Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0333970 | XP_003596482.1 | 96.024 | 327 | 13 | 0 | 1 | 327 | 1 | 327 | 0.0 | 640 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0333970 | sp|F4ICF4|RBL10_ARATH | 56.863 | 306 | 117 | 3 | 23 | 313 | 25 | 330 | 1.96e-117 | 345 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003630 | Msa0333970 | -0.816511 | 5.325703e-52 | -8.615850e-47 |
Msa0008200 | Msa0333970 | -0.802313 | 5.952408e-49 | -8.615850e-47 |
Msa0010490 | Msa0333970 | -0.837729 | 4.377995e-57 | -8.615850e-47 |
Msa0010500 | Msa0333970 | -0.805631 | 1.216193e-49 | -8.615850e-47 |
Msa0012710 | Msa0333970 | -0.811829 | 5.756870e-51 | -8.615850e-47 |
Msa0023480 | Msa0333970 | -0.806460 | 8.140379e-50 | -8.615850e-47 |
Msa0030300 | Msa0333970 | -0.809117 | 2.217438e-50 | -8.615850e-47 |
Msa0036540 | Msa0333970 | -0.825175 | 5.410151e-54 | -8.615850e-47 |
Msa0037770 | Msa0333970 | -0.810198 | 1.298880e-50 | -8.615850e-47 |
Msa0043500 | Msa0333970 | -0.815662 | 8.241241e-52 | -8.615850e-47 |
Msa0043650 | Msa0333970 | -0.817325 | 3.497276e-52 | -8.615850e-47 |
Msa0043850 | Msa0333970 | -0.800841 | 1.192818e-48 | -8.615850e-47 |
Msa0043980 | Msa0333970 | -0.807631 | 4.600686e-50 | -8.615850e-47 |
Msa0046110 | Msa0333970 | 0.849565 | 2.979570e-60 | -8.615850e-47 |
Msa0051630 | Msa0333970 | -0.802992 | 4.311639e-49 | -8.615850e-47 |
Msa0051740 | Msa0333970 | -0.817512 | 3.173007e-52 | -8.615850e-47 |
Msa0051750 | Msa0333970 | -0.816684 | 4.872194e-52 | -8.615850e-47 |
Msa0054920 | Msa0333970 | -0.810890 | 9.202974e-51 | -8.615850e-47 |
Msa0058310 | Msa0333970 | -0.811406 | 7.113659e-51 | -8.615850e-47 |
Msa0059040 | Msa0333970 | -0.804537 | 2.059578e-49 | -8.615850e-47 |
Msa0059110 | Msa0333970 | -0.808353 | 3.228354e-50 | -8.615850e-47 |
Msa0071250 | Msa0333970 | -0.870160 | 1.799708e-66 | -8.615850e-47 |
Msa0077900 | Msa0333970 | -0.802928 | 4.445466e-49 | -8.615850e-47 |
Msa0081650 | Msa0333970 | -0.809254 | 2.072200e-50 | -8.615850e-47 |
Msa0090510 | Msa0333970 | -0.840889 | 6.624351e-58 | -8.615850e-47 |
Msa0090550 | Msa0333970 | -0.829871 | 4.038183e-55 | -8.615850e-47 |
Msa0092410 | Msa0333970 | -0.848837 | 4.750115e-60 | -8.615850e-47 |
Msa0096700 | Msa0333970 | -0.811762 | 5.954049e-51 | -8.615850e-47 |
Msa0100290 | Msa0333970 | -0.816802 | 4.582849e-52 | -8.615850e-47 |
Msa0104230 | Msa0333970 | -0.806831 | 6.796022e-50 | -8.615850e-47 |
Msa0106620 | Msa0333970 | -0.818221 | 2.194597e-52 | -8.615850e-47 |
Msa0106710 | Msa0333970 | -0.822419 | 2.392884e-53 | -8.615850e-47 |
Msa0115130 | Msa0333970 | -0.820081 | 8.281415e-53 | -8.615850e-47 |
Msa0115400 | Msa0333970 | -0.830214 | 3.331428e-55 | -8.615850e-47 |
Msa0117520 | Msa0333970 | -0.832004 | 1.210185e-55 | -8.615850e-47 |
Msa0118590 | Msa0333970 | -0.806676 | 7.326631e-50 | -8.615850e-47 |
Msa0125650 | Msa0333970 | -0.802328 | 5.910316e-49 | -8.615850e-47 |
Msa0127020 | Msa0333970 | -0.828005 | 1.143502e-54 | -8.615850e-47 |
Msa0138020 | Msa0333970 | -0.838340 | 3.048205e-57 | -8.615850e-47 |
Msa0138640 | Msa0333970 | -0.814101 | 1.828500e-51 | -8.615850e-47 |
Msa0139670 | Msa0333970 | -0.805556 | 1.260807e-49 | -8.615850e-47 |
Msa0142500 | Msa0333970 | -0.824670 | 7.118376e-54 | -8.615850e-47 |
Msa0144530 | Msa0333970 | -0.833141 | 6.324852e-56 | -8.615850e-47 |
Msa0145740 | Msa0333970 | -0.808453 | 3.073610e-50 | -8.615850e-47 |
Msa0149440 | Msa0333970 | -0.820400 | 6.997432e-53 | -8.615850e-47 |
Msa0152560 | Msa0333970 | -0.811888 | 5.587305e-51 | -8.615850e-47 |
Msa0160960 | Msa0333970 | -0.845422 | 4.101150e-59 | -8.615850e-47 |
Msa0169280 | Msa0333970 | -0.827289 | 1.698363e-54 | -8.615850e-47 |
Msa0179190 | Msa0333970 | -0.829438 | 5.147451e-55 | -8.615850e-47 |
Msa0183910 | Msa0333970 | -0.828233 | 1.007567e-54 | -8.615850e-47 |
Msa0186950 | Msa0333970 | -0.801249 | 9.843711e-49 | -8.615850e-47 |
Msa0187490 | Msa0333970 | -0.816493 | 5.374445e-52 | -8.615850e-47 |
Msa0187830 | Msa0333970 | -0.801474 | 8.850975e-49 | -8.615850e-47 |
Msa0197610 | Msa0333970 | -0.807259 | 5.516122e-50 | -8.615850e-47 |
Msa0202410 | Msa0333970 | -0.840111 | 1.058727e-57 | -8.615850e-47 |
Msa0205010 | Msa0333970 | -0.806355 | 8.565211e-50 | -8.615850e-47 |
Msa0207030 | Msa0333970 | -0.819039 | 1.431894e-52 | -8.615850e-47 |
Msa0216850 | Msa0333970 | 0.849403 | 3.307137e-60 | -8.615850e-47 |
Msa0217700 | Msa0333970 | -0.804451 | 2.146417e-49 | -8.615850e-47 |
Msa0220400 | Msa0333970 | 0.803459 | 3.450850e-49 | -8.615850e-47 |
Msa0233370 | Msa0333970 | -0.850311 | 1.843244e-60 | -8.615850e-47 |
Msa0234410 | Msa0333970 | 0.801139 | 1.036639e-48 | -8.615850e-47 |
Msa0240270 | Msa0333970 | -0.818477 | 1.920401e-52 | -8.615850e-47 |
Msa0240900 | Msa0333970 | -0.818628 | 1.774918e-52 | -8.615850e-47 |
Msa0241140 | Msa0333970 | -0.822881 | 1.868087e-53 | -8.615850e-47 |
Msa0244970 | Msa0333970 | -0.811826 | 5.765436e-51 | -8.615850e-47 |
Msa0262370 | Msa0333970 | -0.808899 | 2.468859e-50 | -8.615850e-47 |
Msa0269560 | Msa0333970 | -0.840318 | 9.343741e-58 | -8.615850e-47 |
Msa0278580 | Msa0333970 | -0.838267 | 3.182893e-57 | -8.615850e-47 |
Msa0285330 | Msa0333970 | -0.841772 | 3.879914e-58 | -8.615850e-47 |
Msa0295460 | Msa0333970 | 0.844509 | 7.236062e-59 | -8.615850e-47 |
Msa0296050 | Msa0333970 | 0.988955 | 4.314278e-176 | -8.615850e-47 |
Msa0300150 | Msa0333970 | -0.804523 | 2.073326e-49 | -8.615850e-47 |
Msa0303460 | Msa0333970 | -0.803483 | 3.411662e-49 | -8.615850e-47 |
Msa0303520 | Msa0333970 | -0.806773 | 6.990333e-50 | -8.615850e-47 |
Msa0305410 | Msa0333970 | -0.800544 | 1.371550e-48 | -8.615850e-47 |
Msa0307310 | Msa0333970 | -0.814461 | 1.523005e-51 | -8.615850e-47 |
Msa0308440 | Msa0333970 | -0.810141 | 1.336106e-50 | -8.615850e-47 |
Msa0311720 | Msa0333970 | -0.806765 | 7.016079e-50 | -8.615850e-47 |
Msa0317960 | Msa0333970 | -0.838420 | 2.906637e-57 | -8.615850e-47 |
Msa0317970 | Msa0333970 | -0.833195 | 6.130978e-56 | -8.615850e-47 |
Msa0321690 | Msa0333970 | -0.839966 | 1.154936e-57 | -8.615850e-47 |
Msa0322240 | Msa0333970 | -0.814974 | 1.171858e-51 | -8.615850e-47 |
Msa0324240 | Msa0333970 | -0.809487 | 1.846903e-50 | -8.615850e-47 |
Msa0333850 | Msa0333970 | 0.935751 | 5.173766e-97 | -8.615850e-47 |
Msa0333970 | Msa0357900 | -0.807452 | 5.020885e-50 | -8.615850e-47 |
Msa0333970 | Msa0364790 | -0.808017 | 3.807687e-50 | -8.615850e-47 |
Msa0333970 | Msa0374340 | 0.820050 | 8.417094e-53 | -8.615850e-47 |
Msa0333970 | Msa0378970 | -0.845807 | 3.224962e-59 | -8.615850e-47 |
Msa0333970 | Msa0386940 | -0.802818 | 4.683294e-49 | -8.615850e-47 |
Msa0333970 | Msa0387050 | -0.804521 | 2.075421e-49 | -8.615850e-47 |
Msa0333970 | Msa0388730 | -0.802062 | 6.702888e-49 | -8.615850e-47 |
Msa0333970 | Msa0389210 | -0.813476 | 2.511208e-51 | -8.615850e-47 |
Msa0333970 | Msa0389910 | -0.811084 | 8.355333e-51 | -8.615850e-47 |
Msa0333970 | Msa0403490 | -0.800513 | 1.391145e-48 | -8.615850e-47 |
Msa0333970 | Msa0403500 | -0.810956 | 8.904100e-51 | -8.615850e-47 |
Msa0333970 | Msa0403770 | -0.802833 | 4.649758e-49 | -8.615850e-47 |
Msa0333970 | Msa0408300 | -0.812705 | 3.705528e-51 | -8.615850e-47 |
Msa0333970 | Msa0422180 | -0.810040 | 1.404589e-50 | -8.615850e-47 |
Msa0333970 | Msa0427580 | -0.863923 | 1.759564e-64 | -8.615850e-47 |
Msa0333970 | Msa0428580 | -0.835114 | 2.025330e-56 | -8.615850e-47 |
Msa0333970 | Msa0430060 | -0.845695 | 3.458996e-59 | -8.615850e-47 |
Msa0333970 | Msa0430150 | -0.845499 | 3.910403e-59 | -8.615850e-47 |
Msa0333970 | Msa0449640 | 0.804614 | 1.984960e-49 | -8.615850e-47 |
Msa0333970 | Msa0450400 | 0.818901 | 1.538585e-52 | -8.615850e-47 |
Msa0333970 | Msa0474940 | -0.848283 | 6.763647e-60 | -8.615850e-47 |
Msa0333970 | Msa0476680 | -0.812152 | 4.894989e-51 | -8.615850e-47 |
Msa0333970 | Msa0480780 | -0.823069 | 1.689092e-53 | -8.615850e-47 |
Msa0333970 | Msa0481030 | -0.850002 | 2.249249e-60 | -8.615850e-47 |
Msa0333970 | Msa0481280 | -0.856948 | 2.276935e-62 | -8.615850e-47 |
Msa0333970 | Msa0481970 | -0.805779 | 1.132011e-49 | -8.615850e-47 |
Msa0333970 | Msa0482130 | -0.817118 | 3.891498e-52 | -8.615850e-47 |
Msa0333970 | Msa0482940 | -0.824258 | 8.898251e-54 | -8.615850e-47 |
Msa0333970 | Msa0495360 | -0.803200 | 3.904494e-49 | -8.615850e-47 |
Msa0333970 | Msa0500470 | -0.851576 | 8.114269e-61 | -8.615850e-47 |
Msa0333970 | Msa0502090 | -0.815906 | 7.269720e-52 | -8.615850e-47 |
Msa0333970 | Msa0518170 | -0.862398 | 5.213189e-64 | -8.615850e-47 |
Msa0333970 | Msa0519160 | -0.818679 | 1.728728e-52 | -8.615850e-47 |
Msa0333970 | Msa0521010 | -0.811534 | 6.673983e-51 | -8.615850e-47 |
Msa0333970 | Msa0521670 | -0.809967 | 1.456397e-50 | -8.615850e-47 |
Msa0333970 | Msa0523050 | -0.812121 | 4.973004e-51 | -8.615850e-47 |
Msa0333970 | Msa0532980 | -0.821014 | 5.058028e-53 | -8.615850e-47 |
Msa0333970 | Msa0534870 | -0.816095 | 6.597327e-52 | -8.615850e-47 |
Msa0333970 | Msa0539410 | -0.805128 | 1.550239e-49 | -8.615850e-47 |
Msa0333970 | Msa0542090 | -0.822116 | 2.814237e-53 | -8.615850e-47 |
Msa0333970 | Msa0542130 | -0.820189 | 7.824200e-53 | -8.615850e-47 |
Msa0333970 | Msa0542490 | -0.808222 | 3.442733e-50 | -8.615850e-47 |
Msa0333970 | Msa0544160 | -0.801536 | 8.596915e-49 | -8.615850e-47 |
Msa0333970 | Msa0544170 | -0.804005 | 2.658994e-49 | -8.615850e-47 |
Msa0333970 | Msa0554290 | -0.823618 | 1.257147e-53 | -8.615850e-47 |
Msa0333970 | Msa0560500 | -0.824464 | 7.956711e-54 | -8.615850e-47 |
Msa0333970 | Msa0562570 | -0.832994 | 6.880363e-56 | -8.615850e-47 |
Msa0333970 | Msa0562690 | -0.821289 | 4.369360e-53 | -8.615850e-47 |
Msa0333970 | Msa0566350 | -0.822483 | 2.312055e-53 | -8.615850e-47 |
Msa0333970 | Msa0566750 | -0.823564 | 1.294276e-53 | -8.615850e-47 |
Msa0333970 | Msa0569780 | -0.842972 | 1.865366e-58 | -8.615850e-47 |
Msa0333970 | Msa0572550 | 0.808165 | 3.541985e-50 | -8.615850e-47 |
Msa0333970 | Msa0576120 | 0.816117 | 6.524682e-52 | -8.615850e-47 |
Msa0333970 | Msa0581280 | -0.838605 | 2.604348e-57 | -8.615850e-47 |
Msa0333970 | Msa0583360 | 0.833114 | 6.420909e-56 | -8.615850e-47 |
Msa0333970 | Msa0588090 | -0.807505 | 4.892801e-50 | -8.615850e-47 |
Msa0333970 | Msa0605000 | -0.800078 | 1.706367e-48 | -8.615850e-47 |
Msa0333970 | Msa0610180 | -0.813801 | 2.129376e-51 | -8.615850e-47 |
Msa0333970 | Msa0610250 | -0.819677 | 1.024209e-52 | -8.615850e-47 |
Msa0333970 | Msa0618950 | -0.844539 | 7.101804e-59 | -8.615850e-47 |
Msa0333970 | Msa0618970 | -0.847460 | 1.140704e-59 | -8.615850e-47 |
Msa0333970 | Msa0624060 | -0.807535 | 4.821064e-50 | -8.615850e-47 |
Msa0333970 | Msa0631320 | -0.800742 | 1.249365e-48 | -8.615850e-47 |
Msa0333970 | Msa0647030 | -0.805863 | 1.087199e-49 | -8.615850e-47 |
Msa0333970 | Msa0652690 | -0.822776 | 1.977130e-53 | -8.615850e-47 |
Msa0333970 | Msa0657120 | -0.802266 | 6.087809e-49 | -8.615850e-47 |
Msa0333970 | Msa0658590 | -0.838087 | 3.541428e-57 | -8.615850e-47 |
Msa0333970 | Msa0658680 | -0.801363 | 9.328912e-49 | -8.615850e-47 |
Msa0333970 | Msa0659790 | -0.800876 | 1.173197e-48 | -8.615850e-47 |
Msa0333970 | Msa0660040 | -0.809266 | 2.059600e-50 | -8.615850e-47 |
Msa0333970 | Msa0665100 | -0.813092 | 3.049187e-51 | -8.615850e-47 |
Msa0333970 | Msa0667770 | -0.807670 | 4.513680e-50 | -8.615850e-47 |
Msa0333970 | Msa0667790 | -0.807389 | 5.177692e-50 | -8.615850e-47 |
Msa0333970 | Msa0672550 | -0.833928 | 4.023034e-56 | -8.615850e-47 |
Msa0333970 | Msa0673120 | -0.813782 | 2.150471e-51 | -8.615850e-47 |
Msa0333970 | Msa0685140 | -0.818208 | 2.210200e-52 | -8.615850e-47 |
Msa0333970 | Msa0689440 | -0.813845 | 2.082861e-51 | -8.615850e-47 |
Msa0333970 | Msa0691290 | -0.826529 | 2.580652e-54 | -8.615850e-47 |
Msa0333970 | Msa0701100 | -0.824985 | 5.997516e-54 | -8.615850e-47 |
Msa0333970 | Msa0702370 | -0.811953 | 5.409163e-51 | -8.615850e-47 |
Msa0333970 | Msa0702550 | -0.802020 | 6.840146e-49 | -8.615850e-47 |
Msa0333970 | Msa0703440 | -0.817406 | 3.351975e-52 | -8.615850e-47 |
Msa0333970 | Msa0703910 | -0.802965 | 4.366496e-49 | -8.615850e-47 |
Msa0333970 | Msa0705390 | -0.841820 | 3.768666e-58 | -8.615850e-47 |
Msa0333970 | Msa0705990 | -0.866676 | 2.394777e-65 | -8.615850e-47 |
Msa0333970 | Msa0709120 | -0.807171 | 5.758504e-50 | -8.615850e-47 |
Msa0333970 | Msa0709160 | -0.804076 | 2.570079e-49 | -8.615850e-47 |
Msa0333970 | Msa0711780 | -0.816891 | 4.376313e-52 | -8.615850e-47 |
Msa0333970 | Msa0712560 | -0.800639 | 1.311280e-48 | -8.615850e-47 |
Msa0333970 | Msa0724170 | -0.816744 | 4.722475e-52 | -8.615850e-47 |
Msa0333970 | Msa0724370 | -0.809654 | 1.700705e-50 | -8.615850e-47 |
Msa0333970 | Msa0738030 | -0.804591 | 2.006883e-49 | -8.615850e-47 |
Msa0333970 | Msa0738440 | -0.808386 | 3.176854e-50 | -8.615850e-47 |
Msa0333970 | Msa0741070 | -0.810299 | 1.234877e-50 | -8.615850e-47 |
Msa0333970 | Msa0741440 | -0.825136 | 5.526331e-54 | -8.615850e-47 |
Msa0333970 | Msa0745250 | 0.815569 | 8.644709e-52 | -8.615850e-47 |
Msa0333970 | Msa0750810 | -0.819512 | 1.116977e-52 | -8.615850e-47 |
Msa0333970 | Msa0754820 | -0.804234 | 2.382465e-49 | -8.615850e-47 |
Msa0333970 | Msa0763330 | -0.820075 | 8.305534e-53 | -8.615850e-47 |
Msa0333970 | Msa0763920 | -0.801103 | 1.054498e-48 | -8.615850e-47 |
Msa0333970 | Msa0764920 | -0.822597 | 2.175946e-53 | -8.615850e-47 |
Msa0333970 | Msa0771950 | -0.823436 | 1.386286e-53 | -8.615850e-47 |
Msa0333970 | Msa0772280 | -0.800655 | 1.301410e-48 | -8.615850e-47 |
Msa0333970 | Msa0786750 | -0.808165 | 3.541985e-50 | -8.615850e-47 |
Msa0333970 | Msa0795340 | -0.813872 | 2.053782e-51 | -8.615850e-47 |
Msa0333970 | Msa0800370 | -0.807643 | 4.572440e-50 | -8.615850e-47 |
Msa0333970 | Msa0817460 | -0.801113 | 1.049577e-48 | -8.615850e-47 |
Msa0333970 | Msa0817650 | -0.809685 | 1.674821e-50 | -8.615850e-47 |
Msa0333970 | Msa0822500 | -0.833728 | 4.514717e-56 | -8.615850e-47 |
Msa0333970 | Msa0823540 | -0.816301 | 5.934101e-52 | -8.615850e-47 |
Msa0333970 | Msa0826150 | -0.816755 | 4.694913e-52 | -8.615850e-47 |
Msa0333970 | Msa0830540 | -0.819553 | 1.093577e-52 | -8.615850e-47 |
Msa0333970 | Msa0844110 | -0.824209 | 9.137886e-54 | -8.615850e-47 |
Msa0333970 | Msa0844610 | -0.816028 | 6.830832e-52 | -8.615850e-47 |
Msa0333970 | Msa0858130 | -0.813558 | 2.409238e-51 | -8.615850e-47 |
Msa0333970 | Msa0863720 | -0.835656 | 1.477577e-56 | -8.615850e-47 |
Msa0333970 | Msa0865030 | -0.821564 | 3.776034e-53 | -8.615850e-47 |
Msa0333970 | Msa0867070 | 0.832316 | 1.013457e-55 | -8.615850e-47 |
Msa0333970 | Msa0880810 | -0.831301 | 1.804412e-55 | -8.615850e-47 |
Msa0333970 | Msa0894710 | -0.816098 | 6.587949e-52 | -8.615850e-47 |
Msa0333970 | Msa0902830 | -0.845693 | 3.464444e-59 | -8.615850e-47 |
Msa0333970 | Msa0921420 | -0.810937 | 8.992741e-51 | -8.615850e-47 |
Msa0333970 | Msa0936390 | -0.803132 | 4.033973e-49 | -8.615850e-47 |
Msa0333970 | Msa0945240 | -0.824403 | 8.226049e-54 | -8.615850e-47 |
Msa0333970 | Msa0945440 | -0.818219 | 2.197479e-52 | -8.615850e-47 |
Msa0333970 | Msa0954840 | -0.816762 | 4.678346e-52 | -8.615850e-47 |
Msa0333970 | Msa0970530 | -0.817020 | 4.095071e-52 | -8.615850e-47 |
Msa0333970 | Msa0970600 | -0.824043 | 9.997265e-54 | -8.615850e-47 |
Msa0333970 | Msa0992600 | -0.803044 | 4.206945e-49 | -8.615850e-47 |
Msa0333970 | Msa0994370 | -0.803411 | 3.530352e-49 | -8.615850e-47 |
Msa0333970 | Msa1024680 | -0.829603 | 4.693002e-55 | -8.615850e-47 |
Msa0333970 | Msa1034590 | -0.810656 | 1.034316e-50 | -8.615850e-47 |
Msa0333970 | Msa1042660 | -0.817585 | 3.054978e-52 | -8.615850e-47 |
Msa0333970 | Msa1059470 | -0.804720 | 1.886561e-49 | -8.615850e-47 |
Msa0333970 | Msa1062040 | -0.807677 | 4.497503e-50 | -8.615850e-47 |
Msa0333970 | Msa1063420 | -0.829631 | 4.620013e-55 | -8.615850e-47 |
Msa0333970 | Msa1070540 | -0.809603 | 1.744295e-50 | -8.615850e-47 |
Msa0333970 | Msa1074350 | -0.808049 | 3.749047e-50 | -8.615850e-47 |
Msa0333970 | Msa1080490 | -0.843203 | 1.618907e-58 | -8.615850e-47 |
Msa0333970 | Msa1088390 | -0.803923 | 2.765396e-49 | -8.615850e-47 |
Msa0333970 | Msa1089320 | -0.826396 | 2.775312e-54 | -8.615850e-47 |
Msa0333970 | Msa1089450 | -0.828117 | 1.074471e-54 | -8.615850e-47 |
Msa0333970 | Msa1089460 | -0.829159 | 6.015662e-55 | -8.615850e-47 |
Msa0333970 | Msa1093100 | -0.805408 | 1.354609e-49 | -8.615850e-47 |
Msa0333970 | Msa1096070 | -0.813220 | 2.857923e-51 | -8.615850e-47 |
Msa0333970 | Msa1101240 | -0.807451 | 5.022326e-50 | -8.615850e-47 |
Msa0333970 | Msa1107200 | -0.823010 | 1.743772e-53 | -8.615850e-47 |
Msa0333970 | Msa1108710 | -0.826014 | 3.422383e-54 | -8.615850e-47 |
Msa0333970 | Msa1109680 | -0.806000 | 1.017394e-49 | -8.615850e-47 |
Msa0333970 | Msa1123710 | 0.809862 | 1.533836e-50 | -8.615850e-47 |
Msa0333970 | Msa1126240 | -0.810626 | 1.049994e-50 | -8.615850e-47 |
Msa0333970 | Msa1128270 | -0.816976 | 4.189503e-52 | -8.615850e-47 |
Msa0333970 | Msa1132480 | -0.823143 | 1.622997e-53 | -8.615850e-47 |
Msa0333970 | Msa1137780 | -0.807501 | 4.901841e-50 | -8.615850e-47 |
Msa0333970 | Msa1143020 | -0.814151 | 1.783040e-51 | -8.615850e-47 |
Msa0333970 | Msa1144040 | -0.857656 | 1.406641e-62 | -8.615850e-47 |
Msa0333970 | Msa1150780 | -0.809777 | 1.600378e-50 | -8.615850e-47 |
Msa0333970 | Msa1155170 | 0.821059 | 4.937874e-53 | -8.615850e-47 |
Msa0333970 | Msa1158390 | -0.835900 | 1.281513e-56 | -8.615850e-47 |
Msa0333970 | Msa1160590 | -0.803902 | 2.792372e-49 | -8.615850e-47 |
Msa0333970 | Msa1162780 | -0.817423 | 3.323639e-52 | -8.615850e-47 |
Msa0333970 | Msa1167010 | -0.804444 | 2.154081e-49 | -8.615850e-47 |
Msa0333970 | Msa1169850 | 0.812148 | 4.904287e-51 | -8.615850e-47 |
Msa0333970 | Msa1181250 | -0.831856 | 1.317067e-55 | -8.615850e-47 |
Msa0333970 | Msa1181330 | -0.830566 | 2.732352e-55 | -8.615850e-47 |
Msa0333970 | Msa1183140 | -0.840214 | 9.952196e-58 | -8.615850e-47 |
Msa0333970 | Msa1185460 | -0.802617 | 5.151998e-49 | -8.615850e-47 |
Msa0333970 | Msa1196610 | 0.807604 | 4.660565e-50 | -8.615850e-47 |
Msa0333970 | Msa1206450 | 0.806738 | 7.111286e-50 | -8.615850e-47 |
Msa0333970 | Msa1206650 | -0.800687 | 1.282134e-48 | -8.615850e-47 |
Msa0333970 | Msa1207310 | -0.834511 | 2.873103e-56 | -8.615850e-47 |
Msa0333970 | Msa1209200 | -0.833531 | 5.055256e-56 | -8.615850e-47 |
Msa0333970 | Msa1209760 | -0.800745 | 1.247474e-48 | -8.615850e-47 |
Msa0333970 | Msa1214170 | -0.822759 | 1.994558e-53 | -8.615850e-47 |
Msa0333970 | Msa1218580 | -0.832945 | 7.073411e-56 | -8.615850e-47 |
Msa0333970 | Msa1225860 | 0.836436 | 9.370885e-57 | -8.615850e-47 |
Msa0333970 | Msa1226470 | -0.848107 | 7.565055e-60 | -8.615850e-47 |
Msa0333970 | Msa1229480 | -0.823705 | 1.199207e-53 | -8.615850e-47 |
Msa0333970 | Msa1236110 | 0.863786 | 1.941314e-64 | -8.615850e-47 |
Msa0333970 | Msa1236160 | 0.832682 | 8.221658e-56 | -8.615850e-47 |
Msa0333970 | Msa1236440 | -0.804503 | 2.093484e-49 | -8.615850e-47 |
Msa0333970 | Msa1237700 | -0.819294 | 1.252559e-52 | -8.615850e-47 |
Msa0333970 | Msa1246360 | -0.800079 | 1.705361e-48 | -8.615850e-47 |
Msa0333970 | Msa1250110 | -0.832216 | 1.072834e-55 | -8.615850e-47 |
Msa0333970 | Msa1250730 | -0.825057 | 5.766704e-54 | -8.615850e-47 |
Msa0333970 | Msa1259060 | -0.804109 | 2.529159e-49 | -8.615850e-47 |
Msa0333970 | Msa1260680 | -0.809190 | 2.138946e-50 | -8.615850e-47 |
Msa0333970 | Msa1266070 | 0.820226 | 7.669794e-53 | -8.615850e-47 |
Msa0333970 | Msa1270660 | -0.826163 | 3.154978e-54 | -8.615850e-47 |
Msa0333970 | Msa1270730 | -0.806987 | 6.298043e-50 | -8.615850e-47 |
Msa0333970 | Msa1272010 | -0.833808 | 4.310888e-56 | -8.615850e-47 |
Msa0333970 | Msa1291450 | -0.800319 | 1.523610e-48 | -8.615850e-47 |
Msa0333970 | Msa1303070 | -0.820452 | 6.809142e-53 | -8.615850e-47 |
Msa0333970 | Msa1307160 | -0.801905 | 7.221324e-49 | -8.615850e-47 |
Msa0333970 | Msa1307180 | -0.869271 | 3.508944e-66 | -8.615850e-47 |
Msa0333970 | Msa1309760 | -0.821302 | 4.341175e-53 | -8.615850e-47 |
Msa0333970 | Msa1315750 | -0.800141 | 1.656792e-48 | -8.615850e-47 |
Msa0333970 | Msa1316360 | -0.870467 | 1.427205e-66 | -8.615850e-47 |
Msa0333970 | Msa1325410 | 0.822584 | 2.190669e-53 | -8.615850e-47 |
Msa0333970 | Msa1332050 | -0.821409 | 4.099689e-53 | -8.615850e-47 |
Msa0333970 | Msa1336560 | -0.805750 | 1.147980e-49 | -8.615850e-47 |
Msa0333970 | Msa1346840 | -0.833834 | 4.247987e-56 | -8.615850e-47 |
Msa0333970 | Msa1349520 | -0.814199 | 1.740181e-51 | -8.615850e-47 |
Msa0333970 | Msa1355890 | -0.806933 | 6.467519e-50 | -8.615850e-47 |
Msa0333970 | Msa1358500 | -0.803060 | 4.174277e-49 | -8.615850e-47 |
Msa0333970 | Msa1359400 | -0.841060 | 5.973836e-58 | -8.615850e-47 |
Msa0333970 | Msa1359560 | -0.805730 | 1.159222e-49 | -8.615850e-47 |
Msa0333970 | Msa1360020 | -0.815192 | 1.048343e-51 | -8.615850e-47 |
Msa0333970 | Msa1363820 | 0.804591 | 2.006696e-49 | -8.615850e-47 |
Msa0333970 | Msa1364210 | -0.827359 | 1.634475e-54 | -8.615850e-47 |
Msa0333970 | Msa1368360 | -0.842936 | 1.906360e-58 | -8.615850e-47 |
Msa0333970 | Msa1369920 | 0.842198 | 2.994292e-58 | -8.615850e-47 |
Msa0333970 | Msa1370450 | -0.812209 | 4.757598e-51 | -8.615850e-47 |
Msa0333970 | Msa1370590 | -0.818144 | 2.284214e-52 | -8.615850e-47 |
Msa0333970 | Msa1377790 | -0.805180 | 1.512051e-49 | -8.615850e-47 |
Msa0333970 | Msa1378410 | -0.806450 | 8.176313e-50 | -8.615850e-47 |
Msa0333970 | Msa1382020 | -0.825794 | 3.859390e-54 | -8.615850e-47 |
Msa0333970 | Msa1382790 | -0.808366 | 3.208450e-50 | -8.615850e-47 |
Msa0333970 | Msa1383960 | -0.808992 | 2.358042e-50 | -8.615850e-47 |
Msa0333970 | Msa1384100 | -0.822540 | 2.242980e-53 | -8.615850e-47 |
Msa0333970 | Msa1393840 | 0.857807 | 1.268746e-62 | -8.615850e-47 |
Msa0333970 | Msa1395730 | -0.829044 | 6.415667e-55 | -8.615850e-47 |
Msa0333970 | Msa1400580 | -0.804809 | 1.807694e-49 | -8.615850e-47 |
Msa0333970 | Msa1406110 | 0.800329 | 1.516448e-48 | -8.615850e-47 |
Msa0333970 | Msa1407190 | -0.848619 | 5.460372e-60 | -8.615850e-47 |
Msa0333970 | Msa1407760 | -0.806108 | 9.655644e-50 | -8.615850e-47 |
Msa0333970 | Msa1407880 | -0.800937 | 1.140198e-48 | -8.615850e-47 |
Msa0333970 | Msa1411520 | 0.832622 | 8.510586e-56 | -8.615850e-47 |
Msa0333970 | Msa1412130 | -0.819464 | 1.145544e-52 | -8.615850e-47 |
Msa0333970 | Msa1413380 | -0.817152 | 3.824216e-52 | -8.615850e-47 |
Msa0333970 | Msa1419870 | -0.813043 | 3.124556e-51 | -8.615850e-47 |
Msa0333970 | Msa1423540 | -0.839116 | 1.920957e-57 | -8.615850e-47 |
Msa0333970 | Msa1425260 | -0.814366 | 1.597964e-51 | -8.615850e-47 |
Msa0333970 | Msa1428780 | -0.837639 | 4.615557e-57 | -8.615850e-47 |
Msa0333970 | Msa1430130 | -0.819041 | 1.430231e-52 | -8.615850e-47 |
Msa0333970 | Msa1430550 | -0.825317 | 5.006728e-54 | -8.615850e-47 |
Msa0333970 | Msa1432130 | -0.845541 | 3.807303e-59 | -8.615850e-47 |
Msa0333970 | Msa1434090 | -0.805537 | 1.272365e-49 | -8.615850e-47 |
Msa0333970 | Msa1436600 | -0.829101 | 6.215014e-55 | -8.615850e-47 |
Msa0333970 | Msa1437330 | -0.811592 | 6.483252e-51 | -8.615850e-47 |
Msa0333970 | Msa1437730 | -0.829473 | 5.047334e-55 | -8.615850e-47 |
Msa0333970 | Msa1442790 | -0.818784 | 1.635800e-52 | -8.615850e-47 |
Msa0333970 | Msa1444120 | -0.824294 | 8.724097e-54 | -8.615850e-47 |
Msa0333970 | Msa1458810 | -0.810618 | 1.053951e-50 | -8.615850e-47 |
Msa0333970 | Msa1460750 | -0.817635 | 2.976403e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0333970 | MtrunA17_Chr2g0318441 | 96.024 | 327 | 13 | 0 | 1 | 327 | 1 | 327 | 0.0 | 640 |
Msa0333970 | MtrunA17_Chr6g0457251 | 31.928 | 166 | 110 | 2 | 144 | 306 | 206 | 371 | 6.22e-20 | 89.7 |
Msa0333970 | MtrunA17_Chr6g0472501 | 31.677 | 161 | 104 | 3 | 133 | 292 | 94 | 249 | 5.59e-13 | 68.6 |
Msa0333970 | MtrunA17_Chr2g0332941 | 29.452 | 146 | 96 | 3 | 151 | 290 | 103 | 247 | 2.62e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0333970 | AT1G25290.2 | 58.528 | 299 | 116 | 2 | 23 | 313 | 25 | 323 | 5.73e-122 | 354 |
Msa0333970 | AT1G25290.1 | 56.863 | 306 | 117 | 3 | 23 | 313 | 25 | 330 | 2.00e-118 | 345 |
Msa0333970 | AT5G38510.2 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.42e-17 | 81.3 |
Msa0333970 | AT5G38510.3 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.42e-17 | 81.3 |
Msa0333970 | AT5G38510.1 | 32.258 | 155 | 104 | 1 | 142 | 295 | 216 | 370 | 8.42e-17 | 81.3 |
Msa0333970 | AT1G77860.1 | 32.558 | 172 | 107 | 5 | 142 | 310 | 111 | 276 | 2.25e-15 | 76.3 |
Msa0333970 | AT1G77860.2 | 32.558 | 172 | 107 | 5 | 142 | 310 | 111 | 276 | 2.73e-15 | 76.3 |
Msa0333970 | AT1G63120.1 | 30.380 | 158 | 106 | 3 | 151 | 305 | 104 | 260 | 3.83e-13 | 69.7 |
Msa0333970 | AT5G07250.1 | 32.168 | 143 | 95 | 2 | 149 | 290 | 126 | 267 | 2.03e-12 | 67.8 |
Msa0333970 | AT2G29050.1 | 30.719 | 153 | 102 | 3 | 147 | 296 | 119 | 270 | 2.60e-12 | 67.4 |
Msa0333970 | AT1G52580.1 | 31.034 | 145 | 90 | 3 | 145 | 283 | 94 | 234 | 5.08e-12 | 66.2 |
Msa0333970 | AT1G12750.4 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.60e-12 | 65.5 |
Msa0333970 | AT1G12750.7 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.60e-12 | 65.5 |
Msa0333970 | AT1G12750.6 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.60e-12 | 65.5 |
Msa0333970 | AT1G12750.3 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.60e-12 | 65.5 |
Msa0333970 | AT1G12750.1 | 31.915 | 141 | 94 | 2 | 151 | 290 | 91 | 230 | 8.60e-12 | 65.5 |
Find 115 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCCACATTATAGTTCATTT+TGG | 0.165320 | 2_4:+52050576 | None:intergenic |
GTCCACTTCCTTCCATTAAA+TGG | 0.175610 | 2_4:+52053583 | None:intergenic |
ACATAAGTTAAAGGGGTTTC+AGG | 0.225941 | 2_4:+52050694 | None:intergenic |
GTATTTCTCATGCAGCTTAT+TGG | 0.251876 | 2_4:-52051940 | Msa0333970:intron |
TATTTCTCATGCAGCTTATT+GGG | 0.272605 | 2_4:-52051939 | Msa0333970:intron |
AGTGGGACCAACTGAATTTA+AGG | 0.276075 | 2_4:+52052840 | None:intergenic |
AAGTATGCAACATAAGTTAA+AGG | 0.285351 | 2_4:+52050685 | None:intergenic |
ATTGCTGCATCATGGCTTAT+TGG | 0.290926 | 2_4:-52050965 | Msa0333970:CDS |
GAAACATTTCATCGGCCTAT+TGG | 0.295999 | 2_4:-52050831 | Msa0333970:three_prime_UTR |
TGTTTAGATTGAAGGATAAA+TGG | 0.318157 | 2_4:-52053759 | Msa0333970:CDS |
CATCAACTGGCATTGACAAC+TGG | 0.321814 | 2_4:-52051912 | Msa0333970:CDS |
ACCATTCAAATATTCTCTTA+AGG | 0.329000 | 2_4:+52050728 | None:intergenic |
TGCTCCCGTGTTTAGATTGA+AGG | 0.329417 | 2_4:-52053767 | Msa0333970:CDS |
GCATTTCCAGAGCTGGCTTC+AGG | 0.332234 | 2_4:+52053631 | None:intergenic |
GGGAGACACGGTGGCTGAAA+TGG | 0.347067 | 2_4:+52054637 | None:intergenic |
CAGGTGCAGCTATGAGTTAT+TGG | 0.355414 | 2_4:-52052675 | Msa0333970:CDS |
AGTATGCAACATAAGTTAAA+GGG | 0.361682 | 2_4:+52050686 | None:intergenic |
TTTCTCCAGATTCATTGTTT+CGG | 0.366404 | 2_4:+52050454 | None:intergenic |
CCCACTGTGGAGAGCTTTAG+TGG | 0.376144 | 2_4:-52052823 | Msa0333970:CDS |
AATTCAATCCTTTGAGTTGA+AGG | 0.377772 | 2_4:+52053725 | None:intergenic |
CCATTCAAATATTCTCTTAA+GGG | 0.378361 | 2_4:+52050729 | None:intergenic |
ACAAGTAATTGCCCTCAATA+TGG | 0.389857 | 2_4:-52052304 | Msa0333970:intron |
AACATCCGAAACAATGAATC+TGG | 0.390173 | 2_4:-52050459 | Msa0333970:three_prime_UTR |
CATGAATCCACATCTTTAGA+TGG | 0.393473 | 2_4:-52050929 | Msa0333970:CDS |
TGCAAATATTGGACACCTAA+TGG | 0.395874 | 2_4:-52052959 | Msa0333970:intron |
AGATTCATTGTTTCGGATGT+TGG | 0.399746 | 2_4:+52050461 | None:intergenic |
TCTACTTCGTTCCTGTCTCC+AGG | 0.414096 | 2_4:-52054595 | Msa0333970:intron |
CCCACCTGGATGCACCGCTC+CGG | 0.417368 | 2_4:-52050505 | Msa0333970:three_prime_UTR |
CTTATTGGGTTATCATCAAC+TGG | 0.417736 | 2_4:-52051925 | Msa0333970:CDS |
TCTTAAGGGAAGCTTACAAC+AGG | 0.420919 | 2_4:+52050743 | None:intergenic |
GAAATGGAGGGACGCGGCGG+TGG | 0.422096 | 2_4:+52054653 | None:intergenic |
TTTCAGTTAGGAGGCTTGAT+TGG | 0.428722 | 2_4:-52050992 | Msa0333970:intron |
ATCTTGAAGAGATTATATAT+TGG | 0.429421 | 2_4:+52050881 | None:intergenic |
CTGTCACCGGTTTGCAAGGT+GGG | 0.434972 | 2_4:-52054699 | Msa0333970:CDS |
TGTTTCTATTTCCATGGCTT+AGG | 0.437025 | 2_4:+52050848 | None:intergenic |
CCCACGACAAAAGCTTGCCT+TGG | 0.437216 | 2_4:+52053136 | None:intergenic |
CATAAGTTAAAGGGGTTTCA+GGG | 0.437219 | 2_4:+52050695 | None:intergenic |
TGAGTCGGCATTTCCAGAGC+TGG | 0.439376 | 2_4:+52053624 | None:intergenic |
CCACCCGGAGCGGTGCATCC+AGG | 0.442660 | 2_4:+52050501 | None:intergenic |
TTGCAAACCGGTGACAGAAA+TGG | 0.444522 | 2_4:+52054705 | None:intergenic |
GCTTGCGCTTGTAATCCAAT+AGG | 0.449056 | 2_4:+52050816 | None:intergenic |
CCACCTGGATGCACCGCTCC+GGG | 0.451604 | 2_4:-52050504 | Msa0333970:three_prime_UTR |
TTAAGGCACAAAGACCTTGT+AGG | 0.451701 | 2_4:-52052357 | Msa0333970:CDS |
ATGCCTGCAGTAGGTGCGTC+AGG | 0.452126 | 2_4:-52052643 | Msa0333970:CDS |
AACCGGTGACAGAAATGGCT+TGG | 0.460775 | 2_4:+52054710 | None:intergenic |
CCCTTAAGAGAATATTTGAA+TGG | 0.461614 | 2_4:-52050729 | Msa0333970:three_prime_UTR |
GGAAGACCTGAAGCCAGCTC+TGG | 0.461947 | 2_4:-52053637 | Msa0333970:CDS |
GCGGTGCATCCAGGTGGGAT+TGG | 0.462658 | 2_4:+52050510 | None:intergenic |
TATCTTCAATTGTCAAGTGA+TGG | 0.464338 | 2_4:-52053703 | Msa0333970:CDS |
GCCCAAGCCATTTCTGTCAC+CGG | 0.466220 | 2_4:-52054712 | Msa0333970:CDS |
ATGAAATGTTTCTATTTCCA+TGG | 0.474316 | 2_4:+52050842 | None:intergenic |
CCACGACAAAAGCTTGCCTT+GGG | 0.477575 | 2_4:+52053137 | None:intergenic |
GGTTTAGGTTGGATCGGTTG+CGG | 0.482114 | 2_4:-52052388 | Msa0333970:intron |
ATCAACTGGCATTGACAACT+GGG | 0.484122 | 2_4:-52051911 | Msa0333970:CDS |
ATCTTCAATTGTCAAGTGAT+GGG | 0.485198 | 2_4:-52053702 | Msa0333970:CDS |
ACCGGTGACAGAAATGGCTT+GGG | 0.501021 | 2_4:+52054711 | None:intergenic |
CAGTTAGGAGGCTTGATTGG+TGG | 0.501779 | 2_4:-52050989 | Msa0333970:CDS |
TGTTACTCCTTAAATTCAGT+TGG | 0.501810 | 2_4:-52052847 | Msa0333970:CDS |
TAAGGACCCACCTTGCAAAC+CGG | 0.514465 | 2_4:+52054693 | None:intergenic |
GTAGAAAGTGAAGGCGGAGA+CGG | 0.519386 | 2_4:+52054613 | None:intergenic |
ATGAGACACTTACCATATTG+AGG | 0.528872 | 2_4:+52052292 | None:intergenic |
ATCCATTTAATGGAAGGAAG+TGG | 0.533831 | 2_4:-52053585 | Msa0333970:CDS |
GGCGGAGACGGTGGGAGACA+CGG | 0.537970 | 2_4:+52054625 | None:intergenic |
TCATTGACAAAGGACAACTT+TGG | 0.538888 | 2_4:-52053008 | Msa0333970:CDS |
ATTTCTGTCACCGGTTTGCA+AGG | 0.538917 | 2_4:-52054703 | Msa0333970:CDS |
GTGGATTCATGCTTCCATGC+AGG | 0.542563 | 2_4:+52050941 | None:intergenic |
GAAAGTGAAGGCGGAGACGG+TGG | 0.544225 | 2_4:+52054616 | None:intergenic |
TTGGTGGAATTGCTGCATCA+TGG | 0.545395 | 2_4:-52050973 | Msa0333970:CDS |
GCTCCTGACGCACCTACTGC+AGG | 0.547227 | 2_4:+52052640 | None:intergenic |
TGTAATGGTTTAGGTTGGAT+CGG | 0.547688 | 2_4:-52052394 | Msa0333970:intron |
GCAATGATATCAAGTGGGTA+AGG | 0.550443 | 2_4:+52054675 | None:intergenic |
TAAATTGCAAGATATCTTCG+AGG | 0.552516 | 2_4:+52052799 | None:intergenic |
AACTGGAGAAGGGAAAGAAA+TGG | 0.555191 | 2_4:-52054739 | Msa0333970:exon |
CACAAAGACCTTGTAGGAGG+TGG | 0.557075 | 2_4:-52052351 | Msa0333970:CDS |
TCTTCTTCCATCTAAAGATG+TGG | 0.558989 | 2_4:+52050922 | None:intergenic |
TGAGACACTTACCATATTGA+GGG | 0.563701 | 2_4:+52052293 | None:intergenic |
CCCGGAGCGGTGCATCCAGG+TGG | 0.563975 | 2_4:+52050504 | None:intergenic |
TTAAGAGAATATTTGAATGG+TGG | 0.565446 | 2_4:-52050726 | Msa0333970:three_prime_UTR |
CCTGGATGCACCGCTCCGGG+TGG | 0.566387 | 2_4:-52050501 | Msa0333970:three_prime_UTR |
CAAAGATGCCTTCAACTCAA+AGG | 0.568006 | 2_4:-52053733 | Msa0333970:CDS |
CTCACAAAACATTGGCAGCA+AGG | 0.571689 | 2_4:+52053551 | None:intergenic |
AGACACGGTGGCTGAAATGG+AGG | 0.574356 | 2_4:+52054640 | None:intergenic |
CTGGATGCACCGCTCCGGGT+GGG | 0.583511 | 2_4:-52050500 | Msa0333970:three_prime_UTR |
TCTGTCACCGGTTTGCAAGG+TGG | 0.583568 | 2_4:-52054700 | Msa0333970:CDS |
CCACTAAAGCTCTCCACAGT+GGG | 0.584557 | 2_4:+52052823 | None:intergenic |
TGGAAATAGAAACATTTCAT+CGG | 0.586800 | 2_4:-52050839 | Msa0333970:exon |
GTGGCTGAAATGGAGGGACG+CGG | 0.589774 | 2_4:+52054647 | None:intergenic |
GCGGTTACTTGCAATTGAAG+AGG | 0.591639 | 2_4:+52052771 | None:intergenic |
GTTGCGCAACTTGCAACCCA+AGG | 0.593062 | 2_4:-52053153 | Msa0333970:CDS |
GACACGGTGGCTGAAATGGA+GGG | 0.603040 | 2_4:+52054641 | None:intergenic |
TTATCCTTCAATCTAAACAC+GGG | 0.608819 | 2_4:+52053763 | None:intergenic |
TGCTCATACTCACAAAACAT+TGG | 0.609078 | 2_4:+52053543 | None:intergenic |
CATGGCTTATTGGACCTGCA+TGG | 0.609641 | 2_4:-52050955 | Msa0333970:CDS |
GTATGCAACATAAGTTAAAG+GGG | 0.609786 | 2_4:+52050687 | None:intergenic |
TTACGAGAGGACCTAAGCCA+TGG | 0.618911 | 2_4:-52050859 | Msa0333970:CDS |
CCGGAGCGGTGCATCCAGGT+GGG | 0.620667 | 2_4:+52050505 | None:intergenic |
GCGGTGGCAATGATATCAAG+TGG | 0.623394 | 2_4:+52054669 | None:intergenic |
ACCCAAAATGAACTATAATG+TGG | 0.625351 | 2_4:-52050578 | Msa0333970:three_prime_UTR |
AATGATGTTGAATTCCCACC+CGG | 0.626961 | 2_4:+52050486 | None:intergenic |
AGGCACAAAGACCTTGTAGG+AGG | 0.629028 | 2_4:-52052354 | Msa0333970:CDS |
GTAAACAGTCTCATTGACAA+AGG | 0.638755 | 2_4:-52053018 | Msa0333970:CDS |
GCTGAAATGGAGGGACGCGG+CGG | 0.649712 | 2_4:+52054650 | None:intergenic |
TTTATCCTTCAATCTAAACA+CGG | 0.650319 | 2_4:+52053762 | None:intergenic |
CTTAAGGGAAGCTTACAACA+GGG | 0.652533 | 2_4:+52050744 | None:intergenic |
AAAGTGAAGGCGGAGACGGT+GGG | 0.654962 | 2_4:+52054617 | None:intergenic |
CGGTGGCAATGATATCAAGT+GGG | 0.662467 | 2_4:+52054670 | None:intergenic |
AACGAAGTAGAAAGTGAAGG+CGG | 0.666662 | 2_4:+52054607 | None:intergenic |
AGGAACGAAGTAGAAAGTGA+AGG | 0.668444 | 2_4:+52054604 | None:intergenic |
TGTTGAATTCCCACCCGGAG+CGG | 0.669454 | 2_4:+52050491 | None:intergenic |
AATCTCTTCAAGATTACGAG+AGG | 0.669871 | 2_4:-52050872 | Msa0333970:CDS |
TTCTGCAAAATGCCTGCAGT+AGG | 0.702369 | 2_4:-52052652 | Msa0333970:CDS |
AAATTCAGTTGGTCCCACTG+TGG | 0.708926 | 2_4:-52052836 | Msa0333970:CDS |
GGAGACGGTGGGAGACACGG+TGG | 0.711069 | 2_4:+52054628 | None:intergenic |
ACCACTAAAGCTCTCCACAG+TGG | 0.711367 | 2_4:+52052822 | None:intergenic |
TCAACTGGCATTGACAACTG+GGG | 0.722807 | 2_4:-52051910 | Msa0333970:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATTTTTTTTTAAAA+TGG | + | chr2_4:52052704-52052723 | None:intergenic | 0.0% |
!!! | TATATTTTTTCTTCTTATTT+AGG | - | chr2_4:52053118-52053137 | Msa0333970:intron | 10.0% |
!! | TAAGAAAATGAAAAATTTAA+GGG | + | chr2_4:52053386-52053405 | None:intergenic | 10.0% |
!!! | TTAATGTTGATGATTAAAAT+GGG | - | chr2_4:52050827-52050846 | Msa0333970:three_prime_UTR | 15.0% |
!!! | AAAGTAAAATTGTTTTTGTA+TGG | - | chr2_4:52050910-52050929 | Msa0333970:CDS | 15.0% |
!!! | AAGTAAAATTGTTTTTGTAT+GGG | - | chr2_4:52050911-52050930 | Msa0333970:CDS | 15.0% |
!!! | ATTATTGATTAACAAATCAA+AGG | + | chr2_4:52051855-52051874 | None:intergenic | 15.0% |
!!! | ATTATGGAATTAGAATATTT+TGG | + | chr2_4:52052521-52052540 | None:intergenic | 15.0% |
!!! | TTTTTTTTTAAAATGGTTCA+GGG | + | chr2_4:52052697-52052716 | None:intergenic | 15.0% |
!!! | ATTTTTTTTTAAAATGGTTC+AGG | + | chr2_4:52052698-52052717 | None:intergenic | 15.0% |
!! | CTAAGAAAATGAAAAATTTA+AGG | + | chr2_4:52053387-52053406 | None:intergenic | 15.0% |
!!! | TTTATTCACTTTTTAAAATG+TGG | - | chr2_4:52053466-52053485 | Msa0333970:intron | 15.0% |
!!! | AAATTGCAAAAATTTTGACT+TGG | - | chr2_4:52050683-52050702 | Msa0333970:three_prime_UTR | 20.0% |
!!! | TAGTTATATTTTCCTCATTT+AGG | - | chr2_4:52050731-52050750 | Msa0333970:three_prime_UTR | 20.0% |
!!! | GTTAATGTTGATGATTAAAA+TGG | - | chr2_4:52050826-52050845 | Msa0333970:three_prime_UTR | 20.0% |
!! | ATGATACAATCACTTAATTA+AGG | + | chr2_4:52051087-52051106 | None:intergenic | 20.0% |
!!! | TTTTTATTAGTTCTCTATGA+TGG | + | chr2_4:52051196-52051215 | None:intergenic | 20.0% |
!!! | AAATACTTGTTAGATTGTTT+GGG | + | chr2_4:52051314-52051333 | None:intergenic | 20.0% |
!!! | TAAATACTTGTTAGATTGTT+TGG | + | chr2_4:52051315-52051334 | None:intergenic | 20.0% |
!!! | TTTTAATACAAAACTAAACC+AGG | + | chr2_4:52052334-52052353 | None:intergenic | 20.0% |
!! | TATTGTAGGAATAATATAAG+CGG | + | chr2_4:52052478-52052497 | None:intergenic | 20.0% |
!!! | TTTTTTTTAAAATGGTTCAG+GGG | + | chr2_4:52052696-52052715 | None:intergenic | 20.0% |
!! | TTATTTAGGAAATGTTTGTT+CGG | - | chr2_4:52053132-52053151 | Msa0333970:CDS | 20.0% |
!!! | AATAAATGAGGGTATAATAA+TGG | + | chr2_4:52053715-52053734 | None:intergenic | 20.0% |
!!! | ATTAATTGTGTTGATTTTGA+TGG | + | chr2_4:52053810-52053829 | None:intergenic | 20.0% |
!! | CTGAAAAATGTATATGTTAA+TGG | + | chr2_4:52054221-52054240 | None:intergenic | 20.0% |
!!! | AACATATACATTTTTCAGTT+AGG | - | chr2_4:52054223-52054242 | Msa0333970:intron | 20.0% |
!! | ATCTTGAAGAGATTATATAT+TGG | + | chr2_4:52054349-52054368 | None:intergenic | 20.0% |
!!! | AAGAAGCCAATTTTTTTTTG+CGG | - | chr2_4:52050465-52050484 | Msa0333970:three_prime_UTR | 25.0% |
! | TTCTTTCTATAACCTAAATG+AGG | + | chr2_4:52050746-52050765 | None:intergenic | 25.0% |
! | ATAGAAAGAAACCATTGAAA+TGG | - | chr2_4:52050756-52050775 | Msa0333970:three_prime_UTR | 25.0% |
! | ACTTAAATACTCCATTTCAA+TGG | + | chr2_4:52050770-52050789 | None:intergenic | 25.0% |
!! | TTGATGATTAAAATGGGAAT+AGG | - | chr2_4:52050833-52050852 | Msa0333970:three_prime_UTR | 25.0% |
! | AATTAAGGATATGTTTGGAT+TGG | + | chr2_4:52051072-52051091 | None:intergenic | 25.0% |
! | CACTTAATTAAGGATATGTT+TGG | + | chr2_4:52051077-52051096 | None:intergenic | 25.0% |
! | TTTATCCTTCAATCTAAACA+CGG | + | chr2_4:52051468-52051487 | None:intergenic | 25.0% |
! | TGTTTAGATTGAAGGATAAA+TGG | - | chr2_4:52051468-52051487 | Msa0333970:intron | 25.0% |
!!! | GCTAGTTTCTCTTTTTTTAA+TGG | - | chr2_4:52051566-52051585 | Msa0333970:intron | 25.0% |
!!! | AGTTTCTCTTTTTTTAATGG+AGG | - | chr2_4:52051569-52051588 | Msa0333970:intron | 25.0% |
! | TCCAGAAAAAATCCATTTAA+TGG | - | chr2_4:52051632-52051651 | Msa0333970:intron | 25.0% |
!!! | TCCATTAAATGGATTTTTTC+TGG | + | chr2_4:52051636-52051655 | None:intergenic | 25.0% |
! | GAAAAAATCCATTTAATGGA+AGG | - | chr2_4:52051636-52051655 | Msa0333970:intron | 25.0% |
! | AAACTTAATACACCAATCAA+GGG | + | chr2_4:52051714-52051733 | None:intergenic | 25.0% |
! | TAAACTTAATACACCAATCA+AGG | + | chr2_4:52051715-52051734 | None:intergenic | 25.0% |
! | AGTGAAAAGAAAGAAAAACA+AGG | - | chr2_4:52051778-52051797 | Msa0333970:intron | 25.0% |
! | GTGAAAAGAAAGAAAAACAA+GGG | - | chr2_4:52051779-52051798 | Msa0333970:intron | 25.0% |
! | CAGAAAAATGAAGAGAAAAA+TGG | + | chr2_4:52051950-52051969 | None:intergenic | 25.0% |
!! | GTATCTAAAATTGTGAAAAG+AGG | + | chr2_4:52051998-52052017 | None:intergenic | 25.0% |
! | TTAATTCAAATCCTACCATT+AGG | + | chr2_4:52052286-52052305 | None:intergenic | 25.0% |
!!! | ATTAGAATATTTTGGAGGTA+AGG | + | chr2_4:52052513-52052532 | None:intergenic | 25.0% |
!!! | ATGGAATTAGAATATTTTGG+AGG | + | chr2_4:52052518-52052537 | None:intergenic | 25.0% |
!! | TCCATAATTTCTAGAAAATC+AGG | - | chr2_4:52052533-52052552 | Msa0333970:intron | 25.0% |
!!! | ACCTGATTTTCTAGAAATTA+TGG | + | chr2_4:52052537-52052556 | None:intergenic | 25.0% |
! | GACTTGTATCAAGTAAAATA+AGG | + | chr2_4:52052674-52052693 | None:intergenic | 25.0% |
!! | AGTTTTCTATCTTCTCTATA+TGG | + | chr2_4:52052769-52052788 | None:intergenic | 25.0% |
! | AAAACAGTGAAGAAAGATAA+AGG | + | chr2_4:52052803-52052822 | None:intergenic | 25.0% |
! | TAAGTTGTTTATCTTAGTTG+AGG | + | chr2_4:52053542-52053561 | None:intergenic | 25.0% |
! | GGATGAAATTCAATAAATGA+GGG | + | chr2_4:52053726-52053745 | None:intergenic | 25.0% |
! | TGGATGAAATTCAATAAATG+AGG | + | chr2_4:52053727-52053746 | None:intergenic | 25.0% |
! | TCCACTAACTACAATTAATA+AGG | - | chr2_4:52053757-52053776 | Msa0333970:CDS | 25.0% |
! | CCACTAACTACAATTAATAA+GGG | - | chr2_4:52053758-52053777 | Msa0333970:CDS | 25.0% |
! | CTCTAAATAATAGTCGTTTA+AGG | + | chr2_4:52053858-52053877 | None:intergenic | 25.0% |
! | TAAACACTTATGAAACTGTT+TGG | + | chr2_4:52053990-52054009 | None:intergenic | 25.0% |
!!! | AAAATGGATAGTCTTATACA+CGG | + | chr2_4:52054107-52054126 | None:intergenic | 25.0% |
!!! | ATCCATTTTGTTATGTATGT+AGG | - | chr2_4:52054118-52054137 | Msa0333970:intron | 25.0% |
!!! | ATATACATTTTTCAGTTAGG+AGG | - | chr2_4:52054226-52054245 | Msa0333970:intron | 25.0% |
!! | ATGAAATGTTTCTATTTCCA+TGG | + | chr2_4:52054388-52054407 | None:intergenic | 25.0% |
! | TGGAAATAGAAACATTTCAT+CGG | - | chr2_4:52054388-52054407 | Msa0333970:intron | 25.0% |
! | CCATTCAAATATTCTCTTAA+GGG | + | chr2_4:52054501-52054520 | None:intergenic | 25.0% |
! | ACCATTCAAATATTCTCTTA+AGG | + | chr2_4:52054502-52054521 | None:intergenic | 25.0% |
! | TTAAGAGAATATTTGAATGG+TGG | - | chr2_4:52054501-52054520 | Msa0333970:intron | 25.0% |
! | AGTATGCAACATAAGTTAAA+GGG | + | chr2_4:52054544-52054563 | None:intergenic | 25.0% |
! | AAGTATGCAACATAAGTTAA+AGG | + | chr2_4:52054545-52054564 | None:intergenic | 25.0% |
TTATCTACTGACATAAGCAA+TGG | + | chr2_4:52051038-52051057 | None:intergenic | 30.0% | |
CTAACAAGTATTTATGACAG+TGG | - | chr2_4:52051321-52051340 | Msa0333970:intron | 30.0% | |
TTATCCTTCAATCTAAACAC+GGG | + | chr2_4:52051467-52051486 | None:intergenic | 30.0% | |
!! | AATTCAATCCTTTGAGTTGA+AGG | + | chr2_4:52051505-52051524 | None:intergenic | 30.0% |
TATCTTCAATTGTCAAGTGA+TGG | - | chr2_4:52051524-52051543 | Msa0333970:intron | 30.0% | |
ATCTTCAATTGTCAAGTGAT+GGG | - | chr2_4:52051525-52051544 | Msa0333970:intron | 30.0% | |
GTTTATGACTTCCTAGAATT+TGG | - | chr2_4:52051730-52051749 | Msa0333970:intron | 30.0% | |
CAGTACAAACTATTCAAATC+CGG | + | chr2_4:52051927-52051946 | None:intergenic | 30.0% | |
! | TCACAATTTTAGATACCTCT+TGG | - | chr2_4:52052002-52052021 | Msa0333970:intron | 30.0% |
AATAGATATGATCTGTGTTG+TGG | - | chr2_4:52052150-52052169 | Msa0333970:intron | 30.0% | |
! | TCTTTTCTGCATGCAAATAT+TGG | - | chr2_4:52052257-52052276 | Msa0333970:intron | 30.0% |
TGTTACTCCTTAAATTCAGT+TGG | - | chr2_4:52052380-52052399 | Msa0333970:CDS | 30.0% | |
TAAATTGCAAGATATCTTCG+AGG | + | chr2_4:52052431-52052450 | None:intergenic | 30.0% | |
TCTATATGGAAAACCAAGAT+AGG | + | chr2_4:52052755-52052774 | None:intergenic | 30.0% | |
! | GTTTTTCTAATGAGCTGTAA+TGG | - | chr2_4:52052818-52052837 | Msa0333970:CDS | 30.0% |
TATGGATGTGACTTATAGAT+GGG | - | chr2_4:52053225-52053244 | Msa0333970:intron | 30.0% | |
TATTTCTCATGCAGCTTATT+GGG | - | chr2_4:52053288-52053307 | Msa0333970:intron | 30.0% | |
AAGTGACAATTATTGTGAGA+CGG | + | chr2_4:52053660-52053679 | None:intergenic | 30.0% | |
CCCTTATTAATTGTAGTTAG+TGG | + | chr2_4:52053761-52053780 | None:intergenic | 30.0% | |
GACTATTATTTAGAGACAGA+GGG | - | chr2_4:52053863-52053882 | Msa0333970:intron | 30.0% | |
TCAAAAAAGTCAATCCAAAC+AGG | - | chr2_4:52054024-52054043 | Msa0333970:intron | 30.0% | |
ATACACGGAATACAAAATTG+AGG | + | chr2_4:52054092-52054111 | None:intergenic | 30.0% | |
TGCCTACATACATAACAAAA+TGG | + | chr2_4:52054123-52054142 | None:intergenic | 30.0% | |
CCCTTAAGAGAATATTTGAA+TGG | - | chr2_4:52054498-52054517 | Msa0333970:intron | 30.0% | |
GTATGCAACATAAGTTAAAG+GGG | + | chr2_4:52054543-52054562 | None:intergenic | 30.0% | |
!! | TTGCATACTTTTGTTGTACA+TGG | - | chr2_4:52054555-52054574 | Msa0333970:intron | 30.0% |
!! | TGCATACTTTTGTTGTACAT+GGG | - | chr2_4:52054556-52054575 | Msa0333970:intron | 30.0% |
AAAAATCATCCATACAAGCA+AGG | + | chr2_4:52054608-52054627 | None:intergenic | 30.0% | |
!!! | TGCTTGTATGGATGATTTTT+TGG | - | chr2_4:52054608-52054627 | Msa0333970:CDS | 30.0% |
!!! | GCTTGTATGGATGATTTTTT+GGG | - | chr2_4:52054609-52054628 | Msa0333970:CDS | 30.0% |
!!! | ATAGTTCATTTTGGGTTGTA+GGG | + | chr2_4:52054645-52054664 | None:intergenic | 30.0% |
!!! | TATAGTTCATTTTGGGTTGT+AGG | + | chr2_4:52054646-52054665 | None:intergenic | 30.0% |
ACCCAAAATGAACTATAATG+TGG | - | chr2_4:52054649-52054668 | Msa0333970:CDS | 30.0% | |
! | GCCACATTATAGTTCATTTT+GGG | + | chr2_4:52054653-52054672 | None:intergenic | 30.0% |
! | TGCCACATTATAGTTCATTT+TGG | + | chr2_4:52054654-52054673 | None:intergenic | 30.0% |
TTTCTCCAGATTCATTGTTT+CGG | + | chr2_4:52054776-52054795 | None:intergenic | 30.0% | |
CCAGTTCCGCAAAAAAAAAT+TGG | + | chr2_4:52050474-52050493 | None:intergenic | 35.0% | |
!!! | CCAATTTTTTTTTGCGGAAC+TGG | - | chr2_4:52050471-52050490 | Msa0333970:three_prime_UTR | 35.0% |
GAGTGAATAAAAAGAAGACC+TGG | + | chr2_4:52050653-52050672 | None:intergenic | 35.0% | |
AATAGGAAGTAGCTCATGTT+TGG | - | chr2_4:52050850-52050869 | Msa0333970:exon | 35.0% | |
!! | CTTGTTTTCACAAGCTATCT+TGG | - | chr2_4:52050940-52050959 | Msa0333970:CDS | 35.0% |
!! | TGTTTGGATTGGCTTATTTG+AGG | + | chr2_4:52051061-52051080 | None:intergenic | 35.0% |
AAGAAAGAAGAGACACAAAC+GGG | + | chr2_4:52051377-52051396 | None:intergenic | 35.0% | |
GAAGAAAGAAGAGACACAAA+CGG | + | chr2_4:52051378-52051397 | None:intergenic | 35.0% | |
!! | CTCTTCTTTCTTCTGAAATC+TGG | - | chr2_4:52051385-52051404 | Msa0333970:intron | 35.0% |
! | TTTTCTGGACATCTTTGAGT+CGG | + | chr2_4:52051621-52051640 | None:intergenic | 35.0% |
ATCCATTTAATGGAAGGAAG+TGG | - | chr2_4:52051642-52051661 | Msa0333970:intron | 35.0% | |
TGCTCATACTCACAAAACAT+TGG | + | chr2_4:52051687-52051706 | None:intergenic | 35.0% | |
TATGAGCATATTCCCTTGAT+TGG | - | chr2_4:52051699-52051718 | Msa0333970:intron | 35.0% | |
AGAAAGCAAAGTGAGCATTA+TGG | + | chr2_4:52051878-52051897 | None:intergenic | 35.0% | |
GTTGTGTTGTGTATGTTACT+AGG | - | chr2_4:52052187-52052206 | Msa0333970:intron | 35.0% | |
GTAAACAGTCTCATTGACAA+AGG | - | chr2_4:52052209-52052228 | Msa0333970:intron | 35.0% | |
TCATTGACAAAGGACAACTT+TGG | - | chr2_4:52052219-52052238 | Msa0333970:intron | 35.0% | |
TGCAAATATTGGACACCTAA+TGG | - | chr2_4:52052268-52052287 | Msa0333970:intron | 35.0% | |
AATATTGGACACCTAATGGT+AGG | - | chr2_4:52052272-52052291 | Msa0333970:intron | 35.0% | |
! | GGAATTTCATTGGCTATTGT+AGG | + | chr2_4:52052492-52052511 | None:intergenic | 35.0% |
TTGGAGGTAAGGAATTTCAT+TGG | + | chr2_4:52052502-52052521 | None:intergenic | 35.0% | |
AAGATAGAAAACTGAGATGC+TGG | - | chr2_4:52052776-52052795 | Msa0333970:intron | 35.0% | |
CTAATGAGCTGTAATGGTTT+AGG | - | chr2_4:52052824-52052843 | Msa0333970:CDS | 35.0% | |
!! | TGTAATGGTTTAGGTTGGAT+CGG | - | chr2_4:52052833-52052852 | Msa0333970:CDS | 35.0% |
ACAAGTAATTGCCCTCAATA+TGG | - | chr2_4:52052923-52052942 | Msa0333970:intron | 35.0% | |
TGAGACACTTACCATATTGA+GGG | + | chr2_4:52052937-52052956 | None:intergenic | 35.0% | |
ATGAGACACTTACCATATTG+AGG | + | chr2_4:52052938-52052957 | None:intergenic | 35.0% | |
!!! | TGTTAGTTTTGCAACTTCAC+TGG | - | chr2_4:52052984-52053003 | Msa0333970:CDS | 35.0% |
GTAAAATTTCTGTTCCACTG+TGG | + | chr2_4:52053054-52053073 | None:intergenic | 35.0% | |
TAACTTAGACCATCACTCTA+TGG | - | chr2_4:52053207-52053226 | Msa0333970:intron | 35.0% | |
CTATGGATGTGACTTATAGA+TGG | - | chr2_4:52053224-52053243 | Msa0333970:intron | 35.0% | |
TTTCCTTGTCTGTGTTCTAA+CGG | - | chr2_4:52053259-52053278 | Msa0333970:intron | 35.0% | |
GTATTTCTCATGCAGCTTAT+TGG | - | chr2_4:52053287-52053306 | Msa0333970:intron | 35.0% | |
CTTATTGGGTTATCATCAAC+TGG | - | chr2_4:52053302-52053321 | Msa0333970:intron | 35.0% | |
AAGGGCAGTAAAAAAATCCA+TGG | + | chr2_4:52053368-52053387 | None:intergenic | 35.0% | |
CCTTTGTTCAGTAAAAGTTG+CGG | - | chr2_4:52053409-52053428 | Msa0333970:intron | 35.0% | |
CTTTGTTCAGTAAAAGTTGC+GGG | - | chr2_4:52053410-52053429 | Msa0333970:intron | 35.0% | |
AGTTAGTGGAGTAGTTAAGT+TGG | + | chr2_4:52053747-52053766 | None:intergenic | 35.0% | |
AGGTTTATGCACGGTTATTA+AGG | + | chr2_4:52053838-52053857 | None:intergenic | 35.0% | |
! | AGTCGTTTAAGGTTTATGCA+CGG | + | chr2_4:52053847-52053866 | None:intergenic | 35.0% |
CGACTATTATTTAGAGACAG+AGG | - | chr2_4:52053862-52053881 | Msa0333970:intron | 35.0% | |
TTTCTATCATGATGAGCTTG+TGG | - | chr2_4:52053911-52053930 | Msa0333970:intron | 35.0% | |
AACAAGCTGATGACAACTTA+TGG | - | chr2_4:52053935-52053954 | Msa0333970:intron | 35.0% | |
GAAACTGTTTGGAAGACTTA+TGG | + | chr2_4:52053979-52053998 | None:intergenic | 35.0% | |
!! | ACATAGTTTTTAGGCCTGTT+TGG | + | chr2_4:52054041-52054060 | None:intergenic | 35.0% |
AAACAGGCCTAAAAACTATG+TGG | - | chr2_4:52054040-52054059 | Msa0333970:intron | 35.0% | |
! | TCCATGTCCACATAGTTTTT+AGG | + | chr2_4:52054050-52054069 | None:intergenic | 35.0% |
! | TTTGTTATGTATGTAGGCAC+TGG | - | chr2_4:52054124-52054143 | Msa0333970:intron | 35.0% |
AAACTATGCACAGATTACAC+TGG | + | chr2_4:52054178-52054197 | None:intergenic | 35.0% | |
CATGAATCCACATCTTTAGA+TGG | - | chr2_4:52054298-52054317 | Msa0333970:intron | 35.0% | |
TCTTCTTCCATCTAAAGATG+TGG | + | chr2_4:52054308-52054327 | None:intergenic | 35.0% | |
AATCTCTTCAAGATTACGAG+AGG | - | chr2_4:52054355-52054374 | Msa0333970:intron | 35.0% | |
! | TGTTTCTATTTCCATGGCTT+AGG | + | chr2_4:52054382-52054401 | None:intergenic | 35.0% |
CATAAGTTAAAGGGGTTTCA+GGG | + | chr2_4:52054535-52054554 | None:intergenic | 35.0% | |
ACATAAGTTAAAGGGGTTTC+AGG | + | chr2_4:52054536-52054555 | None:intergenic | 35.0% | |
!! | GCATACTTTTGTTGTACATG+GGG | - | chr2_4:52054557-52054576 | Msa0333970:intron | 35.0% |
!! | GTTTGTTTTCCTTGCTTGTA+TGG | - | chr2_4:52054596-52054615 | Msa0333970:CDS | 35.0% |
!!! | ATGGATGATTTTTTGGGTCT+AGG | - | chr2_4:52054615-52054634 | Msa0333970:CDS | 35.0% |
AGATTCATTGTTTCGGATGT+TGG | + | chr2_4:52054769-52054788 | None:intergenic | 35.0% | |
AACATCCGAAACAATGAATC+TGG | - | chr2_4:52054768-52054787 | Msa0333970:five_prime_UTR | 35.0% | |
!!! | TTTTTTTGCGGAACTGGAGA+AGG | - | chr2_4:52050477-52050496 | Msa0333970:three_prime_UTR | 40.0% |
!!! | TTTTTTGCGGAACTGGAGAA+GGG | - | chr2_4:52050478-52050497 | Msa0333970:three_prime_UTR | 40.0% |
AACTGGAGAAGGGAAAGAAA+TGG | - | chr2_4:52050488-52050507 | Msa0333970:three_prime_UTR | 40.0% | |
GCAATGATATCAAGTGGGTA+AGG | + | chr2_4:52050555-52050574 | None:intergenic | 40.0% | |
AACGAAGTAGAAAGTGAAGG+CGG | + | chr2_4:52050623-52050642 | None:intergenic | 40.0% | |
AGGAACGAAGTAGAAAGTGA+AGG | + | chr2_4:52050626-52050645 | None:intergenic | 40.0% | |
TAAAAAGAAGACCTGGAGAC+AGG | + | chr2_4:52050646-52050665 | None:intergenic | 40.0% | |
AGACTGTTTGAGAGAGCTTA+TGG | + | chr2_4:52051260-52051279 | None:intergenic | 40.0% | |
AGAAAGAAGAGACACAAACG+GGG | + | chr2_4:52051376-52051395 | None:intergenic | 40.0% | |
!! | CTTCTGAAATCTGGATGTTG+CGG | - | chr2_4:52051394-52051413 | Msa0333970:intron | 40.0% |
CAAAGATGCCTTCAACTCAA+AGG | - | chr2_4:52051494-52051513 | Msa0333970:intron | 40.0% | |
GTCCACTTCCTTCCATTAAA+TGG | + | chr2_4:52051647-52051666 | None:intergenic | 40.0% | |
! | CTTTAGAGGAGCCAAATTCT+AGG | + | chr2_4:52051744-52051763 | None:intergenic | 40.0% |
TTACACTCCACTCACTTTAG+AGG | + | chr2_4:52051758-52051777 | None:intergenic | 40.0% | |
AGTGGGACCAACTGAATTTA+AGG | + | chr2_4:52052390-52052409 | None:intergenic | 40.0% | |
TCAAACGTACTTGTCTCTCT+TGG | - | chr2_4:52052726-52052745 | Msa0333970:intron | 40.0% | |
TCTCTCTTGGATTCCTATCT+TGG | - | chr2_4:52052739-52052758 | Msa0333970:intron | 40.0% | |
TGAGCTGTAATGGTTTAGGT+TGG | - | chr2_4:52052828-52052847 | Msa0333970:CDS | 40.0% | |
TTAAGGCACAAAGACCTTGT+AGG | - | chr2_4:52052870-52052889 | Msa0333970:intron | 40.0% | |
!!! | CTTTTTTACCACCTCCTACA+AGG | + | chr2_4:52052887-52052906 | None:intergenic | 40.0% |
GCAGAATCAGAAGTAACACA+GGG | + | chr2_4:52052962-52052981 | None:intergenic | 40.0% | |
AGCAGAATCAGAAGTAACAC+AGG | + | chr2_4:52052963-52052982 | None:intergenic | 40.0% | |
!! | TTGTTCGGTAGAAGTGTTGT+TGG | - | chr2_4:52053147-52053166 | Msa0333970:CDS | 40.0% |
!! | AAGTGTTGTTGGTTCATGCA+AGG | - | chr2_4:52053158-52053177 | Msa0333970:CDS | 40.0% |
!! | AGTGTTGTTGGTTCATGCAA+GGG | - | chr2_4:52053159-52053178 | Msa0333970:CDS | 40.0% |
AAGTCACATCCATAGAGTGA+TGG | + | chr2_4:52053219-52053238 | None:intergenic | 40.0% | |
!! | ATCAACTGGCATTGACAACT+GGG | - | chr2_4:52053316-52053335 | Msa0333970:intron | 40.0% |
! | CCGCAACTTTTACTGAACAA+AGG | + | chr2_4:52053412-52053431 | None:intergenic | 40.0% |
!!! | TTTTAAAATGTGGCGTGACC+TGG | - | chr2_4:52053476-52053495 | Msa0333970:intron | 40.0% |
! | CTCGAATTTAGAGTCATTCC+AGG | + | chr2_4:52053497-52053516 | None:intergenic | 40.0% |
GACAATTATTGTGAGACGGA+GGG | + | chr2_4:52053656-52053675 | None:intergenic | 40.0% | |
TGACAATTATTGTGAGACGG+AGG | + | chr2_4:52053657-52053676 | None:intergenic | 40.0% | |
GCCTAAAAACTATGTGGACA+TGG | - | chr2_4:52054046-52054065 | Msa0333970:intron | 40.0% | |
TTTCAGTTAGGAGGCTTGAT+TGG | - | chr2_4:52054235-52054254 | Msa0333970:intron | 40.0% | |
ATTGCTGCATCATGGCTTAT+TGG | - | chr2_4:52054262-52054281 | Msa0333970:intron | 40.0% | |
GAAACATTTCATCGGCCTAT+TGG | - | chr2_4:52054396-52054415 | Msa0333970:intron | 40.0% | |
CTTAAGGGAAGCTTACAACA+GGG | + | chr2_4:52054486-52054505 | None:intergenic | 40.0% | |
TCTTAAGGGAAGCTTACAAC+AGG | + | chr2_4:52054487-52054506 | None:intergenic | 40.0% | |
!! | GTTTTTCAGAATGGTAGCGA+AGG | + | chr2_4:52054698-52054717 | None:intergenic | 40.0% |
!!! | GTGGGATTGGTTTTTCAGAA+TGG | + | chr2_4:52054707-52054726 | None:intergenic | 40.0% |
AATGATGTTGAATTCCCACC+CGG | + | chr2_4:52054744-52054763 | None:intergenic | 40.0% | |
TTGCAAACCGGTGACAGAAA+TGG | + | chr2_4:52050525-52050544 | None:intergenic | 45.0% | |
!! | ATTTCTGTCACCGGTTTGCA+AGG | - | chr2_4:52050524-52050543 | Msa0333970:three_prime_UTR | 45.0% |
CGGTGGCAATGATATCAAGT+GGG | + | chr2_4:52050560-52050579 | None:intergenic | 45.0% | |
CAAGAGAGACATGTGAGTCA+AGG | + | chr2_4:52051427-52051446 | None:intergenic | 45.0% | |
TGCTCCCGTGTTTAGATTGA+AGG | - | chr2_4:52051460-52051479 | Msa0333970:intron | 45.0% | |
CTCACAAAACATTGGCAGCA+AGG | + | chr2_4:52051679-52051698 | None:intergenic | 45.0% | |
!! | TTTGGCTCCTCTAAAGTGAG+TGG | - | chr2_4:52051748-52051767 | Msa0333970:intron | 45.0% |
CAATAAGCACTCTCACCAAG+AGG | + | chr2_4:52052020-52052039 | None:intergenic | 45.0% | |
CAGGCATGACAGAACAAACT+TGG | + | chr2_4:52052315-52052334 | None:intergenic | 45.0% | |
! | CAAGTTTGTTCTGTCATGCC+TGG | - | chr2_4:52052313-52052332 | Msa0333970:CDS | 45.0% |
AAATTCAGTTGGTCCCACTG+TGG | - | chr2_4:52052391-52052410 | Msa0333970:intron | 45.0% | |
GCGGTTACTTGCAATTGAAG+AGG | + | chr2_4:52052459-52052478 | None:intergenic | 45.0% | |
CAGGTGCAGCTATGAGTTAT+TGG | - | chr2_4:52052552-52052571 | Msa0333970:intron | 45.0% | |
TTCTGCAAAATGCCTGCAGT+AGG | - | chr2_4:52052575-52052594 | Msa0333970:intron | 45.0% | |
!!! | CGGTTGCGGTGTTTGTTTTA+AGG | - | chr2_4:52052853-52052872 | Msa0333970:CDS | 45.0% |
AGTTATCACGAGACAGTGTG+TGG | - | chr2_4:52053011-52053030 | Msa0333970:CDS | 45.0% | |
! | ATGCTTCTGATTAGCCACAG+TGG | - | chr2_4:52053037-52053056 | Msa0333970:intron | 45.0% |
GGTTCATGCAAGGGTTATGT+CGG | - | chr2_4:52053168-52053187 | Msa0333970:intron | 45.0% | |
GTTCATGCAAGGGTTATGTC+GGG | - | chr2_4:52053169-52053188 | Msa0333970:intron | 45.0% | |
!! | CATCAACTGGCATTGACAAC+TGG | - | chr2_4:52053315-52053334 | Msa0333970:intron | 45.0% |
!! | TCAACTGGCATTGACAACTG+GGG | - | chr2_4:52053317-52053336 | Msa0333970:intron | 45.0% |
AACTGGGGACATGTAAGTGT+AGG | - | chr2_4:52053332-52053351 | Msa0333970:intron | 45.0% | |
! | GTGTAGGAGTGTATCATCCA+TGG | - | chr2_4:52053348-52053367 | Msa0333970:intron | 45.0% |
TTGGTGGAATTGCTGCATCA+TGG | - | chr2_4:52054254-52054273 | Msa0333970:intron | 45.0% | |
GCTTGCGCTTGTAATCCAAT+AGG | + | chr2_4:52054414-52054433 | None:intergenic | 45.0% | |
TCTGAAAAACCAATCCCACC+TGG | - | chr2_4:52054708-52054727 | Msa0333970:CDS | 45.0% | |
ACCGGTGACAGAAATGGCTT+GGG | + | chr2_4:52050519-52050538 | None:intergenic | 50.0% | |
AACCGGTGACAGAAATGGCT+TGG | + | chr2_4:52050520-52050539 | None:intergenic | 50.0% | |
TAAGGACCCACCTTGCAAAC+CGG | + | chr2_4:52050537-52050556 | None:intergenic | 50.0% | |
GCGGTGGCAATGATATCAAG+TGG | + | chr2_4:52050561-52050580 | None:intergenic | 50.0% | |
GTAGAAAGTGAAGGCGGAGA+CGG | + | chr2_4:52050617-52050636 | None:intergenic | 50.0% | |
TCTACTTCGTTCCTGTCTCC+AGG | - | chr2_4:52050632-52050651 | Msa0333970:three_prime_UTR | 50.0% | |
GTTGCTCGCTTCAAATGAGC+CGG | - | chr2_4:52051905-52051924 | Msa0333970:intron | 50.0% | |
CCACGACAAAAGCTTGCCTT+GGG | + | chr2_4:52052093-52052112 | None:intergenic | 50.0% | |
! | CCAAGGCAAGCTTTTGTCGT+GGG | - | chr2_4:52052091-52052110 | Msa0333970:intron | 50.0% |
! | CAAGGCAAGCTTTTGTCGTG+GGG | - | chr2_4:52052092-52052111 | Msa0333970:intron | 50.0% |
CCACTAAAGCTCTCCACAGT+GGG | + | chr2_4:52052407-52052426 | None:intergenic | 50.0% | |
ACCACTAAAGCTCTCCACAG+TGG | + | chr2_4:52052408-52052427 | None:intergenic | 50.0% | |
! | GGTGCGTCAGGAGCAATTTT+TGG | - | chr2_4:52052596-52052615 | Msa0333970:intron | 50.0% |
!! | GGTTTAGGTTGGATCGGTTG+CGG | - | chr2_4:52052839-52052858 | Msa0333970:CDS | 50.0% |
AGGCACAAAGACCTTGTAGG+AGG | - | chr2_4:52052873-52052892 | Msa0333970:intron | 50.0% | |
CACAAAGACCTTGTAGGAGG+TGG | - | chr2_4:52052876-52052895 | Msa0333970:intron | 50.0% | |
GCACCGTTAGAACACAGACA+AGG | + | chr2_4:52053265-52053284 | None:intergenic | 50.0% | |
CAGTTAGGAGGCTTGATTGG+TGG | - | chr2_4:52054238-52054257 | Msa0333970:intron | 50.0% | |
CATGGCTTATTGGACCTGCA+TGG | - | chr2_4:52054272-52054291 | Msa0333970:intron | 50.0% | |
GTGGATTCATGCTTCCATGC+AGG | + | chr2_4:52054289-52054308 | None:intergenic | 50.0% | |
TTACGAGAGGACCTAAGCCA+TGG | - | chr2_4:52054368-52054387 | Msa0333970:intron | 50.0% | |
GCCCAAGCCATTTCTGTCAC+CGG | - | chr2_4:52050515-52050534 | Msa0333970:three_prime_UTR | 55.0% | |
!! | TCTGTCACCGGTTTGCAAGG+TGG | - | chr2_4:52050527-52050546 | Msa0333970:three_prime_UTR | 55.0% |
!! | CTGTCACCGGTTTGCAAGGT+GGG | - | chr2_4:52050528-52050547 | Msa0333970:three_prime_UTR | 55.0% |
GACACGGTGGCTGAAATGGA+GGG | + | chr2_4:52050589-52050608 | None:intergenic | 55.0% | |
AGACACGGTGGCTGAAATGG+AGG | + | chr2_4:52050590-52050609 | None:intergenic | 55.0% | |
AAAGTGAAGGCGGAGACGGT+GGG | + | chr2_4:52050613-52050632 | None:intergenic | 55.0% | |
! | GCATTTCCAGAGCTGGCTTC+AGG | + | chr2_4:52051599-52051618 | None:intergenic | 55.0% |
TGAGTCGGCATTTCCAGAGC+TGG | + | chr2_4:52051606-52051625 | None:intergenic | 55.0% | |
GTTGCGCAACTTGCAACCCA+AGG | - | chr2_4:52052074-52052093 | Msa0333970:intron | 55.0% | |
! | CCCAAGGCAAGCTTTTGTCG+TGG | - | chr2_4:52052090-52052109 | Msa0333970:intron | 55.0% |
CCCACGACAAAAGCTTGCCT+TGG | + | chr2_4:52052094-52052113 | None:intergenic | 55.0% | |
! | GCTTTTGTCGTGGGGAGCAA+AGG | - | chr2_4:52052100-52052119 | Msa0333970:intron | 55.0% |
TGTCGTGGGGAGCAAAGGTA+AGG | - | chr2_4:52052105-52052124 | Msa0333970:intron | 55.0% | |
! | CCCACTGTGGAGAGCTTTAG+TGG | - | chr2_4:52052404-52052423 | Msa0333970:intron | 55.0% |
TGTTGAATTCCCACCCGGAG+CGG | + | chr2_4:52054739-52054758 | None:intergenic | 55.0% | |
GTGGCTGAAATGGAGGGACG+CGG | + | chr2_4:52050583-52050602 | None:intergenic | 60.0% | |
GGGAGACACGGTGGCTGAAA+TGG | + | chr2_4:52050593-52050612 | None:intergenic | 60.0% | |
GAAAGTGAAGGCGGAGACGG+TGG | + | chr2_4:52050614-52050633 | None:intergenic | 60.0% | |
GGAAGACCTGAAGCCAGCTC+TGG | - | chr2_4:52051590-52051609 | Msa0333970:intron | 60.0% | |
ATGCCTGCAGTAGGTGCGTC+AGG | - | chr2_4:52052584-52052603 | Msa0333970:intron | 60.0% | |
GCTGAAATGGAGGGACGCGG+CGG | + | chr2_4:52050580-52050599 | None:intergenic | 65.0% | |
GCTCCTGACGCACCTACTGC+AGG | + | chr2_4:52052590-52052609 | None:intergenic | 65.0% | |
GCGGTGCATCCAGGTGGGAT+TGG | + | chr2_4:52054720-52054739 | None:intergenic | 65.0% | |
GAAATGGAGGGACGCGGCGG+TGG | + | chr2_4:52050577-52050596 | None:intergenic | 70.0% | |
GGAGACGGTGGGAGACACGG+TGG | + | chr2_4:52050602-52050621 | None:intergenic | 70.0% | |
GGCGGAGACGGTGGGAGACA+CGG | + | chr2_4:52050605-52050624 | None:intergenic | 70.0% | |
CCGGAGCGGTGCATCCAGGT+GGG | + | chr2_4:52054725-52054744 | None:intergenic | 70.0% | |
CCCACCTGGATGCACCGCTC+CGG | - | chr2_4:52054722-52054741 | Msa0333970:CDS | 70.0% | |
CCACCTGGATGCACCGCTCC+GGG | - | chr2_4:52054723-52054742 | Msa0333970:CDS | 70.0% | |
CTGGATGCACCGCTCCGGGT+GGG | - | chr2_4:52054727-52054746 | Msa0333970:exon | 70.0% | |
CCCGGAGCGGTGCATCCAGG+TGG | + | chr2_4:52054726-52054745 | None:intergenic | 75.0% | |
CCACCCGGAGCGGTGCATCC+AGG | + | chr2_4:52054729-52054748 | None:intergenic | 75.0% | |
CCTGGATGCACCGCTCCGGG+TGG | - | chr2_4:52054726-52054745 | Msa0333970:exon | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 52050442 | 52054807 | 52050442 | ID=Msa0333970;Name=Msa0333970 |
chr2_4 | mRNA | 52050442 | 52054807 | 52050442 | ID=Msa0333970-mRNA-1;Parent=Msa0333970;Name=Msa0333970-mRNA-1;_AED=0.09;_eAED=0.09;_QI=65|1|1|1|1|1|9|411|327 |
chr2_4 | exon | 52050442 | 52051008 | 52050442 | ID=Msa0333970-mRNA-1:exon:15671;Parent=Msa0333970-mRNA-1 |
chr2_4 | exon | 52051906 | 52051947 | 52051906 | ID=Msa0333970-mRNA-1:exon:15670;Parent=Msa0333970-mRNA-1 |
chr2_4 | exon | 52052305 | 52052403 | 52052305 | ID=Msa0333970-mRNA-1:exon:15669;Parent=Msa0333970-mRNA-1 |
chr2_4 | exon | 52052627 | 52052694 | 52052627 | ID=Msa0333970-mRNA-1:exon:15668;Parent=Msa0333970-mRNA-1 |
chr2_4 | exon | 52052779 | 52052875 | 52052779 | ID=Msa0333970-mRNA-1:exon:15667;Parent=Msa0333970-mRNA-1 |
chr2_4 | exon | 52052960 | 52053040 | 52052960 | ID=Msa0333970-mRNA-1:exon:15666;Parent=Msa0333970-mRNA-1 |
chr2_4 | exon | 52053128 | 52053182 | 52053128 | ID=Msa0333970-mRNA-1:exon:15665;Parent=Msa0333970-mRNA-1 |
chr2_4 | exon | 52053556 | 52053794 | 52053556 | ID=Msa0333970-mRNA-1:exon:15664;Parent=Msa0333970-mRNA-1 |
chr2_4 | exon | 52054596 | 52054807 | 52054596 | ID=Msa0333970-mRNA-1:exon:15663;Parent=Msa0333970-mRNA-1 |
chr2_4 | five_prime_UTR | 52054743 | 52054807 | 52054743 | ID=Msa0333970-mRNA-1:five_prime_utr;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52054596 | 52054742 | 52054596 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52053556 | 52053794 | 52053556 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52053128 | 52053182 | 52053128 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52052960 | 52053040 | 52052960 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52052779 | 52052875 | 52052779 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52052627 | 52052694 | 52052627 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52052305 | 52052403 | 52052305 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52051906 | 52051947 | 52051906 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | CDS | 52050853 | 52051008 | 52050853 | ID=Msa0333970-mRNA-1:cds;Parent=Msa0333970-mRNA-1 |
chr2_4 | three_prime_UTR | 52050442 | 52050852 | 52050442 | ID=Msa0333970-mRNA-1:three_prime_utr;Parent=Msa0333970-mRNA-1 |
Gene Sequence |
Protein sequence |