Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216850 | PNX94886.1 | 90.214 | 327 | 32 | 0 | 1 | 327 | 1 | 327 | 0.0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216850 | sp|F4ICF4|RBL10_ARATH | 56.863 | 306 | 117 | 3 | 23 | 313 | 25 | 330 | 1.80e-117 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216850 | A0A2K3MVU0 | 90.214 | 327 | 32 | 0 | 1 | 327 | 1 | 327 | 0.0 | 614 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0216850 | -0.800200 | 1.611491e-48 | -8.615850e-47 |
| Msa0023480 | Msa0216850 | -0.815310 | 9.869078e-52 | -8.615850e-47 |
| Msa0036540 | Msa0216850 | -0.821918 | 3.127348e-53 | -8.615850e-47 |
| Msa0059950 | Msa0216850 | -0.817227 | 3.677909e-52 | -8.615850e-47 |
| Msa0090510 | Msa0216850 | -0.819932 | 8.958776e-53 | -8.615850e-47 |
| Msa0144420 | Msa0216850 | -0.805412 | 1.351976e-49 | -8.615850e-47 |
| Msa0144430 | Msa0216850 | -0.800414 | 1.457619e-48 | -8.615850e-47 |
| Msa0162630 | Msa0216850 | -0.800254 | 1.571396e-48 | -8.615850e-47 |
| Msa0183910 | Msa0216850 | -0.820315 | 7.321125e-53 | -8.615850e-47 |
| Msa0216850 | Msa0296050 | 0.856447 | 3.197423e-62 | -8.615850e-47 |
| Msa0216850 | Msa0322240 | -0.814486 | 1.503592e-51 | -8.615850e-47 |
| Msa0216850 | Msa0333850 | 0.910037 | 2.930452e-82 | -8.615850e-47 |
| Msa0216850 | Msa0333970 | 0.849403 | 3.307137e-60 | -8.615850e-47 |
| Msa0216850 | Msa0370580 | 0.824633 | 7.261063e-54 | -8.615850e-47 |
| Msa0216850 | Msa0374340 | 0.802612 | 5.166297e-49 | -8.615850e-47 |
| Msa0216850 | Msa0518170 | -0.803551 | 3.302669e-49 | -8.615850e-47 |
| Msa0216850 | Msa0574930 | -0.800769 | 1.233755e-48 | -8.615850e-47 |
| Msa0216850 | Msa0576120 | 0.809292 | 2.033903e-50 | -8.615850e-47 |
| Msa0216850 | Msa0796580 | 0.802827 | 4.663702e-49 | -8.615850e-47 |
| Msa0216850 | Msa0881530 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0216850 | Msa0982090 | 0.821864 | 3.218953e-53 | -8.615850e-47 |
| Msa0216850 | Msa1085610 | 0.809796 | 1.585399e-50 | -8.615850e-47 |
| Msa0216850 | Msa1176170 | -0.810935 | 8.998273e-51 | -8.615850e-47 |
| Msa0216850 | Msa1183140 | -0.838602 | 2.608717e-57 | -8.615850e-47 |
| Msa0216850 | Msa1229480 | -0.804893 | 1.736113e-49 | -8.615850e-47 |
| Msa0216850 | Msa1277410 | -0.809269 | 2.056796e-50 | -8.615850e-47 |
| Msa0216850 | Msa1307160 | -0.827087 | 1.899021e-54 | -8.615850e-47 |
| Msa0216850 | Msa1307180 | -0.823566 | 1.292521e-53 | -8.615850e-47 |
| Msa0216850 | Msa1309760 | -0.812214 | 4.744263e-51 | -8.615850e-47 |
| Msa0216850 | Msa1316360 | -0.826553 | 2.547353e-54 | -8.615850e-47 |
| Msa0216850 | Msa1382380 | 0.824053 | 9.942981e-54 | -8.615850e-47 |
| Msa0216850 | Msa1395730 | -0.805173 | 1.516647e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216850 | MtrunA17_Chr2g0318441 | 95.719 | 327 | 14 | 0 | 1 | 327 | 1 | 327 | 0.0 | 596 |
| Msa0216850 | MtrunA17_Chr6g0457251 | 31.928 | 166 | 110 | 2 | 144 | 306 | 206 | 371 | 6.72e-20 | 89.7 |
| Msa0216850 | MtrunA17_Chr6g0472501 | 31.677 | 161 | 104 | 3 | 133 | 292 | 94 | 249 | 5.59e-13 | 68.6 |
| Msa0216850 | MtrunA17_Chr2g0332941 | 29.452 | 146 | 96 | 3 | 151 | 290 | 103 | 247 | 2.69e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216850 | AT1G25290.2 | 58.528 | 299 | 116 | 2 | 23 | 313 | 25 | 323 | 8.96e-122 | 353 |
| Msa0216850 | AT1G25290.1 | 56.863 | 306 | 117 | 3 | 23 | 313 | 25 | 330 | 1.83e-118 | 345 |
| Msa0216850 | AT5G38510.2 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.99e-17 | 81.3 |
| Msa0216850 | AT5G38510.3 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.99e-17 | 81.3 |
| Msa0216850 | AT5G38510.1 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.99e-17 | 81.3 |
| Msa0216850 | AT1G77860.1 | 32.558 | 172 | 107 | 5 | 142 | 310 | 111 | 276 | 2.59e-15 | 76.3 |
| Msa0216850 | AT1G77860.2 | 32.558 | 172 | 107 | 5 | 142 | 310 | 111 | 276 | 2.97e-15 | 76.3 |
| Msa0216850 | AT1G63120.1 | 30.380 | 158 | 106 | 3 | 151 | 305 | 104 | 260 | 4.01e-13 | 69.3 |
| Msa0216850 | AT5G07250.1 | 32.168 | 143 | 95 | 2 | 149 | 290 | 126 | 267 | 1.99e-12 | 67.8 |
| Msa0216850 | AT2G29050.1 | 30.719 | 153 | 102 | 3 | 147 | 296 | 119 | 270 | 2.75e-12 | 67.4 |
| Msa0216850 | AT1G52580.1 | 31.034 | 145 | 90 | 3 | 145 | 283 | 94 | 234 | 5.27e-12 | 66.2 |
| Msa0216850 | AT1G12750.4 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
| Msa0216850 | AT1G12750.7 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
| Msa0216850 | AT1G12750.6 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
| Msa0216850 | AT1G12750.3 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
| Msa0216850 | AT1G12750.1 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.76e-12 | 65.5 |
Find 114 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCACATTATAGTTCATTT+TGG | 0.165320 | 2_1:-63035188 | None:intergenic |
| GTCCACTTCCTTCCATTAAA+TGG | 0.175610 | 2_1:-63032145 | None:intergenic |
| ACATAAGTTAAAGGGGTTTC+AGG | 0.225941 | 2_1:-63035070 | None:intergenic |
| GTATTTCTCATGCAGCTTAT+TGG | 0.251876 | 2_1:+63033788 | Msa0216850:intron |
| TATTTCTCATGCAGCTTATT+GGG | 0.272605 | 2_1:+63033789 | Msa0216850:intron |
| AGTGGGACCAACTGAATTTA+AGG | 0.276075 | 2_1:-63032888 | None:intergenic |
| AAGTATGCAACATAAGTTAA+AGG | 0.285351 | 2_1:-63035079 | None:intergenic |
| ATTGCTGCATCATGGCTTAT+TGG | 0.290926 | 2_1:+63034799 | Msa0216850:CDS |
| GAAACATTTCATCGGCCTAT+TGG | 0.295999 | 2_1:+63034933 | Msa0216850:exon |
| TGTTTAGATTGAAGGATAAA+TGG | 0.318157 | 2_1:+63031969 | Msa0216850:CDS |
| CATCAACTGGCATTGACAAC+TGG | 0.321814 | 2_1:+63033816 | Msa0216850:CDS |
| ACCATTCAAATATTCTCTTA+AGG | 0.329000 | 2_1:-63035036 | None:intergenic |
| TGCTCCCGTGTTTAGATTGA+AGG | 0.329417 | 2_1:+63031961 | Msa0216850:CDS |
| GCATTTCCAGAGCTGGCTTC+AGG | 0.332234 | 2_1:-63032097 | None:intergenic |
| GGGAGACACGGTGGCTGAAA+TGG | 0.347067 | 2_1:-63031091 | None:intergenic |
| CAGGTGCAGCTATGAGTTAT+TGG | 0.355414 | 2_1:+63033053 | Msa0216850:intron |
| AGTATGCAACATAAGTTAAA+GGG | 0.361682 | 2_1:-63035078 | None:intergenic |
| TTTCTCCAGATTCATTGTTT+CGG | 0.366404 | 2_1:-63035310 | None:intergenic |
| CCCACTGTGGAGAGCTTTAG+TGG | 0.376144 | 2_1:+63032905 | Msa0216850:CDS |
| AATTCAATCCTTTGAGTTGA+AGG | 0.377772 | 2_1:-63032003 | None:intergenic |
| CCATTCAAATATTCTCTTAA+GGG | 0.378361 | 2_1:-63035035 | None:intergenic |
| ACAAGTAATTGCCCTCAATA+TGG | 0.389857 | 2_1:+63033424 | Msa0216850:CDS |
| AACATCCGAAACAATGAATC+TGG | 0.390173 | 2_1:+63035305 | Msa0216850:three_prime_UTR |
| CATGAATCCACATCTTTAGA+TGG | 0.393473 | 2_1:+63034835 | Msa0216850:CDS |
| TGCAAATATTGGACACCTAA+TGG | 0.395874 | 2_1:+63032769 | Msa0216850:CDS |
| AGATTCATTGTTTCGGATGT+TGG | 0.399746 | 2_1:-63035303 | None:intergenic |
| TCTACTTCGTTCCTGTCTCC+AGG | 0.414096 | 2_1:+63031133 | Msa0216850:CDS |
| CCCACCTGGATGCACCGCTC+CGG | 0.417368 | 2_1:+63035259 | Msa0216850:three_prime_UTR |
| CTTATTGGGTTATCATCAAC+TGG | 0.417736 | 2_1:+63033803 | Msa0216850:CDS |
| TCTTAAGGGAAGCTTACAAC+AGG | 0.420919 | 2_1:-63035021 | None:intergenic |
| GAAATGGAGGGACGCGGCGG+TGG | 0.422096 | 2_1:-63031075 | None:intergenic |
| TTTCAGTTAGGAGGCTTGAT+TGG | 0.428722 | 2_1:+63034772 | Msa0216850:intron |
| ATCTTGAAGAGATTATATAT+TGG | 0.429421 | 2_1:-63034883 | None:intergenic |
| CTGTCACCGGTTTGCAAGGT+GGG | 0.434972 | 2_1:+63031029 | Msa0216850:CDS |
| TGTTTCTATTTCCATGGCTT+AGG | 0.437025 | 2_1:-63034916 | None:intergenic |
| CCCACGACAAAAGCTTGCCT+TGG | 0.437216 | 2_1:-63032592 | None:intergenic |
| CATAAGTTAAAGGGGTTTCA+GGG | 0.437219 | 2_1:-63035069 | None:intergenic |
| TGAGTCGGCATTTCCAGAGC+TGG | 0.439376 | 2_1:-63032104 | None:intergenic |
| CCACCCGGAGCGGTGCATCC+AGG | 0.442660 | 2_1:-63035263 | None:intergenic |
| TTGCAAACCGGTGACAGAAA+TGG | 0.444522 | 2_1:-63031023 | None:intergenic |
| GCTTGCGCTTGTAATCCAAT+AGG | 0.449056 | 2_1:-63034948 | None:intergenic |
| CCACCTGGATGCACCGCTCC+GGG | 0.451604 | 2_1:+63035260 | Msa0216850:three_prime_UTR |
| TTAAGGCACAAAGACCTTGT+AGG | 0.451701 | 2_1:+63033371 | Msa0216850:CDS |
| ATGCCTGCAGTAGGTGCGTC+AGG | 0.452126 | 2_1:+63033085 | Msa0216850:CDS |
| AACCGGTGACAGAAATGGCT+TGG | 0.460775 | 2_1:-63031018 | None:intergenic |
| CCCTTAAGAGAATATTTGAA+TGG | 0.461614 | 2_1:+63035035 | Msa0216850:three_prime_UTR |
| GGAAGACCTGAAGCCAGCTC+TGG | 0.461947 | 2_1:+63032091 | Msa0216850:CDS |
| GCGGTGCATCCAGGTGGGAT+TGG | 0.462658 | 2_1:-63035254 | None:intergenic |
| TATCTTCAATTGTCAAGTGA+TGG | 0.464338 | 2_1:+63032025 | Msa0216850:CDS |
| GCCCAAGCCATTTCTGTCAC+CGG | 0.466220 | 2_1:+63031016 | Msa0216850:CDS |
| ATGAAATGTTTCTATTTCCA+TGG | 0.474316 | 2_1:-63034922 | None:intergenic |
| CCACGACAAAAGCTTGCCTT+GGG | 0.477575 | 2_1:-63032591 | None:intergenic |
| GGTTTAGGTTGGATCGGTTG+CGG | 0.482114 | 2_1:+63033340 | Msa0216850:intron |
| ATCAACTGGCATTGACAACT+GGG | 0.484122 | 2_1:+63033817 | Msa0216850:CDS |
| ATCTTCAATTGTCAAGTGAT+GGG | 0.485198 | 2_1:+63032026 | Msa0216850:CDS |
| ACCGGTGACAGAAATGGCTT+GGG | 0.501021 | 2_1:-63031017 | None:intergenic |
| CAGTTAGGAGGCTTGATTGG+TGG | 0.501779 | 2_1:+63034775 | Msa0216850:intron |
| TGTTACTCCTTAAATTCAGT+TGG | 0.501810 | 2_1:+63032881 | Msa0216850:CDS |
| TAAGGACCCACCTTGCAAAC+CGG | 0.514465 | 2_1:-63031035 | None:intergenic |
| GTAGAAAGTGAAGGCGGAGA+CGG | 0.519386 | 2_1:-63031115 | None:intergenic |
| ATGAGACACTTACCATATTG+AGG | 0.528872 | 2_1:-63033436 | None:intergenic |
| ATCCATTTAATGGAAGGAAG+TGG | 0.533831 | 2_1:+63032143 | Msa0216850:CDS |
| GGCGGAGACGGTGGGAGACA+CGG | 0.537970 | 2_1:-63031103 | None:intergenic |
| TCATTGACAAAGGACAACTT+TGG | 0.538888 | 2_1:+63032720 | Msa0216850:CDS |
| ATTTCTGTCACCGGTTTGCA+AGG | 0.538917 | 2_1:+63031025 | Msa0216850:CDS |
| GTGGATTCATGCTTCCATGC+AGG | 0.542563 | 2_1:-63034823 | None:intergenic |
| GAAAGTGAAGGCGGAGACGG+TGG | 0.544225 | 2_1:-63031112 | None:intergenic |
| TTGGTGGAATTGCTGCATCA+TGG | 0.545395 | 2_1:+63034791 | Msa0216850:CDS |
| GCTCCTGACGCACCTACTGC+AGG | 0.547227 | 2_1:-63033088 | None:intergenic |
| TGTAATGGTTTAGGTTGGAT+CGG | 0.547688 | 2_1:+63033334 | Msa0216850:intron |
| GCAATGATATCAAGTGGGTA+AGG | 0.550443 | 2_1:-63031053 | None:intergenic |
| TAAATTGCAAGATATCTTCG+AGG | 0.552516 | 2_1:-63032929 | None:intergenic |
| CACAAAGACCTTGTAGGAGG+TGG | 0.557075 | 2_1:+63033377 | Msa0216850:CDS |
| TCTTCTTCCATCTAAAGATG+TGG | 0.558989 | 2_1:-63034842 | None:intergenic |
| TGAGACACTTACCATATTGA+GGG | 0.563701 | 2_1:-63033435 | None:intergenic |
| CCCGGAGCGGTGCATCCAGG+TGG | 0.563975 | 2_1:-63035260 | None:intergenic |
| TTAAGAGAATATTTGAATGG+TGG | 0.565446 | 2_1:+63035038 | Msa0216850:three_prime_UTR |
| CCTGGATGCACCGCTCCGGG+TGG | 0.566387 | 2_1:+63035263 | Msa0216850:three_prime_UTR |
| CAAAGATGCCTTCAACTCAA+AGG | 0.568006 | 2_1:+63031995 | Msa0216850:CDS |
| CTCACAAAACATTGGCAGCA+AGG | 0.571689 | 2_1:-63032177 | None:intergenic |
| AGACACGGTGGCTGAAATGG+AGG | 0.574356 | 2_1:-63031088 | None:intergenic |
| CTGGATGCACCGCTCCGGGT+GGG | 0.583511 | 2_1:+63035264 | Msa0216850:three_prime_UTR |
| TCTGTCACCGGTTTGCAAGG+TGG | 0.583568 | 2_1:+63031028 | Msa0216850:CDS |
| CCACTAAAGCTCTCCACAGT+GGG | 0.584557 | 2_1:-63032905 | None:intergenic |
| TGGAAATAGAAACATTTCAT+CGG | 0.586800 | 2_1:+63034925 | Msa0216850:exon |
| GTGGCTGAAATGGAGGGACG+CGG | 0.589774 | 2_1:-63031081 | None:intergenic |
| GTTGCGCAACTTGCAACCCA+AGG | 0.593062 | 2_1:+63032575 | Msa0216850:CDS |
| GACACGGTGGCTGAAATGGA+GGG | 0.603040 | 2_1:-63031087 | None:intergenic |
| TTATCCTTCAATCTAAACAC+GGG | 0.608819 | 2_1:-63031965 | None:intergenic |
| TGCTCATACTCACAAAACAT+TGG | 0.609078 | 2_1:-63032185 | None:intergenic |
| CATGGCTTATTGGACCTGCA+TGG | 0.609641 | 2_1:+63034809 | Msa0216850:CDS |
| GTATGCAACATAAGTTAAAG+GGG | 0.609786 | 2_1:-63035077 | None:intergenic |
| GCGGTTACTTGCAATTGATG+AGG | 0.613032 | 2_1:-63032957 | None:intergenic |
| TTACGAGAGGACCTAAGCCA+TGG | 0.618911 | 2_1:+63034905 | Msa0216850:CDS |
| CCGGAGCGGTGCATCCAGGT+GGG | 0.620667 | 2_1:-63035259 | None:intergenic |
| GCGGTGGCAATGATATCAAG+TGG | 0.623394 | 2_1:-63031059 | None:intergenic |
| ACCCAAAATGAACTATAATG+TGG | 0.625351 | 2_1:+63035186 | Msa0216850:three_prime_UTR |
| AATGATGTTGAATTCCCACC+CGG | 0.626961 | 2_1:-63035278 | None:intergenic |
| AGGCACAAAGACCTTGTAGG+AGG | 0.629028 | 2_1:+63033374 | Msa0216850:CDS |
| GTAAACAGTCTCATTGACAA+AGG | 0.638755 | 2_1:+63032710 | Msa0216850:CDS |
| GCTGAAATGGAGGGACGCGG+CGG | 0.649712 | 2_1:-63031078 | None:intergenic |
| TTTATCCTTCAATCTAAACA+CGG | 0.650319 | 2_1:-63031966 | None:intergenic |
| CTTAAGGGAAGCTTACAACA+GGG | 0.652533 | 2_1:-63035020 | None:intergenic |
| AAAGTGAAGGCGGAGACGGT+GGG | 0.654962 | 2_1:-63031111 | None:intergenic |
| CGGTGGCAATGATATCAAGT+GGG | 0.662467 | 2_1:-63031058 | None:intergenic |
| AACGAAGTAGAAAGTGAAGG+CGG | 0.666662 | 2_1:-63031121 | None:intergenic |
| AGGAACGAAGTAGAAAGTGA+AGG | 0.668444 | 2_1:-63031124 | None:intergenic |
| TGTTGAATTCCCACCCGGAG+CGG | 0.669454 | 2_1:-63035273 | None:intergenic |
| AATCTCTTCAAGATTACGAG+AGG | 0.669871 | 2_1:+63034892 | Msa0216850:CDS |
| TTCTGCAAAATGCCTGCAGT+AGG | 0.702369 | 2_1:+63033076 | Msa0216850:CDS |
| AAATTCAGTTGGTCCCACTG+TGG | 0.708926 | 2_1:+63032892 | Msa0216850:CDS |
| GGAGACGGTGGGAGACACGG+TGG | 0.711069 | 2_1:-63031100 | None:intergenic |
| ACCACTAAAGCTCTCCACAG+TGG | 0.711367 | 2_1:-63032906 | None:intergenic |
| TCAACTGGCATTGACAACTG+GGG | 0.722807 | 2_1:+63033818 | Msa0216850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTTTTAAAA+TGG | - | chr2_1:63033205-63033224 | None:intergenic | 0.0% |
| !!! | TATATTTTTTCTTCTTATTT+AGG | + | chr2_1:63033619-63033638 | Msa0216850:intron | 10.0% |
| !! | TAAGAAAATGAAAAATTTAA+GGG | - | chr2_1:63033887-63033906 | None:intergenic | 10.0% |
| !!! | TTAATGTTGATGATTAAAAT+GGG | + | chr2_1:63031328-63031347 | Msa0216850:intron | 15.0% |
| !!! | AAAGTAAAATTGTTTTTGTA+TGG | + | chr2_1:63031411-63031430 | Msa0216850:intron | 15.0% |
| !!! | AAGTAAAATTGTTTTTGTAT+GGG | + | chr2_1:63031412-63031431 | Msa0216850:intron | 15.0% |
| !!! | ATTATGGAATTAGAATATTT+TGG | - | chr2_1:63033022-63033041 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAAATGGTTCA+GGG | - | chr2_1:63033198-63033217 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTAAAATGGTTC+AGG | - | chr2_1:63033199-63033218 | None:intergenic | 15.0% |
| !! | CTAAGAAAATGAAAAATTTA+AGG | - | chr2_1:63033888-63033907 | None:intergenic | 15.0% |
| !!! | TTTATTCACTTTTTAAAATG+TGG | + | chr2_1:63033967-63033986 | Msa0216850:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAT+TGG | - | chr2_1:63034186-63034205 | None:intergenic | 15.0% |
| !! | AAATTGCAAAAATTTAGACT+TGG | + | chr2_1:63031184-63031203 | Msa0216850:intron | 20.0% |
| !!! | TAGTTATATTTTCCTCATTT+AGG | + | chr2_1:63031232-63031251 | Msa0216850:intron | 20.0% |
| !!! | GTTAATGTTGATGATTAAAA+TGG | + | chr2_1:63031327-63031346 | Msa0216850:intron | 20.0% |
| !! | ATGATACAATCACTTAATTA+AGG | - | chr2_1:63031588-63031607 | None:intergenic | 20.0% |
| !!! | TTTTTATTAGTTCTCTATGA+TGG | - | chr2_1:63031697-63031716 | None:intergenic | 20.0% |
| !!! | AAATACTTGTTAGATTGTTT+GGG | - | chr2_1:63031815-63031834 | None:intergenic | 20.0% |
| !!! | TAAATACTTGTTAGATTGTT+TGG | - | chr2_1:63031816-63031835 | None:intergenic | 20.0% |
| !!! | ATCATTGATTAACAAATCAA+AGG | - | chr2_1:63032356-63032375 | None:intergenic | 20.0% |
| !!! | TTTTAATACAAAACTAAACC+AGG | - | chr2_1:63032835-63032854 | None:intergenic | 20.0% |
| !! | TATTGTAGGAATAATATAAG+CGG | - | chr2_1:63032979-63032998 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAAAATGGTTCAG+GGG | - | chr2_1:63033197-63033216 | None:intergenic | 20.0% |
| !! | TTATTTAGGAAATGTTTGTT+CGG | + | chr2_1:63033633-63033652 | Msa0216850:intron | 20.0% |
| !!! | AATAAATGAGGGTATAATAA+TGG | - | chr2_1:63034252-63034271 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | - | chr2_1:63034347-63034366 | None:intergenic | 20.0% |
| !! | CTGAAAAATGTATATGTTAA+TGG | - | chr2_1:63034758-63034777 | None:intergenic | 20.0% |
| !!! | AACATATACATTTTTCAGTT+AGG | + | chr2_1:63034760-63034779 | Msa0216850:intron | 20.0% |
| !! | ATCTTGAAGAGATTATATAT+TGG | - | chr2_1:63034886-63034905 | None:intergenic | 20.0% |
| !!! | AAGAAGCCAATTTTTTTTTG+CGG | + | chr2_1:63030966-63030985 | Msa0216850:five_prime_UTR | 25.0% |
| ! | TTCTTTCTATAACCTAAATG+AGG | - | chr2_1:63031247-63031266 | None:intergenic | 25.0% |
| ! | ATAGAAAGAAACCATTGAAA+TGG | + | chr2_1:63031257-63031276 | Msa0216850:intron | 25.0% |
| ! | ACTTAAATACTCCATTTCAA+TGG | - | chr2_1:63031271-63031290 | None:intergenic | 25.0% |
| !! | TTGATGATTAAAATGGGAAT+AGG | + | chr2_1:63031334-63031353 | Msa0216850:intron | 25.0% |
| ! | AATTAAGGATATGTTTGGAT+TGG | - | chr2_1:63031573-63031592 | None:intergenic | 25.0% |
| ! | CACTTAATTAAGGATATGTT+TGG | - | chr2_1:63031578-63031597 | None:intergenic | 25.0% |
| ! | TTTATCCTTCAATCTAAACA+CGG | - | chr2_1:63031969-63031988 | None:intergenic | 25.0% |
| ! | TGTTTAGATTGAAGGATAAA+TGG | + | chr2_1:63031969-63031988 | Msa0216850:CDS | 25.0% |
| !!! | GCTAGTTTCTCTTTTTTTAA+TGG | + | chr2_1:63032067-63032086 | Msa0216850:CDS | 25.0% |
| !!! | AGTTTCTCTTTTTTTAATGG+AGG | + | chr2_1:63032070-63032089 | Msa0216850:CDS | 25.0% |
| ! | TCCAGAAAAAATCCATTTAA+TGG | + | chr2_1:63032133-63032152 | Msa0216850:CDS | 25.0% |
| !!! | TCCATTAAATGGATTTTTTC+TGG | - | chr2_1:63032137-63032156 | None:intergenic | 25.0% |
| ! | GAAAAAATCCATTTAATGGA+AGG | + | chr2_1:63032137-63032156 | Msa0216850:CDS | 25.0% |
| ! | AAACTTAATACACCAATCAA+GGG | - | chr2_1:63032215-63032234 | None:intergenic | 25.0% |
| ! | TAAACTTAATACACCAATCA+AGG | - | chr2_1:63032216-63032235 | None:intergenic | 25.0% |
| ! | AGTGAAAAGAAAGAAAAACA+AGG | + | chr2_1:63032279-63032298 | Msa0216850:intron | 25.0% |
| ! | GTGAAAAGAAAGAAAAACAA+GGG | + | chr2_1:63032280-63032299 | Msa0216850:intron | 25.0% |
| ! | CAGAAAAATGAAGAGAAAAA+TGG | - | chr2_1:63032451-63032470 | None:intergenic | 25.0% |
| !! | GTATCTAAAATTGTGAAAAG+AGG | - | chr2_1:63032499-63032518 | None:intergenic | 25.0% |
| ! | TTAATTCAAATCCTACCATT+AGG | - | chr2_1:63032787-63032806 | None:intergenic | 25.0% |
| !!! | ATTAGAATATTTTGGAGGTA+AGG | - | chr2_1:63033014-63033033 | None:intergenic | 25.0% |
| !!! | ATGGAATTAGAATATTTTGG+AGG | - | chr2_1:63033019-63033038 | None:intergenic | 25.0% |
| !! | TCCATAATTTCTAGAAAATC+AGG | + | chr2_1:63033034-63033053 | Msa0216850:intron | 25.0% |
| !!! | ACCTGATTTTCTAGAAATTA+TGG | - | chr2_1:63033038-63033057 | None:intergenic | 25.0% |
| ! | GACTTGTATCAAGTAAAATA+AGG | - | chr2_1:63033175-63033194 | None:intergenic | 25.0% |
| !! | AGTTTTCTATCTTCTCTATA+TGG | - | chr2_1:63033270-63033289 | None:intergenic | 25.0% |
| ! | AAAACAGTGAAGAAAGATAA+AGG | - | chr2_1:63033304-63033323 | None:intergenic | 25.0% |
| ! | TAAGTTGTTTATCTTAGTTG+AGG | - | chr2_1:63034043-63034062 | None:intergenic | 25.0% |
| ! | GGATGAAATTCAATAAATGA+GGG | - | chr2_1:63034263-63034282 | None:intergenic | 25.0% |
| ! | TGGATGAAATTCAATAAATG+AGG | - | chr2_1:63034264-63034283 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr2_1:63034294-63034313 | Msa0216850:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr2_1:63034295-63034314 | Msa0216850:intron | 25.0% |
| ! | CTCTAAATAATAGTCGTTTA+AGG | - | chr2_1:63034395-63034414 | None:intergenic | 25.0% |
| ! | AAACGACTATTATTTAGAGA+CGG | + | chr2_1:63034396-63034415 | Msa0216850:intron | 25.0% |
| ! | TAAACACTTATGAAACTGTT+TGG | - | chr2_1:63034527-63034546 | None:intergenic | 25.0% |
| !!! | AAAATGGATAGTCTTATACA+CGG | - | chr2_1:63034644-63034663 | None:intergenic | 25.0% |
| !!! | ATCCATTTTGTTATGTATGT+AGG | + | chr2_1:63034655-63034674 | Msa0216850:intron | 25.0% |
| !!! | ATATACATTTTTCAGTTAGG+AGG | + | chr2_1:63034763-63034782 | Msa0216850:intron | 25.0% |
| !! | ATGAAATGTTTCTATTTCCA+TGG | - | chr2_1:63034925-63034944 | None:intergenic | 25.0% |
| ! | TGGAAATAGAAACATTTCAT+CGG | + | chr2_1:63034925-63034944 | Msa0216850:exon | 25.0% |
| ! | CCATTCAAATATTCTCTTAA+GGG | - | chr2_1:63035038-63035057 | None:intergenic | 25.0% |
| ! | ACCATTCAAATATTCTCTTA+AGG | - | chr2_1:63035039-63035058 | None:intergenic | 25.0% |
| ! | TTAAGAGAATATTTGAATGG+TGG | + | chr2_1:63035038-63035057 | Msa0216850:three_prime_UTR | 25.0% |
| ! | AGTATGCAACATAAGTTAAA+GGG | - | chr2_1:63035081-63035100 | None:intergenic | 25.0% |
| ! | AAGTATGCAACATAAGTTAA+AGG | - | chr2_1:63035082-63035101 | None:intergenic | 25.0% |
| TTATCTACTGACATAAGCAA+TGG | - | chr2_1:63031539-63031558 | None:intergenic | 30.0% | |
| CTAACAAGTATTTATGACAG+TGG | + | chr2_1:63031822-63031841 | Msa0216850:intron | 30.0% | |
| TTATCCTTCAATCTAAACAC+GGG | - | chr2_1:63031968-63031987 | None:intergenic | 30.0% | |
| !! | AATTCAATCCTTTGAGTTGA+AGG | - | chr2_1:63032006-63032025 | None:intergenic | 30.0% |
| TATCTTCAATTGTCAAGTGA+TGG | + | chr2_1:63032025-63032044 | Msa0216850:CDS | 30.0% | |
| ATCTTCAATTGTCAAGTGAT+GGG | + | chr2_1:63032026-63032045 | Msa0216850:CDS | 30.0% | |
| GTTTATGACTTCCTAGAATT+TGG | + | chr2_1:63032231-63032250 | Msa0216850:intron | 30.0% | |
| ! | TTACACTTCACTCATTTTAG+AGG | - | chr2_1:63032259-63032278 | None:intergenic | 30.0% |
| CAGTACAAACTATTCAAATC+CGG | - | chr2_1:63032428-63032447 | None:intergenic | 30.0% | |
| ! | TCACAATTTTAGATACCTCT+TGG | + | chr2_1:63032503-63032522 | Msa0216850:intron | 30.0% |
| AATAGATATGATCTGTGTTG+TGG | + | chr2_1:63032651-63032670 | Msa0216850:intron | 30.0% | |
| ! | TCTTTTCTGCATGCAAATAT+TGG | + | chr2_1:63032758-63032777 | Msa0216850:CDS | 30.0% |
| TGTTACTCCTTAAATTCAGT+TGG | + | chr2_1:63032881-63032900 | Msa0216850:CDS | 30.0% | |
| TAAATTGCAAGATATCTTCG+AGG | - | chr2_1:63032932-63032951 | None:intergenic | 30.0% | |
| TCTATATGGAAAACCAAGAT+AGG | - | chr2_1:63033256-63033275 | None:intergenic | 30.0% | |
| ! | GTTTTTCTAATGAGCTGTAA+TGG | + | chr2_1:63033319-63033338 | Msa0216850:intron | 30.0% |
| TATGGTTGTGACTTATAGAT+GGG | + | chr2_1:63033726-63033745 | Msa0216850:intron | 30.0% | |
| TATTTCTCATGCAGCTTATT+GGG | + | chr2_1:63033789-63033808 | Msa0216850:intron | 30.0% | |
| AAGAGACAATTATTGTGAGA+TGG | - | chr2_1:63034161-63034180 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr2_1:63034298-63034317 | None:intergenic | 30.0% | |
| TCAAAAAAGTCAATCCAAAC+AGG | + | chr2_1:63034561-63034580 | Msa0216850:intron | 30.0% | |
| ATACACGGAATACAAAATTG+AGG | - | chr2_1:63034629-63034648 | None:intergenic | 30.0% | |
| TGCCTACATACATAACAAAA+TGG | - | chr2_1:63034660-63034679 | None:intergenic | 30.0% | |
| CCCTTAAGAGAATATTTGAA+TGG | + | chr2_1:63035035-63035054 | Msa0216850:three_prime_UTR | 30.0% | |
| GTATGCAACATAAGTTAAAG+GGG | - | chr2_1:63035080-63035099 | None:intergenic | 30.0% | |
| !! | TTGCATACTTTTGTTGTACA+TGG | + | chr2_1:63035092-63035111 | Msa0216850:three_prime_UTR | 30.0% |
| !! | TGCATACTTTTGTTGTACAT+GGG | + | chr2_1:63035093-63035112 | Msa0216850:three_prime_UTR | 30.0% |
| AAAAATCATCCATACAAGCA+AGG | - | chr2_1:63035145-63035164 | None:intergenic | 30.0% | |
| !!! | TGCTTGTATGGATGATTTTT+TGG | + | chr2_1:63035145-63035164 | Msa0216850:three_prime_UTR | 30.0% |
| !!! | GCTTGTATGGATGATTTTTT+GGG | + | chr2_1:63035146-63035165 | Msa0216850:three_prime_UTR | 30.0% |
| !!! | ATAGTTCATTTTGGGTTGTA+GGG | - | chr2_1:63035182-63035201 | None:intergenic | 30.0% |
| !!! | TATAGTTCATTTTGGGTTGT+AGG | - | chr2_1:63035183-63035202 | None:intergenic | 30.0% |
| ACCCAAAATGAACTATAATG+TGG | + | chr2_1:63035186-63035205 | Msa0216850:three_prime_UTR | 30.0% | |
| ! | GCCACATTATAGTTCATTTT+GGG | - | chr2_1:63035190-63035209 | None:intergenic | 30.0% |
| ! | TGCCACATTATAGTTCATTT+TGG | - | chr2_1:63035191-63035210 | None:intergenic | 30.0% |
| TTTCTCCAGATTCATTGTTT+CGG | - | chr2_1:63035313-63035332 | None:intergenic | 30.0% | |
| CCAGTTCCGCAAAAAAAAAT+TGG | - | chr2_1:63030975-63030994 | None:intergenic | 35.0% | |
| !!! | CCAATTTTTTTTTGCGGAAC+TGG | + | chr2_1:63030972-63030991 | Msa0216850:five_prime_UTR | 35.0% |
| GAGTGAATAAAAAGAAGACC+TGG | - | chr2_1:63031154-63031173 | None:intergenic | 35.0% | |
| AATAGGAAGTAGCTCATGTT+TGG | + | chr2_1:63031351-63031370 | Msa0216850:intron | 35.0% | |
| !! | CTTGTTTTCACAAGCTATCT+TGG | + | chr2_1:63031441-63031460 | Msa0216850:intron | 35.0% |
| !! | TGTTTGGATTGGCTTATTTG+AGG | - | chr2_1:63031562-63031581 | None:intergenic | 35.0% |
| AAGAAAGAAGAGACACAAAC+GGG | - | chr2_1:63031878-63031897 | None:intergenic | 35.0% | |
| GAAGAAAGAAGAGACACAAA+CGG | - | chr2_1:63031879-63031898 | None:intergenic | 35.0% | |
| !! | CTCTTCTTTCTTCTGAAATC+TGG | + | chr2_1:63031886-63031905 | Msa0216850:intron | 35.0% |
| ! | TTTTCTGGACATCTTTGAGT+CGG | - | chr2_1:63032122-63032141 | None:intergenic | 35.0% |
| ATCCATTTAATGGAAGGAAG+TGG | + | chr2_1:63032143-63032162 | Msa0216850:CDS | 35.0% | |
| TGCTCATACTCACAAAACAT+TGG | - | chr2_1:63032188-63032207 | None:intergenic | 35.0% | |
| TATGAGCATATTCCCTTGAT+TGG | + | chr2_1:63032200-63032219 | Msa0216850:intron | 35.0% | |
| !! | TTTTAGAGGAGCCAAATTCT+AGG | - | chr2_1:63032245-63032264 | None:intergenic | 35.0% |
| AGAAAGCAAAGTGAGCATTA+TGG | - | chr2_1:63032379-63032398 | None:intergenic | 35.0% | |
| GTTGTGTTGTGTATGTTACT+AGG | + | chr2_1:63032688-63032707 | Msa0216850:intron | 35.0% | |
| GTAAACAGTCTCATTGACAA+AGG | + | chr2_1:63032710-63032729 | Msa0216850:CDS | 35.0% | |
| TCATTGACAAAGGACAACTT+TGG | + | chr2_1:63032720-63032739 | Msa0216850:CDS | 35.0% | |
| TGCAAATATTGGACACCTAA+TGG | + | chr2_1:63032769-63032788 | Msa0216850:CDS | 35.0% | |
| AATATTGGACACCTAATGGT+AGG | + | chr2_1:63032773-63032792 | Msa0216850:intron | 35.0% | |
| ! | GGAATTTCATTGGCTATTGT+AGG | - | chr2_1:63032993-63033012 | None:intergenic | 35.0% |
| TTGGAGGTAAGGAATTTCAT+TGG | - | chr2_1:63033003-63033022 | None:intergenic | 35.0% | |
| AAGATAGAAAACTGAGATGC+TGG | + | chr2_1:63033277-63033296 | Msa0216850:intron | 35.0% | |
| CTAATGAGCTGTAATGGTTT+AGG | + | chr2_1:63033325-63033344 | Msa0216850:intron | 35.0% | |
| !! | TGTAATGGTTTAGGTTGGAT+CGG | + | chr2_1:63033334-63033353 | Msa0216850:intron | 35.0% |
| ACAAGTAATTGCCCTCAATA+TGG | + | chr2_1:63033424-63033443 | Msa0216850:CDS | 35.0% | |
| TGAGACACTTACCATATTGA+GGG | - | chr2_1:63033438-63033457 | None:intergenic | 35.0% | |
| ATGAGACACTTACCATATTG+AGG | - | chr2_1:63033439-63033458 | None:intergenic | 35.0% | |
| !!! | TGTTAGTTTTGCAACTTCAC+TGG | + | chr2_1:63033485-63033504 | Msa0216850:intron | 35.0% |
| GTAAAATTTCTGTTCCACTG+TGG | - | chr2_1:63033555-63033574 | None:intergenic | 35.0% | |
| TAACTTAGACCATCACTCTA+TGG | + | chr2_1:63033708-63033727 | Msa0216850:intron | 35.0% | |
| CTATGGTTGTGACTTATAGA+TGG | + | chr2_1:63033725-63033744 | Msa0216850:intron | 35.0% | |
| TTTCCTTGTCTGTGTTCTAA+CGG | + | chr2_1:63033760-63033779 | Msa0216850:intron | 35.0% | |
| GTATTTCTCATGCAGCTTAT+TGG | + | chr2_1:63033788-63033807 | Msa0216850:intron | 35.0% | |
| CTTATTGGGTTATCATCAAC+TGG | + | chr2_1:63033803-63033822 | Msa0216850:CDS | 35.0% | |
| AAGGGCAGTAAAAAAATCCA+TGG | - | chr2_1:63033869-63033888 | None:intergenic | 35.0% | |
| CCTTTGTTCAGTAAAAGTTG+CGG | + | chr2_1:63033910-63033929 | Msa0216850:intron | 35.0% | |
| CTTTGTTCAGTAAAAGTTGC+GGG | + | chr2_1:63033911-63033930 | Msa0216850:intron | 35.0% | |
| !!! | TTTTAAAATGTGGCATGACC+TGG | + | chr2_1:63033977-63033996 | Msa0216850:intron | 35.0% |
| GACAATTATTGTGAGATGGA+GGG | - | chr2_1:63034157-63034176 | None:intergenic | 35.0% | |
| AGACAATTATTGTGAGATGG+AGG | - | chr2_1:63034158-63034177 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr2_1:63034284-63034303 | None:intergenic | 35.0% | |
| AGGTTTATGCACGGTTATTA+AGG | - | chr2_1:63034375-63034394 | None:intergenic | 35.0% | |
| ! | AGTCGTTTAAGGTTTATGCA+CGG | - | chr2_1:63034384-63034403 | None:intergenic | 35.0% |
| GACTATTATTTAGAGACGGA+GGG | + | chr2_1:63034400-63034419 | Msa0216850:intron | 35.0% | |
| TTTCTATCATGATGAGCTTG+TGG | + | chr2_1:63034448-63034467 | Msa0216850:intron | 35.0% | |
| AACAAGCTGATGACAACTTA+TGG | + | chr2_1:63034472-63034491 | Msa0216850:intron | 35.0% | |
| GAAACTGTTTGGAAGACTTA+TGG | - | chr2_1:63034516-63034535 | None:intergenic | 35.0% | |
| !! | ACATAGTTTTTAGGCCTGTT+TGG | - | chr2_1:63034578-63034597 | None:intergenic | 35.0% |
| AAACAGGCCTAAAAACTATG+TGG | + | chr2_1:63034577-63034596 | Msa0216850:intron | 35.0% | |
| ! | TCCATGTCCACATAGTTTTT+AGG | - | chr2_1:63034587-63034606 | None:intergenic | 35.0% |
| ! | TTTGTTATGTATGTAGGCAC+TGG | + | chr2_1:63034661-63034680 | Msa0216850:intron | 35.0% |
| AAACTATGCACAGATTACAC+TGG | - | chr2_1:63034715-63034734 | None:intergenic | 35.0% | |
| CATGAATCCACATCTTTAGA+TGG | + | chr2_1:63034835-63034854 | Msa0216850:CDS | 35.0% | |
| TCTTCTTCCATCTAAAGATG+TGG | - | chr2_1:63034845-63034864 | None:intergenic | 35.0% | |
| AATCTCTTCAAGATTACGAG+AGG | + | chr2_1:63034892-63034911 | Msa0216850:CDS | 35.0% | |
| ! | TGTTTCTATTTCCATGGCTT+AGG | - | chr2_1:63034919-63034938 | None:intergenic | 35.0% |
| CATAAGTTAAAGGGGTTTCA+GGG | - | chr2_1:63035072-63035091 | None:intergenic | 35.0% | |
| ACATAAGTTAAAGGGGTTTC+AGG | - | chr2_1:63035073-63035092 | None:intergenic | 35.0% | |
| !! | GCATACTTTTGTTGTACATG+GGG | + | chr2_1:63035094-63035113 | Msa0216850:three_prime_UTR | 35.0% |
| !! | GTTTGTTTTCCTTGCTTGTA+TGG | + | chr2_1:63035133-63035152 | Msa0216850:three_prime_UTR | 35.0% |
| !!! | ATGGATGATTTTTTGGGTCT+AGG | + | chr2_1:63035152-63035171 | Msa0216850:three_prime_UTR | 35.0% |
| !! | GTTTTTCAGAATGGTAACGA+AGG | - | chr2_1:63035235-63035254 | None:intergenic | 35.0% |
| AGATTCATTGTTTCGGATGT+TGG | - | chr2_1:63035306-63035325 | None:intergenic | 35.0% | |
| AACATCCGAAACAATGAATC+TGG | + | chr2_1:63035305-63035324 | Msa0216850:three_prime_UTR | 35.0% | |
| !!! | TTTTTTTGCGGAACTGGAGA+AGG | + | chr2_1:63030978-63030997 | Msa0216850:five_prime_UTR | 40.0% |
| !!! | TTTTTTGCGGAACTGGAGAA+GGG | + | chr2_1:63030979-63030998 | Msa0216850:five_prime_UTR | 40.0% |
| GCAATGATATCAAGTGGGTA+AGG | - | chr2_1:63031056-63031075 | None:intergenic | 40.0% | |
| AACGAAGTAGAAAGTGAAGG+CGG | - | chr2_1:63031124-63031143 | None:intergenic | 40.0% | |
| AGGAACGAAGTAGAAAGTGA+AGG | - | chr2_1:63031127-63031146 | None:intergenic | 40.0% | |
| TAAAAAGAAGACCTGGAGAC+AGG | - | chr2_1:63031147-63031166 | None:intergenic | 40.0% | |
| AGACTGTTTGAGAGAGCTTA+TGG | - | chr2_1:63031761-63031780 | None:intergenic | 40.0% | |
| AGAAAGAAGAGACACAAACG+GGG | - | chr2_1:63031877-63031896 | None:intergenic | 40.0% | |
| !! | CTTCTGAAATCTGGATGTTG+CGG | + | chr2_1:63031895-63031914 | Msa0216850:intron | 40.0% |
| CAAAGATGCCTTCAACTCAA+AGG | + | chr2_1:63031995-63032014 | Msa0216850:CDS | 40.0% | |
| GTCCACTTCCTTCCATTAAA+TGG | - | chr2_1:63032148-63032167 | None:intergenic | 40.0% | |
| AGTGGGACCAACTGAATTTA+AGG | - | chr2_1:63032891-63032910 | None:intergenic | 40.0% | |
| TCAAACGTACTTGTCTCTCT+TGG | + | chr2_1:63033227-63033246 | Msa0216850:intron | 40.0% | |
| TCTCTCTTGGATTCCTATCT+TGG | + | chr2_1:63033240-63033259 | Msa0216850:intron | 40.0% | |
| TGAGCTGTAATGGTTTAGGT+TGG | + | chr2_1:63033329-63033348 | Msa0216850:intron | 40.0% | |
| TTAAGGCACAAAGACCTTGT+AGG | + | chr2_1:63033371-63033390 | Msa0216850:CDS | 40.0% | |
| !!! | CTTTTTTACCACCTCCTACA+AGG | - | chr2_1:63033388-63033407 | None:intergenic | 40.0% |
| GCAGAATCAGAAGTAACACA+GGG | - | chr2_1:63033463-63033482 | None:intergenic | 40.0% | |
| AGCAGAATCAGAAGTAACAC+AGG | - | chr2_1:63033464-63033483 | None:intergenic | 40.0% | |
| !! | TTGTTCGGTAGAAGTGTTGT+TGG | + | chr2_1:63033648-63033667 | Msa0216850:intron | 40.0% |
| !! | AAGTGTTGTTGGTTCATGCA+AGG | + | chr2_1:63033659-63033678 | Msa0216850:intron | 40.0% |
| !! | AGTGTTGTTGGTTCATGCAA+GGG | + | chr2_1:63033660-63033679 | Msa0216850:intron | 40.0% |
| AAGTCACAACCATAGAGTGA+TGG | - | chr2_1:63033720-63033739 | None:intergenic | 40.0% | |
| !! | ATCAACTGGCATTGACAACT+GGG | + | chr2_1:63033817-63033836 | Msa0216850:CDS | 40.0% |
| ! | CCGCAACTTTTACTGAACAA+AGG | - | chr2_1:63033913-63033932 | None:intergenic | 40.0% |
| ! | CTCGAATTTAGAGTCATTCC+AGG | - | chr2_1:63033998-63034017 | None:intergenic | 40.0% |
| CGACTATTATTTAGAGACGG+AGG | + | chr2_1:63034399-63034418 | Msa0216850:intron | 40.0% | |
| GCCTAAAAACTATGTGGACA+TGG | + | chr2_1:63034583-63034602 | Msa0216850:intron | 40.0% | |
| TTTCAGTTAGGAGGCTTGAT+TGG | + | chr2_1:63034772-63034791 | Msa0216850:intron | 40.0% | |
| ATTGCTGCATCATGGCTTAT+TGG | + | chr2_1:63034799-63034818 | Msa0216850:CDS | 40.0% | |
| GAAACATTTCATCGGCCTAT+TGG | + | chr2_1:63034933-63034952 | Msa0216850:exon | 40.0% | |
| CTTAAGGGAAGCTTACAACA+GGG | - | chr2_1:63035023-63035042 | None:intergenic | 40.0% | |
| TCTTAAGGGAAGCTTACAAC+AGG | - | chr2_1:63035024-63035043 | None:intergenic | 40.0% | |
| !!! | GTGGGATTGGTTTTTCAGAA+TGG | - | chr2_1:63035244-63035263 | None:intergenic | 40.0% |
| AATGATGTTGAATTCCCACC+CGG | - | chr2_1:63035281-63035300 | None:intergenic | 40.0% | |
| TTGCAAACCGGTGACAGAAA+TGG | - | chr2_1:63031026-63031045 | None:intergenic | 45.0% | |
| !! | ATTTCTGTCACCGGTTTGCA+AGG | + | chr2_1:63031025-63031044 | Msa0216850:CDS | 45.0% |
| CGGTGGCAATGATATCAAGT+GGG | - | chr2_1:63031061-63031080 | None:intergenic | 45.0% | |
| CAAGAGAGACATGTGAGTCA+AGG | - | chr2_1:63031928-63031947 | None:intergenic | 45.0% | |
| TGCTCCCGTGTTTAGATTGA+AGG | + | chr2_1:63031961-63031980 | Msa0216850:CDS | 45.0% | |
| CTCACAAAACATTGGCAGCA+AGG | - | chr2_1:63032180-63032199 | None:intergenic | 45.0% | |
| CAATAAGCACTCTCACCAAG+AGG | - | chr2_1:63032521-63032540 | None:intergenic | 45.0% | |
| CAGGCATGACAGAACAAACT+TGG | - | chr2_1:63032816-63032835 | None:intergenic | 45.0% | |
| ! | CAAGTTTGTTCTGTCATGCC+TGG | + | chr2_1:63032814-63032833 | Msa0216850:intron | 45.0% |
| AAATTCAGTTGGTCCCACTG+TGG | + | chr2_1:63032892-63032911 | Msa0216850:CDS | 45.0% | |
| GCGGTTACTTGCAATTGATG+AGG | - | chr2_1:63032960-63032979 | None:intergenic | 45.0% | |
| CAGGTGCAGCTATGAGTTAT+TGG | + | chr2_1:63033053-63033072 | Msa0216850:intron | 45.0% | |
| TTCTGCAAAATGCCTGCAGT+AGG | + | chr2_1:63033076-63033095 | Msa0216850:CDS | 45.0% | |
| !!! | CGGTTGCGGTGTTTGTTTTA+AGG | + | chr2_1:63033354-63033373 | Msa0216850:CDS | 45.0% |
| AGTTATCACGAGACAGTGTG+TGG | + | chr2_1:63033512-63033531 | Msa0216850:intron | 45.0% | |
| ! | ATGCTTCTGATTAGCCACAG+TGG | + | chr2_1:63033538-63033557 | Msa0216850:intron | 45.0% |
| GGTTCATGCAAGGGTTATGT+CGG | + | chr2_1:63033669-63033688 | Msa0216850:intron | 45.0% | |
| GTTCATGCAAGGGTTATGTC+GGG | + | chr2_1:63033670-63033689 | Msa0216850:intron | 45.0% | |
| !! | CATCAACTGGCATTGACAAC+TGG | + | chr2_1:63033816-63033835 | Msa0216850:CDS | 45.0% |
| !! | TCAACTGGCATTGACAACTG+GGG | + | chr2_1:63033818-63033837 | Msa0216850:CDS | 45.0% |
| AACTGGGGACATGTAAGTGT+AGG | + | chr2_1:63033833-63033852 | Msa0216850:intron | 45.0% | |
| ! | GTGTAGGAGTGTATCATCCA+TGG | + | chr2_1:63033849-63033868 | Msa0216850:intron | 45.0% |
| TTGGTGGAATTGCTGCATCA+TGG | + | chr2_1:63034791-63034810 | Msa0216850:CDS | 45.0% | |
| GCTTGCGCTTGTAATCCAAT+AGG | - | chr2_1:63034951-63034970 | None:intergenic | 45.0% | |
| TCTGAAAAACCAATCCCACC+TGG | + | chr2_1:63035245-63035264 | Msa0216850:three_prime_UTR | 45.0% | |
| ACCGGTGACAGAAATGGCTT+GGG | - | chr2_1:63031020-63031039 | None:intergenic | 50.0% | |
| AACCGGTGACAGAAATGGCT+TGG | - | chr2_1:63031021-63031040 | None:intergenic | 50.0% | |
| TAAGGACCCACCTTGCAAAC+CGG | - | chr2_1:63031038-63031057 | None:intergenic | 50.0% | |
| GCGGTGGCAATGATATCAAG+TGG | - | chr2_1:63031062-63031081 | None:intergenic | 50.0% | |
| GTAGAAAGTGAAGGCGGAGA+CGG | - | chr2_1:63031118-63031137 | None:intergenic | 50.0% | |
| TCTACTTCGTTCCTGTCTCC+AGG | + | chr2_1:63031133-63031152 | Msa0216850:CDS | 50.0% | |
| GTTGCTCGCTTCAAATGAGC+CGG | + | chr2_1:63032406-63032425 | Msa0216850:intron | 50.0% | |
| CCACGACAAAAGCTTGCCTT+GGG | - | chr2_1:63032594-63032613 | None:intergenic | 50.0% | |
| ! | CCAAGGCAAGCTTTTGTCGT+GGG | + | chr2_1:63032592-63032611 | Msa0216850:CDS | 50.0% |
| ! | CAAGGCAAGCTTTTGTCGTG+GGG | + | chr2_1:63032593-63032612 | Msa0216850:CDS | 50.0% |
| CCACTAAAGCTCTCCACAGT+GGG | - | chr2_1:63032908-63032927 | None:intergenic | 50.0% | |
| ACCACTAAAGCTCTCCACAG+TGG | - | chr2_1:63032909-63032928 | None:intergenic | 50.0% | |
| ! | GGTGCGTCAGGAGCAATTTT+TGG | + | chr2_1:63033097-63033116 | Msa0216850:CDS | 50.0% |
| !! | GGTTTAGGTTGGATCGGTTG+CGG | + | chr2_1:63033340-63033359 | Msa0216850:intron | 50.0% |
| AGGCACAAAGACCTTGTAGG+AGG | + | chr2_1:63033374-63033393 | Msa0216850:CDS | 50.0% | |
| CACAAAGACCTTGTAGGAGG+TGG | + | chr2_1:63033377-63033396 | Msa0216850:CDS | 50.0% | |
| GCACCGTTAGAACACAGACA+AGG | - | chr2_1:63033766-63033785 | None:intergenic | 50.0% | |
| CAGTTAGGAGGCTTGATTGG+TGG | + | chr2_1:63034775-63034794 | Msa0216850:intron | 50.0% | |
| CATGGCTTATTGGACCTGCA+TGG | + | chr2_1:63034809-63034828 | Msa0216850:CDS | 50.0% | |
| GTGGATTCATGCTTCCATGC+AGG | - | chr2_1:63034826-63034845 | None:intergenic | 50.0% | |
| TTACGAGAGGACCTAAGCCA+TGG | + | chr2_1:63034905-63034924 | Msa0216850:CDS | 50.0% | |
| GCCCAAGCCATTTCTGTCAC+CGG | + | chr2_1:63031016-63031035 | Msa0216850:CDS | 55.0% | |
| !! | TCTGTCACCGGTTTGCAAGG+TGG | + | chr2_1:63031028-63031047 | Msa0216850:CDS | 55.0% |
| !! | CTGTCACCGGTTTGCAAGGT+GGG | + | chr2_1:63031029-63031048 | Msa0216850:CDS | 55.0% |
| GACACGGTGGCTGAAATGGA+GGG | - | chr2_1:63031090-63031109 | None:intergenic | 55.0% | |
| AGACACGGTGGCTGAAATGG+AGG | - | chr2_1:63031091-63031110 | None:intergenic | 55.0% | |
| AAAGTGAAGGCGGAGACGGT+GGG | - | chr2_1:63031114-63031133 | None:intergenic | 55.0% | |
| ! | GCATTTCCAGAGCTGGCTTC+AGG | - | chr2_1:63032100-63032119 | None:intergenic | 55.0% |
| TGAGTCGGCATTTCCAGAGC+TGG | - | chr2_1:63032107-63032126 | None:intergenic | 55.0% | |
| GTTGCGCAACTTGCAACCCA+AGG | + | chr2_1:63032575-63032594 | Msa0216850:CDS | 55.0% | |
| ! | CCCAAGGCAAGCTTTTGTCG+TGG | + | chr2_1:63032591-63032610 | Msa0216850:CDS | 55.0% |
| CCCACGACAAAAGCTTGCCT+TGG | - | chr2_1:63032595-63032614 | None:intergenic | 55.0% | |
| ! | GCTTTTGTCGTGGGGAGCAA+AGG | + | chr2_1:63032601-63032620 | Msa0216850:CDS | 55.0% |
| TGTCGTGGGGAGCAAAGGTA+AGG | + | chr2_1:63032606-63032625 | Msa0216850:intron | 55.0% | |
| ! | CCCACTGTGGAGAGCTTTAG+TGG | + | chr2_1:63032905-63032924 | Msa0216850:CDS | 55.0% |
| TGTTGAATTCCCACCCGGAG+CGG | - | chr2_1:63035276-63035295 | None:intergenic | 55.0% | |
| GTGGCTGAAATGGAGGGACG+CGG | - | chr2_1:63031084-63031103 | None:intergenic | 60.0% | |
| GGGAGACACGGTGGCTGAAA+TGG | - | chr2_1:63031094-63031113 | None:intergenic | 60.0% | |
| GAAAGTGAAGGCGGAGACGG+TGG | - | chr2_1:63031115-63031134 | None:intergenic | 60.0% | |
| GGAAGACCTGAAGCCAGCTC+TGG | + | chr2_1:63032091-63032110 | Msa0216850:CDS | 60.0% | |
| ATGCCTGCAGTAGGTGCGTC+AGG | + | chr2_1:63033085-63033104 | Msa0216850:CDS | 60.0% | |
| GCTGAAATGGAGGGACGCGG+CGG | - | chr2_1:63031081-63031100 | None:intergenic | 65.0% | |
| GCTCCTGACGCACCTACTGC+AGG | - | chr2_1:63033091-63033110 | None:intergenic | 65.0% | |
| GCGGTGCATCCAGGTGGGAT+TGG | - | chr2_1:63035257-63035276 | None:intergenic | 65.0% | |
| GAAATGGAGGGACGCGGCGG+TGG | - | chr2_1:63031078-63031097 | None:intergenic | 70.0% | |
| GGAGACGGTGGGAGACACGG+TGG | - | chr2_1:63031103-63031122 | None:intergenic | 70.0% | |
| GGCGGAGACGGTGGGAGACA+CGG | - | chr2_1:63031106-63031125 | None:intergenic | 70.0% | |
| CCGGAGCGGTGCATCCAGGT+GGG | - | chr2_1:63035262-63035281 | None:intergenic | 70.0% | |
| CCCACCTGGATGCACCGCTC+CGG | + | chr2_1:63035259-63035278 | Msa0216850:three_prime_UTR | 70.0% | |
| CCACCTGGATGCACCGCTCC+GGG | + | chr2_1:63035260-63035279 | Msa0216850:three_prime_UTR | 70.0% | |
| CTGGATGCACCGCTCCGGGT+GGG | + | chr2_1:63035264-63035283 | Msa0216850:three_prime_UTR | 70.0% | |
| CCCGGAGCGGTGCATCCAGG+TGG | - | chr2_1:63035263-63035282 | None:intergenic | 75.0% | |
| CCACCCGGAGCGGTGCATCC+AGG | - | chr2_1:63035266-63035285 | None:intergenic | 75.0% | |
| CCTGGATGCACCGCTCCGGG+TGG | + | chr2_1:63035263-63035282 | Msa0216850:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 63030943 | 63035344 | 63030943 | ID=Msa0216850;Name=Msa0216850 |
| chr2_1 | mRNA | 63030943 | 63035344 | 63030943 | ID=Msa0216850-mRNA-1;Parent=Msa0216850;Name=Msa0216850-mRNA-1;_AED=0.09;_eAED=0.09;_QI=65|1|1|1|1|1|9|411|327 |
| chr2_1 | exon | 63030943 | 63031154 | 63030943 | ID=Msa0216850-mRNA-1:exon:17494;Parent=Msa0216850-mRNA-1 |
| chr2_1 | exon | 63031956 | 63032194 | 63031956 | ID=Msa0216850-mRNA-1:exon:17495;Parent=Msa0216850-mRNA-1 |
| chr2_1 | exon | 63032568 | 63032622 | 63032568 | ID=Msa0216850-mRNA-1:exon:17496;Parent=Msa0216850-mRNA-1 |
| chr2_1 | exon | 63032710 | 63032790 | 63032710 | ID=Msa0216850-mRNA-1:exon:17497;Parent=Msa0216850-mRNA-1 |
| chr2_1 | exon | 63032875 | 63032971 | 63032875 | ID=Msa0216850-mRNA-1:exon:17498;Parent=Msa0216850-mRNA-1 |
| chr2_1 | exon | 63033056 | 63033123 | 63033056 | ID=Msa0216850-mRNA-1:exon:17499;Parent=Msa0216850-mRNA-1 |
| chr2_1 | exon | 63033347 | 63033445 | 63033347 | ID=Msa0216850-mRNA-1:exon:17500;Parent=Msa0216850-mRNA-1 |
| chr2_1 | exon | 63033803 | 63033844 | 63033803 | ID=Msa0216850-mRNA-1:exon:17501;Parent=Msa0216850-mRNA-1 |
| chr2_1 | exon | 63034778 | 63035344 | 63034778 | ID=Msa0216850-mRNA-1:exon:17502;Parent=Msa0216850-mRNA-1 |
| chr2_1 | five_prime_UTR | 63030943 | 63031007 | 63030943 | ID=Msa0216850-mRNA-1:five_prime_utr;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63031008 | 63031154 | 63031008 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63031956 | 63032194 | 63031956 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63032568 | 63032622 | 63032568 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63032710 | 63032790 | 63032710 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63032875 | 63032971 | 63032875 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63033056 | 63033123 | 63033056 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63033347 | 63033445 | 63033347 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63033803 | 63033844 | 63033803 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | CDS | 63034778 | 63034933 | 63034778 | ID=Msa0216850-mRNA-1:cds;Parent=Msa0216850-mRNA-1 |
| chr2_1 | three_prime_UTR | 63034934 | 63035344 | 63034934 | ID=Msa0216850-mRNA-1:three_prime_utr;Parent=Msa0216850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
