Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796580 | XP_013453442.1 | 90.769 | 65 | 5 | 1 | 17 | 81 | 59 | 122 | 3.50e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796580 | A0A072UDG1 | 90.769 | 65 | 5 | 1 | 17 | 81 | 59 | 122 | 1.67e-17 | 80.5 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0796580 | -0.814850 | 1.248899e-51 | -8.615850e-47 |
| Msa0029520 | Msa0796580 | 0.818323 | 2.080947e-52 | -8.615850e-47 |
| Msa0033840 | Msa0796580 | 0.835851 | 1.318866e-56 | -8.615850e-47 |
| Msa0036540 | Msa0796580 | -0.830326 | 3.127879e-55 | -8.615850e-47 |
| Msa0043850 | Msa0796580 | -0.818202 | 2.216306e-52 | -8.615850e-47 |
| Msa0061220 | Msa0796580 | -0.819082 | 1.399484e-52 | -8.615850e-47 |
| Msa0067590 | Msa0796580 | 0.839397 | 1.624282e-57 | -8.615850e-47 |
| Msa0081610 | Msa0796580 | 0.831405 | 1.700462e-55 | -8.615850e-47 |
| Msa0090510 | Msa0796580 | -0.840511 | 8.320216e-58 | -8.615850e-47 |
| Msa0093950 | Msa0796580 | 0.824036 | 1.003134e-53 | -8.615850e-47 |
| Msa0113370 | Msa0796580 | 0.818890 | 1.548079e-52 | -8.615850e-47 |
| Msa0117520 | Msa0796580 | -0.807334 | 5.319127e-50 | -8.615850e-47 |
| Msa0626920 | Msa0796580 | -0.803512 | 3.364405e-49 | -8.615850e-47 |
| Msa0629240 | Msa0796580 | -0.801562 | 8.490702e-49 | -8.615850e-47 |
| Msa0632420 | Msa0796580 | -0.826671 | 2.386531e-54 | -8.615850e-47 |
| Msa0637930 | Msa0796580 | 0.826753 | 2.281947e-54 | -8.615850e-47 |
| Msa0638010 | Msa0796580 | 0.808866 | 2.509004e-50 | -8.615850e-47 |
| Msa0641130 | Msa0796580 | -0.811598 | 6.461512e-51 | -8.615850e-47 |
| Msa0671170 | Msa0796580 | -0.808231 | 3.427738e-50 | -8.615850e-47 |
| Msa0671210 | Msa0796580 | -0.818925 | 1.519712e-52 | -8.615850e-47 |
| Msa0672550 | Msa0796580 | -0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0679670 | Msa0796580 | -0.802857 | 4.597961e-49 | -8.615850e-47 |
| Msa0686950 | Msa0796580 | 0.826734 | 2.305771e-54 | -8.615850e-47 |
| Msa0703810 | Msa0796580 | -0.807707 | 4.431857e-50 | -8.615850e-47 |
| Msa0707250 | Msa0796580 | -0.811601 | 6.453878e-51 | -8.615850e-47 |
| Msa0709120 | Msa0796580 | -0.814049 | 1.877910e-51 | -8.615850e-47 |
| Msa0741440 | Msa0796580 | -0.802615 | 5.157034e-49 | -8.615850e-47 |
| Msa0744640 | Msa0796580 | -0.823110 | 1.652627e-53 | -8.615850e-47 |
| Msa0779450 | Msa0796580 | 0.806365 | 8.523428e-50 | -8.615850e-47 |
| Msa0796580 | Msa0796820 | 0.832083 | 1.157126e-55 | -8.615850e-47 |
| Msa0796580 | Msa0800370 | -0.806837 | 6.775226e-50 | -8.615850e-47 |
| Msa0796580 | Msa0802240 | -0.802277 | 6.055532e-49 | -8.615850e-47 |
| Msa0796580 | Msa0822500 | -0.812008 | 5.260841e-51 | -8.615850e-47 |
| Msa0796580 | Msa0827520 | 0.827658 | 1.385028e-54 | -8.615850e-47 |
| Msa0796580 | Msa0833950 | 0.957100 | 6.111649e-115 | -8.615850e-47 |
| Msa0796580 | Msa0841730 | -0.825361 | 4.888136e-54 | -8.615850e-47 |
| Msa0796580 | Msa0870510 | -0.809552 | 1.788675e-50 | -8.615850e-47 |
| Msa0796580 | Msa0881530 | 0.892408 | 1.631280e-74 | -8.615850e-47 |
| Msa0796580 | Msa0919120 | 0.804678 | 1.924629e-49 | -8.615850e-47 |
| Msa0796580 | Msa0925030 | 0.808965 | 2.389544e-50 | -8.615850e-47 |
| Msa0796580 | Msa0931000 | 0.814626 | 1.400087e-51 | -8.615850e-47 |
| Msa0796580 | Msa0967170 | -0.803944 | 2.736673e-49 | -8.615850e-47 |
| Msa0796580 | Msa0982090 | 0.904152 | 1.654666e-79 | -8.615850e-47 |
| Msa0796580 | Msa1021520 | -0.836151 | 1.106992e-56 | -8.615850e-47 |
| Msa0796580 | Msa1029050 | -0.825584 | 4.328431e-54 | -8.615850e-47 |
| Msa0796580 | Msa1059470 | -0.810871 | 9.291062e-51 | -8.615850e-47 |
| Msa0796580 | Msa1062040 | -0.835320 | 1.796915e-56 | -8.615850e-47 |
| Msa0796580 | Msa1082360 | -0.802969 | 4.359912e-49 | -8.615850e-47 |
| Msa0796580 | Msa1083970 | -0.832266 | 1.042979e-55 | -8.615850e-47 |
| Msa0796580 | Msa1086490 | 0.813122 | 3.003373e-51 | -8.615850e-47 |
| Msa0796580 | Msa1089450 | -0.840375 | 9.030427e-58 | -8.615850e-47 |
| Msa0796580 | Msa1089460 | -0.805022 | 1.631189e-49 | -8.615850e-47 |
| Msa0796580 | Msa1109810 | -0.801233 | 9.919802e-49 | -8.615850e-47 |
| Msa0796580 | Msa1122310 | 0.811275 | 7.593634e-51 | -8.615850e-47 |
| Msa0796580 | Msa1128270 | -0.839308 | 1.712167e-57 | -8.615850e-47 |
| Msa0796580 | Msa1128280 | -0.837611 | 4.694197e-57 | -8.615850e-47 |
| Msa0796580 | Msa1165270 | -0.829185 | 5.929853e-55 | -8.615850e-47 |
| Msa0796580 | Msa1175200 | -0.817315 | 3.515583e-52 | -8.615850e-47 |
| Msa0796580 | Msa1176170 | -0.830821 | 2.366492e-55 | -8.615850e-47 |
| Msa0796580 | Msa1183140 | -0.810697 | 1.013215e-50 | -8.615850e-47 |
| Msa0796580 | Msa1206270 | -0.810387 | 1.181953e-50 | -8.615850e-47 |
| Msa0796580 | Msa1206400 | 0.802244 | 6.151102e-49 | -8.615850e-47 |
| Msa0796580 | Msa1206450 | 0.810018 | 1.419583e-50 | -8.615850e-47 |
| Msa0796580 | Msa1211230 | 0.807462 | 4.996235e-50 | -8.615850e-47 |
| Msa0796580 | Msa1211420 | 0.829332 | 5.461172e-55 | -8.615850e-47 |
| Msa0796580 | Msa1218160 | -0.814813 | 1.272526e-51 | -8.615850e-47 |
| Msa0796580 | Msa1221630 | -0.814472 | 1.514008e-51 | -8.615850e-47 |
| Msa0796580 | Msa1229480 | -0.832296 | 1.024989e-55 | -8.615850e-47 |
| Msa0796580 | Msa1236110 | 0.805489 | 1.302117e-49 | -8.615850e-47 |
| Msa0796580 | Msa1258030 | 0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa0796580 | Msa1273620 | 0.821638 | 3.629506e-53 | -8.615850e-47 |
| Msa0796580 | Msa1275480 | 0.809833 | 1.556006e-50 | -8.615850e-47 |
| Msa0796580 | Msa1277260 | -0.811686 | 6.183763e-51 | -8.615850e-47 |
| Msa0796580 | Msa1277410 | -0.811348 | 7.321436e-51 | -8.615850e-47 |
| Msa0796580 | Msa1290900 | -0.802833 | 4.649758e-49 | -8.615850e-47 |
| Msa0796580 | Msa1307160 | -0.832680 | 8.233501e-56 | -8.615850e-47 |
| Msa0796580 | Msa1307180 | -0.806365 | 8.523428e-50 | -8.615850e-47 |
| Msa0796580 | Msa1309760 | -0.804752 | 1.858105e-49 | -8.615850e-47 |
| Msa0796580 | Msa1311600 | 0.813616 | 2.339295e-51 | -8.615850e-47 |
| Msa0796580 | Msa1315890 | -0.806692 | 7.269839e-50 | -8.615850e-47 |
| Msa0796580 | Msa1316360 | -0.816631 | 5.007040e-52 | -8.615850e-47 |
| Msa0796580 | Msa1331050 | 0.819760 | 9.803980e-53 | -8.615850e-47 |
| Msa0796580 | Msa1336560 | -0.811540 | 6.652986e-51 | -8.615850e-47 |
| Msa0796580 | Msa1337850 | -0.826583 | 2.505241e-54 | -8.615850e-47 |
| Msa0796580 | Msa1341060 | -0.828750 | 7.555887e-55 | -8.615850e-47 |
| Msa0796580 | Msa1342960 | 0.843933 | 1.032878e-58 | -8.615850e-47 |
| Msa0796580 | Msa1351540 | -0.800281 | 1.551124e-48 | -8.615850e-47 |
| Msa0796580 | Msa1364350 | 0.855719 | 5.223248e-62 | -8.615850e-47 |
| Msa0796580 | Msa1369920 | 0.804322 | 2.283848e-49 | -8.615850e-47 |
| Msa0796580 | Msa1375610 | 0.807430 | 5.073666e-50 | -8.615850e-47 |
| Msa0796580 | Msa1377360 | 0.822378 | 2.446666e-53 | -8.615850e-47 |
| Msa0796580 | Msa1382380 | 0.905805 | 2.910016e-80 | -8.615850e-47 |
| Msa0796580 | Msa1383630 | -0.808147 | 3.571821e-50 | -8.615850e-47 |
| Msa0796580 | Msa1388030 | 0.885513 | 7.622785e-72 | -8.615850e-47 |
| Msa0796580 | Msa1393570 | -0.809773 | 1.603297e-50 | -8.615850e-47 |
| Msa0796580 | Msa1407760 | -0.814427 | 1.549284e-51 | -8.615850e-47 |
| Msa0796580 | Msa1435390 | -0.827327 | 1.663124e-54 | -8.615850e-47 |
| Msa0796580 | Msa1440930 | -0.812248 | 4.665174e-51 | -8.615850e-47 |
| Msa0796580 | Msa1460370 | -0.808230 | 3.429992e-50 | -8.615850e-47 |
| Msa0120880 | Msa0796580 | -0.813853 | 2.074621e-51 | -8.615850e-47 |
| Msa0126750 | Msa0796580 | 0.808762 | 2.640375e-50 | -8.615850e-47 |
| Msa0137980 | Msa0796580 | -0.816032 | 6.814063e-52 | -8.615850e-47 |
| Msa0138900 | Msa0796580 | -0.821605 | 3.693631e-53 | -8.615850e-47 |
| Msa0138990 | Msa0796580 | 0.824118 | 9.597164e-54 | -8.615850e-47 |
| Msa0139670 | Msa0796580 | -0.811626 | 6.373820e-51 | -8.615850e-47 |
| Msa0140770 | Msa0796580 | 0.829800 | 4.204091e-55 | -8.615850e-47 |
| Msa0160960 | Msa0796580 | -0.805693 | 1.180257e-49 | -8.615850e-47 |
| Msa0173950 | Msa0796580 | 0.826740 | 2.297803e-54 | -8.615850e-47 |
| Msa0183910 | Msa0796580 | -0.837249 | 5.809869e-57 | -8.615850e-47 |
| Msa0189530 | Msa0796580 | -0.809669 | 1.687713e-50 | -8.615850e-47 |
| Msa0204960 | Msa0796580 | -0.817575 | 3.070997e-52 | -8.615850e-47 |
| Msa0216850 | Msa0796580 | 0.802827 | 4.663702e-49 | -8.615850e-47 |
| Msa0220400 | Msa0796580 | 0.855374 | 6.585230e-62 | -8.615850e-47 |
| Msa0221850 | Msa0796580 | 0.827663 | 1.381410e-54 | -8.615850e-47 |
| Msa0370580 | Msa0796580 | 0.824340 | 8.512586e-54 | -8.615850e-47 |
| Msa0374340 | Msa0796580 | 0.803663 | 3.130492e-49 | -8.615850e-47 |
| Msa0383870 | Msa0796580 | 0.813914 | 2.010915e-51 | -8.615850e-47 |
| Msa0385500 | Msa0796580 | -0.837104 | 6.327166e-57 | -8.615850e-47 |
| Msa0389080 | Msa0796580 | 0.822585 | 2.189109e-53 | -8.615850e-47 |
| Msa0389210 | Msa0796580 | -0.811118 | 8.214724e-51 | -8.615850e-47 |
| Msa0445330 | Msa0796580 | -0.803678 | 3.108616e-49 | -8.615850e-47 |
| Msa0450400 | Msa0796580 | 0.806015 | 1.010046e-49 | -8.615850e-47 |
| Msa0479760 | Msa0796580 | 0.820138 | 8.034863e-53 | -8.615850e-47 |
| Msa0240900 | Msa0796580 | -0.828341 | 9.487575e-55 | -8.615850e-47 |
| Msa0257490 | Msa0796580 | -0.835195 | 1.932679e-56 | -8.615850e-47 |
| Msa0258390 | Msa0796580 | -0.824131 | 9.532036e-54 | -8.615850e-47 |
| Msa0268210 | Msa0796580 | 0.819424 | 1.170169e-52 | -8.615850e-47 |
| Msa0268450 | Msa0796580 | 0.817602 | 3.027898e-52 | -8.615850e-47 |
| Msa0268670 | Msa0796580 | 0.832158 | 1.108724e-55 | -8.615850e-47 |
| Msa0268880 | Msa0796580 | 0.808894 | 2.474863e-50 | -8.615850e-47 |
| Msa0281530 | Msa0796580 | -0.821196 | 4.591009e-53 | -8.615850e-47 |
| Msa0293720 | Msa0796580 | -0.825681 | 4.104860e-54 | -8.615850e-47 |
| Msa0295460 | Msa0796580 | 0.819875 | 9.230146e-53 | -8.615850e-47 |
| Msa0296820 | Msa0796580 | -0.817564 | 3.089116e-52 | -8.615850e-47 |
| Msa0297610 | Msa0796580 | -0.840244 | 9.770862e-58 | -8.615850e-47 |
| Msa0310730 | Msa0796580 | 0.807860 | 4.112580e-50 | -8.615850e-47 |
| Msa0317970 | Msa0796580 | -0.852329 | 4.959435e-61 | -8.615850e-47 |
| Msa0320590 | Msa0796580 | -0.805400 | 1.359559e-49 | -8.615850e-47 |
| Msa0322240 | Msa0796580 | -0.833492 | 5.169407e-56 | -8.615850e-47 |
| Msa0332190 | Msa0796580 | -0.816824 | 4.531859e-52 | -8.615850e-47 |
| Msa0332200 | Msa0796580 | -0.809837 | 1.552890e-50 | -8.615850e-47 |
| Msa0493180 | Msa0796580 | 0.803659 | 3.136834e-49 | -8.615850e-47 |
| Msa0523430 | Msa0796580 | 0.811350 | 7.316828e-51 | -8.615850e-47 |
| Msa0536350 | Msa0796580 | -0.819513 | 1.116467e-52 | -8.615850e-47 |
| Msa0545020 | Msa0796580 | -0.803699 | 3.077453e-49 | -8.615850e-47 |
| Msa0545050 | Msa0796580 | -0.818541 | 1.857827e-52 | -8.615850e-47 |
| Msa0548650 | Msa0796580 | 0.813662 | 2.284958e-51 | -8.615850e-47 |
| Msa0576120 | Msa0796580 | 0.824294 | 8.724097e-54 | -8.615850e-47 |
| Msa0589260 | Msa0796580 | 0.801656 | 8.124702e-49 | -8.615850e-47 |
| Msa0592330 | Msa0796580 | -0.859450 | 4.102557e-63 | -8.615850e-47 |
| Msa0600590 | Msa0796580 | -0.825152 | 5.476411e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796580 | MtrunA17_Chr5g0399701 | 90.769 | 65 | 5 | 1 | 17 | 81 | 59 | 122 | 3.22e-21 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 26 sgRNAs with CRISPR-Local
Find 26 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGGGCCCATGCTCATGCT+TGG | 0.274606 | 5_3:-8635757 | None:intergenic |
| ATGCTACCATTATTCTTTGC+TGG | 0.315901 | 5_3:+8635934 | Msa0796580:CDS |
| CTCATGCTTGGGCTCATACT+TGG | 0.360267 | 5_3:-8635745 | None:intergenic |
| CTGTGAACAACCGCGTTGCT+TGG | 0.369585 | 5_3:-8635898 | None:intergenic |
| TTGCTTGGACTTGAAGCAAC+TGG | 0.388265 | 5_3:-8635883 | None:intergenic |
| GAAGGTGATGGTGAGGAAGC+TGG | 0.389101 | 5_3:-8635835 | None:intergenic |
| TCGGGCCCATGCTCATGCTT+GGG | 0.410770 | 5_3:-8635756 | None:intergenic |
| GGGAAAGGTGGGCTCATACT+TGG | 0.429231 | 5_3:-8635793 | None:intergenic |
| CTTGGACTCATGCTCATGCT+CGG | 0.451338 | 5_3:-8635775 | None:intergenic |
| GCAGTACCAGCAAAGAATAA+TGG | 0.458474 | 5_3:-8635940 | None:intergenic |
| TTGGACTCATGCTCATGCTC+GGG | 0.527157 | 5_3:-8635774 | None:intergenic |
| GGAGATGGTGAAGCAGCAGT+AGG | 0.535138 | 5_3:-8635814 | None:intergenic |
| ATTATCAGACATCGATTCTC+CGG | 0.547569 | 5_3:-8635860 | None:intergenic |
| GATTCTCCGGTGGAAGGTGA+TGG | 0.549766 | 5_3:-8635847 | None:intergenic |
| TATGAGCCCAAGCATGAGCA+TGG | 0.552073 | 5_3:+8635750 | Msa0796580:CDS |
| GAAGCAGCAGTAGGGAAAGG+TGG | 0.580658 | 5_3:-8635805 | None:intergenic |
| AAGCAGCAGTAGGGAAAGGT+GGG | 0.588458 | 5_3:-8635804 | None:intergenic |
| TCCTCACCATCACCTTCCAC+CGG | 0.596602 | 5_3:+8635841 | Msa0796580:CDS |
| GGTGAAGCAGCAGTAGGGAA+AGG | 0.605004 | 5_3:-8635808 | None:intergenic |
| GATGGTGAGGAAGCTGGAGA+TGG | 0.605949 | 5_3:-8635829 | None:intergenic |
| GAGATGGTGAAGCAGCAGTA+GGG | 0.615443 | 5_3:-8635813 | None:intergenic |
| GACATCGATTCTCCGGTGGA+AGG | 0.621189 | 5_3:-8635853 | None:intergenic |
| TCCGGTGGAAGGTGATGGTG+AGG | 0.623620 | 5_3:-8635842 | None:intergenic |
| ATGAGCCCAAGCATGAGCAT+GGG | 0.631721 | 5_3:+8635751 | Msa0796580:CDS |
| ATCAGACATCGATTCTCCGG+TGG | 0.683845 | 5_3:-8635857 | None:intergenic |
| TGCTTCAAGTCCAAGCAACG+CGG | 0.698866 | 5_3:+8635888 | Msa0796580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATCAGACATCGATTCTC+CGG | - | chr5_3:8635863-8635882 | None:intergenic | 35.0% |
| ATGCTACCATTATTCTTTGC+TGG | + | chr5_3:8635934-8635953 | Msa0796580:CDS | 35.0% | |
| GCAGTACCAGCAAAGAATAA+TGG | - | chr5_3:8635943-8635962 | None:intergenic | 40.0% | |
| TTGCTTGGACTTGAAGCAAC+TGG | - | chr5_3:8635886-8635905 | None:intergenic | 45.0% | |
| CTCATGCTTGGGCTCATACT+TGG | - | chr5_3:8635748-8635767 | None:intergenic | 50.0% | |
| TATGAGCCCAAGCATGAGCA+TGG | + | chr5_3:8635750-8635769 | Msa0796580:CDS | 50.0% | |
| ATGAGCCCAAGCATGAGCAT+GGG | + | chr5_3:8635751-8635770 | Msa0796580:CDS | 50.0% | |
| TTGGACTCATGCTCATGCTC+GGG | - | chr5_3:8635777-8635796 | None:intergenic | 50.0% | |
| CTTGGACTCATGCTCATGCT+CGG | - | chr5_3:8635778-8635797 | None:intergenic | 50.0% | |
| AAGCAGCAGTAGGGAAAGGT+GGG | - | chr5_3:8635807-8635826 | None:intergenic | 50.0% | |
| GAGATGGTGAAGCAGCAGTA+GGG | - | chr5_3:8635816-8635835 | None:intergenic | 50.0% | |
| !! | ATCAGACATCGATTCTCCGG+TGG | - | chr5_3:8635860-8635879 | None:intergenic | 50.0% |
| TGCTTCAAGTCCAAGCAACG+CGG | + | chr5_3:8635888-8635907 | Msa0796580:CDS | 50.0% | |
| ! | GGGAAAGGTGGGCTCATACT+TGG | - | chr5_3:8635796-8635815 | None:intergenic | 55.0% |
| GAAGCAGCAGTAGGGAAAGG+TGG | - | chr5_3:8635808-8635827 | None:intergenic | 55.0% | |
| GGTGAAGCAGCAGTAGGGAA+AGG | - | chr5_3:8635811-8635830 | None:intergenic | 55.0% | |
| GGAGATGGTGAAGCAGCAGT+AGG | - | chr5_3:8635817-8635836 | None:intergenic | 55.0% | |
| GATGGTGAGGAAGCTGGAGA+TGG | - | chr5_3:8635832-8635851 | None:intergenic | 55.0% | |
| ! | GAAGGTGATGGTGAGGAAGC+TGG | - | chr5_3:8635838-8635857 | None:intergenic | 55.0% |
| TCCTCACCATCACCTTCCAC+CGG | + | chr5_3:8635841-8635860 | Msa0796580:CDS | 55.0% | |
| GATTCTCCGGTGGAAGGTGA+TGG | - | chr5_3:8635850-8635869 | None:intergenic | 55.0% | |
| !! | GACATCGATTCTCCGGTGGA+AGG | - | chr5_3:8635856-8635875 | None:intergenic | 55.0% |
| CTGTGAACAACCGCGTTGCT+TGG | - | chr5_3:8635901-8635920 | None:intergenic | 55.0% | |
| TCGGGCCCATGCTCATGCTT+GGG | - | chr5_3:8635759-8635778 | None:intergenic | 60.0% | |
| ! | TCCGGTGGAAGGTGATGGTG+AGG | - | chr5_3:8635845-8635864 | None:intergenic | 60.0% |
| CTCGGGCCCATGCTCATGCT+TGG | - | chr5_3:8635760-8635779 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 8635733 | 8635978 | 8635733 | ID=Msa0796580;Name=Msa0796580 |
| chr5_3 | mRNA | 8635733 | 8635978 | 8635733 | ID=Msa0796580-mRNA-1;Parent=Msa0796580;Name=Msa0796580-mRNA-1;_AED=0.19;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|81 |
| chr5_3 | exon | 8635733 | 8635978 | 8635733 | ID=Msa0796580-mRNA-1:exon:3642;Parent=Msa0796580-mRNA-1 |
| chr5_3 | CDS | 8635733 | 8635978 | 8635733 | ID=Msa0796580-mRNA-1:cds;Parent=Msa0796580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
