AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0333970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0333970 MtrunA17_Chr2g0318441 96.024 327 13 0 1 327 1 327 0.0 640
Msa0333970 MtrunA17_Chr6g0457251 31.928 166 110 2 144 306 206 371 6.22e-20 89.7
Msa0333970 MtrunA17_Chr6g0472501 31.677 161 104 3 133 292 94 249 5.59e-13 68.6
Msa0333970 MtrunA17_Chr2g0332941 29.452 146 96 3 151 290 103 247 2.62e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0333970 AT1G25290.2 58.528 299 116 2 23 313 25 323 5.73e-122 354
Msa0333970 AT1G25290.1 56.863 306 117 3 23 313 25 330 2.00e-118 345
Msa0333970 AT5G38510.2 32.258 155 104 1 142 295 216 370 8.42e-17 81.3
Msa0333970 AT5G38510.3 32.258 155 104 1 142 295 216 370 8.42e-17 81.3
Msa0333970 AT5G38510.1 32.258 155 104 1 142 295 216 370 8.42e-17 81.3
Msa0333970 AT1G77860.1 32.558 172 107 5 142 310 111 276 2.25e-15 76.3
Msa0333970 AT1G77860.2 32.558 172 107 5 142 310 111 276 2.73e-15 76.3
Msa0333970 AT1G63120.1 30.380 158 106 3 151 305 104 260 3.83e-13 69.7
Msa0333970 AT5G07250.1 32.168 143 95 2 149 290 126 267 2.03e-12 67.8
Msa0333970 AT2G29050.1 30.719 153 102 3 147 296 119 270 2.60e-12 67.4
Msa0333970 AT1G52580.1 31.034 145 90 3 145 283 94 234 5.08e-12 66.2
Msa0333970 AT1G12750.4 31.915 141 94 2 151 290 91 230 8.60e-12 65.5
Msa0333970 AT1G12750.7 31.915 141 94 2 151 290 91 230 8.60e-12 65.5
Msa0333970 AT1G12750.6 31.915 141 94 2 151 290 91 230 8.60e-12 65.5
Msa0333970 AT1G12750.3 31.915 141 94 2 151 290 91 230 8.60e-12 65.5
Msa0333970 AT1G12750.1 31.915 141 94 2 151 290 91 230 8.60e-12 65.5

Find 115 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCACATTATAGTTCATTT+TGG 0.165320 2_4:+52050576 None:intergenic
GTCCACTTCCTTCCATTAAA+TGG 0.175610 2_4:+52053583 None:intergenic
ACATAAGTTAAAGGGGTTTC+AGG 0.225941 2_4:+52050694 None:intergenic
GTATTTCTCATGCAGCTTAT+TGG 0.251876 2_4:-52051940 Msa0333970:intron
TATTTCTCATGCAGCTTATT+GGG 0.272605 2_4:-52051939 Msa0333970:intron
AGTGGGACCAACTGAATTTA+AGG 0.276075 2_4:+52052840 None:intergenic
AAGTATGCAACATAAGTTAA+AGG 0.285351 2_4:+52050685 None:intergenic
ATTGCTGCATCATGGCTTAT+TGG 0.290926 2_4:-52050965 Msa0333970:CDS
GAAACATTTCATCGGCCTAT+TGG 0.295999 2_4:-52050831 Msa0333970:three_prime_UTR
TGTTTAGATTGAAGGATAAA+TGG 0.318157 2_4:-52053759 Msa0333970:CDS
CATCAACTGGCATTGACAAC+TGG 0.321814 2_4:-52051912 Msa0333970:CDS
ACCATTCAAATATTCTCTTA+AGG 0.329000 2_4:+52050728 None:intergenic
TGCTCCCGTGTTTAGATTGA+AGG 0.329417 2_4:-52053767 Msa0333970:CDS
GCATTTCCAGAGCTGGCTTC+AGG 0.332234 2_4:+52053631 None:intergenic
GGGAGACACGGTGGCTGAAA+TGG 0.347067 2_4:+52054637 None:intergenic
CAGGTGCAGCTATGAGTTAT+TGG 0.355414 2_4:-52052675 Msa0333970:CDS
AGTATGCAACATAAGTTAAA+GGG 0.361682 2_4:+52050686 None:intergenic
TTTCTCCAGATTCATTGTTT+CGG 0.366404 2_4:+52050454 None:intergenic
CCCACTGTGGAGAGCTTTAG+TGG 0.376144 2_4:-52052823 Msa0333970:CDS
AATTCAATCCTTTGAGTTGA+AGG 0.377772 2_4:+52053725 None:intergenic
CCATTCAAATATTCTCTTAA+GGG 0.378361 2_4:+52050729 None:intergenic
ACAAGTAATTGCCCTCAATA+TGG 0.389857 2_4:-52052304 Msa0333970:intron
AACATCCGAAACAATGAATC+TGG 0.390173 2_4:-52050459 Msa0333970:three_prime_UTR
CATGAATCCACATCTTTAGA+TGG 0.393473 2_4:-52050929 Msa0333970:CDS
TGCAAATATTGGACACCTAA+TGG 0.395874 2_4:-52052959 Msa0333970:intron
AGATTCATTGTTTCGGATGT+TGG 0.399746 2_4:+52050461 None:intergenic
TCTACTTCGTTCCTGTCTCC+AGG 0.414096 2_4:-52054595 Msa0333970:intron
CCCACCTGGATGCACCGCTC+CGG 0.417368 2_4:-52050505 Msa0333970:three_prime_UTR
CTTATTGGGTTATCATCAAC+TGG 0.417736 2_4:-52051925 Msa0333970:CDS
TCTTAAGGGAAGCTTACAAC+AGG 0.420919 2_4:+52050743 None:intergenic
GAAATGGAGGGACGCGGCGG+TGG 0.422096 2_4:+52054653 None:intergenic
TTTCAGTTAGGAGGCTTGAT+TGG 0.428722 2_4:-52050992 Msa0333970:intron
ATCTTGAAGAGATTATATAT+TGG 0.429421 2_4:+52050881 None:intergenic
CTGTCACCGGTTTGCAAGGT+GGG 0.434972 2_4:-52054699 Msa0333970:CDS
TGTTTCTATTTCCATGGCTT+AGG 0.437025 2_4:+52050848 None:intergenic
CCCACGACAAAAGCTTGCCT+TGG 0.437216 2_4:+52053136 None:intergenic
CATAAGTTAAAGGGGTTTCA+GGG 0.437219 2_4:+52050695 None:intergenic
TGAGTCGGCATTTCCAGAGC+TGG 0.439376 2_4:+52053624 None:intergenic
CCACCCGGAGCGGTGCATCC+AGG 0.442660 2_4:+52050501 None:intergenic
TTGCAAACCGGTGACAGAAA+TGG 0.444522 2_4:+52054705 None:intergenic
GCTTGCGCTTGTAATCCAAT+AGG 0.449056 2_4:+52050816 None:intergenic
CCACCTGGATGCACCGCTCC+GGG 0.451604 2_4:-52050504 Msa0333970:three_prime_UTR
TTAAGGCACAAAGACCTTGT+AGG 0.451701 2_4:-52052357 Msa0333970:CDS
ATGCCTGCAGTAGGTGCGTC+AGG 0.452126 2_4:-52052643 Msa0333970:CDS
AACCGGTGACAGAAATGGCT+TGG 0.460775 2_4:+52054710 None:intergenic
CCCTTAAGAGAATATTTGAA+TGG 0.461614 2_4:-52050729 Msa0333970:three_prime_UTR
GGAAGACCTGAAGCCAGCTC+TGG 0.461947 2_4:-52053637 Msa0333970:CDS
GCGGTGCATCCAGGTGGGAT+TGG 0.462658 2_4:+52050510 None:intergenic
TATCTTCAATTGTCAAGTGA+TGG 0.464338 2_4:-52053703 Msa0333970:CDS
GCCCAAGCCATTTCTGTCAC+CGG 0.466220 2_4:-52054712 Msa0333970:CDS
ATGAAATGTTTCTATTTCCA+TGG 0.474316 2_4:+52050842 None:intergenic
CCACGACAAAAGCTTGCCTT+GGG 0.477575 2_4:+52053137 None:intergenic
GGTTTAGGTTGGATCGGTTG+CGG 0.482114 2_4:-52052388 Msa0333970:intron
ATCAACTGGCATTGACAACT+GGG 0.484122 2_4:-52051911 Msa0333970:CDS
ATCTTCAATTGTCAAGTGAT+GGG 0.485198 2_4:-52053702 Msa0333970:CDS
ACCGGTGACAGAAATGGCTT+GGG 0.501021 2_4:+52054711 None:intergenic
CAGTTAGGAGGCTTGATTGG+TGG 0.501779 2_4:-52050989 Msa0333970:CDS
TGTTACTCCTTAAATTCAGT+TGG 0.501810 2_4:-52052847 Msa0333970:CDS
TAAGGACCCACCTTGCAAAC+CGG 0.514465 2_4:+52054693 None:intergenic
GTAGAAAGTGAAGGCGGAGA+CGG 0.519386 2_4:+52054613 None:intergenic
ATGAGACACTTACCATATTG+AGG 0.528872 2_4:+52052292 None:intergenic
ATCCATTTAATGGAAGGAAG+TGG 0.533831 2_4:-52053585 Msa0333970:CDS
GGCGGAGACGGTGGGAGACA+CGG 0.537970 2_4:+52054625 None:intergenic
TCATTGACAAAGGACAACTT+TGG 0.538888 2_4:-52053008 Msa0333970:CDS
ATTTCTGTCACCGGTTTGCA+AGG 0.538917 2_4:-52054703 Msa0333970:CDS
GTGGATTCATGCTTCCATGC+AGG 0.542563 2_4:+52050941 None:intergenic
GAAAGTGAAGGCGGAGACGG+TGG 0.544225 2_4:+52054616 None:intergenic
TTGGTGGAATTGCTGCATCA+TGG 0.545395 2_4:-52050973 Msa0333970:CDS
GCTCCTGACGCACCTACTGC+AGG 0.547227 2_4:+52052640 None:intergenic
TGTAATGGTTTAGGTTGGAT+CGG 0.547688 2_4:-52052394 Msa0333970:intron
GCAATGATATCAAGTGGGTA+AGG 0.550443 2_4:+52054675 None:intergenic
TAAATTGCAAGATATCTTCG+AGG 0.552516 2_4:+52052799 None:intergenic
AACTGGAGAAGGGAAAGAAA+TGG 0.555191 2_4:-52054739 Msa0333970:exon
CACAAAGACCTTGTAGGAGG+TGG 0.557075 2_4:-52052351 Msa0333970:CDS
TCTTCTTCCATCTAAAGATG+TGG 0.558989 2_4:+52050922 None:intergenic
TGAGACACTTACCATATTGA+GGG 0.563701 2_4:+52052293 None:intergenic
CCCGGAGCGGTGCATCCAGG+TGG 0.563975 2_4:+52050504 None:intergenic
TTAAGAGAATATTTGAATGG+TGG 0.565446 2_4:-52050726 Msa0333970:three_prime_UTR
CCTGGATGCACCGCTCCGGG+TGG 0.566387 2_4:-52050501 Msa0333970:three_prime_UTR
CAAAGATGCCTTCAACTCAA+AGG 0.568006 2_4:-52053733 Msa0333970:CDS
CTCACAAAACATTGGCAGCA+AGG 0.571689 2_4:+52053551 None:intergenic
AGACACGGTGGCTGAAATGG+AGG 0.574356 2_4:+52054640 None:intergenic
CTGGATGCACCGCTCCGGGT+GGG 0.583511 2_4:-52050500 Msa0333970:three_prime_UTR
TCTGTCACCGGTTTGCAAGG+TGG 0.583568 2_4:-52054700 Msa0333970:CDS
CCACTAAAGCTCTCCACAGT+GGG 0.584557 2_4:+52052823 None:intergenic
TGGAAATAGAAACATTTCAT+CGG 0.586800 2_4:-52050839 Msa0333970:exon
GTGGCTGAAATGGAGGGACG+CGG 0.589774 2_4:+52054647 None:intergenic
GCGGTTACTTGCAATTGAAG+AGG 0.591639 2_4:+52052771 None:intergenic
GTTGCGCAACTTGCAACCCA+AGG 0.593062 2_4:-52053153 Msa0333970:CDS
GACACGGTGGCTGAAATGGA+GGG 0.603040 2_4:+52054641 None:intergenic
TTATCCTTCAATCTAAACAC+GGG 0.608819 2_4:+52053763 None:intergenic
TGCTCATACTCACAAAACAT+TGG 0.609078 2_4:+52053543 None:intergenic
CATGGCTTATTGGACCTGCA+TGG 0.609641 2_4:-52050955 Msa0333970:CDS
GTATGCAACATAAGTTAAAG+GGG 0.609786 2_4:+52050687 None:intergenic
TTACGAGAGGACCTAAGCCA+TGG 0.618911 2_4:-52050859 Msa0333970:CDS
CCGGAGCGGTGCATCCAGGT+GGG 0.620667 2_4:+52050505 None:intergenic
GCGGTGGCAATGATATCAAG+TGG 0.623394 2_4:+52054669 None:intergenic
ACCCAAAATGAACTATAATG+TGG 0.625351 2_4:-52050578 Msa0333970:three_prime_UTR
AATGATGTTGAATTCCCACC+CGG 0.626961 2_4:+52050486 None:intergenic
AGGCACAAAGACCTTGTAGG+AGG 0.629028 2_4:-52052354 Msa0333970:CDS
GTAAACAGTCTCATTGACAA+AGG 0.638755 2_4:-52053018 Msa0333970:CDS
GCTGAAATGGAGGGACGCGG+CGG 0.649712 2_4:+52054650 None:intergenic
TTTATCCTTCAATCTAAACA+CGG 0.650319 2_4:+52053762 None:intergenic
CTTAAGGGAAGCTTACAACA+GGG 0.652533 2_4:+52050744 None:intergenic
AAAGTGAAGGCGGAGACGGT+GGG 0.654962 2_4:+52054617 None:intergenic
CGGTGGCAATGATATCAAGT+GGG 0.662467 2_4:+52054670 None:intergenic
AACGAAGTAGAAAGTGAAGG+CGG 0.666662 2_4:+52054607 None:intergenic
AGGAACGAAGTAGAAAGTGA+AGG 0.668444 2_4:+52054604 None:intergenic
TGTTGAATTCCCACCCGGAG+CGG 0.669454 2_4:+52050491 None:intergenic
AATCTCTTCAAGATTACGAG+AGG 0.669871 2_4:-52050872 Msa0333970:CDS
TTCTGCAAAATGCCTGCAGT+AGG 0.702369 2_4:-52052652 Msa0333970:CDS
AAATTCAGTTGGTCCCACTG+TGG 0.708926 2_4:-52052836 Msa0333970:CDS
GGAGACGGTGGGAGACACGG+TGG 0.711069 2_4:+52054628 None:intergenic
ACCACTAAAGCTCTCCACAG+TGG 0.711367 2_4:+52052822 None:intergenic
TCAACTGGCATTGACAACTG+GGG 0.722807 2_4:-52051910 Msa0333970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTTTTTTTAAAA+TGG + chr2_4:52052704-52052723 None:intergenic 0.0%
!!! TATATTTTTTCTTCTTATTT+AGG - chr2_4:52053118-52053137 Msa0333970:intron 10.0%
!! TAAGAAAATGAAAAATTTAA+GGG + chr2_4:52053386-52053405 None:intergenic 10.0%
!!! TTAATGTTGATGATTAAAAT+GGG - chr2_4:52050827-52050846 Msa0333970:three_prime_UTR 15.0%
!!! AAAGTAAAATTGTTTTTGTA+TGG - chr2_4:52050910-52050929 Msa0333970:CDS 15.0%
!!! AAGTAAAATTGTTTTTGTAT+GGG - chr2_4:52050911-52050930 Msa0333970:CDS 15.0%
!!! ATTATTGATTAACAAATCAA+AGG + chr2_4:52051855-52051874 None:intergenic 15.0%
!!! ATTATGGAATTAGAATATTT+TGG + chr2_4:52052521-52052540 None:intergenic 15.0%
!!! TTTTTTTTTAAAATGGTTCA+GGG + chr2_4:52052697-52052716 None:intergenic 15.0%
!!! ATTTTTTTTTAAAATGGTTC+AGG + chr2_4:52052698-52052717 None:intergenic 15.0%
!! CTAAGAAAATGAAAAATTTA+AGG + chr2_4:52053387-52053406 None:intergenic 15.0%
!!! TTTATTCACTTTTTAAAATG+TGG - chr2_4:52053466-52053485 Msa0333970:intron 15.0%
!!! AAATTGCAAAAATTTTGACT+TGG - chr2_4:52050683-52050702 Msa0333970:three_prime_UTR 20.0%
!!! TAGTTATATTTTCCTCATTT+AGG - chr2_4:52050731-52050750 Msa0333970:three_prime_UTR 20.0%
!!! GTTAATGTTGATGATTAAAA+TGG - chr2_4:52050826-52050845 Msa0333970:three_prime_UTR 20.0%
!! ATGATACAATCACTTAATTA+AGG + chr2_4:52051087-52051106 None:intergenic 20.0%
!!! TTTTTATTAGTTCTCTATGA+TGG + chr2_4:52051196-52051215 None:intergenic 20.0%
!!! AAATACTTGTTAGATTGTTT+GGG + chr2_4:52051314-52051333 None:intergenic 20.0%
!!! TAAATACTTGTTAGATTGTT+TGG + chr2_4:52051315-52051334 None:intergenic 20.0%
!!! TTTTAATACAAAACTAAACC+AGG + chr2_4:52052334-52052353 None:intergenic 20.0%
!! TATTGTAGGAATAATATAAG+CGG + chr2_4:52052478-52052497 None:intergenic 20.0%
!!! TTTTTTTTAAAATGGTTCAG+GGG + chr2_4:52052696-52052715 None:intergenic 20.0%
!! TTATTTAGGAAATGTTTGTT+CGG - chr2_4:52053132-52053151 Msa0333970:CDS 20.0%
!!! AATAAATGAGGGTATAATAA+TGG + chr2_4:52053715-52053734 None:intergenic 20.0%
!!! ATTAATTGTGTTGATTTTGA+TGG + chr2_4:52053810-52053829 None:intergenic 20.0%
!! CTGAAAAATGTATATGTTAA+TGG + chr2_4:52054221-52054240 None:intergenic 20.0%
!!! AACATATACATTTTTCAGTT+AGG - chr2_4:52054223-52054242 Msa0333970:intron 20.0%
!! ATCTTGAAGAGATTATATAT+TGG + chr2_4:52054349-52054368 None:intergenic 20.0%
!!! AAGAAGCCAATTTTTTTTTG+CGG - chr2_4:52050465-52050484 Msa0333970:three_prime_UTR 25.0%
! TTCTTTCTATAACCTAAATG+AGG + chr2_4:52050746-52050765 None:intergenic 25.0%
! ATAGAAAGAAACCATTGAAA+TGG - chr2_4:52050756-52050775 Msa0333970:three_prime_UTR 25.0%
! ACTTAAATACTCCATTTCAA+TGG + chr2_4:52050770-52050789 None:intergenic 25.0%
!! TTGATGATTAAAATGGGAAT+AGG - chr2_4:52050833-52050852 Msa0333970:three_prime_UTR 25.0%
! AATTAAGGATATGTTTGGAT+TGG + chr2_4:52051072-52051091 None:intergenic 25.0%
! CACTTAATTAAGGATATGTT+TGG + chr2_4:52051077-52051096 None:intergenic 25.0%
! TTTATCCTTCAATCTAAACA+CGG + chr2_4:52051468-52051487 None:intergenic 25.0%
! TGTTTAGATTGAAGGATAAA+TGG - chr2_4:52051468-52051487 Msa0333970:intron 25.0%
!!! GCTAGTTTCTCTTTTTTTAA+TGG - chr2_4:52051566-52051585 Msa0333970:intron 25.0%
!!! AGTTTCTCTTTTTTTAATGG+AGG - chr2_4:52051569-52051588 Msa0333970:intron 25.0%
! TCCAGAAAAAATCCATTTAA+TGG - chr2_4:52051632-52051651 Msa0333970:intron 25.0%
!!! TCCATTAAATGGATTTTTTC+TGG + chr2_4:52051636-52051655 None:intergenic 25.0%
! GAAAAAATCCATTTAATGGA+AGG - chr2_4:52051636-52051655 Msa0333970:intron 25.0%
! AAACTTAATACACCAATCAA+GGG + chr2_4:52051714-52051733 None:intergenic 25.0%
! TAAACTTAATACACCAATCA+AGG + chr2_4:52051715-52051734 None:intergenic 25.0%
! AGTGAAAAGAAAGAAAAACA+AGG - chr2_4:52051778-52051797 Msa0333970:intron 25.0%
! GTGAAAAGAAAGAAAAACAA+GGG - chr2_4:52051779-52051798 Msa0333970:intron 25.0%
! CAGAAAAATGAAGAGAAAAA+TGG + chr2_4:52051950-52051969 None:intergenic 25.0%
!! GTATCTAAAATTGTGAAAAG+AGG + chr2_4:52051998-52052017 None:intergenic 25.0%
! TTAATTCAAATCCTACCATT+AGG + chr2_4:52052286-52052305 None:intergenic 25.0%
!!! ATTAGAATATTTTGGAGGTA+AGG + chr2_4:52052513-52052532 None:intergenic 25.0%
!!! ATGGAATTAGAATATTTTGG+AGG + chr2_4:52052518-52052537 None:intergenic 25.0%
!! TCCATAATTTCTAGAAAATC+AGG - chr2_4:52052533-52052552 Msa0333970:intron 25.0%
!!! ACCTGATTTTCTAGAAATTA+TGG + chr2_4:52052537-52052556 None:intergenic 25.0%
! GACTTGTATCAAGTAAAATA+AGG + chr2_4:52052674-52052693 None:intergenic 25.0%
!! AGTTTTCTATCTTCTCTATA+TGG + chr2_4:52052769-52052788 None:intergenic 25.0%
! AAAACAGTGAAGAAAGATAA+AGG + chr2_4:52052803-52052822 None:intergenic 25.0%
! TAAGTTGTTTATCTTAGTTG+AGG + chr2_4:52053542-52053561 None:intergenic 25.0%
! GGATGAAATTCAATAAATGA+GGG + chr2_4:52053726-52053745 None:intergenic 25.0%
! TGGATGAAATTCAATAAATG+AGG + chr2_4:52053727-52053746 None:intergenic 25.0%
! TCCACTAACTACAATTAATA+AGG - chr2_4:52053757-52053776 Msa0333970:CDS 25.0%
! CCACTAACTACAATTAATAA+GGG - chr2_4:52053758-52053777 Msa0333970:CDS 25.0%
! CTCTAAATAATAGTCGTTTA+AGG + chr2_4:52053858-52053877 None:intergenic 25.0%
! TAAACACTTATGAAACTGTT+TGG + chr2_4:52053990-52054009 None:intergenic 25.0%
!!! AAAATGGATAGTCTTATACA+CGG + chr2_4:52054107-52054126 None:intergenic 25.0%
!!! ATCCATTTTGTTATGTATGT+AGG - chr2_4:52054118-52054137 Msa0333970:intron 25.0%
!!! ATATACATTTTTCAGTTAGG+AGG - chr2_4:52054226-52054245 Msa0333970:intron 25.0%
!! ATGAAATGTTTCTATTTCCA+TGG + chr2_4:52054388-52054407 None:intergenic 25.0%
! TGGAAATAGAAACATTTCAT+CGG - chr2_4:52054388-52054407 Msa0333970:intron 25.0%
! CCATTCAAATATTCTCTTAA+GGG + chr2_4:52054501-52054520 None:intergenic 25.0%
! ACCATTCAAATATTCTCTTA+AGG + chr2_4:52054502-52054521 None:intergenic 25.0%
! TTAAGAGAATATTTGAATGG+TGG - chr2_4:52054501-52054520 Msa0333970:intron 25.0%
! AGTATGCAACATAAGTTAAA+GGG + chr2_4:52054544-52054563 None:intergenic 25.0%
! AAGTATGCAACATAAGTTAA+AGG + chr2_4:52054545-52054564 None:intergenic 25.0%
TTATCTACTGACATAAGCAA+TGG + chr2_4:52051038-52051057 None:intergenic 30.0%
CTAACAAGTATTTATGACAG+TGG - chr2_4:52051321-52051340 Msa0333970:intron 30.0%
TTATCCTTCAATCTAAACAC+GGG + chr2_4:52051467-52051486 None:intergenic 30.0%
!! AATTCAATCCTTTGAGTTGA+AGG + chr2_4:52051505-52051524 None:intergenic 30.0%
TATCTTCAATTGTCAAGTGA+TGG - chr2_4:52051524-52051543 Msa0333970:intron 30.0%
ATCTTCAATTGTCAAGTGAT+GGG - chr2_4:52051525-52051544 Msa0333970:intron 30.0%
GTTTATGACTTCCTAGAATT+TGG - chr2_4:52051730-52051749 Msa0333970:intron 30.0%
CAGTACAAACTATTCAAATC+CGG + chr2_4:52051927-52051946 None:intergenic 30.0%
! TCACAATTTTAGATACCTCT+TGG - chr2_4:52052002-52052021 Msa0333970:intron 30.0%
AATAGATATGATCTGTGTTG+TGG - chr2_4:52052150-52052169 Msa0333970:intron 30.0%
! TCTTTTCTGCATGCAAATAT+TGG - chr2_4:52052257-52052276 Msa0333970:intron 30.0%
TGTTACTCCTTAAATTCAGT+TGG - chr2_4:52052380-52052399 Msa0333970:CDS 30.0%
TAAATTGCAAGATATCTTCG+AGG + chr2_4:52052431-52052450 None:intergenic 30.0%
TCTATATGGAAAACCAAGAT+AGG + chr2_4:52052755-52052774 None:intergenic 30.0%
! GTTTTTCTAATGAGCTGTAA+TGG - chr2_4:52052818-52052837 Msa0333970:CDS 30.0%
TATGGATGTGACTTATAGAT+GGG - chr2_4:52053225-52053244 Msa0333970:intron 30.0%
TATTTCTCATGCAGCTTATT+GGG - chr2_4:52053288-52053307 Msa0333970:intron 30.0%
AAGTGACAATTATTGTGAGA+CGG + chr2_4:52053660-52053679 None:intergenic 30.0%
CCCTTATTAATTGTAGTTAG+TGG + chr2_4:52053761-52053780 None:intergenic 30.0%
GACTATTATTTAGAGACAGA+GGG - chr2_4:52053863-52053882 Msa0333970:intron 30.0%
TCAAAAAAGTCAATCCAAAC+AGG - chr2_4:52054024-52054043 Msa0333970:intron 30.0%
ATACACGGAATACAAAATTG+AGG + chr2_4:52054092-52054111 None:intergenic 30.0%
TGCCTACATACATAACAAAA+TGG + chr2_4:52054123-52054142 None:intergenic 30.0%
CCCTTAAGAGAATATTTGAA+TGG - chr2_4:52054498-52054517 Msa0333970:intron 30.0%
GTATGCAACATAAGTTAAAG+GGG + chr2_4:52054543-52054562 None:intergenic 30.0%
!! TTGCATACTTTTGTTGTACA+TGG - chr2_4:52054555-52054574 Msa0333970:intron 30.0%
!! TGCATACTTTTGTTGTACAT+GGG - chr2_4:52054556-52054575 Msa0333970:intron 30.0%
AAAAATCATCCATACAAGCA+AGG + chr2_4:52054608-52054627 None:intergenic 30.0%
!!! TGCTTGTATGGATGATTTTT+TGG - chr2_4:52054608-52054627 Msa0333970:CDS 30.0%
!!! GCTTGTATGGATGATTTTTT+GGG - chr2_4:52054609-52054628 Msa0333970:CDS 30.0%
!!! ATAGTTCATTTTGGGTTGTA+GGG + chr2_4:52054645-52054664 None:intergenic 30.0%
!!! TATAGTTCATTTTGGGTTGT+AGG + chr2_4:52054646-52054665 None:intergenic 30.0%
ACCCAAAATGAACTATAATG+TGG - chr2_4:52054649-52054668 Msa0333970:CDS 30.0%
! GCCACATTATAGTTCATTTT+GGG + chr2_4:52054653-52054672 None:intergenic 30.0%
! TGCCACATTATAGTTCATTT+TGG + chr2_4:52054654-52054673 None:intergenic 30.0%
TTTCTCCAGATTCATTGTTT+CGG + chr2_4:52054776-52054795 None:intergenic 30.0%
CCAGTTCCGCAAAAAAAAAT+TGG + chr2_4:52050474-52050493 None:intergenic 35.0%
!!! CCAATTTTTTTTTGCGGAAC+TGG - chr2_4:52050471-52050490 Msa0333970:three_prime_UTR 35.0%
GAGTGAATAAAAAGAAGACC+TGG + chr2_4:52050653-52050672 None:intergenic 35.0%
AATAGGAAGTAGCTCATGTT+TGG - chr2_4:52050850-52050869 Msa0333970:exon 35.0%
!! CTTGTTTTCACAAGCTATCT+TGG - chr2_4:52050940-52050959 Msa0333970:CDS 35.0%
!! TGTTTGGATTGGCTTATTTG+AGG + chr2_4:52051061-52051080 None:intergenic 35.0%
AAGAAAGAAGAGACACAAAC+GGG + chr2_4:52051377-52051396 None:intergenic 35.0%
GAAGAAAGAAGAGACACAAA+CGG + chr2_4:52051378-52051397 None:intergenic 35.0%
!! CTCTTCTTTCTTCTGAAATC+TGG - chr2_4:52051385-52051404 Msa0333970:intron 35.0%
! TTTTCTGGACATCTTTGAGT+CGG + chr2_4:52051621-52051640 None:intergenic 35.0%
ATCCATTTAATGGAAGGAAG+TGG - chr2_4:52051642-52051661 Msa0333970:intron 35.0%
TGCTCATACTCACAAAACAT+TGG + chr2_4:52051687-52051706 None:intergenic 35.0%
TATGAGCATATTCCCTTGAT+TGG - chr2_4:52051699-52051718 Msa0333970:intron 35.0%
AGAAAGCAAAGTGAGCATTA+TGG + chr2_4:52051878-52051897 None:intergenic 35.0%
GTTGTGTTGTGTATGTTACT+AGG - chr2_4:52052187-52052206 Msa0333970:intron 35.0%
GTAAACAGTCTCATTGACAA+AGG - chr2_4:52052209-52052228 Msa0333970:intron 35.0%
TCATTGACAAAGGACAACTT+TGG - chr2_4:52052219-52052238 Msa0333970:intron 35.0%
TGCAAATATTGGACACCTAA+TGG - chr2_4:52052268-52052287 Msa0333970:intron 35.0%
AATATTGGACACCTAATGGT+AGG - chr2_4:52052272-52052291 Msa0333970:intron 35.0%
! GGAATTTCATTGGCTATTGT+AGG + chr2_4:52052492-52052511 None:intergenic 35.0%
TTGGAGGTAAGGAATTTCAT+TGG + chr2_4:52052502-52052521 None:intergenic 35.0%
AAGATAGAAAACTGAGATGC+TGG - chr2_4:52052776-52052795 Msa0333970:intron 35.0%
CTAATGAGCTGTAATGGTTT+AGG - chr2_4:52052824-52052843 Msa0333970:CDS 35.0%
!! TGTAATGGTTTAGGTTGGAT+CGG - chr2_4:52052833-52052852 Msa0333970:CDS 35.0%
ACAAGTAATTGCCCTCAATA+TGG - chr2_4:52052923-52052942 Msa0333970:intron 35.0%
TGAGACACTTACCATATTGA+GGG + chr2_4:52052937-52052956 None:intergenic 35.0%
ATGAGACACTTACCATATTG+AGG + chr2_4:52052938-52052957 None:intergenic 35.0%
!!! TGTTAGTTTTGCAACTTCAC+TGG - chr2_4:52052984-52053003 Msa0333970:CDS 35.0%
GTAAAATTTCTGTTCCACTG+TGG + chr2_4:52053054-52053073 None:intergenic 35.0%
TAACTTAGACCATCACTCTA+TGG - chr2_4:52053207-52053226 Msa0333970:intron 35.0%
CTATGGATGTGACTTATAGA+TGG - chr2_4:52053224-52053243 Msa0333970:intron 35.0%
TTTCCTTGTCTGTGTTCTAA+CGG - chr2_4:52053259-52053278 Msa0333970:intron 35.0%
GTATTTCTCATGCAGCTTAT+TGG - chr2_4:52053287-52053306 Msa0333970:intron 35.0%
CTTATTGGGTTATCATCAAC+TGG - chr2_4:52053302-52053321 Msa0333970:intron 35.0%
AAGGGCAGTAAAAAAATCCA+TGG + chr2_4:52053368-52053387 None:intergenic 35.0%
CCTTTGTTCAGTAAAAGTTG+CGG - chr2_4:52053409-52053428 Msa0333970:intron 35.0%
CTTTGTTCAGTAAAAGTTGC+GGG - chr2_4:52053410-52053429 Msa0333970:intron 35.0%
AGTTAGTGGAGTAGTTAAGT+TGG + chr2_4:52053747-52053766 None:intergenic 35.0%
AGGTTTATGCACGGTTATTA+AGG + chr2_4:52053838-52053857 None:intergenic 35.0%
! AGTCGTTTAAGGTTTATGCA+CGG + chr2_4:52053847-52053866 None:intergenic 35.0%
CGACTATTATTTAGAGACAG+AGG - chr2_4:52053862-52053881 Msa0333970:intron 35.0%
TTTCTATCATGATGAGCTTG+TGG - chr2_4:52053911-52053930 Msa0333970:intron 35.0%
AACAAGCTGATGACAACTTA+TGG - chr2_4:52053935-52053954 Msa0333970:intron 35.0%
GAAACTGTTTGGAAGACTTA+TGG + chr2_4:52053979-52053998 None:intergenic 35.0%
!! ACATAGTTTTTAGGCCTGTT+TGG + chr2_4:52054041-52054060 None:intergenic 35.0%
AAACAGGCCTAAAAACTATG+TGG - chr2_4:52054040-52054059 Msa0333970:intron 35.0%
! TCCATGTCCACATAGTTTTT+AGG + chr2_4:52054050-52054069 None:intergenic 35.0%
! TTTGTTATGTATGTAGGCAC+TGG - chr2_4:52054124-52054143 Msa0333970:intron 35.0%
AAACTATGCACAGATTACAC+TGG + chr2_4:52054178-52054197 None:intergenic 35.0%
CATGAATCCACATCTTTAGA+TGG - chr2_4:52054298-52054317 Msa0333970:intron 35.0%
TCTTCTTCCATCTAAAGATG+TGG + chr2_4:52054308-52054327 None:intergenic 35.0%
AATCTCTTCAAGATTACGAG+AGG - chr2_4:52054355-52054374 Msa0333970:intron 35.0%
! TGTTTCTATTTCCATGGCTT+AGG + chr2_4:52054382-52054401 None:intergenic 35.0%
CATAAGTTAAAGGGGTTTCA+GGG + chr2_4:52054535-52054554 None:intergenic 35.0%
ACATAAGTTAAAGGGGTTTC+AGG + chr2_4:52054536-52054555 None:intergenic 35.0%
!! GCATACTTTTGTTGTACATG+GGG - chr2_4:52054557-52054576 Msa0333970:intron 35.0%
!! GTTTGTTTTCCTTGCTTGTA+TGG - chr2_4:52054596-52054615 Msa0333970:CDS 35.0%
!!! ATGGATGATTTTTTGGGTCT+AGG - chr2_4:52054615-52054634 Msa0333970:CDS 35.0%
AGATTCATTGTTTCGGATGT+TGG + chr2_4:52054769-52054788 None:intergenic 35.0%
AACATCCGAAACAATGAATC+TGG - chr2_4:52054768-52054787 Msa0333970:five_prime_UTR 35.0%
!!! TTTTTTTGCGGAACTGGAGA+AGG - chr2_4:52050477-52050496 Msa0333970:three_prime_UTR 40.0%
!!! TTTTTTGCGGAACTGGAGAA+GGG - chr2_4:52050478-52050497 Msa0333970:three_prime_UTR 40.0%
AACTGGAGAAGGGAAAGAAA+TGG - chr2_4:52050488-52050507 Msa0333970:three_prime_UTR 40.0%
GCAATGATATCAAGTGGGTA+AGG + chr2_4:52050555-52050574 None:intergenic 40.0%
AACGAAGTAGAAAGTGAAGG+CGG + chr2_4:52050623-52050642 None:intergenic 40.0%
AGGAACGAAGTAGAAAGTGA+AGG + chr2_4:52050626-52050645 None:intergenic 40.0%
TAAAAAGAAGACCTGGAGAC+AGG + chr2_4:52050646-52050665 None:intergenic 40.0%
AGACTGTTTGAGAGAGCTTA+TGG + chr2_4:52051260-52051279 None:intergenic 40.0%
AGAAAGAAGAGACACAAACG+GGG + chr2_4:52051376-52051395 None:intergenic 40.0%
!! CTTCTGAAATCTGGATGTTG+CGG - chr2_4:52051394-52051413 Msa0333970:intron 40.0%
CAAAGATGCCTTCAACTCAA+AGG - chr2_4:52051494-52051513 Msa0333970:intron 40.0%
GTCCACTTCCTTCCATTAAA+TGG + chr2_4:52051647-52051666 None:intergenic 40.0%
! CTTTAGAGGAGCCAAATTCT+AGG + chr2_4:52051744-52051763 None:intergenic 40.0%
TTACACTCCACTCACTTTAG+AGG + chr2_4:52051758-52051777 None:intergenic 40.0%
AGTGGGACCAACTGAATTTA+AGG + chr2_4:52052390-52052409 None:intergenic 40.0%
TCAAACGTACTTGTCTCTCT+TGG - chr2_4:52052726-52052745 Msa0333970:intron 40.0%
TCTCTCTTGGATTCCTATCT+TGG - chr2_4:52052739-52052758 Msa0333970:intron 40.0%
TGAGCTGTAATGGTTTAGGT+TGG - chr2_4:52052828-52052847 Msa0333970:CDS 40.0%
TTAAGGCACAAAGACCTTGT+AGG - chr2_4:52052870-52052889 Msa0333970:intron 40.0%
!!! CTTTTTTACCACCTCCTACA+AGG + chr2_4:52052887-52052906 None:intergenic 40.0%
GCAGAATCAGAAGTAACACA+GGG + chr2_4:52052962-52052981 None:intergenic 40.0%
AGCAGAATCAGAAGTAACAC+AGG + chr2_4:52052963-52052982 None:intergenic 40.0%
!! TTGTTCGGTAGAAGTGTTGT+TGG - chr2_4:52053147-52053166 Msa0333970:CDS 40.0%
!! AAGTGTTGTTGGTTCATGCA+AGG - chr2_4:52053158-52053177 Msa0333970:CDS 40.0%
!! AGTGTTGTTGGTTCATGCAA+GGG - chr2_4:52053159-52053178 Msa0333970:CDS 40.0%
AAGTCACATCCATAGAGTGA+TGG + chr2_4:52053219-52053238 None:intergenic 40.0%
!! ATCAACTGGCATTGACAACT+GGG - chr2_4:52053316-52053335 Msa0333970:intron 40.0%
! CCGCAACTTTTACTGAACAA+AGG + chr2_4:52053412-52053431 None:intergenic 40.0%
!!! TTTTAAAATGTGGCGTGACC+TGG - chr2_4:52053476-52053495 Msa0333970:intron 40.0%
! CTCGAATTTAGAGTCATTCC+AGG + chr2_4:52053497-52053516 None:intergenic 40.0%
GACAATTATTGTGAGACGGA+GGG + chr2_4:52053656-52053675 None:intergenic 40.0%
TGACAATTATTGTGAGACGG+AGG + chr2_4:52053657-52053676 None:intergenic 40.0%
GCCTAAAAACTATGTGGACA+TGG - chr2_4:52054046-52054065 Msa0333970:intron 40.0%
TTTCAGTTAGGAGGCTTGAT+TGG - chr2_4:52054235-52054254 Msa0333970:intron 40.0%
ATTGCTGCATCATGGCTTAT+TGG - chr2_4:52054262-52054281 Msa0333970:intron 40.0%
GAAACATTTCATCGGCCTAT+TGG - chr2_4:52054396-52054415 Msa0333970:intron 40.0%
CTTAAGGGAAGCTTACAACA+GGG + chr2_4:52054486-52054505 None:intergenic 40.0%
TCTTAAGGGAAGCTTACAAC+AGG + chr2_4:52054487-52054506 None:intergenic 40.0%
!! GTTTTTCAGAATGGTAGCGA+AGG + chr2_4:52054698-52054717 None:intergenic 40.0%
!!! GTGGGATTGGTTTTTCAGAA+TGG + chr2_4:52054707-52054726 None:intergenic 40.0%
AATGATGTTGAATTCCCACC+CGG + chr2_4:52054744-52054763 None:intergenic 40.0%
TTGCAAACCGGTGACAGAAA+TGG + chr2_4:52050525-52050544 None:intergenic 45.0%
!! ATTTCTGTCACCGGTTTGCA+AGG - chr2_4:52050524-52050543 Msa0333970:three_prime_UTR 45.0%
CGGTGGCAATGATATCAAGT+GGG + chr2_4:52050560-52050579 None:intergenic 45.0%
CAAGAGAGACATGTGAGTCA+AGG + chr2_4:52051427-52051446 None:intergenic 45.0%
TGCTCCCGTGTTTAGATTGA+AGG - chr2_4:52051460-52051479 Msa0333970:intron 45.0%
CTCACAAAACATTGGCAGCA+AGG + chr2_4:52051679-52051698 None:intergenic 45.0%
!! TTTGGCTCCTCTAAAGTGAG+TGG - chr2_4:52051748-52051767 Msa0333970:intron 45.0%
CAATAAGCACTCTCACCAAG+AGG + chr2_4:52052020-52052039 None:intergenic 45.0%
CAGGCATGACAGAACAAACT+TGG + chr2_4:52052315-52052334 None:intergenic 45.0%
! CAAGTTTGTTCTGTCATGCC+TGG - chr2_4:52052313-52052332 Msa0333970:CDS 45.0%
AAATTCAGTTGGTCCCACTG+TGG - chr2_4:52052391-52052410 Msa0333970:intron 45.0%
GCGGTTACTTGCAATTGAAG+AGG + chr2_4:52052459-52052478 None:intergenic 45.0%
CAGGTGCAGCTATGAGTTAT+TGG - chr2_4:52052552-52052571 Msa0333970:intron 45.0%
TTCTGCAAAATGCCTGCAGT+AGG - chr2_4:52052575-52052594 Msa0333970:intron 45.0%
!!! CGGTTGCGGTGTTTGTTTTA+AGG - chr2_4:52052853-52052872 Msa0333970:CDS 45.0%
AGTTATCACGAGACAGTGTG+TGG - chr2_4:52053011-52053030 Msa0333970:CDS 45.0%
! ATGCTTCTGATTAGCCACAG+TGG - chr2_4:52053037-52053056 Msa0333970:intron 45.0%
GGTTCATGCAAGGGTTATGT+CGG - chr2_4:52053168-52053187 Msa0333970:intron 45.0%
GTTCATGCAAGGGTTATGTC+GGG - chr2_4:52053169-52053188 Msa0333970:intron 45.0%
!! CATCAACTGGCATTGACAAC+TGG - chr2_4:52053315-52053334 Msa0333970:intron 45.0%
!! TCAACTGGCATTGACAACTG+GGG - chr2_4:52053317-52053336 Msa0333970:intron 45.0%
AACTGGGGACATGTAAGTGT+AGG - chr2_4:52053332-52053351 Msa0333970:intron 45.0%
! GTGTAGGAGTGTATCATCCA+TGG - chr2_4:52053348-52053367 Msa0333970:intron 45.0%
TTGGTGGAATTGCTGCATCA+TGG - chr2_4:52054254-52054273 Msa0333970:intron 45.0%
GCTTGCGCTTGTAATCCAAT+AGG + chr2_4:52054414-52054433 None:intergenic 45.0%
TCTGAAAAACCAATCCCACC+TGG - chr2_4:52054708-52054727 Msa0333970:CDS 45.0%
ACCGGTGACAGAAATGGCTT+GGG + chr2_4:52050519-52050538 None:intergenic 50.0%
AACCGGTGACAGAAATGGCT+TGG + chr2_4:52050520-52050539 None:intergenic 50.0%
TAAGGACCCACCTTGCAAAC+CGG + chr2_4:52050537-52050556 None:intergenic 50.0%
GCGGTGGCAATGATATCAAG+TGG + chr2_4:52050561-52050580 None:intergenic 50.0%
GTAGAAAGTGAAGGCGGAGA+CGG + chr2_4:52050617-52050636 None:intergenic 50.0%
TCTACTTCGTTCCTGTCTCC+AGG - chr2_4:52050632-52050651 Msa0333970:three_prime_UTR 50.0%
GTTGCTCGCTTCAAATGAGC+CGG - chr2_4:52051905-52051924 Msa0333970:intron 50.0%
CCACGACAAAAGCTTGCCTT+GGG + chr2_4:52052093-52052112 None:intergenic 50.0%
! CCAAGGCAAGCTTTTGTCGT+GGG - chr2_4:52052091-52052110 Msa0333970:intron 50.0%
! CAAGGCAAGCTTTTGTCGTG+GGG - chr2_4:52052092-52052111 Msa0333970:intron 50.0%
CCACTAAAGCTCTCCACAGT+GGG + chr2_4:52052407-52052426 None:intergenic 50.0%
ACCACTAAAGCTCTCCACAG+TGG + chr2_4:52052408-52052427 None:intergenic 50.0%
! GGTGCGTCAGGAGCAATTTT+TGG - chr2_4:52052596-52052615 Msa0333970:intron 50.0%
!! GGTTTAGGTTGGATCGGTTG+CGG - chr2_4:52052839-52052858 Msa0333970:CDS 50.0%
AGGCACAAAGACCTTGTAGG+AGG - chr2_4:52052873-52052892 Msa0333970:intron 50.0%
CACAAAGACCTTGTAGGAGG+TGG - chr2_4:52052876-52052895 Msa0333970:intron 50.0%
GCACCGTTAGAACACAGACA+AGG + chr2_4:52053265-52053284 None:intergenic 50.0%
CAGTTAGGAGGCTTGATTGG+TGG - chr2_4:52054238-52054257 Msa0333970:intron 50.0%
CATGGCTTATTGGACCTGCA+TGG - chr2_4:52054272-52054291 Msa0333970:intron 50.0%
GTGGATTCATGCTTCCATGC+AGG + chr2_4:52054289-52054308 None:intergenic 50.0%
TTACGAGAGGACCTAAGCCA+TGG - chr2_4:52054368-52054387 Msa0333970:intron 50.0%
GCCCAAGCCATTTCTGTCAC+CGG - chr2_4:52050515-52050534 Msa0333970:three_prime_UTR 55.0%
!! TCTGTCACCGGTTTGCAAGG+TGG - chr2_4:52050527-52050546 Msa0333970:three_prime_UTR 55.0%
!! CTGTCACCGGTTTGCAAGGT+GGG - chr2_4:52050528-52050547 Msa0333970:three_prime_UTR 55.0%
GACACGGTGGCTGAAATGGA+GGG + chr2_4:52050589-52050608 None:intergenic 55.0%
AGACACGGTGGCTGAAATGG+AGG + chr2_4:52050590-52050609 None:intergenic 55.0%
AAAGTGAAGGCGGAGACGGT+GGG + chr2_4:52050613-52050632 None:intergenic 55.0%
! GCATTTCCAGAGCTGGCTTC+AGG + chr2_4:52051599-52051618 None:intergenic 55.0%
TGAGTCGGCATTTCCAGAGC+TGG + chr2_4:52051606-52051625 None:intergenic 55.0%
GTTGCGCAACTTGCAACCCA+AGG - chr2_4:52052074-52052093 Msa0333970:intron 55.0%
! CCCAAGGCAAGCTTTTGTCG+TGG - chr2_4:52052090-52052109 Msa0333970:intron 55.0%
CCCACGACAAAAGCTTGCCT+TGG + chr2_4:52052094-52052113 None:intergenic 55.0%
! GCTTTTGTCGTGGGGAGCAA+AGG - chr2_4:52052100-52052119 Msa0333970:intron 55.0%
TGTCGTGGGGAGCAAAGGTA+AGG - chr2_4:52052105-52052124 Msa0333970:intron 55.0%
! CCCACTGTGGAGAGCTTTAG+TGG - chr2_4:52052404-52052423 Msa0333970:intron 55.0%
TGTTGAATTCCCACCCGGAG+CGG + chr2_4:52054739-52054758 None:intergenic 55.0%
GTGGCTGAAATGGAGGGACG+CGG + chr2_4:52050583-52050602 None:intergenic 60.0%
GGGAGACACGGTGGCTGAAA+TGG + chr2_4:52050593-52050612 None:intergenic 60.0%
GAAAGTGAAGGCGGAGACGG+TGG + chr2_4:52050614-52050633 None:intergenic 60.0%
GGAAGACCTGAAGCCAGCTC+TGG - chr2_4:52051590-52051609 Msa0333970:intron 60.0%
ATGCCTGCAGTAGGTGCGTC+AGG - chr2_4:52052584-52052603 Msa0333970:intron 60.0%
GCTGAAATGGAGGGACGCGG+CGG + chr2_4:52050580-52050599 None:intergenic 65.0%
GCTCCTGACGCACCTACTGC+AGG + chr2_4:52052590-52052609 None:intergenic 65.0%
GCGGTGCATCCAGGTGGGAT+TGG + chr2_4:52054720-52054739 None:intergenic 65.0%
GAAATGGAGGGACGCGGCGG+TGG + chr2_4:52050577-52050596 None:intergenic 70.0%
GGAGACGGTGGGAGACACGG+TGG + chr2_4:52050602-52050621 None:intergenic 70.0%
GGCGGAGACGGTGGGAGACA+CGG + chr2_4:52050605-52050624 None:intergenic 70.0%
CCGGAGCGGTGCATCCAGGT+GGG + chr2_4:52054725-52054744 None:intergenic 70.0%
CCCACCTGGATGCACCGCTC+CGG - chr2_4:52054722-52054741 Msa0333970:CDS 70.0%
CCACCTGGATGCACCGCTCC+GGG - chr2_4:52054723-52054742 Msa0333970:CDS 70.0%
CTGGATGCACCGCTCCGGGT+GGG - chr2_4:52054727-52054746 Msa0333970:exon 70.0%
CCCGGAGCGGTGCATCCAGG+TGG + chr2_4:52054726-52054745 None:intergenic 75.0%
CCACCCGGAGCGGTGCATCC+AGG + chr2_4:52054729-52054748 None:intergenic 75.0%
CCTGGATGCACCGCTCCGGG+TGG - chr2_4:52054726-52054745 Msa0333970:exon 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 52050442 52054807 52050442 ID=Msa0333970;Name=Msa0333970
chr2_4 mRNA 52050442 52054807 52050442 ID=Msa0333970-mRNA-1;Parent=Msa0333970;Name=Msa0333970-mRNA-1;_AED=0.09;_eAED=0.09;_QI=65|1|1|1|1|1|9|411|327
chr2_4 exon 52050442 52051008 52050442 ID=Msa0333970-mRNA-1:exon:15671;Parent=Msa0333970-mRNA-1
chr2_4 exon 52051906 52051947 52051906 ID=Msa0333970-mRNA-1:exon:15670;Parent=Msa0333970-mRNA-1
chr2_4 exon 52052305 52052403 52052305 ID=Msa0333970-mRNA-1:exon:15669;Parent=Msa0333970-mRNA-1
chr2_4 exon 52052627 52052694 52052627 ID=Msa0333970-mRNA-1:exon:15668;Parent=Msa0333970-mRNA-1
chr2_4 exon 52052779 52052875 52052779 ID=Msa0333970-mRNA-1:exon:15667;Parent=Msa0333970-mRNA-1
chr2_4 exon 52052960 52053040 52052960 ID=Msa0333970-mRNA-1:exon:15666;Parent=Msa0333970-mRNA-1
chr2_4 exon 52053128 52053182 52053128 ID=Msa0333970-mRNA-1:exon:15665;Parent=Msa0333970-mRNA-1
chr2_4 exon 52053556 52053794 52053556 ID=Msa0333970-mRNA-1:exon:15664;Parent=Msa0333970-mRNA-1
chr2_4 exon 52054596 52054807 52054596 ID=Msa0333970-mRNA-1:exon:15663;Parent=Msa0333970-mRNA-1
chr2_4 five_prime_UTR 52054743 52054807 52054743 ID=Msa0333970-mRNA-1:five_prime_utr;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52054596 52054742 52054596 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52053556 52053794 52053556 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52053128 52053182 52053128 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52052960 52053040 52052960 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52052779 52052875 52052779 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52052627 52052694 52052627 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52052305 52052403 52052305 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52051906 52051947 52051906 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 CDS 52050853 52051008 52050853 ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1
chr2_4 three_prime_UTR 52050442 52050852 52050442 ID=Msa0333970-mRNA-1:three_prime_utr;Parent=Msa0333970-mRNA-1
Gene Sequence

>Msa0333970

ATGGTTATGCCCAAGCCATTTCTGTCACCGGTTTGCAAGGTGGGTCCTTACCCACTTGATATCATTGCCACCGCCGCGTCCCTCCATTTCAGCCACCGTGTCTCCCACCGTCTCCGCCTTCACTTTCTACTTCGTTCCTGTCTCCAGAAACTTGCTCCCGTGTTTAGATTGAAGGATAAATGGTGTCAAAGATGCCTTCAACTCAAAGGATTGAATTATCTTCAATTGTCAAGTGATGGGTTGACTTCTGCATGTTCAGCTAGTTTCTCTTTTTTTAATGGAGGAAGACCTGAAGCCAGCTCTGGAAATGCCGACTCAAAGATGTCCAGAAAAAATCCATTTAATGGAAGGAAGTGGACAAATATTCTCCTTGCTGCCAATGTTTTATTTTATGTTGCGCAACTTGCAACCCAAGGCAAGCTTTTGTCGTGGGGAGCAAAGGTAAACAGTCTCATTGACAAAGGACAACTTTGGAGACTTGTTACATCTTCTTTTCTGCATGCAAATATTGGACACCTAATGATAAATTGTTACTCCTTAAATTCAGTTGGTCCCACTGTGGAGAGCTTTAGTGGTCCTCGAAGATATCTTGCAATTTACTTTGCCTCTTCAATTGCAAGTGCAGCTATGAGTTATTGGTTCTGCAAAATGCCTGCAGTAGGTGCGTCAGGAGCAATTTTTGGACTAGTTGGATCGGTTGCGGTGTTTGTTTTAAGGCACAAAGACCTTGTAGGAGGTGGTAAAAAAGATCTGCAGCACATTGCACAAGTAATTGCCCTCAATATGCTTATTGGGTTATCATCAACTGGCATTGACAACTGGGGACATTTAGGAGGCTTGATTGGTGGAATTGCTGCATCATGGCTTATTGGACCTGCATGGAAGCATGAATCCACATCTTTAGATGGAAGAAGACTTTTCATTGACAGTGCACCAATATATAATCTCTTCAAGATTACGAGAGGACCTAAGCCATGGAAATAG

Protein sequence

>Msa0333970

MVMPKPFLSPVCKVGPYPLDIIATAASLHFSHRVSHRLRLHFLLRSCLQKLAPVFRLKDKWCQRCLQLKGLNYLQLSSDGLTSACSASFSFFNGGRPEASSGNADSKMSRKNPFNGRKWTNILLAANVLFYVAQLATQGKLLSWGAKVNSLIDKGQLWRLVTSSFLHANIGHLMINCYSLNSVGPTVESFSGPRRYLAIYFASSIASAAMSYWFCKMPAVGASGAIFGLVGSVAVFVLRHKDLVGGGKKDLQHIAQVIALNMLIGLSSTGIDNWGHLGGLIGGIAASWLIGPAWKHESTSLDGRRLFIDSAPIYNLFKITRGPKPWK*