGTCTTACATCCCAATATAC+AGG + chr5_1:64153801-64153820 None:intergenic 35.0%
CCAGATTTACCCATTTGTTT+AGG + chr5_1:64153830-64153849 None:intergenic 35.0%
CCTAAACAAATGGGTAAATC+TGG - chr5_1:64153827-64153846 Msa0743680:intron 35.0%
TAACTAGTATTCACCTTCAG+TGG + chr5_1:64154103-64154122 None:intergenic 35.0%
GAGGAAAAGGAACTATAGTA+TGG + chr5_1:64154287-64154306 None:intergenic 35.0%
!!! AATGTTTTAGGTTCGTGAGT+TGG - chr5_1:64154428-64154447 Msa0743680:intron 35.0%
TTCCTCACAACCATACTTAT+TGG - chr5_1:64154507-64154526 Msa0743680:intron 35.0%
ATACGTTGTGCCAATAAGTA+TGG + chr5_1:64154520-64154539 None:intergenic 35.0%
CAGGAGTTTGCAAGTTTAAT+GGG + chr5_1:64154845-64154864 None:intergenic 35.0%
TCAGGAGTTTGCAAGTTTAA+TGG + chr5_1:64154846-64154865 None:intergenic 35.0%
!! AATTTGTGAAAAAAGGTGCC+CGG - chr5_1:64154915-64154934 Msa0743680:intron 35.0%
! ATTCACTAAAAGATTAGCCC+GGG + chr5_1:64154936-64154955 None:intergenic 35.0%
TATCCACATGTCAGCAATTT+AGG - chr5_1:64155008-64155027 Msa0743680:CDS 35.0%
AGCAATTTAGGCACCATTAT+AGG - chr5_1:64155020-64155039 Msa0743680:intron 35.0%
GATTGAAGCTACAAATTCGT+TGG - chr5_1:64155285-64155304 Msa0743680:intron 35.0%
CTTCTCTCTGTAATCATACA+AGG - chr5_1:64155502-64155521 Msa0743680:intron 35.0%
GATTTCAGTGAGAAGCAAAA+TGG + chr5_1:64155531-64155550 None:intergenic 35.0%
!!! TTTGTTTGTTTTGCACACCA+TGG - chr5_1:64155670-64155689 Msa0743680:intron 35.0%
!! AATTTTAATGCCTCTAGGTC+AGG - chr5_1:64155735-64155754 Msa0743680:intron 35.0%
AATGCATCCGCTTAATGAAA+GGG + chr5_1:64155973-64155992 None:intergenic 35.0%
AAATGCATCCGCTTAATGAA+AGG + chr5_1:64155974-64155993 None:intergenic 35.0%
TATGTATGGTAGCTGTTAGA+TGG - chr5_1:64156112-64156131 Msa0743680:intron 35.0%
!! AGATGGTTGGTTACAGTTTT+TGG - chr5_1:64156129-64156148 Msa0743680:intron 35.0%
!! GATGGTTGGTTACAGTTTTT+GGG - chr5_1:64156130-64156149 Msa0743680:intron 35.0%
!!! CAGTTTTTGGGTTTGTAATC+TGG - chr5_1:64156142-64156161 Msa0743680:intron 35.0%
AGGATAAAAAATACTCCCTC+CGG + chr5_1:64156347-64156366 None:intergenic 35.0%
!!! GAGGGAGTATTTTTTATCCT+TGG - chr5_1:64156347-64156366 Msa0743680:intron 35.0%
! ATTTGGAATGTAAGCTCTTC+GGG - chr5_1:64156542-64156561 Msa0743680:intron 35.0%
ACACAGTTAGAGGTGAAAAT+TGG - chr5_1:64156569-64156588 Msa0743680:intron 35.0%
GAAAATTGGAGAAAGACTTC+AGG - chr5_1:64156583-64156602 Msa0743680:intron 35.0%
TCAGTCCCATACAATATTGT+AGG + chr5_1:64156675-64156694 None:intergenic 35.0%
CAGAGATGAGAATATTGCAA+TGG - chr5_1:64156737-64156756 Msa0743680:intron 35.0%
ATTGCAATGGATAAGCAGTT+TGG - chr5_1:64156750-64156769 Msa0743680:intron 35.0%
TTGGGGATCATGAAAAATTG+TGG + chr5_1:64156916-64156935 None:intergenic 35.0%
!! TATCCAAAGTGTTGTCGATT+GGG + chr5_1:64156934-64156953 None:intergenic 35.0%
!! TTATCCAAAGTGTTGTCGAT+TGG + chr5_1:64156935-64156954 None:intergenic 35.0%
! ATCTGCAACCTTTTCTACAA+AGG + chr5_1:64157020-64157039 None:intergenic 35.0%
AACAGAAGCCTTTATTCACT+AGG + chr5_1:64157228-64157247 None:intergenic 35.0%
ATTAAGTGGAGCAATAGAAG+AGG - chr5_1:64157427-64157446 Msa0743680:CDS 35.0%
!! TTTTCTCTAGAGGAGAGAAA+GGG + chr5_1:64157522-64157541 None:intergenic 35.0%
!! ATTTTCTCTAGAGGAGAGAA+AGG + chr5_1:64157523-64157542 None:intergenic 35.0%
GGATATGATCGAAAATGTGT+TGG - chr5_1:64157776-64157795 Msa0743680:intron 35.0%
ATTGCAACAACATCAACAAG+AGG + chr5_1:64157837-64157856 None:intergenic 35.0%
TGTATCATGACATGTTTCCT+AGG - chr5_1:64157973-64157992 Msa0743680:intron 35.0%
GTATCATGACATGTTTCCTA+GGG - chr5_1:64157974-64157993 Msa0743680:intron 35.0%
!! ACTCTAGAAAGTATCACAGT+TGG - chr5_1:64158174-64158193 Msa0743680:intron 35.0%
AAGTATCACAGTTGGAGATT+TGG - chr5_1:64158182-64158201 Msa0743680:intron 35.0%
TTACCAGGTACAAAATATGC+AGG + chr5_1:64158216-64158235 None:intergenic 35.0%
AACAGACATTGAATCTGCAA+AGG + chr5_1:64158314-64158333 None:intergenic 35.0%
TTGCAGATTCAATGTCTGTT+TGG - chr5_1:64158314-64158333 Msa0743680:intron 35.0%
TAGAGAATTTCGAATCAGGA+AGG - chr5_1:64158345-64158364 Msa0743680:intron 35.0%
ACACTGCAAAGTATAACTGT+AGG - chr5_1:64158507-64158526 Msa0743680:CDS 35.0%
ATTGGAACATGCTATCACTA+TGG - chr5_1:64158558-64158577 Msa0743680:CDS 35.0%
TTGGAACATGCTATCACTAT+GGG - chr5_1:64158559-64158578 Msa0743680:CDS 35.0%
TTCTCTACTTTCTGATTCCA+AGG - chr5_1:64158788-64158807 Msa0743680:intron 35.0%
AACAGAAAGATGAGAACAGA+AGG + chr5_1:64158844-64158863 None:intergenic 35.0%
AACCAAAATCAGGAAAGCTA+GGG + chr5_1:64158868-64158887 None:intergenic 35.0%
AGGATGCCACATAAAATCAT+TGG + chr5_1:64158930-64158949 None:intergenic 35.0%
ATTATTGGCAGATCACAGAA+TGG + chr5_1:64159068-64159087 None:intergenic 35.0%
AACTCTTGAAGATGTTGTTG+AGG - chr5_1:64159168-64159187 Msa0743680:intron 35.0%
GATGTTGTTGAGGAAATTGT+TGG - chr5_1:64159178-64159197 Msa0743680:intron 35.0%
ATTCGATGAAAATGACTCGA+AGG - chr5_1:64159207-64159226 Msa0743680:intron 35.0%
!! TCTTTTGTTGCTATTACAGG+AGG - chr5_1:64159451-64159470 Msa0743680:intron 35.0%
! TTTGAGATGCAAAGATGCTA+GGG + chr5_1:64159805-64159824 None:intergenic 35.0%
CCTTTCAAGAACTAACTTGA+TGG + chr5_1:64159980-64159999 None:intergenic 35.0%
! CCATCAAGTTAGTTCTTGAA+AGG - chr5_1:64159977-64159996 Msa0743680:CDS 35.0%
ATCGATGATATTGTCCCTTA+TGG - chr5_1:64160095-64160114 Msa0743680:CDS 35.0%
! CTTGTTACTTCACACAGATT+CGG + chr5_1:64160165-64160184 None:intergenic 35.0%
CGGTTTGAAAGATTACATAG+TGG - chr5_1:64160254-64160273 Msa0743680:CDS 35.0%
GTGAAAAGAAAATGGAACAG+TGG - chr5_1:64160326-64160345 Msa0743680:CDS 35.0%
ACCCTCTATTTATCTTGGAA+AGG + chr5_1:64160624-64160643 None:intergenic 35.0%
GTTTGAGAAGGAAGAGAATG+GGG + chr5_1:64152510-64152529 None:intergenic 40.0%
GGTTTGAGAAGGAAGAGAAT+GGG + chr5_1:64152511-64152530 None:intergenic 40.0%
TGGGAAATTAGGGTTTGAGA+AGG + chr5_1:64152522-64152541 None:intergenic 40.0%
TTAGCAATGACACTCGAATC+AGG - chr5_1:64152758-64152777 Msa0743680:CDS 40.0%
TAGCAATGACACTCGAATCA+GGG - chr5_1:64152759-64152778 Msa0743680:CDS 40.0%
! GGGTCATCGAGTTTTCATTT+CGG - chr5_1:64152787-64152806 Msa0743680:CDS 40.0%
! GGTCATCGAGTTTTCATTTC+GGG - chr5_1:64152788-64152807 Msa0743680:CDS 40.0%
TTGTACGATTCTCATGCACA+GGG + chr5_1:64152829-64152848 None:intergenic 40.0%
TTTGTACGATTCTCATGCAC+AGG + chr5_1:64152830-64152849 None:intergenic 40.0%
! GAGAATGCCAATGAAGGTTT+TGG - chr5_1:64152850-64152869 Msa0743680:CDS 40.0%
CAGTTGGACACAATAGGAAA+AGG + chr5_1:64152893-64152912 None:intergenic 40.0%
AGCTTGAAGGTGAAGTGTAT+TGG - chr5_1:64152986-64153005 Msa0743680:intron 40.0%
! AAGGTGAAGTGTATTGGTAG+TGG - chr5_1:64152992-64153011 Msa0743680:intron 40.0%
!!! ATTTTGGCTGCTACTGTTTG+TGG - chr5_1:64153103-64153122 Msa0743680:intron 40.0%
!! TTTTGGCTGCTACTGTTTGT+GGG - chr5_1:64153104-64153123 Msa0743680:intron 40.0%
! GTTTGGATGCCCTAAAGTTT+TGG - chr5_1:64153135-64153154 Msa0743680:CDS 40.0%
CCTTCAGTAGCCAAAACTTT+AGG + chr5_1:64153148-64153167 None:intergenic 40.0%
!!! CCTAAAGTTTTGGCTACTGA+AGG - chr5_1:64153145-64153164 Msa0743680:CDS 40.0%
!!! TCTTTCGGCTTTTTTCTCTC+TGG - chr5_1:64153294-64153313 Msa0743680:intron 40.0%
AATAAGCACGATACCTTCCA+AGG + chr5_1:64153346-64153365 None:intergenic 40.0%
GTTCGTAAAAGGATTGTTGC+CGG - chr5_1:64153437-64153456 Msa0743680:intron 40.0%
TTCGTAAAAGGATTGTTGCC+GGG - chr5_1:64153438-64153457 Msa0743680:intron 40.0%
! TTAGATAGCAGATGGGTTTC+TGG + chr5_1:64153621-64153640 None:intergenic 40.0%
TTAGCGACTCACCTATTTGT+TGG - chr5_1:64154224-64154243 Msa0743680:intron 40.0%
GCTGAAAAGGAGTCTGAAAA+TGG - chr5_1:64154450-64154469 Msa0743680:intron 40.0%
TACTCCGAAGTGATGTTACT+CGG - chr5_1:64154484-64154503 Msa0743680:intron 40.0%
TGCCAATAAGTATGGTTGTG+AGG + chr5_1:64154512-64154531 None:intergenic 40.0%
TCGATAAGTTGTATGCAGTG+TGG - chr5_1:64154607-64154626 Msa0743680:intron 40.0%
AAATATTGCAGCAACTGCTC+TGG - chr5_1:64154631-64154650 Msa0743680:intron 40.0%
!!! GGGCACCTTTTTTCACAAAT+TGG + chr5_1:64154916-64154935 None:intergenic 40.0%
!! ATTTGTGAAAAAAGGTGCCC+GGG - chr5_1:64154916-64154935 Msa0743680:intron 40.0%
TTAGTGAATAGACAAAGGGG+CGG - chr5_1:64154947-64154966 Msa0743680:intron 40.0%
TAGGCACCATTATAGGATGT+AGG - chr5_1:64155027-64155046 Msa0743680:intron 40.0%
ATCACAAAACCTTACCCTGA+CGG - chr5_1:64155157-64155176 Msa0743680:CDS 40.0%
AAAAAGAAACCGTCAGGGTA+AGG + chr5_1:64155169-64155188 None:intergenic 40.0%
!! AATCACTCCAAAAAGCATCG+CGG - chr5_1:64155547-64155566 Msa0743680:intron 40.0%
! TTATGAACCGCGATGCTTTT+TGG + chr5_1:64155557-64155576 None:intergenic 40.0%
AAGGTAACAATTCTTCCTGC+AGG + chr5_1:64155791-64155810 None:intergenic 40.0%
AAGCATCCCCATTGAAAGAA+AGG + chr5_1:64155810-64155829 None:intergenic 40.0%
ATGGGGATGCTTAAATTGCT+TGG - chr5_1:64155818-64155837 Msa0743680:intron 40.0%
TGCTTGGCTTAAAAGGAAGT+AGG - chr5_1:64155834-64155853 Msa0743680:intron 40.0%
TCTTAGCCCCTTTCATTAAG+CGG - chr5_1:64155963-64155982 Msa0743680:intron 40.0%
ATGCATCCGCTTAATGAAAG+GGG + chr5_1:64155972-64155991 None:intergenic 40.0%
!! GATCGTGAGGGTTTTATGTA+TGG - chr5_1:64156098-64156117 Msa0743680:intron 40.0%
TATGGTAGCTGTTAGATGGT+TGG - chr5_1:64156116-64156135 Msa0743680:intron 40.0%
TGGTCAAATCATATGGCACA+AGG - chr5_1:64156162-64156181 Msa0743680:intron 40.0%
GTTTCTTTATGTACTCCCTC+CGG - chr5_1:64156196-64156215 Msa0743680:intron 40.0%
! TTCTTACATTTGAGACCGGA+GGG + chr5_1:64156329-64156348 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG + chr5_1:64156328-64156347 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG - chr5_1:64156328-64156347 Msa0743680:intron 40.0%
! TTCTTACATTTGAGACCGGA+GGG - chr5_1:64156329-64156348 Msa0743680:intron 40.0%
TAAGCTCGTAGCATAATGAG+TGG - chr5_1:64156403-64156422 Msa0743680:intron 40.0%
TGTTGATACGGAGCAAACAT+TGG - chr5_1:64156481-64156500 Msa0743680:intron 40.0%
!! CTTCAGGTTGAATCTGTGAT+AGG - chr5_1:64156599-64156618 Msa0743680:intron 40.0%
TAAGCAGTTTGGTCAACTAG+CGG - chr5_1:64156761-64156780 Msa0743680:intron 40.0%
AACTAGCGGCTATAGATTAG+TGG - chr5_1:64156775-64156794 Msa0743680:intron 40.0%
ACTTTAGCTATGACGAGTAG+CGG - chr5_1:64156879-64156898 Msa0743680:intron 40.0%
!! ATCCAAAGTGTTGTCGATTG+GGG + chr5_1:64156933-64156952 None:intergenic 40.0%
GTAGAAAAGGTTGCAGATGT+AGG - chr5_1:64157022-64157041 Msa0743680:intron 40.0%
AAGGTTGCAGATGTAGGATA+TGG - chr5_1:64157028-64157047 Msa0743680:intron 40.0%
GCATCAGACTATCCTACATT+TGG + chr5_1:64157091-64157110 None:intergenic 40.0%
ATGTAGGATAGTCTGATGCT+AGG - chr5_1:64157092-64157111 Msa0743680:intron 40.0%
CTTTATTCACTAGGTGAGGT+TGG + chr5_1:64157219-64157238 None:intergenic 40.0%
CAACCTCACCTAGTGAATAA+AGG - chr5_1:64157217-64157236 Msa0743680:intron 40.0%
AAGCCTTTATTCACTAGGTG+AGG + chr5_1:64157223-64157242 None:intergenic 40.0%
TGAGCCATATGTAACTGAAG+AGG - chr5_1:64157376-64157395 Msa0743680:CDS 40.0%
AGCTCCTCTTCAGTTACATA+TGG + chr5_1:64157383-64157402 None:intergenic 40.0%
AGGAGCTAAAACTGATGCTA+AGG - chr5_1:64157396-64157415 Msa0743680:CDS 40.0%
GGAGCTAAAACTGATGCTAA+GGG - chr5_1:64157397-64157416 Msa0743680:CDS 40.0%
GAGCTAAAACTGATGCTAAG+GGG - chr5_1:64157398-64157417 Msa0743680:CDS 40.0%
AGCAATAGAAGAGGAAGAAC+AGG - chr5_1:64157436-64157455 Msa0743680:intron 40.0%
GGGTTACACATCAATACTCA+AGG - chr5_1:64157895-64157914 Msa0743680:intron 40.0%
CATGATACAGTTAGCACACT+GGG + chr5_1:64157962-64157981 None:intergenic 40.0%
TCATGATACAGTTAGCACAC+TGG + chr5_1:64157963-64157982 None:intergenic 40.0%
TCAACACGTTGCTCAAAAAC+AGG + chr5_1:64158002-64158021 None:intergenic 40.0%
AATGGGTATAGCATATGCGA+TGG - chr5_1:64158028-64158047 Msa0743680:intron 40.0%
TCTGCTGGATTATGTCCAAA+AGG - chr5_1:64158052-64158071 Msa0743680:intron 40.0%
CTGGATTATGTCCAAAAGGT+TGG - chr5_1:64158056-64158075 Msa0743680:intron 40.0%
! AAGCCTGCATATTTTGTACC+TGG - chr5_1:64158210-64158229 Msa0743680:intron 40.0%
GCTGTCGTTCTTAATGAGTA+TGG - chr5_1:64158376-64158395 Msa0743680:intron 40.0%
GTCGTTCTTAATGAGTATGG+TGG - chr5_1:64158379-64158398 Msa0743680:intron 40.0%
! AATGAGTATGGTGGAACTGT+TGG - chr5_1:64158388-64158407 Msa0743680:intron 40.0%
! ATGAGTATGGTGGAACTGTT+GGG - chr5_1:64158389-64158408 Msa0743680:intron 40.0%
CAAACAAACTGATCCGAGTT+TGG + chr5_1:64158442-64158461 None:intergenic 40.0%
CAACCAAAATCAGGAAAGCT+AGG + chr5_1:64158869-64158888 None:intergenic 40.0%
TACATAGTAATGCGAGCTGA+GGG - chr5_1:64159494-64159513 Msa0743680:intron 40.0%
! GTCTTCTGAGAGTTGATCAA+TGG + chr5_1:64159546-64159565 None:intergenic 40.0%
ATAAAAAAGTGGCGAACCTC+TGG + chr5_1:64159584-64159603 None:intergenic 40.0%
CTTTATTACAGCACCCAATC+AGG - chr5_1:64159675-64159694 Msa0743680:intron 40.0%
! GTTTGAGATGCAAAGATGCT+AGG + chr5_1:64159806-64159825 None:intergenic 40.0%
GATTTGCGGGCCTATTAATA+CGG - chr5_1:64159864-64159883 Msa0743680:CDS 40.0%
AAGCCTTTGGATACATTCCA+AGG - chr5_1:64159944-64159963 Msa0743680:CDS 40.0%
TGTCCTTGGAATGTATCCAA+AGG + chr5_1:64159950-64159969 None:intergenic 40.0%
TTTGGATACATTCCAAGGAC+AGG - chr5_1:64159949-64159968 Msa0743680:CDS 40.0%
! ACATAGTGGTGACGAAATGT+TGG - chr5_1:64160268-64160287 Msa0743680:CDS 40.0%
AAGAAAATGGAACAGTGGTG+AGG - chr5_1:64160331-64160350 Msa0743680:CDS 40.0%
ATGTCTTCATGTGGTCTCTT+TGG + chr5_1:64160395-64160414 None:intergenic 40.0%
ATCTGACAACCAGAGCAAGT+GGG - chr5_1:64152433-64152452 Msa0743680:three_prime_UTR 45.0%
! ATGGGGAATTGAGAGTGTGA+AGG + chr5_1:64152493-64152512 None:intergenic 45.0%
GGGTTTGAGAAGGAAGAGAA+TGG + chr5_1:64152512-64152531 None:intergenic 45.0%
AGCAATGACACTCGAATCAG+GGG - chr5_1:64152760-64152779 Msa0743680:CDS 45.0%
CCAACACAGTTGGACACAAT+AGG + chr5_1:64152899-64152918 None:intergenic 45.0%
CCTATTGTGTCCAACTGTGT+TGG - chr5_1:64152896-64152915 Msa0743680:CDS 45.0%
ATTGAAAGGGCCAACACAGT+TGG + chr5_1:64152909-64152928 None:intergenic 45.0%
TTTGGCTGCTACTGTTTGTG+GGG - chr5_1:64153105-64153124 Msa0743680:intron 45.0%
!!! AGTTTTGGCTACTGAAGGTG+TGG - chr5_1:64153150-64153169 Msa0743680:CDS 45.0%
CGAAGAATTTGCAACACCGT+CGG + chr5_1:64153232-64153251 None:intergenic 45.0%
!! GGCTTTGCTTTTGGGTCTTT+CGG - chr5_1:64153279-64153298 Msa0743680:intron 45.0%
CGATTACTACACTTTGGCCT+TGG - chr5_1:64153326-64153345 Msa0743680:intron 45.0%
!! TACTACACTTTGGCCTTGGA+AGG - chr5_1:64153330-64153349 Msa0743680:intron 45.0%
TCGTAAAAGGATTGTTGCCG+GGG - chr5_1:64153439-64153458 Msa0743680:intron 45.0%
!!! AGTTTTGGAGGCGAGTTTTG+TGG - chr5_1:64153470-64153489 Msa0743680:intron 45.0%
!! GAGGCGAGTTTTGTGGAAAT+AGG - chr5_1:64153477-64153496 Msa0743680:intron 45.0%
! GACTCACCTATTTGTTGGCA+AGG - chr5_1:64154229-64154248 Msa0743680:intron 45.0%
GGAACCGAGTAACATCACTT+CGG + chr5_1:64154491-64154510 None:intergenic 45.0%
CTTGCAAACTCCTGATGTGA+TGG - chr5_1:64154851-64154870 Msa0743680:CDS 45.0%
! ATTCTGGTTGCCATCACATC+AGG + chr5_1:64154864-64154883 None:intergenic 45.0%
GTGCCTAAATTGCTGACATG+TGG + chr5_1:64155014-64155033 None:intergenic 45.0%
GGGTCAAAAAGAAACCGTCA+GGG + chr5_1:64155174-64155193 None:intergenic 45.0%
TGGGTCAAAAAGAAACCGTC+AGG + chr5_1:64155175-64155194 None:intergenic 45.0%
! CATACCACTCATCTGAAGCT+TGG - chr5_1:64155255-64155274 Msa0743680:intron 45.0%
CAAACCAAGCTTCAGATGAG+TGG + chr5_1:64155262-64155281 None:intergenic 45.0%
GCAGAGTTATCATGGTGCAT+GGG + chr5_1:64156007-64156026 None:intergenic 45.0%
TGCAGAGTTATCATGGTGCA+TGG + chr5_1:64156008-64156027 None:intergenic 45.0%
ACGAGCTTAACACAAGAAGG+TGG + chr5_1:64156392-64156411 None:intergenic 45.0%
GCTACGAGCTTAACACAAGA+AGG + chr5_1:64156395-64156414 None:intergenic 45.0%
AAAGGCCACTCAAGCTAAAC+TGG - chr5_1:64156624-64156643 Msa0743680:intron 45.0%
!! AGCTTCCAGTTTAGCTTGAG+TGG + chr5_1:64156632-64156651 None:intergenic 45.0%
GGGACTGAAACTTGAGCAAT+AGG - chr5_1:64156687-64156706 Msa0743680:intron 45.0%
ATCCCCAATCGACAACACTT+TGG - chr5_1:64156928-64156947 Msa0743680:intron 45.0%
AAAGCAGCGATTAAGAGGGT+AGG - chr5_1:64157065-64157084 Msa0743680:intron 45.0%
TAAGAGGGTAGGCCAAATGT+AGG - chr5_1:64157076-64157095 Msa0743680:intron 45.0%
ACTAGGTGAGGTTGGCAATA+TGG + chr5_1:64157211-64157230 None:intergenic 45.0%
TGCTCAAAAACAGGAACCCT+AGG + chr5_1:64157993-64158012 None:intergenic 45.0%
TCGAATCAGGAAGGTTCACA+TGG - chr5_1:64158354-64158373 Msa0743680:intron 45.0%
! TGAGTATGGTGGAACTGTTG+GGG - chr5_1:64158390-64158409 Msa0743680:intron 45.0%
!! TGCCCTAGCTTTCCTGATTT+TGG - chr5_1:64158863-64158882 Msa0743680:intron 45.0%
TACTAAATGCAGCAAGCACG+TGG + chr5_1:64158954-64158973 None:intergenic 45.0%
ATACAGAACTATTGCTGGGG+AGG + chr5_1:64159302-64159321 None:intergenic 45.0%
AGCTCGCATTACTATGTAGC+CGG + chr5_1:64159492-64159511 None:intergenic 45.0%
CTACATAGTAATGCGAGCTG+AGG - chr5_1:64159493-64159512 Msa0743680:intron 45.0%
CTTGAACATCAAGATGCCAG+AGG - chr5_1:64159565-64159584 Msa0743680:intron 45.0%
AGATGCAAAGATGCTAGGGT+AGG + chr5_1:64159801-64159820 None:intergenic 45.0%
GGCCCGCAAATCTTAAACAT+TGG + chr5_1:64159856-64159875 None:intergenic 45.0%
TCAGGGTCACCAATATGAGA+CGG - chr5_1:64159903-64159922 Msa0743680:CDS 45.0%
CACCAATATGAGACGGTATC+AGG - chr5_1:64159910-64159929 Msa0743680:CDS 45.0%
AGCCTGATACCGTCTCATAT+TGG + chr5_1:64159915-64159934 None:intergenic 45.0%
! GGCTTTGTATGTGAAGCCTT+TGG - chr5_1:64159931-64159950 Msa0743680:CDS 45.0%
! TTGATGGTTTCTCCTGTCCT+TGG + chr5_1:64159964-64159983 None:intergenic 45.0%
GATGACAACGATGACACCAA+TGG - chr5_1:64160009-64160028 Msa0743680:CDS 45.0%
GTTTCTTCTCTTTCGGTTCC+TGG + chr5_1:64160041-64160060 None:intergenic 45.0%
TCTTTGACGCAGATACTAGC+AGG - chr5_1:64160206-64160225 Msa0743680:CDS 45.0%
ACTAGCAGGAAATGCGAGAA+AGG - chr5_1:64160220-64160239 Msa0743680:CDS 45.0%
TGGTGAGGAATCTGAAGATG+AGG - chr5_1:64160346-64160365 Msa0743680:CDS 45.0%
GAAGATGAGGCAGAGTATGA+TGG - chr5_1:64160359-64160378 Msa0743680:CDS 45.0%
!! TATATATTATTAAATTAAAG+TGG + chr5_1:64158753-64158772 None:intergenic 5.0%
CATCTGACAACCAGAGCAAG+TGG - chr5_1:64152432-64152451 Msa0743680:three_prime_UTR 50.0%
TCTGACAACCAGAGCAAGTG+GGG - chr5_1:64152434-64152453 Msa0743680:three_prime_UTR 50.0%
! GAATTGAGAGTGTGAAGGCG+TGG + chr5_1:64152488-64152507 None:intergenic 50.0%
! TTTTCACCTTCCTCGGTCCT+CGG - chr5_1:64152613-64152632 Msa0743680:three_prime_UTR 50.0%
TTGGTTATGCGATGCAACCG+AGG + chr5_1:64152633-64152652 None:intergenic 50.0%
ACACTCGAATCAGGGGTTCT+GGG - chr5_1:64152767-64152786 Msa0743680:CDS 50.0%
!! AGTTGGTGGAGCTAGCTTGA+AGG - chr5_1:64152973-64152992 Msa0743680:intron 50.0%
TGCTACTGTTTGTGGGGTGT+TGG - chr5_1:64153111-64153130 Msa0743680:intron 50.0%
!! GTTTGTGGGGTGTTGGTGTT+TGG - chr5_1:64153118-64153137 Msa0743680:intron 50.0%
! ACTGAAGGTGTGGTGAATGC+TGG - chr5_1:64153160-64153179 Msa0743680:CDS 50.0%
GGTGTGGTGAATGCTGGATA+TGG - chr5_1:64153166-64153185 Msa0743680:CDS 50.0%
!! GGTTAAGAGTACTTGGCCGA+CGG - chr5_1:64153213-64153232 Msa0743680:CDS 50.0%
AAAAGGATTGTTGCCGGGGT+TGG - chr5_1:64153443-64153462 Msa0743680:intron 50.0%
AAAGGATTGTTGCCGGGGTT+GGG - chr5_1:64153444-64153463 Msa0743680:intron 50.0%
TCCAAAACTCAACCCAACCC+CGG + chr5_1:64153459-64153478 None:intergenic 50.0%
TTGGATCATGTCGCCACTGA+AGG - chr5_1:64154087-64154106 Msa0743680:intron 50.0%
! GGTTCGTGAGTTGGCTGAAA+AGG - chr5_1:64154437-64154456 Msa0743680:intron 50.0%
GAAGCTGCAACTGCAGCATT+CGG - chr5_1:64154659-64154678 Msa0743680:intron 50.0%
GGTTCATAATGCCACAGAGG+TGG - chr5_1:64155568-64155587 Msa0743680:intron 50.0%
ATAATGCCACAGAGGTGGCT+CGG - chr5_1:64155573-64155592 Msa0743680:intron 50.0%
TCTCTGGTACTGTATCCTGC+AGG - chr5_1:64155773-64155792 Msa0743680:CDS 50.0%
GAGTTATCATGGTGCATGGG+TGG + chr5_1:64156004-64156023 None:intergenic 50.0%
TGGAATGTAAGCTCTTCGGG+AGG - chr5_1:64156545-64156564 Msa0743680:intron 50.0%
AGCATATGCGATGGATCTGC+TGG - chr5_1:64158037-64158056 Msa0743680:intron 50.0%
AAATGCAGCAAGCACGTGGA+AGG + chr5_1:64158950-64158969 None:intergenic 50.0%
TTGCTGGGGAGGAAAAGTGA+CGG + chr5_1:64159291-64159310 None:intergenic 50.0%
!! GTAGGCTGCAATGGTTCTGA+GGG + chr5_1:64159783-64159802 None:intergenic 50.0%
TTGCGGGCCTATTAATACGG+TGG - chr5_1:64159867-64159886 Msa0743680:CDS 50.0%
TCTTCTCTTTCGGTTCCTGG+TGG + chr5_1:64160038-64160057 None:intergenic 50.0%
! CGAGAAAGGTGAGTGCTGTT+CGG - chr5_1:64160234-64160253 Msa0743680:CDS 50.0%
!! TGGAGGAGAGTTGGTGGACT+TGG + chr5_1:64152468-64152487 None:intergenic 55.0%
! TTGAGAGTGTGAAGGCGTGG+AGG + chr5_1:64152485-64152504 None:intergenic 55.0%
GACACTCGAATCAGGGGTTC+TGG - chr5_1:64152766-64152785 Msa0743680:CDS 55.0%
!!! GGGGTTGGGTTGAGTTTTGG+AGG - chr5_1:64153458-64153477 Msa0743680:intron 55.0%
CGCAGCAACAGGAGTGATGA+CGG - chr5_1:64154697-64154716 Msa0743680:intron 55.0%
CGCGGTTCATAATGCCACAG+AGG - chr5_1:64155565-64155584 Msa0743680:intron 55.0%
ACCAGAGAAAGCCATGCCAC+TGG + chr5_1:64155761-64155780 None:intergenic 55.0%
! TTCGGGAGGCACACAGTTAG+AGG - chr5_1:64156559-64156578 Msa0743680:intron 55.0%
! GGTAGGCTGCAATGGTTCTG+AGG + chr5_1:64159784-64159803 None:intergenic 55.0%
GATGCTAGGGTAGGCTGCAA+TGG + chr5_1:64159792-64159811 None:intergenic 55.0%
TGACACCAATGGTGACCACC+AGG - chr5_1:64160020-64160039 Msa0743680:CDS 55.0%
GACAACCAGAGCAAGTGGGG+TGG - chr5_1:64152437-64152456 Msa0743680:three_prime_UTR 60.0%
ACTGACCACCCCACTTGCTC+TGG + chr5_1:64152445-64152464 None:intergenic 60.0%
AAGGCGTGGAGGAGAGTTGG+TGG + chr5_1:64152474-64152493 None:intergenic 60.0%
! GTGAAGGCGTGGAGGAGAGT+TGG + chr5_1:64152477-64152496 None:intergenic 60.0%
ATGCAACCGAGGACCGAGGA+AGG + chr5_1:64152622-64152641 None:intergenic 60.0%
!!! GCCGGGGTTGGGTTGAGTTT+TGG - chr5_1:64153455-64153474 Msa0743680:intron 60.0%
ACTGCAGCATTCGGCGAAGC+TGG - chr5_1:64154668-64154687 Msa0743680:intron 60.0%
CACAAACCGAGCCACCTCTG+TGG + chr5_1:64155582-64155601 None:intergenic 60.0%
!! CACAGAGGTGGCTCGGTTTG+TGG - chr5_1:64155580-64155599 Msa0743680:intron 60.0%
ATGCCTCTAGGTCAGGCCAG+TGG - chr5_1:64155742-64155761 Msa0743680:intron 60.0%
! ATGCCACTGGCCTGACCTAG+AGG + chr5_1:64155748-64155767 None:intergenic 60.0%
TCTAGGTCAGGCCAGTGGCA+TGG - chr5_1:64155747-64155766 Msa0743680:CDS 60.0%
GCCAGTGGCATGGCTTTCTC+TGG - chr5_1:64155757-64155776 Msa0743680:CDS 60.0%
CGGTTCCTGGTGGTCACCAT+TGG + chr5_1:64160028-64160047 None:intergenic 60.0%
TGCGATGCAACCGAGGACCG+AGG + chr5_1:64152626-64152645 None:intergenic 65.0%
! GCTGGTGTCAGCGCAGCAAC+AGG - chr5_1:64154686-64154705 Msa0743680:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 64152425 64160778 64152425 ID=Msa0743680;Name=Msa0743680
chr5_1 mRNA 64152425 64160778 64152425 ID=Msa0743680-mRNA-1;Parent=Msa0743680;Name=Msa0743680-mRNA-1;_AED=0.06;_eAED=0.06;_QI=339|1|1|1|1|1|14|315|672
chr5_1 exon 64152425 64152985 64152425 ID=Msa0743680-mRNA-1:exon:18962;Parent=Msa0743680-mRNA-1
chr5_1 exon 64153126 64153296 64153126 ID=Msa0743680-mRNA-1:exon:18961;Parent=Msa0743680-mRNA-1
chr5_1 exon 64153617 64153733 64153617 ID=Msa0743680-mRNA-1:exon:18960;Parent=Msa0743680-mRNA-1
chr5_1 exon 64153975 64154040 64153975 ID=Msa0743680-mRNA-1:exon:18959;Parent=Msa0743680-mRNA-1
chr5_1 exon 64154792 64154883 64154792 ID=Msa0743680-mRNA-1:exon:18958;Parent=Msa0743680-mRNA-1
chr5_1 exon 64154972 64155035 64154972 ID=Msa0743680-mRNA-1:exon:18957;Parent=Msa0743680-mRNA-1
chr5_1 exon 64155130 64155208 64155130 ID=Msa0743680-mRNA-1:exon:18956;Parent=Msa0743680-mRNA-1
chr5_1 exon 64155287 64155426 64155287 ID=Msa0743680-mRNA-1:exon:18955;Parent=Msa0743680-mRNA-1
chr5_1 exon 64155746 64155827 64155746 ID=Msa0743680-mRNA-1:exon:18954;Parent=Msa0743680-mRNA-1
chr5_1 exon 64157348 64157451 64157348 ID=Msa0743680-mRNA-1:exon:18953;Parent=Msa0743680-mRNA-1
chr5_1 exon 64157602 64157679 64157602 ID=Msa0743680-mRNA-1:exon:18952;Parent=Msa0743680-mRNA-1
chr5_1 exon 64158485 64158578 64158485 ID=Msa0743680-mRNA-1:exon:18951;Parent=Msa0743680-mRNA-1
chr5_1 exon 64158668 64158765 64158668 ID=Msa0743680-mRNA-1:exon:18950;Parent=Msa0743680-mRNA-1
chr5_1 exon 64159852 64160778 64159852 ID=Msa0743680-mRNA-1:exon:18949;Parent=Msa0743680-mRNA-1
chr5_1 five_prime_UTR 64160440 64160778 64160440 ID=Msa0743680-mRNA-1:five_prime_utr;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64159852 64160439 64159852 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64158668 64158765 64158668 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64158485 64158578 64158485 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64157602 64157679 64157602 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64157348 64157451 64157348 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64155746 64155827 64155746 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64155287 64155426 64155287 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64155130 64155208 64155130 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64154972 64155035 64154972 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64154792 64154883 64154792 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64153975 64154040 64153975 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64153617 64153733 64153617 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64153126 64153296 64153126 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 CDS 64152740 64152985 64152740 ID=Msa0743680-mRNA-1:cds;Parent=Msa0743680-mRNA-1
chr5_1 three_prime_UTR 64152425 64152739 64152425 ID=Msa0743680-mRNA-1:three_prime_utr;Parent=Msa0743680-mRNA-1
Gene Sequence

>Msa0743680

ATGACACTCGAATCAGGGGTTCTGGGTCATCGAGTTTTCATTTCGGGTTCGAAATTGTTTTACCCTGTGCATGAGAATCGTACAAAGAGAATGCCAATGAAGGTTTTGGGTACAAATGGGAGATACCCTTTTCCTATTGTGTCCAACTGTGTTGGCCCTTTCAATTGTAAAAGCTTTCATCTTTCAAGTTATGGAAAAAATTTGAATTTAGTTGGTGGAGCTAGCTTGAAGGTGAAGTGTATTGGTAGTGGTAGTGATAGTGATTGTTTGCGAGCGAAAAACAATGTTTCCGATGCTAATTTGAAGTTTACAAATGAAGTTTTGGTGAAGAGAGGAATTATTTTGGCTGCTACTGTTTGTGGGGTGTTGGTGTTTGGATGCCCTAAAGTTTTGGCTACTGAAGGTGTGGTGAATGCTGGATATGGTGTTATTGGAAAGTGTATACTTTTGGTTAAGAGTACTTGGCCGACGGTGTTGCAAATTCTTCGTTTGTTTAAGGAACAAGGATTGTTATTGGCTTTGCTTTTGGGTCTTTCGGCTTTTTTCTCTCTGGCAGAGACTTCGATTACTACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAGTCTGAAAATGGCGTCTTCAGACTACTCCGAAGTGATGTTACTCGGTTCCTCACAACCATACTTATTGGCACAACTGTGGTAAATATTGCAGCAACTGCTCTGGTCACAGAAGCTGCAACTGCAGCATTCGGCGAAGCTGGTGTCAGCGCAGCAACAGGAGTGATGACGGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATCGCGGTTCATAATGCCACAGAGGTGGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCTCTGGTACTGTATCCTGCAGGAAGAATTGTTACCTTTCTTTCAATGGGGATGCTTAAATTGCTTGGCTTAAAAGGAAGTAGTGAGCCATATGTAACTGAAGAGGAGCTAAAACTGATGCTAAGGGGTGCAGAATTAAGTGGAGCAATAGAAGAGGAAGAACAGGATATGATCGAAAATGTGTTGGAGATAAAAGACACACATGTCAGAGAAGTTATGACGCCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTTGTAGATTTTCATCACTTGTGGGTTACACATCAATACTCAAGGGTTCCTGTTTTTGAGCAACGTGTTGATAATATAATGGGTATAGCATATGCGATGGATCTGCTGGATTATGTCCAAAAGGGCGAAACTCTAGAAAGTATCACAGTTGGAGATTTGGCTCACAAGCCTGCATATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAATTTCGAATCAGGAAGGTTCACATGGCTGTCGTTCTTAATGAGTATGGTGGAACTGTTGGGCTTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATATTCGATGAAAATGACTCGAAGGAGGAAATACAAAAGAAAACCGGCTACATAGTAATGCGAGCTGAGGGCGTTTTTGATGTCGATGCTAACACATCCATTGATCAACTCTCAGAAGACTTGAACATCAAGATGCCAGAGGGTCACCAATATGAGACGGTATCAGGCTTTGTATGTGAAGCCTTTGGATACATTCCAAGGACAGGAGAAACCATCAAGTTAGTTCTTGAAAGGGATGATGAAGATGACAACGATGACACCAATGGTGACCACCAGGAACCGAAAGAGAAGAAACATATTTTCAAACTTGAGATACTAGCAGGAAATGCGAGAAAGGTGAGTGCTGTTCGGTTTGAAAGATTACATAGTGGTGACGAAATGTTGGAAGCGAAAGAAGTAACACGAATGTTCCCAAAAATTGTGAAAAGAAAATGGAACAGTGGTGAGGAATCTGAAGATGAGGCAGAGTATGATGGATATACATTTCCAAAGAGACCACATGAAGACATTTCTAATGAATATGTAGTTGATCAGGAAAATTCTCATAGTAATTATTAA

Protein sequence

>Msa0743680

MTLESGVLGHRVFISGSKLFYPVHENRTKRMPMKVLGTNGRYPFPIVSNCVGPFNCKSFHLSSYGKNLNLVGGASLKVKCIGSGSDSDCLRAKNNVSDANLKFTNEVLVKRGIILAATVCGVLVFGCPKVLATEGVVNAGYGVIGKCILLVKSTWPTVLQILRLFKEQGLLLALLLGLSAFFSLAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIAATALVTEAATAAFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPAGRIVTFLSMGMLKLLGLKGSSEPYVTEEELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGETLESITVGDLAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGLVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGETIKLVLERDDEDDNDDTNGDHQEPKEKKHIFKLEILAGNARKVSAVRFERLHSGDEMLEAKEVTRMFPKIVKRKWNSGEESEDEAEYDGYTFPKRPHEDISNEYVVDQENSHSNY*