Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574930 | RHN43813.1 | 99.495 | 198 | 1 | 0 | 1 | 198 | 28 | 225 | 6.82e-142 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574930 | sp|O22850|GPX3_ARATH | 67.027 | 185 | 61 | 0 | 14 | 198 | 22 | 206 | 5.20e-89 | 263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574930 | A0A396GTE2 | 99.495 | 198 | 1 | 0 | 1 | 198 | 28 | 225 | 3.26e-142 | 404 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0574930 | 0.945089 | 5.854968e-104 | -8.615850e-47 |
| Msa0004480 | Msa0574930 | 0.802593 | 5.212520e-49 | -8.615850e-47 |
| Msa0004660 | Msa0574930 | 0.826623 | 2.450568e-54 | -8.615850e-47 |
| Msa0023480 | Msa0574930 | 0.817247 | 3.641178e-52 | -8.615850e-47 |
| Msa0026630 | Msa0574930 | 0.803968 | 2.706427e-49 | -8.615850e-47 |
| Msa0035050 | Msa0574930 | -0.822550 | 2.230916e-53 | -8.615850e-47 |
| Msa0043850 | Msa0574930 | 0.803659 | 3.136148e-49 | -8.615850e-47 |
| Msa0051960 | Msa0574930 | 0.848666 | 5.300543e-60 | -8.615850e-47 |
| Msa0052780 | Msa0574930 | 0.804149 | 2.481446e-49 | -8.615850e-47 |
| Msa0061220 | Msa0574930 | 0.836612 | 8.452341e-57 | -8.615850e-47 |
| Msa0067590 | Msa0574930 | -0.824789 | 6.671047e-54 | -8.615850e-47 |
| Msa0072600 | Msa0574930 | -0.831186 | 1.925523e-55 | -8.615850e-47 |
| Msa0076290 | Msa0574930 | 0.814380 | 1.586808e-51 | -8.615850e-47 |
| Msa0077370 | Msa0574930 | 0.901235 | 3.288657e-78 | -8.615850e-47 |
| Msa0077380 | Msa0574930 | 0.846628 | 1.927281e-59 | -8.615850e-47 |
| Msa0082230 | Msa0574930 | 0.823621 | 1.255349e-53 | -8.615850e-47 |
| Msa0082420 | Msa0574930 | 0.841640 | 4.204469e-58 | -8.615850e-47 |
| Msa0086190 | Msa0574930 | 0.824366 | 8.391631e-54 | -8.615850e-47 |
| Msa0090380 | Msa0574930 | 0.817994 | 2.469733e-52 | -8.615850e-47 |
| Msa0090510 | Msa0574930 | 0.822122 | 2.804792e-53 | -8.615850e-47 |
| Msa0094710 | Msa0574930 | 0.805104 | 1.568130e-49 | -8.615850e-47 |
| Msa0097570 | Msa0574930 | 0.814898 | 1.218462e-51 | -8.615850e-47 |
| Msa0101960 | Msa0574930 | 0.854403 | 1.259901e-61 | -8.615850e-47 |
| Msa0108760 | Msa0574930 | 0.827505 | 1.507795e-54 | -8.615850e-47 |
| Msa0112880 | Msa0574930 | -0.818809 | 1.614394e-52 | -8.615850e-47 |
| Msa0113370 | Msa0574930 | -0.815000 | 1.156405e-51 | -8.615850e-47 |
| Msa0117520 | Msa0574930 | 0.836124 | 1.124526e-56 | -8.615850e-47 |
| Msa0125320 | Msa0574930 | 0.832639 | 8.426991e-56 | -8.615850e-47 |
| Msa0137860 | Msa0574930 | 0.806305 | 8.773090e-50 | -8.615850e-47 |
| Msa0138900 | Msa0574930 | 0.827116 | 1.868115e-54 | -8.615850e-47 |
| Msa0155890 | Msa0574930 | 0.818133 | 2.297739e-52 | -8.615850e-47 |
| Msa0160960 | Msa0574930 | 0.824165 | 9.355312e-54 | -8.615850e-47 |
| Msa0174100 | Msa0574930 | 0.834959 | 2.216363e-56 | -8.615850e-47 |
| Msa0176260 | Msa0574930 | 0.805800 | 1.120836e-49 | -8.615850e-47 |
| Msa0183910 | Msa0574930 | 0.811069 | 8.418586e-51 | -8.615850e-47 |
| Msa0213540 | Msa0574930 | 0.830381 | 3.032108e-55 | -8.615850e-47 |
| Msa0216850 | Msa0574930 | -0.800769 | 1.233755e-48 | -8.615850e-47 |
| Msa0220400 | Msa0574930 | -0.811843 | 5.714701e-51 | -8.615850e-47 |
| Msa0227360 | Msa0574930 | 0.800089 | 1.697337e-48 | -8.615850e-47 |
| Msa0234410 | Msa0574930 | -0.809598 | 1.748613e-50 | -8.615850e-47 |
| Msa0236920 | Msa0574930 | 0.804642 | 1.958709e-49 | -8.615850e-47 |
| Msa0367540 | Msa0574930 | -0.852899 | 3.409310e-61 | -8.615850e-47 |
| Msa0367760 | Msa0574930 | 0.805479 | 1.308467e-49 | -8.615850e-47 |
| Msa0370580 | Msa0574930 | -0.857330 | 1.756787e-62 | -8.615850e-47 |
| Msa0374340 | Msa0574930 | -0.807590 | 4.692237e-50 | -8.615850e-47 |
| Msa0383870 | Msa0574930 | -0.854506 | 1.176155e-61 | -8.615850e-47 |
| Msa0386940 | Msa0574930 | 0.806233 | 9.088212e-50 | -8.615850e-47 |
| Msa0388730 | Msa0574930 | 0.820414 | 6.946416e-53 | -8.615850e-47 |
| Msa0389210 | Msa0574930 | 0.821959 | 3.058799e-53 | -8.615850e-47 |
| Msa0395750 | Msa0574930 | 0.811738 | 6.025864e-51 | -8.615850e-47 |
| Msa0403470 | Msa0574930 | -0.806734 | 7.124367e-50 | -8.615850e-47 |
| Msa0415160 | Msa0574930 | -0.832506 | 9.092700e-56 | -8.615850e-47 |
| Msa0431900 | Msa0574930 | 0.809457 | 1.874617e-50 | -8.615850e-47 |
| Msa0456770 | Msa0574930 | 0.809728 | 1.639691e-50 | -8.615850e-47 |
| Msa0470880 | Msa0574930 | 0.819766 | 9.773657e-53 | -8.615850e-47 |
| Msa0480090 | Msa0574930 | -0.812583 | 3.941665e-51 | -8.615850e-47 |
| Msa0259680 | Msa0574930 | 0.819830 | 9.453077e-53 | -8.615850e-47 |
| Msa0264680 | Msa0574930 | 0.815502 | 8.945294e-52 | -8.615850e-47 |
| Msa0267690 | Msa0574930 | 0.806074 | 9.813126e-50 | -8.615850e-47 |
| Msa0276100 | Msa0574930 | 0.819501 | 1.123646e-52 | -8.615850e-47 |
| Msa0276430 | Msa0574930 | 0.826359 | 2.833425e-54 | -8.615850e-47 |
| Msa0302730 | Msa0574930 | 0.819802 | 9.590360e-53 | -8.615850e-47 |
| Msa0302840 | Msa0574930 | 0.800777 | 1.229382e-48 | -8.615850e-47 |
| Msa0304730 | Msa0574930 | 0.805338 | 1.401160e-49 | -8.615850e-47 |
| Msa0306310 | Msa0574930 | 0.807550 | 4.786438e-50 | -8.615850e-47 |
| Msa0310720 | Msa0574930 | -0.809006 | 2.341994e-50 | -8.615850e-47 |
| Msa0310730 | Msa0574930 | -0.820167 | 7.913056e-53 | -8.615850e-47 |
| Msa0316390 | Msa0574930 | 0.813673 | 2.271869e-51 | -8.615850e-47 |
| Msa0316470 | Msa0574930 | 0.828637 | 8.048056e-55 | -8.615850e-47 |
| Msa0319020 | Msa0574930 | 0.816724 | 4.771736e-52 | -8.615850e-47 |
| Msa0320230 | Msa0574930 | 0.819478 | 1.137104e-52 | -8.615850e-47 |
| Msa0326630 | Msa0574930 | -0.808143 | 3.579376e-50 | -8.615850e-47 |
| Msa0331020 | Msa0574930 | 0.825219 | 5.281878e-54 | -8.615850e-47 |
| Msa0331380 | Msa0574930 | 0.809227 | 2.099480e-50 | -8.615850e-47 |
| Msa0341480 | Msa0574930 | 0.826797 | 2.227301e-54 | -8.615850e-47 |
| Msa0484560 | Msa0574930 | -0.807716 | 4.412483e-50 | -8.615850e-47 |
| Msa0490320 | Msa0574930 | 0.832642 | 8.413262e-56 | -8.615850e-47 |
| Msa0500610 | Msa0574930 | -0.802152 | 6.424974e-49 | -8.615850e-47 |
| Msa0500700 | Msa0574930 | -0.804898 | 1.732112e-49 | -8.615850e-47 |
| Msa0512950 | Msa0574930 | -0.804870 | 1.755360e-49 | -8.615850e-47 |
| Msa0518170 | Msa0574930 | 0.807648 | 4.561190e-50 | -8.615850e-47 |
| Msa0520770 | Msa0574930 | 0.803995 | 2.670919e-49 | -8.615850e-47 |
| Msa0528990 | Msa0574930 | 0.890212 | 1.208563e-73 | -8.615850e-47 |
| Msa0529000 | Msa0574930 | 0.898128 | 7.186726e-77 | -8.615850e-47 |
| Msa0530730 | Msa0574930 | 0.808951 | 2.406354e-50 | -8.615850e-47 |
| Msa0534610 | Msa0574930 | 0.806597 | 7.614603e-50 | -8.615850e-47 |
| Msa0534870 | Msa0574930 | 0.873089 | 1.926441e-67 | -8.615850e-47 |
| Msa0545050 | Msa0574930 | 0.847540 | 1.084350e-59 | -8.615850e-47 |
| Msa0548650 | Msa0574930 | -0.842369 | 2.697258e-58 | -8.615850e-47 |
| Msa0558650 | Msa0574930 | 0.805166 | 1.521888e-49 | -8.615850e-47 |
| Msa0561360 | Msa0574930 | 0.826173 | 3.137104e-54 | -8.615850e-47 |
| Msa0563860 | Msa0574930 | 0.802347 | 5.857893e-49 | -8.615850e-47 |
| Msa0566120 | Msa0574930 | -0.807445 | 5.036352e-50 | -8.615850e-47 |
| Msa0567370 | Msa0574930 | 0.853505 | 2.286150e-61 | -8.615850e-47 |
| Msa0567430 | Msa0574930 | 0.800779 | 1.228018e-48 | -8.615850e-47 |
| Msa0567480 | Msa0574930 | 0.829065 | 6.338799e-55 | -8.615850e-47 |
| Msa0567520 | Msa0574930 | 0.847248 | 1.304137e-59 | -8.615850e-47 |
| Msa0570700 | Msa0574930 | 0.883549 | 4.083148e-71 | -8.615850e-47 |
| Msa0574930 | Msa0576560 | 0.818170 | 2.254440e-52 | -8.615850e-47 |
| Msa0574930 | Msa0578410 | 0.819569 | 1.084210e-52 | -8.615850e-47 |
| Msa0574930 | Msa0584600 | 0.801983 | 6.958466e-49 | -8.615850e-47 |
| Msa0574930 | Msa0587120 | 0.801761 | 7.728570e-49 | -8.615850e-47 |
| Msa0574930 | Msa0590810 | 0.800829 | 1.199203e-48 | -8.615850e-47 |
| Msa0574930 | Msa0600590 | 0.859039 | 5.449131e-63 | -8.615850e-47 |
| Msa0574930 | Msa0603690 | -0.801346 | 9.403862e-49 | -8.615850e-47 |
| Msa0574930 | Msa0610830 | 0.892690 | 1.257368e-74 | -8.615850e-47 |
| Msa0574930 | Msa0611060 | 0.810141 | 1.335837e-50 | -8.615850e-47 |
| Msa0574930 | Msa0613420 | 0.809879 | 1.521568e-50 | -8.615850e-47 |
| Msa0574930 | Msa0625700 | 0.802992 | 4.311639e-49 | -8.615850e-47 |
| Msa0574930 | Msa0631320 | 0.865385 | 6.135157e-65 | -8.615850e-47 |
| Msa0574930 | Msa0637930 | -0.837072 | 6.450288e-57 | -8.615850e-47 |
| Msa0574930 | Msa0641130 | 0.847919 | 8.523870e-60 | -8.615850e-47 |
| Msa0574930 | Msa0654900 | 0.842251 | 2.897918e-58 | -8.615850e-47 |
| Msa0574930 | Msa0657930 | -0.810454 | 1.143379e-50 | -8.615850e-47 |
| Msa0574930 | Msa0671170 | 0.804035 | 2.620217e-49 | -8.615850e-47 |
| Msa0574930 | Msa0671210 | 0.806280 | 8.880205e-50 | -8.615850e-47 |
| Msa0574930 | Msa0679670 | 0.806678 | 7.319938e-50 | -8.615850e-47 |
| Msa0574930 | Msa0693520 | 0.848022 | 7.988155e-60 | -8.615850e-47 |
| Msa0574930 | Msa0698450 | 0.844672 | 6.541091e-59 | -8.615850e-47 |
| Msa0574930 | Msa0698460 | 0.847964 | 8.287835e-60 | -8.615850e-47 |
| Msa0574930 | Msa0703810 | 0.855993 | 4.344226e-62 | -8.615850e-47 |
| Msa0574930 | Msa0708600 | 0.830133 | 3.486752e-55 | -8.615850e-47 |
| Msa0574930 | Msa0713060 | 0.840904 | 6.563097e-58 | -8.615850e-47 |
| Msa0574930 | Msa0744640 | 0.866584 | 2.561848e-65 | -8.615850e-47 |
| Msa0574930 | Msa0754890 | 0.803317 | 3.693276e-49 | -8.615850e-47 |
| Msa0574930 | Msa0764070 | 0.801829 | 7.485607e-49 | -8.615850e-47 |
| Msa0574930 | Msa0769970 | 0.812141 | 4.922934e-51 | -8.615850e-47 |
| Msa0574930 | Msa0772280 | 0.808306 | 3.304461e-50 | -8.615850e-47 |
| Msa0574930 | Msa0795340 | 0.832972 | 6.966277e-56 | -8.615850e-47 |
| Msa0574930 | Msa0832620 | 0.821550 | 3.803966e-53 | -8.615850e-47 |
| Msa0574930 | Msa0833270 | 0.802681 | 4.999874e-49 | -8.615850e-47 |
| Msa0574930 | Msa0841730 | 0.865710 | 4.846609e-65 | -8.615850e-47 |
| Msa0574930 | Msa0852790 | 0.800470 | 1.419719e-48 | -8.615850e-47 |
| Msa0574930 | Msa0863990 | 0.810402 | 1.173564e-50 | -8.615850e-47 |
| Msa0574930 | Msa0870510 | 0.848966 | 4.375703e-60 | -8.615850e-47 |
| Msa0574930 | Msa0871460 | 0.824174 | 9.312547e-54 | -8.615850e-47 |
| Msa0574930 | Msa0878220 | 0.807532 | 4.826947e-50 | -8.615850e-47 |
| Msa0574930 | Msa0881530 | -0.851636 | 7.800647e-61 | -8.615850e-47 |
| Msa0574930 | Msa0910620 | 0.806478 | 8.066035e-50 | -8.615850e-47 |
| Msa0574930 | Msa0930740 | 0.959364 | 2.324379e-117 | -8.615850e-47 |
| Msa0574930 | Msa0944020 | 0.830943 | 2.208735e-55 | -8.615850e-47 |
| Msa0574930 | Msa0945130 | 0.815077 | 1.111971e-51 | -8.615850e-47 |
| Msa0574930 | Msa0968470 | -0.807855 | 4.122736e-50 | -8.615850e-47 |
| Msa0574930 | Msa0982090 | -0.847713 | 9.717455e-60 | -8.615850e-47 |
| Msa0574930 | Msa1011250 | 0.808541 | 2.944013e-50 | -8.615850e-47 |
| Msa0574930 | Msa1013070 | 0.801074 | 1.068653e-48 | -8.615850e-47 |
| Msa0574930 | Msa1016960 | 0.829718 | 4.400170e-55 | -8.615850e-47 |
| Msa0574930 | Msa1023310 | 0.827769 | 1.303062e-54 | -8.615850e-47 |
| Msa0574930 | Msa1031460 | 0.836295 | 1.017755e-56 | -8.615850e-47 |
| Msa0574930 | Msa1044510 | 0.813669 | 2.277530e-51 | -8.615850e-47 |
| Msa0574930 | Msa1058200 | 0.809970 | 1.453900e-50 | -8.615850e-47 |
| Msa0574930 | Msa1059470 | 0.809347 | 1.978996e-50 | -8.615850e-47 |
| Msa0574930 | Msa1061740 | 0.802562 | 5.288214e-49 | -8.615850e-47 |
| Msa0574930 | Msa1062040 | 0.868345 | 6.998365e-66 | -8.615850e-47 |
| Msa0574930 | Msa1070540 | 0.848451 | 6.080027e-60 | -8.615850e-47 |
| Msa0574930 | Msa1082360 | 0.833159 | 6.257764e-56 | -8.615850e-47 |
| Msa0574930 | Msa1082520 | 0.816956 | 4.233385e-52 | -8.615850e-47 |
| Msa0574930 | Msa1101240 | 0.847690 | 9.858742e-60 | -8.615850e-47 |
| Msa0574930 | Msa1107200 | 0.855241 | 7.197831e-62 | -8.615850e-47 |
| Msa0574930 | Msa1109810 | 0.824333 | 8.542049e-54 | -8.615850e-47 |
| Msa0574930 | Msa1113100 | 0.808567 | 2.907289e-50 | -8.615850e-47 |
| Msa0574930 | Msa1131430 | 0.814998 | 1.157619e-51 | -8.615850e-47 |
| Msa0574930 | Msa1140630 | 0.819569 | 1.084210e-52 | -8.615850e-47 |
| Msa0574930 | Msa1150780 | 0.848589 | 5.566213e-60 | -8.615850e-47 |
| Msa0574930 | Msa1159160 | 0.817663 | 2.933606e-52 | -8.615850e-47 |
| Msa0574930 | Msa1159170 | 0.818168 | 2.256374e-52 | -8.615850e-47 |
| Msa0574930 | Msa1160560 | 0.800094 | 1.693338e-48 | -8.615850e-47 |
| Msa0574930 | Msa1165430 | 0.801141 | 1.035902e-48 | -8.615850e-47 |
| Msa0574930 | Msa1173150 | 0.809167 | 2.162697e-50 | -8.615850e-47 |
| Msa0574930 | Msa1176170 | 0.814405 | 1.566591e-51 | -8.615850e-47 |
| Msa0574930 | Msa1176380 | 0.822540 | 2.242565e-53 | -8.615850e-47 |
| Msa0574930 | Msa1180720 | 0.821024 | 5.031080e-53 | -8.615850e-47 |
| Msa0574930 | Msa1183140 | 0.820470 | 6.744295e-53 | -8.615850e-47 |
| Msa0574930 | Msa1191440 | 0.816580 | 5.138909e-52 | -8.615850e-47 |
| Msa0574930 | Msa1206320 | 0.809455 | 1.875872e-50 | -8.615850e-47 |
| Msa0574930 | Msa1206370 | 0.801328 | 9.482365e-49 | -8.615850e-47 |
| Msa0574930 | Msa1208990 | 0.811704 | 6.129392e-51 | -8.615850e-47 |
| Msa0574930 | Msa1218160 | 0.833284 | 5.825063e-56 | -8.615850e-47 |
| Msa0574930 | Msa1225580 | 0.821747 | 3.424628e-53 | -8.615850e-47 |
| Msa0574930 | Msa1229480 | 0.825438 | 4.687553e-54 | -8.615850e-47 |
| Msa0574930 | Msa1231190 | 0.826241 | 3.022834e-54 | -8.615850e-47 |
| Msa0574930 | Msa1231710 | 0.817787 | 2.751408e-52 | -8.615850e-47 |
| Msa0574930 | Msa1236470 | 0.807793 | 4.249972e-50 | -8.615850e-47 |
| Msa0574930 | Msa1238500 | 0.815992 | 6.956608e-52 | -8.615850e-47 |
| Msa0574930 | Msa1238600 | 0.811285 | 7.555503e-51 | -8.615850e-47 |
| Msa0574930 | Msa1238680 | 0.810424 | 1.160775e-50 | -8.615850e-47 |
| Msa0574930 | Msa1239620 | 0.807405 | 5.135489e-50 | -8.615850e-47 |
| Msa0574930 | Msa1252810 | 0.843530 | 1.323800e-58 | -8.615850e-47 |
| Msa0574930 | Msa1269060 | 0.817645 | 2.961596e-52 | -8.615850e-47 |
| Msa0574930 | Msa1270050 | 0.829018 | 6.507116e-55 | -8.615850e-47 |
| Msa0574930 | Msa1272010 | 0.824502 | 7.794488e-54 | -8.615850e-47 |
| Msa0574930 | Msa1277410 | 0.851905 | 6.542088e-61 | -8.615850e-47 |
| Msa0574930 | Msa1277670 | 0.805677 | 1.189251e-49 | -8.615850e-47 |
| Msa0574930 | Msa1279100 | 0.827406 | 1.592112e-54 | -8.615850e-47 |
| Msa0574930 | Msa1286210 | 0.800675 | 1.289743e-48 | -8.615850e-47 |
| Msa0574930 | Msa1298390 | -0.806454 | 8.161325e-50 | -8.615850e-47 |
| Msa0574930 | Msa1303320 | 0.802206 | 6.262228e-49 | -8.615850e-47 |
| Msa0574930 | Msa1306830 | 0.802195 | 6.295950e-49 | -8.615850e-47 |
| Msa0574930 | Msa1307160 | 0.852970 | 3.254599e-61 | -8.615850e-47 |
| Msa0574930 | Msa1307180 | 0.804780 | 1.832513e-49 | -8.615850e-47 |
| Msa0574930 | Msa1309760 | 0.807753 | 4.332581e-50 | -8.615850e-47 |
| Msa0574930 | Msa1312440 | 0.814517 | 1.479668e-51 | -8.615850e-47 |
| Msa0574930 | Msa1316360 | 0.821388 | 4.147175e-53 | -8.615850e-47 |
| Msa0574930 | Msa1341060 | 0.816420 | 5.580677e-52 | -8.615850e-47 |
| Msa0574930 | Msa1346840 | 0.802681 | 4.999068e-49 | -8.615850e-47 |
| Msa0574930 | Msa1355510 | 0.813695 | 2.246818e-51 | -8.615850e-47 |
| Msa0574930 | Msa1358090 | 0.817730 | 2.833638e-52 | -8.615850e-47 |
| Msa0574930 | Msa1364350 | -0.824158 | 9.390290e-54 | -8.615850e-47 |
| Msa0574930 | Msa1367790 | 0.821968 | 3.044450e-53 | -8.615850e-47 |
| Msa0574930 | Msa1368610 | 0.809644 | 1.709088e-50 | -8.615850e-47 |
| Msa0574930 | Msa1382380 | -0.846708 | 1.833212e-59 | -8.615850e-47 |
| Msa0574930 | Msa1386000 | 0.800626 | 1.319238e-48 | -8.615850e-47 |
| Msa0574930 | Msa1400200 | 0.808126 | 3.609762e-50 | -8.615850e-47 |
| Msa0574930 | Msa1405420 | 0.829193 | 5.903625e-55 | -8.615850e-47 |
| Msa0574930 | Msa1407760 | 0.873215 | 1.747416e-67 | -8.615850e-47 |
| Msa0574930 | Msa1415410 | 0.829619 | 4.650556e-55 | -8.615850e-47 |
| Msa0574930 | Msa1419840 | 0.817253 | 3.629804e-52 | -8.615850e-47 |
| Msa0574930 | Msa1433410 | 0.816489 | 5.387487e-52 | -8.615850e-47 |
| Msa0574930 | Msa1435320 | 0.808638 | 2.806763e-50 | -8.615850e-47 |
| Msa0574930 | Msa1437730 | 0.843325 | 1.501805e-58 | -8.615850e-47 |
| Msa0574930 | Msa1443400 | 0.811392 | 7.164993e-51 | -8.615850e-47 |
| Msa0574930 | Msa1443620 | 0.816668 | 4.910221e-52 | -8.615850e-47 |
| Msa0574930 | Msa1448040 | 0.811893 | 5.574026e-51 | -8.615850e-47 |
| Msa0574930 | Msa1457620 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
| Msa0574930 | Msa1465860 | 0.829362 | 5.372151e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574930 | MtrunA17_Chr8g0391921 | 99.495 | 198 | 1 | 0 | 1 | 198 | 28 | 225 | 6.28e-146 | 404 |
| Msa0574930 | MtrunA17_Chr8g0386721 | 71.856 | 167 | 46 | 1 | 32 | 197 | 1 | 167 | 3.61e-87 | 254 |
| Msa0574930 | MtrunA17_Chr1g0150061 | 66.049 | 162 | 55 | 0 | 36 | 197 | 75 | 236 | 1.58e-78 | 234 |
| Msa0574930 | MtrunA17_Chr8g0386731 | 65.823 | 158 | 54 | 0 | 38 | 195 | 12 | 169 | 1.00e-74 | 222 |
| Msa0574930 | MtrunA17_Chr7g0259611 | 59.524 | 168 | 65 | 1 | 28 | 195 | 3 | 167 | 1.97e-72 | 216 |
| Msa0574930 | MtrunA17_Chr5g0397561 | 63.816 | 152 | 54 | 1 | 38 | 188 | 10 | 161 | 3.24e-68 | 206 |
| Msa0574930 | MtrunA17_Chr1g0185791 | 57.233 | 159 | 67 | 1 | 39 | 196 | 11 | 169 | 2.75e-64 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574930 | AT2G43350.2 | 67.027 | 185 | 61 | 0 | 14 | 198 | 22 | 206 | 5.29e-90 | 263 |
| Msa0574930 | AT2G43350.1 | 67.027 | 185 | 61 | 0 | 14 | 198 | 22 | 206 | 5.29e-90 | 263 |
| Msa0574930 | AT2G31570.1 | 73.780 | 164 | 43 | 0 | 32 | 195 | 1 | 164 | 3.50e-89 | 259 |
| Msa0574930 | AT4G11600.1 | 69.412 | 170 | 52 | 0 | 26 | 195 | 59 | 228 | 1.14e-86 | 255 |
| Msa0574930 | AT4G31870.1 | 68.519 | 162 | 51 | 0 | 36 | 197 | 72 | 233 | 1.49e-82 | 244 |
| Msa0574930 | AT2G25080.1 | 64.198 | 162 | 58 | 0 | 36 | 197 | 75 | 236 | 6.86e-78 | 233 |
| Msa0574930 | AT1G63460.1 | 60.479 | 167 | 66 | 0 | 32 | 198 | 1 | 167 | 8.02e-76 | 225 |
| Msa0574930 | AT3G63080.1 | 66.026 | 156 | 53 | 0 | 40 | 195 | 14 | 169 | 6.11e-74 | 221 |
| Msa0574930 | AT2G48150.1 | 62.048 | 166 | 63 | 0 | 33 | 198 | 5 | 170 | 2.35e-73 | 219 |
| Msa0574930 | AT2G48150.2 | 64.583 | 144 | 51 | 0 | 55 | 198 | 1 | 144 | 1.23e-65 | 199 |
| Msa0574930 | AT4G31870.2 | 63.333 | 60 | 22 | 0 | 38 | 97 | 74 | 133 | 1.78e-21 | 87.0 |
Find 61 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATCCCTAGTTAATTTA+TGG | 0.119023 | 4_1:-78684236 | Msa0574930:three_prime_UTR |
| ACACACAGTTGTTGACTTTC+TGG | 0.139253 | 4_1:-78687254 | Msa0574930:CDS |
| ATGAATGAAGAATAAATAAA+TGG | 0.203109 | 4_1:-78687372 | Msa0574930:five_prime_UTR |
| GATCAGAAAGGAGGAATATT+TGG | 0.230959 | 4_1:-78685180 | Msa0574930:CDS |
| GTCTCTAGACTTTGAAATCT+TGG | 0.241499 | 4_1:-78685582 | Msa0574930:intron |
| ATTTGGTGTTCTCACTTTCT+TGG | 0.273903 | 4_1:-78684161 | Msa0574930:three_prime_UTR |
| AAACCATAAAGTTGCCAAAA+AGG | 0.285705 | 4_1:-78684009 | Msa0574930:three_prime_UTR |
| GACCTTGATCCTTATACTTC+TGG | 0.294629 | 4_1:+78685699 | None:intergenic |
| TTCTTAATATGTTGTGTACT+TGG | 0.314274 | 4_1:-78684204 | Msa0574930:three_prime_UTR |
| TTATTTATTCTTCATTCATA+TGG | 0.314436 | 4_1:+78687376 | None:intergenic |
| AATCTATTCAACGCTTTCAT+AGG | 0.337079 | 4_1:-78684285 | Msa0574930:three_prime_UTR |
| CAGAAACTCATCTTCCAAAA+TGG | 0.340181 | 4_1:-78687184 | Msa0574930:CDS |
| ATACTCTAAAATGATGTATC+AGG | 0.347204 | 4_1:-78684131 | Msa0574930:three_prime_UTR |
| ATCATGCAATAAGAACAATT+TGG | 0.356028 | 4_1:-78684178 | Msa0574930:three_prime_UTR |
| CTGGTTCCTGTCCACGAAAC+TGG | 0.374855 | 4_1:+78685546 | None:intergenic |
| AGTGAAATCGTAGATGGATT+TGG | 0.407313 | 4_1:+78687149 | None:intergenic |
| TGTTCTGTACCAGAAGTATA+AGG | 0.413755 | 4_1:-78685708 | Msa0574930:CDS |
| CAACATATTAAGAATCTTCC+AGG | 0.424766 | 4_1:+78684213 | None:intergenic |
| TATTTATTCTTCATTCATAT+GGG | 0.432672 | 4_1:+78687377 | None:intergenic |
| AGGAAGGGTAAAGTTTGCTT+GGG | 0.434431 | 4_1:-78683989 | Msa0574930:three_prime_UTR |
| AAGGAAGGGTAAAGTTTGCT+TGG | 0.435106 | 4_1:-78683990 | Msa0574930:three_prime_UTR |
| TATTATAGGTTGAAGTCAAT+GGG | 0.436019 | 4_1:-78685236 | Msa0574930:intron |
| TTATTATAGGTTGAAGTCAA+TGG | 0.438351 | 4_1:-78685237 | Msa0574930:intron |
| TGAATGAAGAATAAATAAAT+GGG | 0.447394 | 4_1:-78687371 | Msa0574930:five_prime_UTR |
| CTTGACAGTGAAATCGTAGA+TGG | 0.450016 | 4_1:+78687143 | None:intergenic |
| TGAATTTCTTCACTAGATCC+TGG | 0.461518 | 4_1:+78685527 | None:intergenic |
| TCTTATAATAATATAAAATA+CGG | 0.468552 | 4_1:-78687306 | Msa0574930:five_prime_UTR |
| TGTGAAATTGATTGATATCA+TGG | 0.476011 | 4_1:-78687277 | Msa0574930:exon |
| TCCCTAGTTAATTTATGGCC+TGG | 0.476360 | 4_1:-78684231 | Msa0574930:three_prime_UTR |
| ATGCAACCAGTTTCGTGGAC+AGG | 0.495715 | 4_1:-78685552 | Msa0574930:CDS |
| TGAATTCCCAGTGTTTGATA+AGG | 0.499710 | 4_1:-78685477 | Msa0574930:intron |
| TTTCCATGCAACCAGTTTCG+TGG | 0.506265 | 4_1:-78685557 | Msa0574930:CDS |
| GTAATCACCTTATCAAACAC+TGG | 0.520081 | 4_1:+78685470 | None:intergenic |
| TTCCAGGCCATAAATTAACT+AGG | 0.521684 | 4_1:+78684229 | None:intergenic |
| AAGTTCTTAGTAAACAAAGA+AGG | 0.522522 | 4_1:-78685132 | Msa0574930:CDS |
| TACCAGAAGTATAAGGATCA+AGG | 0.527051 | 4_1:-78685701 | Msa0574930:intron |
| ATTCTTCATTCATATGGGTG+AGG | 0.534175 | 4_1:+78687382 | None:intergenic |
| CAGTTTCGTGGACAGGAACC+AGG | 0.539854 | 4_1:-78685545 | Msa0574930:CDS |
| GGGTGAGGACGGAAAGTTCG+TGG | 0.544382 | 4_1:+78687397 | None:intergenic |
| TTCAGAATGTTGTTTGCACA+AGG | 0.545993 | 4_1:-78685508 | Msa0574930:CDS |
| TTCATTCATATGGGTGAGGA+CGG | 0.547452 | 4_1:+78687386 | None:intergenic |
| CTTAGTAAACAAAGAAGGGA+AGG | 0.552208 | 4_1:-78685127 | Msa0574930:CDS |
| ATACAGAGGAAAGGTTCTGC+TGG | 0.554671 | 4_1:-78686948 | Msa0574930:CDS |
| CATCTACGATTTCACTGTCA+AGG | 0.560391 | 4_1:-78687142 | Msa0574930:intron |
| AAGTCATCACTCAGAGGGAA+AGG | 0.562776 | 4_1:+78684045 | None:intergenic |
| TGTCCACGAAACTGGTTGCA+TGG | 0.566923 | 4_1:+78685554 | None:intergenic |
| TTCAACGCTTTCATAGGAGA+AGG | 0.573788 | 4_1:-78684279 | Msa0574930:three_prime_UTR |
| GAAATTAAGTTACCATTGTG+AGG | 0.576973 | 4_1:+78686913 | None:intergenic |
| AGTTCTTAGTAAACAAAGAA+GGG | 0.577714 | 4_1:-78685131 | Msa0574930:CDS |
| AAACAAAGAAGGGAAGGTTG+TGG | 0.578941 | 4_1:-78685121 | Msa0574930:CDS |
| AAAGGAGGAATATTTGGAGA+TGG | 0.590133 | 4_1:-78685174 | Msa0574930:CDS |
| TCCAGGCCATAAATTAACTA+GGG | 0.602709 | 4_1:+78684230 | None:intergenic |
| ACTAAACTCATATATTGCAA+AGG | 0.613180 | 4_1:-78684931 | Msa0574930:intron |
| GGTGAGGACGGAAAGTTCGT+GGG | 0.630102 | 4_1:+78687398 | None:intergenic |
| TAATCACCTTATCAAACACT+GGG | 0.630197 | 4_1:+78685471 | None:intergenic |
| CTACAATTGCAGGATATCAG+TGG | 0.631345 | 4_1:-78686992 | Msa0574930:intron |
| TCTGAGTCAATACAGAGGAA+AGG | 0.631545 | 4_1:-78686957 | Msa0574930:CDS |
| TATTTGGAGATGGTATCAAG+TGG | 0.648183 | 4_1:-78685164 | Msa0574930:CDS |
| CACCGCTCCTCTGAAAATCG+AGG | 0.662646 | 4_1:-78685082 | Msa0574930:intron |
| TTGTCAATGTTGCCTCACAA+TGG | 0.714648 | 4_1:-78686925 | Msa0574930:intron |
| GTGAGTCTGAGTCAATACAG+AGG | 0.737687 | 4_1:-78686962 | Msa0574930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAAACATAAAAAAAAA+TGG | + | chr4_1:78684246-78684265 | None:intergenic | 10.0% |
| !!! | TTTAAAAAATTGTTTTTTGA+TGG | - | chr4_1:78684279-78684298 | Msa0574930:three_prime_UTR | 10.0% |
| !!! | TTAAAAAATTGTTTTTTGAT+GGG | - | chr4_1:78684280-78684299 | Msa0574930:three_prime_UTR | 10.0% |
| !! | AAAATATATATATGAACAAA+CGG | + | chr4_1:78684638-78684657 | None:intergenic | 10.0% |
| !!! | ATGATTGATTATAATTTTTT+TGG | - | chr4_1:78684737-78684756 | Msa0574930:intron | 10.0% |
| !! | AAAAAAAAACATATACAATT+TGG | + | chr4_1:78686017-78686036 | None:intergenic | 10.0% |
| !! | TATTTATTCTTCATTCATAT+GGG | + | chr4_1:78683986-78684005 | None:intergenic | 15.0% |
| !! | TTATTTATTCTTCATTCATA+TGG | + | chr4_1:78683987-78684006 | None:intergenic | 15.0% |
| !! | ATGAATGAAGAATAAATAAA+TGG | - | chr4_1:78683988-78684007 | Msa0574930:three_prime_UTR | 15.0% |
| !! | TGAATGAAGAATAAATAAAT+GGG | - | chr4_1:78683989-78684008 | Msa0574930:three_prime_UTR | 15.0% |
| !!! | ACTTAATTTCATTCATTTTT+TGG | - | chr4_1:78684460-78684479 | Msa0574930:intron | 15.0% |
| !! | TAAATTAAAATATGTAGATC+AGG | + | chr4_1:78684517-78684536 | None:intergenic | 15.0% |
| !! | GTATATGAATTAAATCATAA+AGG | + | chr4_1:78684614-78684633 | None:intergenic | 15.0% |
| !!! | TTGTATTTTTGTTTTGTTTT+TGG | - | chr4_1:78685319-78685338 | Msa0574930:intron | 15.0% |
| !! | ACAATTATAGTTATAGTTAT+AGG | + | chr4_1:78685576-78685595 | None:intergenic | 15.0% |
| !! | AAAGAATTTACAATAAATCA+TGG | + | chr4_1:78685915-78685934 | None:intergenic | 15.0% |
| !!! | TATCAAATAATGTATGTTTT+AGG | - | chr4_1:78686785-78686804 | Msa0574930:intron | 15.0% |
| !!! | GATTTTTATTCAGTAGTTAA+TGG | - | chr4_1:78685094-78685113 | Msa0574930:CDS | 20.0% |
| !!! | ATTTTATGCTGTTTTGTTTT+TGG | - | chr4_1:78685243-78685262 | Msa0574930:intron | 20.0% |
| !!! | AAGTTATTAAGGAAATTTTG+CGG | - | chr4_1:78685361-78685380 | Msa0574930:intron | 20.0% |
| !!! | TATTTTTTTGTTTTTGTCCT+TGG | + | chr4_1:78685698-78685717 | None:intergenic | 20.0% |
| !! | TTTGTAACTTATTTGACATT+TGG | - | chr4_1:78685932-78685951 | Msa0574930:intron | 20.0% |
| !! | AATATATATGCCAGTTTATA+TGG | - | chr4_1:78686079-78686098 | Msa0574930:intron | 20.0% |
| !! | AAAATGATTTCCATATAAAC+TGG | + | chr4_1:78686092-78686111 | None:intergenic | 20.0% |
| !!! | CATTTTTGTGCTTATATTTT+AGG | - | chr4_1:78686308-78686327 | Msa0574930:intron | 20.0% |
| !!! | AAATGCACATTTTATTCATT+TGG | - | chr4_1:78686555-78686574 | Msa0574930:intron | 20.0% |
| !! | AAAATATTTAGTTGTGGTAA+GGG | + | chr4_1:78686649-78686668 | None:intergenic | 20.0% |
| !! | ATAGTCAAAATATTTAGTTG+TGG | + | chr4_1:78686655-78686674 | None:intergenic | 20.0% |
| !! | TTGTGTTAGAAATTATCATA+TGG | - | chr4_1:78686720-78686739 | Msa0574930:intron | 20.0% |
| !!! | TTTTTTTTTTTTACAGGACA+TGG | - | chr4_1:78687050-78687069 | Msa0574930:intron | 20.0% |
| !! | ATTTATCCCTAGTTAATTTA+TGG | - | chr4_1:78687124-78687143 | Msa0574930:intron | 20.0% |
| ! | TGTGAAATTGATTGATATCA+TGG | - | chr4_1:78684083-78684102 | Msa0574930:three_prime_UTR | 25.0% |
| ! | TGAATTAAATCATAAAGGAC+TGG | + | chr4_1:78684609-78684628 | None:intergenic | 25.0% |
| !! | AGTCAAACATTTTTAACGAT+AGG | + | chr4_1:78684686-78684705 | None:intergenic | 25.0% |
| ! | ATTAATCTTTCTCCATTAGT+AGG | - | chr4_1:78685032-78685051 | Msa0574930:intron | 25.0% |
| ! | TTAGAATCTGAACAAATAAC+AGG | + | chr4_1:78685061-78685080 | None:intergenic | 25.0% |
| ! | TGACATGAGATTTAAATCAA+TGG | - | chr4_1:78685136-78685155 | Msa0574930:CDS | 25.0% |
| ! | AGTTATAGGACAGAATAAAA+TGG | + | chr4_1:78685562-78685581 | None:intergenic | 25.0% |
| ! | AAACATATACAATTTGGCTA+GGG | + | chr4_1:78686011-78686030 | None:intergenic | 25.0% |
| ! | AAAACATATACAATTTGGCT+AGG | + | chr4_1:78686012-78686031 | None:intergenic | 25.0% |
| !! | TTATTATAGGTTGAAGTCAA+TGG | - | chr4_1:78686123-78686142 | Msa0574930:intron | 25.0% |
| !! | TATTATAGGTTGAAGTCAAT+GGG | - | chr4_1:78686124-78686143 | Msa0574930:intron | 25.0% |
| ! | AAGTTCTTAGTAAACAAAGA+AGG | - | chr4_1:78686228-78686247 | Msa0574930:intron | 25.0% |
| ! | AGTTCTTAGTAAACAAAGAA+GGG | - | chr4_1:78686229-78686248 | Msa0574930:intron | 25.0% |
| !! | TATATGTTTCTTTTTGCAGA+AGG | - | chr4_1:78686375-78686394 | Msa0574930:intron | 25.0% |
| ! | ACTAAACTCATATATTGCAA+AGG | - | chr4_1:78686429-78686448 | Msa0574930:intron | 25.0% |
| ! | TATTGATCATCTAGAAGAAA+AGG | + | chr4_1:78686487-78686506 | None:intergenic | 25.0% |
| ! | CAAAATATTTAGTTGTGGTA+AGG | + | chr4_1:78686650-78686669 | None:intergenic | 25.0% |
| ! | CTCTTAATCTACCATTTATT+TGG | - | chr4_1:78686980-78686999 | Msa0574930:CDS | 25.0% |
| ! | AAAAAAAGAAGGAAGAAGTT+AGG | + | chr4_1:78687030-78687049 | None:intergenic | 25.0% |
| ! | TTCTTAATATGTTGTGTACT+TGG | - | chr4_1:78687156-78687175 | Msa0574930:CDS | 25.0% |
| ! | ATCATGCAATAAGAACAATT+TGG | - | chr4_1:78687182-78687201 | Msa0574930:CDS | 25.0% |
| !!! | ATACTCTAAAATGATGTATC+AGG | - | chr4_1:78687229-78687248 | Msa0574930:CDS | 25.0% |
| !!! | GCACGTTATTTTATTTTACA+TGG | - | chr4_1:78687254-78687273 | Msa0574930:CDS | 25.0% |
| !! | GATGGATTTGGATGAATTTT+CGG | + | chr4_1:78684202-78684221 | None:intergenic | 30.0% |
| !!! | ATTGTTTTTTGATGGGTCAA+TGG | - | chr4_1:78684287-78684306 | Msa0574930:three_prime_UTR | 30.0% |
| GAAATTAAGTTACCATTGTG+AGG | + | chr4_1:78684450-78684469 | None:intergenic | 30.0% | |
| GACAGATCATAATTGATTGA+TGG | + | chr4_1:78684664-78684683 | None:intergenic | 30.0% | |
| AATCACACAACATAATCCAT+AGG | + | chr4_1:78684870-78684889 | None:intergenic | 30.0% | |
| TTGATGTTTGAGAAATGTCA+TGG | - | chr4_1:78684921-78684940 | Msa0574930:intron | 30.0% | |
| ! | AAGAATACTTGCACAGTTTT+TGG | - | chr4_1:78684990-78685009 | Msa0574930:intron | 30.0% |
| CATGAGATTTAAATCAATGG+TGG | - | chr4_1:78685139-78685158 | Msa0574930:CDS | 30.0% | |
| !!! | TTTGATCTGTTTTTGTTGCT+TGG | - | chr4_1:78685205-78685224 | Msa0574930:CDS | 30.0% |
| !!! | TTATGCTGTTTTGTTTTTGG+TGG | - | chr4_1:78685246-78685265 | Msa0574930:intron | 30.0% |
| !! | TTTTTGCGTTGTTTTGTTCT+TGG | - | chr4_1:78685276-78685295 | Msa0574930:intron | 30.0% |
| !! | AATAACTTTTTCTAAGCCGA+AGG | + | chr4_1:78685349-78685368 | None:intergenic | 30.0% |
| CGGCTTAGAAAAAGTTATTA+AGG | - | chr4_1:78685350-78685369 | Msa0574930:intron | 30.0% | |
| GGCTTCTTCAAAAAACAATT+GGG | - | chr4_1:78685382-78685401 | Msa0574930:intron | 30.0% | |
| GCTTCTTCAAAAAACAATTG+GGG | - | chr4_1:78685383-78685402 | Msa0574930:intron | 30.0% | |
| CTTCTTCAAAAAACAATTGG+GGG | - | chr4_1:78685384-78685403 | Msa0574930:intron | 30.0% | |
| ATTCTAATTCATTGTTGCAG+CGG | - | chr4_1:78685599-78685618 | Msa0574930:intron | 30.0% | |
| TAATCACCTTATCAAACACT+GGG | + | chr4_1:78685892-78685911 | None:intergenic | 30.0% | |
| ! | TTTTTGCAATGAATTCTGCA+AGG | - | chr4_1:78686041-78686060 | Msa0574930:intron | 30.0% |
| ! | ACCACTTTACAAGTTTTTGA+AGG | - | chr4_1:78686158-78686177 | Msa0574930:intron | 30.0% |
| TCCTTCAAAAACTTGTAAAG+TGG | + | chr4_1:78686162-78686181 | None:intergenic | 30.0% | |
| !! | AAGTTTTTGAAGGATCAGAA+AGG | - | chr4_1:78686168-78686187 | Msa0574930:intron | 30.0% |
| ATCTAGAAGAAAAGGAAAAG+AGG | + | chr4_1:78686479-78686498 | None:intergenic | 30.0% | |
| TTCTAGATGATCAATACTTG+TGG | - | chr4_1:78686491-78686510 | Msa0574930:intron | 30.0% | |
| TGTGTGTTTCATTGAAAAGA+GGG | + | chr4_1:78686613-78686632 | None:intergenic | 30.0% | |
| ACATTATTTGCTTGCATGAT+GGG | + | chr4_1:78686891-78686910 | None:intergenic | 30.0% | |
| AACATTATTTGCTTGCATGA+TGG | + | chr4_1:78686892-78686911 | None:intergenic | 30.0% | |
| TAGTTTCATTTAGATAGCGA+TGG | - | chr4_1:78686954-78686973 | Msa0574930:CDS | 30.0% | |
| GGAATGCATAAAATGAGAAA+GGG | + | chr4_1:78687009-78687028 | None:intergenic | 30.0% | |
| AGGAATGCATAAAATGAGAA+AGG | + | chr4_1:78687010-78687029 | None:intergenic | 30.0% | |
| AATCTATTCAACGCTTTCAT+AGG | - | chr4_1:78687075-78687094 | Msa0574930:intron | 30.0% | |
| CAACATATTAAGAATCTTCC+AGG | + | chr4_1:78687150-78687169 | None:intergenic | 30.0% | |
| AAACCATAAAGTTGCCAAAA+AGG | - | chr4_1:78687351-78687370 | Msa0574930:five_prime_UTR | 30.0% | |
| ATAAAGTTGCCAAAAAGGAA+GGG | - | chr4_1:78687356-78687375 | Msa0574930:five_prime_UTR | 30.0% | |
| ATTCTTCATTCATATGGGTG+AGG | + | chr4_1:78683981-78684000 | None:intergenic | 35.0% | |
| CAGAAACTCATCTTCCAAAA+TGG | - | chr4_1:78684176-78684195 | Msa0574930:three_prime_UTR | 35.0% | |
| ! | AGTGAAATCGTAGATGGATT+TGG | + | chr4_1:78684214-78684233 | None:intergenic | 35.0% |
| GTGATATGTACTACAATTGC+AGG | - | chr4_1:78684358-78684377 | Msa0574930:intron | 35.0% | |
| AATCATATGTGCGACTTTAG+AGG | + | chr4_1:78684723-78684742 | None:intergenic | 35.0% | |
| ATAGAATTGCGAAGTATAGC+TGG | - | chr4_1:78684842-78684861 | Msa0574930:intron | 35.0% | |
| !! | GCACAGTTTTTGGATTTATG+AGG | - | chr4_1:78685000-78685019 | Msa0574930:intron | 35.0% |
| AATAACAGGTCACCTACTAA+TGG | + | chr4_1:78685047-78685066 | None:intergenic | 35.0% | |
| !!! | TCTGTTTTTGTTGCTTGGTT+TGG | - | chr4_1:78685210-78685229 | Msa0574930:CDS | 35.0% |
| ACAAAACAATTACCCACGAA+GGG | + | chr4_1:78685303-78685322 | None:intergenic | 35.0% | |
| TACAAAACAATTACCCACGA+AGG | + | chr4_1:78685304-78685323 | None:intergenic | 35.0% | |
| !!! | TTTTGTTTTTGGCACACCTT+CGG | - | chr4_1:78685330-78685349 | Msa0574930:intron | 35.0% |
| CGGCTTCTTCAAAAAACAAT+TGG | - | chr4_1:78685381-78685400 | Msa0574930:intron | 35.0% | |
| TGAGATTGGACTATCATATG+TGG | - | chr4_1:78685407-78685426 | Msa0574930:intron | 35.0% | |
| GAGATTGGACTATCATATGT+GGG | - | chr4_1:78685408-78685427 | Msa0574930:intron | 35.0% | |
| ! | TGTTCTGTACCAGAAGTATA+AGG | - | chr4_1:78685652-78685671 | Msa0574930:intron | 35.0% |
| ! | TACCAGAAGTATAAGGATCA+AGG | - | chr4_1:78685659-78685678 | Msa0574930:intron | 35.0% |
| TTTGTCCTTGGTTAAAGTCA+CGG | + | chr4_1:78685686-78685705 | None:intergenic | 35.0% | |
| !! | GTCTCTAGACTTTGAAATCT+TGG | - | chr4_1:78685778-78685797 | Msa0574930:intron | 35.0% |
| TGAATTTCTTCACTAGATCC+TGG | + | chr4_1:78685836-78685855 | None:intergenic | 35.0% | |
| ! | TTCAGAATGTTGTTTGCACA+AGG | - | chr4_1:78685852-78685871 | Msa0574930:intron | 35.0% |
| TGAATTCCCAGTGTTTGATA+AGG | - | chr4_1:78685883-78685902 | Msa0574930:intron | 35.0% | |
| GTAATCACCTTATCAAACAC+TGG | + | chr4_1:78685893-78685912 | None:intergenic | 35.0% | |
| !! | TTTTTGAAGGATCAGAAAGG+AGG | - | chr4_1:78686171-78686190 | Msa0574930:intron | 35.0% |
| GATCAGAAAGGAGGAATATT+TGG | - | chr4_1:78686180-78686199 | Msa0574930:intron | 35.0% | |
| AAAGGAGGAATATTTGGAGA+TGG | - | chr4_1:78686186-78686205 | Msa0574930:intron | 35.0% | |
| TATTTGGAGATGGTATCAAG+TGG | - | chr4_1:78686196-78686215 | Msa0574930:intron | 35.0% | |
| CTTAGTAAACAAAGAAGGGA+AGG | - | chr4_1:78686233-78686252 | Msa0574930:intron | 35.0% | |
| ! | TATCTAACCTCGATTTTCAG+AGG | + | chr4_1:78686288-78686307 | None:intergenic | 35.0% |
| !! | TTGTGCTTATATTTTAGGCC+AGG | - | chr4_1:78686313-78686332 | Msa0574930:intron | 35.0% |
| ! | AGGACATTGAGAAGCTTTTA+CGG | - | chr4_1:78686395-78686414 | Msa0574930:intron | 35.0% |
| GTGTGTGTTTCATTGAAAAG+AGG | + | chr4_1:78686614-78686633 | None:intergenic | 35.0% | |
| AGTTGTGGTAAGGGTTTATT+TGG | + | chr4_1:78686640-78686659 | None:intergenic | 35.0% | |
| ! | CATTCGCTATGACAGTATTT+TGG | + | chr4_1:78686747-78686766 | None:intergenic | 35.0% |
| CATTATTTGCTTGCATGATG+GGG | + | chr4_1:78686890-78686909 | None:intergenic | 35.0% | |
| AGAAAGGGCTTCCAAATAAA+TGG | + | chr4_1:78686994-78687013 | None:intergenic | 35.0% | |
| TCCAGGCCATAAATTAACTA+GGG | + | chr4_1:78687133-78687152 | None:intergenic | 35.0% | |
| TTCCAGGCCATAAATTAACT+AGG | + | chr4_1:78687134-78687153 | None:intergenic | 35.0% | |
| !! | ATTTGGTGTTCTCACTTTCT+TGG | - | chr4_1:78687199-78687218 | Msa0574930:CDS | 35.0% |
| !! | CTTCCTTTTTGGCAACTTTA+TGG | + | chr4_1:78687357-78687376 | None:intergenic | 35.0% |
| CATAAAGTTGCCAAAAAGGA+AGG | - | chr4_1:78687355-78687374 | Msa0574930:five_prime_UTR | 35.0% | |
| ! | CAAACTTTACCCTTCCTTTT+TGG | + | chr4_1:78687368-78687387 | None:intergenic | 35.0% |
| TTCATTCATATGGGTGAGGA+CGG | + | chr4_1:78683977-78683996 | None:intergenic | 40.0% | |
| !! | ACACACAGTTGTTGACTTTC+TGG | - | chr4_1:78684106-78684125 | Msa0574930:three_prime_UTR | 40.0% |
| ! | GGATGAATTTTCGGCCATTT+TGG | + | chr4_1:78684193-78684212 | None:intergenic | 40.0% |
| CTTGACAGTGAAATCGTAGA+TGG | + | chr4_1:78684220-78684239 | None:intergenic | 40.0% | |
| CATCTACGATTTCACTGTCA+AGG | - | chr4_1:78684218-78684237 | Msa0574930:three_prime_UTR | 40.0% | |
| CTACAATTGCAGGATATCAG+TGG | - | chr4_1:78684368-78684387 | Msa0574930:intron | 40.0% | |
| TCTGAGTCAATACAGAGGAA+AGG | - | chr4_1:78684403-78684422 | Msa0574930:intron | 40.0% | |
| TTGTCAATGTTGCCTCACAA+TGG | - | chr4_1:78684435-78684454 | Msa0574930:intron | 40.0% | |
| TAAGCACTCAAACAGTCAAG+AGG | + | chr4_1:78685171-78685190 | None:intergenic | 40.0% | |
| TTGACTGTTTGAGTGCTTAG+AGG | - | chr4_1:78685172-78685191 | Msa0574930:CDS | 40.0% | |
| TTTGAGTGCTTAGAGGTTTG+TGG | - | chr4_1:78685179-78685198 | Msa0574930:CDS | 40.0% | |
| !!! | GTTTTTGTTGCTTGGTTTGG+AGG | - | chr4_1:78685213-78685232 | Msa0574930:CDS | 40.0% |
| CAAAACAATTACCCACGAAG+GGG | + | chr4_1:78685302-78685321 | None:intergenic | 40.0% | |
| AAAACAATTGGGGGTGAGAT+TGG | - | chr4_1:78685393-78685412 | Msa0574930:intron | 40.0% | |
| ATCTGACACTGTAAAGCCTT+AGG | - | chr4_1:78685445-78685464 | Msa0574930:intron | 40.0% | |
| ! | TTGCTTTGGCTTAGATCCTA+AGG | + | chr4_1:78685464-78685483 | None:intergenic | 40.0% |
| CAACAAAGAAGTCGTTGCTT+TGG | + | chr4_1:78685478-78685497 | None:intergenic | 40.0% | |
| CAAAGCAACGACTTCTTTGT+TGG | - | chr4_1:78685476-78685495 | Msa0574930:intron | 40.0% | |
| GACCTTGATCCTTATACTTC+TGG | + | chr4_1:78685664-78685683 | None:intergenic | 40.0% | |
| GTTTGGACTCTCGATATACT+TGG | - | chr4_1:78685979-78685998 | Msa0574930:intron | 40.0% | |
| AAACAAAGAAGGGAAGGTTG+TGG | - | chr4_1:78686239-78686258 | Msa0574930:intron | 40.0% | |
| TACTGTCATAGCGAATGTGT+TGG | - | chr4_1:78686750-78686769 | Msa0574930:intron | 40.0% | |
| ACTGTCATAGCGAATGTGTT+GGG | - | chr4_1:78686751-78686770 | Msa0574930:intron | 40.0% | |
| GACTCAATTGTGCAGTGTAT+TGG | + | chr4_1:78686861-78686880 | None:intergenic | 40.0% | |
| GACGAAGAAATAGAATAGCG+CGG | + | chr4_1:78686933-78686952 | None:intergenic | 40.0% | |
| TTCAACGCTTTCATAGGAGA+AGG | - | chr4_1:78687081-78687100 | Msa0574930:intron | 40.0% | |
| TCCCTAGTTAATTTATGGCC+TGG | - | chr4_1:78687129-78687148 | Msa0574930:intron | 40.0% | |
| CGAAAAAGTCATCACTCAGA+GGG | + | chr4_1:78687323-78687342 | None:intergenic | 40.0% | |
| ! | CCTCTGAGTGATGACTTTTT+CGG | - | chr4_1:78687321-78687340 | Msa0574930:five_prime_UTR | 40.0% |
| ! | AAGGAAGGGTAAAGTTTGCT+TGG | - | chr4_1:78687370-78687389 | Msa0574930:five_prime_UTR | 40.0% |
| ! | AGGAAGGGTAAAGTTTGCTT+GGG | - | chr4_1:78687371-78687390 | Msa0574930:five_prime_UTR | 40.0% |
| GTGAGTCTGAGTCAATACAG+AGG | - | chr4_1:78684398-78684417 | Msa0574930:intron | 45.0% | |
| ATACAGAGGAAAGGTTCTGC+TGG | - | chr4_1:78684412-78684431 | Msa0574930:intron | 45.0% | |
| ! | CATATGTGCGACTTTAGAGG+TGG | + | chr4_1:78684720-78684739 | None:intergenic | 45.0% |
| AAGGTCCGTGACTTTAACCA+AGG | - | chr4_1:78685678-78685697 | Msa0574930:intron | 45.0% | |
| TTTCCATGCAACCAGTTTCG+TGG | - | chr4_1:78685803-78685822 | Msa0574930:intron | 45.0% | |
| GACATTTGGCACACTATGCA+TGG | - | chr4_1:78685946-78685965 | Msa0574930:intron | 45.0% | |
| !! | TGCATGGAGATGGTCTTGTT+TGG | - | chr4_1:78685962-78685981 | Msa0574930:intron | 45.0% |
| ! | AACCTCGATTTTCAGAGGAG+CGG | + | chr4_1:78686283-78686302 | None:intergenic | 45.0% |
| GCACAACGTACATAGAAACC+TGG | + | chr4_1:78686334-78686353 | None:intergenic | 45.0% | |
| AAGTCATCACTCAGAGGGAA+AGG | + | chr4_1:78687318-78687337 | None:intergenic | 45.0% | |
| CCGAAAAAGTCATCACTCAG+AGG | + | chr4_1:78687324-78687343 | None:intergenic | 45.0% | |
| !! | TCTTATAATAATATAAAATA+CGG | - | chr4_1:78684054-78684073 | Msa0574930:three_prime_UTR | 5.0% |
| !! | TTAATATATCAAATTATTAT+AGG | - | chr4_1:78686110-78686129 | Msa0574930:intron | 5.0% |
| !! | AAAAAAAAAAAAAAAAAAGA+AGG | + | chr4_1:78687041-78687060 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTAC+AGG | - | chr4_1:78687044-78687063 | Msa0574930:intron | 5.0% |
| CGAAGTATAGCTGGCACCTA+TGG | - | chr4_1:78684851-78684870 | Msa0574930:intron | 50.0% | |
| ! | TTTTGTTCTTGGCCCCTTCG+TGG | - | chr4_1:78685287-78685306 | Msa0574930:intron | 50.0% |
| TTTGTTCTTGGCCCCTTCGT+GGG | - | chr4_1:78685288-78685307 | Msa0574930:intron | 50.0% | |
| TGTCCACGAAACTGGTTGCA+TGG | + | chr4_1:78685809-78685828 | None:intergenic | 50.0% | |
| ATGCAACCAGTTTCGTGGAC+AGG | - | chr4_1:78685808-78685827 | Msa0574930:intron | 50.0% | |
| TGGCACACTATGCATGGAGA+TGG | - | chr4_1:78685952-78685971 | Msa0574930:intron | 50.0% | |
| ! | ATTTTCAGAGGAGCGGTGGT+AGG | + | chr4_1:78686276-78686295 | None:intergenic | 50.0% |
| ! | TTGCTTGCATGATGGGGAGT+GGG | + | chr4_1:78686884-78686903 | None:intergenic | 50.0% |
| ! | TTTGCTTGCATGATGGGGAG+TGG | + | chr4_1:78686885-78686904 | None:intergenic | 50.0% |
| CTGGTTCCTGTCCACGAAAC+TGG | + | chr4_1:78685817-78685836 | None:intergenic | 55.0% | |
| CAGTTTCGTGGACAGGAACC+AGG | - | chr4_1:78685815-78685834 | Msa0574930:intron | 55.0% | |
| ! | CTCGATTTTCAGAGGAGCGG+TGG | + | chr4_1:78686280-78686299 | None:intergenic | 55.0% |
| ! | CACCGCTCCTCTGAAAATCG+AGG | - | chr4_1:78686278-78686297 | Msa0574930:intron | 55.0% |
| ! | TGCTTGCATGATGGGGAGTG+GGG | + | chr4_1:78686883-78686902 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 78683964 | 78687418 | 78683964 | ID=Msa0574930;Name=Msa0574930 |
| chr4_1 | mRNA | 78683964 | 78687418 | 78683964 | ID=Msa0574930-mRNA-1;Parent=Msa0574930;Name=Msa0574930-mRNA-1;_AED=0.07;_eAED=0.07;_QI=138|1|1|1|0.83|0.85|7|377|198 |
| chr4_1 | exon | 78683964 | 78684316 | 78683964 | ID=Msa0574930-mRNA-1:exon:27963;Parent=Msa0574930-mRNA-1 |
| chr4_1 | exon | 78684932 | 78684988 | 78684932 | ID=Msa0574930-mRNA-1:exon:27962;Parent=Msa0574930-mRNA-1 |
| chr4_1 | exon | 78685083 | 78685250 | 78685083 | ID=Msa0574930-mRNA-1:exon:27961;Parent=Msa0574930-mRNA-1 |
| chr4_1 | exon | 78685478 | 78685596 | 78685478 | ID=Msa0574930-mRNA-1:exon:27960;Parent=Msa0574930-mRNA-1 |
| chr4_1 | exon | 78685702 | 78685763 | 78685702 | ID=Msa0574930-mRNA-1:exon:27959;Parent=Msa0574930-mRNA-1 |
| chr4_1 | exon | 78686926 | 78687002 | 78686926 | ID=Msa0574930-mRNA-1:exon:27958;Parent=Msa0574930-mRNA-1 |
| chr4_1 | exon | 78687143 | 78687418 | 78687143 | ID=Msa0574930-mRNA-1:exon:27957;Parent=Msa0574930-mRNA-1 |
| chr4_1 | five_prime_UTR | 78687281 | 78687418 | 78687281 | ID=Msa0574930-mRNA-1:five_prime_utr;Parent=Msa0574930-mRNA-1 |
| chr4_1 | CDS | 78687143 | 78687280 | 78687143 | ID=Msa0574930-mRNA-1:cds;Parent=Msa0574930-mRNA-1 |
| chr4_1 | CDS | 78686926 | 78687002 | 78686926 | ID=Msa0574930-mRNA-1:cds;Parent=Msa0574930-mRNA-1 |
| chr4_1 | CDS | 78685702 | 78685763 | 78685702 | ID=Msa0574930-mRNA-1:cds;Parent=Msa0574930-mRNA-1 |
| chr4_1 | CDS | 78685478 | 78685596 | 78685478 | ID=Msa0574930-mRNA-1:cds;Parent=Msa0574930-mRNA-1 |
| chr4_1 | CDS | 78685083 | 78685250 | 78685083 | ID=Msa0574930-mRNA-1:cds;Parent=Msa0574930-mRNA-1 |
| chr4_1 | CDS | 78684956 | 78684988 | 78684956 | ID=Msa0574930-mRNA-1:cds;Parent=Msa0574930-mRNA-1 |
| chr4_1 | three_prime_UTR | 78684932 | 78684955 | 78684932 | ID=Msa0574930-mRNA-1:three_prime_utr;Parent=Msa0574930-mRNA-1 |
| chr4_1 | three_prime_UTR | 78683964 | 78684316 | 78683964 | ID=Msa0574930-mRNA-1:three_prime_utr;Parent=Msa0574930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
