Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206800 | XP_039686064.1 | 94.391 | 517 | 28 | 1 | 1 | 516 | 1 | 517 | 0.0 | 1028 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206800 | sp|Q9LMA1|FMO1_ARATH | 38.760 | 516 | 303 | 10 | 4 | 514 | 12 | 519 | 7.84e-128 | 386 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206800 | A0A396JCJ9 | 94.391 | 517 | 28 | 1 | 1 | 516 | 1 | 517 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012440 | Msa0206800 | 0.815588 | 8.559851e-52 | -8.615850e-47 |
| Msa0057240 | Msa0206800 | 0.824539 | 7.642993e-54 | -8.615850e-47 |
| Msa0084500 | Msa0206800 | 0.812643 | 3.824245e-51 | -8.615850e-47 |
| Msa0146920 | Msa0206800 | 0.802316 | 5.943167e-49 | -8.615850e-47 |
| Msa0149560 | Msa0206800 | 0.821233 | 4.501640e-53 | -8.615850e-47 |
| Msa0173090 | Msa0206800 | 0.807775 | 4.286518e-50 | -8.615850e-47 |
| Msa0176470 | Msa0206800 | 0.838767 | 2.365028e-57 | -8.615850e-47 |
| Msa0191040 | Msa0206800 | 0.876764 | 1.077453e-68 | -8.615850e-47 |
| Msa0194380 | Msa0206800 | 0.832561 | 8.811376e-56 | -8.615850e-47 |
| Msa0200030 | Msa0206800 | 0.802784 | 4.759992e-49 | -8.615850e-47 |
| Msa0206800 | Msa0219190 | 0.821253 | 4.454042e-53 | -8.615850e-47 |
| Msa0206800 | Msa0220010 | 0.800413 | 1.458009e-48 | -8.615850e-47 |
| Msa0206800 | Msa0220300 | 0.829312 | 5.524190e-55 | -8.615850e-47 |
| Msa0206800 | Msa0221090 | 0.811318 | 7.434278e-51 | -8.615850e-47 |
| Msa0206800 | Msa0233340 | 0.876634 | 1.194303e-68 | -8.615850e-47 |
| Msa0206800 | Msa0236110 | 0.857534 | 1.529086e-62 | -8.615850e-47 |
| Msa0206800 | Msa0242540 | 0.802165 | 6.384146e-49 | -8.615850e-47 |
| Msa0206800 | Msa0251240 | 0.833452 | 5.290519e-56 | -8.615850e-47 |
| Msa0206800 | Msa0261330 | 0.804728 | 1.879385e-49 | -8.615850e-47 |
| Msa0206800 | Msa0273990 | 0.837583 | 4.772307e-57 | -8.615850e-47 |
| Msa0206800 | Msa0277290 | 0.848931 | 4.474272e-60 | -8.615850e-47 |
| Msa0206800 | Msa0280750 | 0.811920 | 5.498318e-51 | -8.615850e-47 |
| Msa0206800 | Msa0288190 | 0.925740 | 1.217460e-90 | -8.615850e-47 |
| Msa0206800 | Msa0288200 | 0.936814 | 9.495626e-98 | -8.615850e-47 |
| Msa0206800 | Msa0298240 | 0.820965 | 5.188657e-53 | -8.615850e-47 |
| Msa0206800 | Msa0301200 | 0.812834 | 3.472484e-51 | -8.615850e-47 |
| Msa0206800 | Msa0311690 | 0.872704 | 2.592026e-67 | -8.615850e-47 |
| Msa0206800 | Msa0311790 | 0.804413 | 2.186674e-49 | -8.615850e-47 |
| Msa0206800 | Msa0314630 | 0.858702 | 6.873329e-63 | -8.615850e-47 |
| Msa0206800 | Msa0315250 | 0.804345 | 2.258814e-49 | -8.615850e-47 |
| Msa0206800 | Msa0322860 | 0.814020 | 1.905605e-51 | -8.615850e-47 |
| Msa0206800 | Msa0326540 | 0.960900 | 4.403410e-119 | -8.615850e-47 |
| Msa0206800 | Msa0331530 | 0.832104 | 1.143418e-55 | -8.615850e-47 |
| Msa0206800 | Msa0331540 | 0.828058 | 1.110252e-54 | -8.615850e-47 |
| Msa0206800 | Msa0351770 | 0.811130 | 8.167079e-51 | -8.615850e-47 |
| Msa0206800 | Msa0373960 | 0.833478 | 5.212167e-56 | -8.615850e-47 |
| Msa0206800 | Msa0413930 | 0.802834 | 4.647471e-49 | -8.615850e-47 |
| Msa0206800 | Msa0423100 | 0.836334 | 9.945093e-57 | -8.615850e-47 |
| Msa0206800 | Msa0436500 | 0.807681 | 4.487616e-50 | -8.615850e-47 |
| Msa0206800 | Msa0464540 | 0.804435 | 2.163030e-49 | -8.615850e-47 |
| Msa0206800 | Msa0469260 | 0.821507 | 3.891202e-53 | -8.615850e-47 |
| Msa0206800 | Msa0481110 | 0.802631 | 5.117919e-49 | -8.615850e-47 |
| Msa0206800 | Msa0520510 | 0.848601 | 5.525269e-60 | -8.615850e-47 |
| Msa0206800 | Msa0531430 | 0.824556 | 7.570561e-54 | -8.615850e-47 |
| Msa0206800 | Msa0534570 | 0.837642 | 4.608423e-57 | -8.615850e-47 |
| Msa0206800 | Msa0534590 | 0.816404 | 5.628115e-52 | -8.615850e-47 |
| Msa0206800 | Msa0575740 | 0.824995 | 5.967388e-54 | -8.615850e-47 |
| Msa0206800 | Msa0590800 | 0.815940 | 7.144375e-52 | -8.615850e-47 |
| Msa0206800 | Msa0591800 | 0.804544 | 2.052701e-49 | -8.615850e-47 |
| Msa0206800 | Msa0611380 | 0.838589 | 2.629368e-57 | -8.615850e-47 |
| Msa0206800 | Msa0631120 | 0.819394 | 1.188761e-52 | -8.615850e-47 |
| Msa0206800 | Msa0666030 | 0.842157 | 3.068821e-58 | -8.615850e-47 |
| Msa0206800 | Msa0667850 | 0.800385 | 1.477615e-48 | -8.615850e-47 |
| Msa0206800 | Msa0716450 | 0.821691 | 3.528968e-53 | -8.615850e-47 |
| Msa0206800 | Msa0717260 | 0.815376 | 9.544083e-52 | -8.615850e-47 |
| Msa0206800 | Msa0742180 | 0.801955 | 7.053265e-49 | -8.615850e-47 |
| Msa0206800 | Msa0758320 | 0.803762 | 2.986177e-49 | -8.615850e-47 |
| Msa0206800 | Msa0799030 | 0.815219 | 1.033911e-51 | -8.615850e-47 |
| Msa0206800 | Msa0810020 | 0.817353 | 3.446256e-52 | -8.615850e-47 |
| Msa0206800 | Msa0812820 | 0.806861 | 6.698282e-50 | -8.615850e-47 |
| Msa0206800 | Msa0823400 | 0.828957 | 6.735562e-55 | -8.615850e-47 |
| Msa0206800 | Msa0837980 | 0.808736 | 2.674350e-50 | -8.615850e-47 |
| Msa0206800 | Msa0858840 | 0.801995 | 6.921083e-49 | -8.615850e-47 |
| Msa0206800 | Msa0862310 | 0.824540 | 7.638817e-54 | -8.615850e-47 |
| Msa0206800 | Msa0870620 | 0.805204 | 1.494528e-49 | -8.615850e-47 |
| Msa0206800 | Msa0880710 | 0.830474 | 2.877212e-55 | -8.615850e-47 |
| Msa0206800 | Msa0885060 | 0.841913 | 3.561430e-58 | -8.615850e-47 |
| Msa0206800 | Msa0929870 | 0.819808 | 9.560209e-53 | -8.615850e-47 |
| Msa0206800 | Msa0946210 | 0.834109 | 3.624609e-56 | -8.615850e-47 |
| Msa0206800 | Msa0965310 | 0.826418 | 2.742169e-54 | -8.615850e-47 |
| Msa0206800 | Msa0979510 | 0.863048 | 3.287706e-64 | -8.615850e-47 |
| Msa0206800 | Msa0999340 | 0.842279 | 2.848489e-58 | -8.615850e-47 |
| Msa0206800 | Msa0999350 | 0.814447 | 1.533212e-51 | -8.615850e-47 |
| Msa0206800 | Msa0999390 | 0.825018 | 5.891290e-54 | -8.615850e-47 |
| Msa0206800 | Msa0999400 | 0.807253 | 5.532069e-50 | -8.615850e-47 |
| Msa0206800 | Msa0999700 | 0.811569 | 6.557239e-51 | -8.615850e-47 |
| Msa0206800 | Msa1002620 | 0.805035 | 1.621173e-49 | -8.615850e-47 |
| Msa0206800 | Msa1033560 | 0.833349 | 5.612033e-56 | -8.615850e-47 |
| Msa0206800 | Msa1034680 | 0.825502 | 4.527575e-54 | -8.615850e-47 |
| Msa0206800 | Msa1042670 | 0.808042 | 3.761297e-50 | -8.615850e-47 |
| Msa0206800 | Msa1073340 | 0.842399 | 2.647628e-58 | -8.615850e-47 |
| Msa0206800 | Msa1073350 | 0.834470 | 2.942544e-56 | -8.615850e-47 |
| Msa0206800 | Msa1113850 | 0.876714 | 1.120883e-68 | -8.615850e-47 |
| Msa0206800 | Msa1145020 | 0.817180 | 3.769573e-52 | -8.615850e-47 |
| Msa0206800 | Msa1160400 | 0.839607 | 1.432484e-57 | -8.615850e-47 |
| Msa0206800 | Msa1169990 | 0.801730 | 7.844962e-49 | -8.615850e-47 |
| Msa0206800 | Msa1174110 | 0.807143 | 5.835900e-50 | -8.615850e-47 |
| Msa0206800 | Msa1177400 | 0.815166 | 1.062296e-51 | -8.615850e-47 |
| Msa0206800 | Msa1179520 | 0.813684 | 2.259680e-51 | -8.615850e-47 |
| Msa0206800 | Msa1217940 | 0.806604 | 7.587225e-50 | -8.615850e-47 |
| Msa0206800 | Msa1218480 | 0.817474 | 3.236787e-52 | -8.615850e-47 |
| Msa0206800 | Msa1227950 | 0.805175 | 1.515356e-49 | -8.615850e-47 |
| Msa0206800 | Msa1227970 | 0.814842 | 1.253733e-51 | -8.615850e-47 |
| Msa0206800 | Msa1228190 | 0.807676 | 4.498814e-50 | -8.615850e-47 |
| Msa0206800 | Msa1271260 | 0.835655 | 1.479189e-56 | -8.615850e-47 |
| Msa0206800 | Msa1294290 | 0.807390 | 5.174351e-50 | -8.615850e-47 |
| Msa0206800 | Msa1321000 | 0.801553 | 8.528893e-49 | -8.615850e-47 |
| Msa0206800 | Msa1339940 | 0.802238 | 6.168208e-49 | -8.615850e-47 |
| Msa0206800 | Msa1345420 | 0.850034 | 2.203643e-60 | -8.615850e-47 |
| Msa0206800 | Msa1389050 | 0.818264 | 2.146628e-52 | -8.615850e-47 |
| Msa0206800 | Msa1420060 | 0.833061 | 6.620496e-56 | -8.615850e-47 |
| Msa0206800 | Msa1421550 | 0.826059 | 3.339113e-54 | -8.615850e-47 |
| Msa0206800 | Msa1429420 | 0.812601 | 3.905546e-51 | -8.615850e-47 |
| Msa0206800 | Msa1435480 | 0.840608 | 7.847931e-58 | -8.615850e-47 |
| Msa0206800 | Msa1440340 | 0.834284 | 3.276499e-56 | -8.615850e-47 |
| Msa0206800 | Msa1442590 | 0.806350 | 8.586562e-50 | -8.615850e-47 |
| Msa0206800 | Msa1442630 | 0.847517 | 1.099748e-59 | -8.615850e-47 |
| Msa0206800 | Msa1458910 | 0.849553 | 3.003743e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206800 | MtrunA17_Chr2g0305211 | 94.391 | 517 | 28 | 1 | 1 | 516 | 1 | 517 | 0.0 | 1028 |
| Msa0206800 | MtrunA17_Chr2g0305231 | 94.391 | 517 | 28 | 1 | 1 | 516 | 1 | 517 | 0.0 | 1028 |
| Msa0206800 | MtrunA17_Chr2g0304721 | 78.917 | 517 | 105 | 2 | 1 | 516 | 1 | 514 | 0.0 | 853 |
| Msa0206800 | MtrunA17_Chr2g0304651 | 75.242 | 517 | 125 | 2 | 1 | 516 | 1 | 515 | 0.0 | 813 |
| Msa0206800 | MtrunA17_Chr2g0301661 | 38.791 | 513 | 303 | 8 | 5 | 513 | 14 | 519 | 1.23e-122 | 369 |
| Msa0206800 | MtrunA17_Chr4g0070101 | 40.080 | 499 | 285 | 11 | 21 | 513 | 29 | 519 | 7.63e-121 | 365 |
| Msa0206800 | MtrunA17_Chr2g0301471 | 39.105 | 514 | 302 | 8 | 4 | 513 | 13 | 519 | 1.75e-120 | 364 |
| Msa0206800 | MtrunA17_Chr4g0070111 | 38.869 | 283 | 168 | 4 | 233 | 514 | 1 | 279 | 8.83e-67 | 217 |
| Msa0206800 | MtrunA17_Chr2g0286701 | 37.447 | 235 | 142 | 4 | 1 | 233 | 10 | 241 | 4.92e-55 | 187 |
| Msa0206800 | MtrunA17_Chr4g0070121 | 43.478 | 207 | 115 | 2 | 21 | 225 | 29 | 235 | 2.56e-51 | 175 |
| Msa0206800 | MtrunA17_Chr2g0286681 | 40.171 | 117 | 68 | 2 | 272 | 388 | 4 | 118 | 4.55e-22 | 91.7 |
| Msa0206800 | MtrunA17_Chr7g0268621 | 27.985 | 268 | 153 | 11 | 2 | 265 | 3 | 234 | 1.04e-16 | 82.0 |
| Msa0206800 | MtrunA17_Chr1g0182991 | 25.668 | 374 | 214 | 18 | 7 | 376 | 27 | 340 | 2.06e-16 | 81.6 |
| Msa0206800 | MtrunA17_Chr8g0352461 | 27.381 | 252 | 126 | 9 | 5 | 232 | 4 | 222 | 2.76e-16 | 81.3 |
| Msa0206800 | MtrunA17_Chr8g0352481 | 25.397 | 252 | 130 | 8 | 5 | 232 | 4 | 221 | 2.91e-15 | 78.2 |
| Msa0206800 | MtrunA17_Chr2g0286671 | 36.634 | 101 | 62 | 2 | 414 | 513 | 1 | 100 | 8.28e-15 | 70.5 |
| Msa0206800 | MtrunA17_Chr1g0169111 | 26.385 | 379 | 210 | 20 | 6 | 376 | 103 | 420 | 8.45e-14 | 73.9 |
| Msa0206800 | MtrunA17_Chr4g0025641 | 29.646 | 226 | 121 | 11 | 1 | 223 | 12 | 202 | 2.18e-13 | 70.1 |
| Msa0206800 | MtrunA17_Chr3g0091441 | 26.587 | 252 | 136 | 8 | 3 | 229 | 11 | 238 | 2.26e-12 | 69.3 |
| Msa0206800 | MtrunA17_Chr3g0125691 | 24.346 | 382 | 214 | 16 | 1 | 374 | 3 | 317 | 8.07e-12 | 67.0 |
| Msa0206800 | MtrunA17_Chr5g0412881 | 23.810 | 378 | 219 | 16 | 2 | 374 | 3 | 316 | 1.03e-11 | 66.6 |
| Msa0206800 | MtrunA17_Chr3g0139441 | 25.105 | 239 | 135 | 9 | 6 | 239 | 40 | 239 | 2.07e-11 | 65.9 |
| Msa0206800 | MtrunA17_Chr3g0125701 | 23.810 | 399 | 228 | 16 | 1 | 390 | 3 | 334 | 3.83e-11 | 65.1 |
| Msa0206800 | MtrunA17_Chr3g0125711 | 23.810 | 399 | 228 | 16 | 1 | 390 | 3 | 334 | 3.90e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206800 | AT1G19250.1 | 38.760 | 516 | 303 | 10 | 4 | 514 | 12 | 519 | 7.97e-129 | 386 |
| Msa0206800 | AT5G45180.1 | 36.308 | 493 | 259 | 13 | 4 | 490 | 12 | 455 | 2.75e-103 | 318 |
| Msa0206800 | AT1G62560.2 | 25.197 | 254 | 131 | 10 | 3 | 229 | 11 | 232 | 1.49e-13 | 72.8 |
| Msa0206800 | AT1G62560.1 | 25.197 | 254 | 131 | 10 | 3 | 229 | 11 | 232 | 1.65e-13 | 73.2 |
| Msa0206800 | AT4G28720.1 | 26.247 | 381 | 208 | 20 | 6 | 376 | 26 | 343 | 2.31e-13 | 72.4 |
| Msa0206800 | AT1G62620.2 | 25.000 | 252 | 135 | 9 | 4 | 229 | 12 | 235 | 2.92e-13 | 72.0 |
| Msa0206800 | AT1G62620.1 | 25.000 | 252 | 135 | 9 | 4 | 229 | 12 | 235 | 3.46e-13 | 72.0 |
| Msa0206800 | AT1G63370.2 | 25.000 | 252 | 135 | 7 | 4 | 229 | 12 | 235 | 5.24e-13 | 70.9 |
| Msa0206800 | AT1G63370.1 | 25.000 | 252 | 135 | 7 | 4 | 229 | 12 | 235 | 6.33e-13 | 71.2 |
| Msa0206800 | AT1G65860.1 | 22.327 | 318 | 173 | 11 | 3 | 279 | 11 | 295 | 2.55e-12 | 69.3 |
| Msa0206800 | AT1G21430.1 | 26.005 | 373 | 209 | 14 | 5 | 374 | 9 | 317 | 6.37e-12 | 67.8 |
| Msa0206800 | AT4G32540.1 | 24.138 | 377 | 213 | 17 | 7 | 376 | 23 | 333 | 1.09e-11 | 67.4 |
| Msa0206800 | AT4G32540.2 | 25.403 | 248 | 139 | 11 | 7 | 251 | 23 | 227 | 2.69e-11 | 65.9 |
| Msa0206800 | AT1G12200.1 | 25.197 | 254 | 135 | 7 | 3 | 229 | 12 | 237 | 3.62e-11 | 65.9 |
| Msa0206800 | AT1G12200.2 | 25.197 | 254 | 135 | 7 | 3 | 229 | 12 | 237 | 3.71e-11 | 65.5 |
Find 124 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTACCTTTAAAGATTTC+TGG | 0.118162 | 2_1:+36778552 | None:intergenic |
| TATATTTATTGCTGCAATTC+TGG | 0.192634 | 2_1:+36775046 | None:intergenic |
| TGCAAATATGCTCTACAAAT+TGG | 0.214406 | 2_1:-36779639 | Msa0206800:CDS |
| GGGCTTATCTTCTCCATTAA+TGG | 0.222471 | 2_1:+36777079 | None:intergenic |
| AAAGAAGGTTTAACCATTAA+TGG | 0.223564 | 2_1:-36777092 | Msa0206800:CDS |
| GGAAGTCTTGTTTGTTAGTT+TGG | 0.241397 | 2_1:+36779541 | None:intergenic |
| AAATAAGTGGGGTGGGGTGG+GGG | 0.249747 | 2_1:-36775100 | Msa0206800:three_prime_UTR |
| TTGTGATTTCTTTATATTGA+TGG | 0.268932 | 2_1:+36777130 | None:intergenic |
| ACGCTTAATATCCTCTTATA+TGG | 0.270319 | 2_1:+36779745 | None:intergenic |
| TGTTATGAAACTAAAGAAAT+AGG | 0.275402 | 2_1:+36779772 | None:intergenic |
| TGGAAGTCCATTTGGTTCTA+AGG | 0.280378 | 2_1:-36779322 | Msa0206800:CDS |
| AATAACTAGGTCAGCTTCTT+GGG | 0.283161 | 2_1:+36777058 | None:intergenic |
| AAAATAAGTGGGGTGGGGTG+GGG | 0.284960 | 2_1:-36775101 | Msa0206800:three_prime_UTR |
| AGGTAAAGTTATGCATTCTT+TGG | 0.285374 | 2_1:-36778538 | Msa0206800:CDS |
| TCAATGGCTGGCGCATCTTT+TGG | 0.285635 | 2_1:-36775441 | Msa0206800:CDS |
| AAATGAAGTCATGGGAATTA+TGG | 0.290096 | 2_1:-36779353 | Msa0206800:CDS |
| GAAACCAGTGTGTAGTTCTT+TGG | 0.303585 | 2_1:+36778257 | None:intergenic |
| TTACATCTTCTTGTAATTGT+AGG | 0.305849 | 2_1:-36775139 | Msa0206800:three_prime_UTR |
| ACAAAATAAGTGGGGTGGGG+TGG | 0.309757 | 2_1:-36775103 | Msa0206800:three_prime_UTR |
| ATTCCACAATTGGCAATAAT+AGG | 0.330890 | 2_1:-36775509 | Msa0206800:CDS |
| ATGATGGCATTGGTGGAATA+TGG | 0.334253 | 2_1:-36779590 | Msa0206800:CDS |
| GAATAACTAGGTCAGCTTCT+TGG | 0.335174 | 2_1:+36777057 | None:intergenic |
| CATGCATTACGTGTGGGATA+TGG | 0.336927 | 2_1:-36775319 | Msa0206800:CDS |
| AATAAGTGGGGTGGGGTGGG+GGG | 0.340258 | 2_1:-36775099 | Msa0206800:three_prime_UTR |
| AGCTGCAGTCTTGTTGTCTA+AGG | 0.341399 | 2_1:+36778506 | None:intergenic |
| GACATTGCGGGCATTAATCT+TGG | 0.343163 | 2_1:-36778223 | Msa0206800:CDS |
| CTTTACCTTTAAAGATTTCT+GGG | 0.345088 | 2_1:+36778553 | None:intergenic |
| CAAAATAAGTGGGGTGGGGT+GGG | 0.348110 | 2_1:-36775102 | Msa0206800:three_prime_UTR |
| AAAGGCCCAGAAATCTTTAA+AGG | 0.357841 | 2_1:-36778558 | Msa0206800:CDS |
| CCCATGGAAAATCTGTAAAC+TGG | 0.363372 | 2_1:+36779520 | None:intergenic |
| ATTCTTGCCACGGGATATAA+AGG | 0.367862 | 2_1:-36777038 | Msa0206800:CDS |
| ATCTTGAAGAAAACTGTAAT+CGG | 0.368612 | 2_1:+36777214 | None:intergenic |
| TCATTGATATTGATTATGTT+GGG | 0.373374 | 2_1:-36779389 | Msa0206800:CDS |
| TCTTGCACTTGTTGATTGCT+TGG | 0.382182 | 2_1:+36779474 | None:intergenic |
| TTGGAATTGAATCTTATGTA+TGG | 0.382205 | 2_1:+36779414 | None:intergenic |
| GCTGAGCTATTTGAACCATA+TGG | 0.382963 | 2_1:-36775236 | Msa0206800:CDS |
| AAGTTTCAGTATAAAAGAAA+TGG | 0.388381 | 2_1:-36779709 | Msa0206800:exon |
| TTGTTTGTTAGTTTGGAGTT+TGG | 0.394924 | 2_1:+36779548 | None:intergenic |
| ATACTGAAACTTATAATAGT+TGG | 0.395748 | 2_1:+36779720 | None:intergenic |
| GCTATTTGCAGTAATATTGA+TGG | 0.401435 | 2_1:+36775071 | None:intergenic |
| GTCATTGATATTGATTATGT+TGG | 0.404807 | 2_1:-36779390 | Msa0206800:CDS |
| CTTTGCATTGGAAAGTATAG+TGG | 0.412036 | 2_1:-36778612 | Msa0206800:CDS |
| AATTTGTAGAGCATATTTGC+AGG | 0.413362 | 2_1:+36779641 | None:intergenic |
| TTGTTGAAACATATTTGAAA+TGG | 0.419853 | 2_1:-36777268 | Msa0206800:CDS |
| ATGCCCGCAATGTCAAAATC+TGG | 0.420705 | 2_1:+36778232 | None:intergenic |
| CATTTGGTTCTAAGGGAACT+TGG | 0.423541 | 2_1:-36779314 | Msa0206800:CDS |
| AGCTTTAGCTTCTGCAAAGA+AGG | 0.430511 | 2_1:-36777107 | Msa0206800:CDS |
| TCATCAGATTCGTAGACAAT+TGG | 0.431340 | 2_1:+36779609 | None:intergenic |
| TGAAAATGTGGGAAGAGAAC+AGG | 0.433069 | 2_1:-36775373 | Msa0206800:CDS |
| AGAGTTACAATAGTAGGCTC+AGG | 0.434337 | 2_1:-36778465 | Msa0206800:CDS |
| ATAATCAATATCAATGACTT+TGG | 0.438062 | 2_1:+36779395 | None:intergenic |
| TGGGAATTATGGAGTGGTAA+TGG | 0.443970 | 2_1:-36779342 | Msa0206800:CDS |
| TTGAAATCAGTGGGGCCATA+TGG | 0.449343 | 2_1:+36775221 | None:intergenic |
| AAGTTTGTCATTCTTTGCAT+TGG | 0.451719 | 2_1:-36778624 | Msa0206800:CDS |
| AACAAGAGAGTTACAATAGT+AGG | 0.452094 | 2_1:-36778471 | Msa0206800:CDS |
| TATTAGTATTCATTCACTTA+CGG | 0.457548 | 2_1:+36775190 | None:intergenic |
| AGTGGTAATGGAAGTCCATT+TGG | 0.462695 | 2_1:-36779330 | Msa0206800:CDS |
| GGAAGTCCATTTGGTTCTAA+GGG | 0.467978 | 2_1:-36779321 | Msa0206800:CDS |
| TATGGCCCCACTGATTTCAA+TGG | 0.474989 | 2_1:-36775218 | Msa0206800:CDS |
| GTATATACAAACCTGTAGAT+AGG | 0.475274 | 2_1:+36776939 | None:intergenic |
| GGCCACTTTACTTTCACCAT+TGG | 0.477134 | 2_1:-36778128 | Msa0206800:intron |
| GAATCTTATGTATGGAATGA+TGG | 0.480663 | 2_1:+36779422 | None:intergenic |
| TCACCCTCGAATTCCACAAT+TGG | 0.481469 | 2_1:-36775519 | Msa0206800:CDS |
| TATCCTATTATTGCCAATTG+TGG | 0.489403 | 2_1:+36775506 | None:intergenic |
| AATGTTGCAATTGTTGGGGC+AGG | 0.496768 | 2_1:-36779681 | Msa0206800:CDS |
| TATAGTAAGTACAAAATAAG+TGG | 0.497166 | 2_1:-36775113 | Msa0206800:three_prime_UTR |
| GACAAGCCATTGAAATCAGT+GGG | 0.509463 | 2_1:+36775212 | None:intergenic |
| AAGTACAAAATAAGTGGGGT+GGG | 0.510534 | 2_1:-36775107 | Msa0206800:three_prime_UTR |
| CTCATGAAGAAATGAAGTCA+TGG | 0.511087 | 2_1:-36779362 | Msa0206800:CDS |
| ACTCAACGGTTCCTATCTAC+AGG | 0.514369 | 2_1:-36776950 | Msa0206800:intron |
| ATATCTCTACATGTCGAGCT+GGG | 0.514908 | 2_1:-36777193 | Msa0206800:CDS |
| AGCTGCCACTGAAGAAGTAC+GGG | 0.515558 | 2_1:-36777244 | Msa0206800:CDS |
| CATAACATAAACCATATAAG+AGG | 0.518015 | 2_1:-36779756 | Msa0206800:five_prime_UTR |
| GAAATTCTTAGTATCTTCTA+CGG | 0.519004 | 2_1:+36779284 | None:intergenic |
| TGGAAAATGATGTGAAAATG+TGG | 0.519496 | 2_1:-36775385 | Msa0206800:CDS |
| GATATCTCTACATGTCGAGC+TGG | 0.519980 | 2_1:-36777194 | Msa0206800:CDS |
| ATAGTAAGTACAAAATAAGT+GGG | 0.521051 | 2_1:-36775112 | Msa0206800:three_prime_UTR |
| AAGTGGCCACAAGGCTAAGT+AGG | 0.524274 | 2_1:+36778143 | None:intergenic |
| TCTTGAAGAAAACTGTAATC+GGG | 0.524939 | 2_1:+36777215 | None:intergenic |
| CTAAGTAGGAATGGTTCTCC+AGG | 0.528761 | 2_1:+36778157 | None:intergenic |
| GAATCTGATGATGGCATTGG+TGG | 0.530274 | 2_1:-36779597 | Msa0206800:CDS |
| ATTGCCAATTGTGGAATTCG+AGG | 0.531426 | 2_1:+36775515 | None:intergenic |
| AAGCTGCCACTGAAGAAGTA+CGG | 0.532930 | 2_1:-36777245 | Msa0206800:CDS |
| CAAGTTCCCTTAGAACCAAA+TGG | 0.541301 | 2_1:+36779315 | None:intergenic |
| AAAGTAGAGAGAAATAGAGA+AGG | 0.543386 | 2_1:+36779804 | None:intergenic |
| ATTGTCTACGAATCTGATGA+TGG | 0.545835 | 2_1:-36779606 | Msa0206800:CDS |
| ATTGTTGGGGCAGGAATAAG+TGG | 0.555531 | 2_1:-36779672 | Msa0206800:CDS |
| TTGCCAATTGTGGAATTCGA+GGG | 0.558750 | 2_1:+36775516 | None:intergenic |
| ACTTCCTAGCATAAGAGAGA+TGG | 0.562419 | 2_1:-36775405 | Msa0206800:CDS |
| CATTGATATTGATTATGTTG+GGG | 0.562755 | 2_1:-36779388 | Msa0206800:CDS |
| TTGGTCACCTTTATATCCCG+TGG | 0.565549 | 2_1:+36777031 | None:intergenic |
| TAAGTACAAAATAAGTGGGG+TGG | 0.571482 | 2_1:-36775108 | Msa0206800:three_prime_UTR |
| TCATGAAGAAATGAAGTCAT+GGG | 0.573176 | 2_1:-36779361 | Msa0206800:CDS |
| GCTGAATGTGCAAATGCAAA+TGG | 0.573735 | 2_1:-36778420 | Msa0206800:intron |
| TGACCTAGTTATTCTTGCCA+CGG | 0.575160 | 2_1:-36777048 | Msa0206800:CDS |
| TACCAATGGTGAAAGTAAAG+TGG | 0.578127 | 2_1:+36778126 | None:intergenic |
| GCCACAAGGCTAAGTAGGAA+TGG | 0.579646 | 2_1:+36778148 | None:intergenic |
| CTAATGAAATGAGATGTCAA+TGG | 0.582072 | 2_1:-36775457 | Msa0206800:CDS |
| CAAGATCATGCATTACGTGT+GGG | 0.582997 | 2_1:-36775325 | Msa0206800:CDS |
| GCCACTGAAGAAGTACGGGC+TGG | 0.586016 | 2_1:-36777240 | Msa0206800:CDS |
| GACCTAGTTATTCTTGCCAC+GGG | 0.588033 | 2_1:-36777047 | Msa0206800:CDS |
| ATAACTAGGTCAGCTTCTTG+GGG | 0.588569 | 2_1:+36777059 | None:intergenic |
| TCAAGATCATGCATTACGTG+TGG | 0.593649 | 2_1:-36775326 | Msa0206800:CDS |
| GAGTTACAATAGTAGGCTCA+GGG | 0.602052 | 2_1:-36778464 | Msa0206800:CDS |
| CAACGAATCTGCAGACTCAA+CGG | 0.605967 | 2_1:-36776964 | Msa0206800:CDS |
| ACCATTCCTACTTAGCCTTG+TGG | 0.606013 | 2_1:-36778149 | Msa0206800:CDS |
| GTACCAAAAGCTCCGCAAAA+CGG | 0.609482 | 2_1:+36778185 | None:intergenic |
| TGAAATGAGATGTCAATGGC+TGG | 0.610788 | 2_1:-36775453 | Msa0206800:CDS |
| TACGAATCTGATGATGGCAT+TGG | 0.612809 | 2_1:-36779600 | Msa0206800:CDS |
| GTGAAAGTAAAGTGGCCACA+AGG | 0.620197 | 2_1:+36778134 | None:intergenic |
| ATCCCGTGGCAAGAATAACT+AGG | 0.620371 | 2_1:+36777045 | None:intergenic |
| ACCAGCCCGTACTTCTTCAG+TGG | 0.620675 | 2_1:+36777239 | None:intergenic |
| TTTGTAAATTCAGGTTCACA+AGG | 0.623646 | 2_1:-36778649 | Msa0206800:intron |
| GGAAAATGATGTGAAAATGT+GGG | 0.624056 | 2_1:-36775384 | Msa0206800:CDS |
| GGACAAGCCATTGAAATCAG+TGG | 0.627728 | 2_1:+36775211 | None:intergenic |
| AGTACAAAATAAGTGGGGTG+GGG | 0.631400 | 2_1:-36775106 | Msa0206800:three_prime_UTR |
| GTTCTTTGGATAATTGTGCA+AGG | 0.631927 | 2_1:+36778271 | None:intergenic |
| TATCTCTACATGTCGAGCTG+GGG | 0.655759 | 2_1:-36777192 | Msa0206800:CDS |
| AAGTCATGGGAATTATGGAG+TGG | 0.662418 | 2_1:-36779348 | Msa0206800:CDS |
| TTCATATTTACATACCTCGG+TGG | 0.678741 | 2_1:+36779260 | None:intergenic |
| TTATCCAAAGAACTACACAC+TGG | 0.687255 | 2_1:-36778261 | Msa0206800:CDS |
| TACTAAGAATTTCACCACCG+AGG | 0.721507 | 2_1:-36779274 | Msa0206800:intron |
| TAGTAAGTACAAAATAAGTG+GGG | 0.725232 | 2_1:-36775111 | Msa0206800:three_prime_UTR |
| ACAAGCCATTGAAATCAGTG+GGG | 0.776997 | 2_1:+36775213 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATTAATAAAAATAAA+AGG | + | chr2_1:36777347-36777366 | None:intergenic | 0.0% |
| !!! | TTTAAGACAAATTTTATAAT+GGG | - | chr2_1:36775767-36775786 | Msa0206800:intron | 10.0% |
| !!! | TTTTTTTATTCAAAATTTGA+AGG | - | chr2_1:36775916-36775935 | Msa0206800:intron | 10.0% |
| !!! | TAAAATATTTAATTAGCTTA+AGG | - | chr2_1:36776087-36776106 | Msa0206800:intron | 10.0% |
| !!! | ATTATTAAATTTTTAGAGAA+CGG | - | chr2_1:36777515-36777534 | Msa0206800:intron | 10.0% |
| !!! | TTTTTTGACAAAATAATAAA+AGG | - | chr2_1:36777663-36777682 | Msa0206800:intron | 10.0% |
| !! | ATCATTTAGTTAATTAAATA+TGG | - | chr2_1:36778048-36778067 | Msa0206800:intron | 10.0% |
| !! | TCATTTAGTTAATTAAATAT+GGG | - | chr2_1:36778049-36778068 | Msa0206800:intron | 10.0% |
| !!! | TAATTGAATTTTTTTTTGAA+AGG | + | chr2_1:36778301-36778320 | None:intergenic | 10.0% |
| !!! | AAAAAATCATTTTTGTTTAA+GGG | + | chr2_1:36778496-36778515 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATATTAGCTAT+TGG | + | chr2_1:36778612-36778631 | None:intergenic | 10.0% |
| !! | AATATTTACTAAAAATAGTA+AGG | + | chr2_1:36779036-36779055 | None:intergenic | 10.0% |
| !! | ATAAATATGATATAAATAGT+GGG | + | chr2_1:36779203-36779222 | None:intergenic | 10.0% |
| !! | TATAAATATGATATAAATAG+TGG | + | chr2_1:36779204-36779223 | None:intergenic | 10.0% |
| !!! | TTTCATATTTTTTTCTTGTT+TGG | - | chr2_1:36775626-36775645 | Msa0206800:intron | 15.0% |
| !!! | TTCATATTTTTTTCTTGTTT+GGG | - | chr2_1:36775627-36775646 | Msa0206800:intron | 15.0% |
| !!! | GTTTAAGACAAATTTTATAA+TGG | - | chr2_1:36775766-36775785 | Msa0206800:intron | 15.0% |
| !! | TCAACTAATTAATAATAAAG+CGG | - | chr2_1:36776752-36776771 | Msa0206800:intron | 15.0% |
| !! | AATATATGTAAAAGTTTACA+TGG | - | chr2_1:36776970-36776989 | Msa0206800:CDS | 15.0% |
| !! | ATATATGTAAAAGTTTACAT+GGG | - | chr2_1:36776971-36776990 | Msa0206800:CDS | 15.0% |
| !! | TAAAAATAAAACAAGATTGA+GGG | + | chr2_1:36777119-36777138 | None:intergenic | 15.0% |
| !! | ATAAAAATAAAACAAGATTG+AGG | + | chr2_1:36777120-36777139 | None:intergenic | 15.0% |
| !!! | TTATTAAATTTTTAGAGAAC+GGG | - | chr2_1:36777516-36777535 | Msa0206800:intron | 15.0% |
| !!! | AAAAATCATTTTTGTTTAAG+GGG | + | chr2_1:36778495-36778514 | None:intergenic | 15.0% |
| !!! | GAAAAAATCATTTTTGTTTA+AGG | + | chr2_1:36778497-36778516 | None:intergenic | 15.0% |
| !! | TAAATGTTAAGTAGATATAA+CGG | + | chr2_1:36778572-36778591 | None:intergenic | 15.0% |
| !!! | TTGTCCTTTTATTTTTTTAA+TGG | + | chr2_1:36778755-36778774 | None:intergenic | 15.0% |
| !! | ATTAAAAAAATAAAAGGACA+AGG | - | chr2_1:36778754-36778773 | Msa0206800:intron | 15.0% |
| !!! | TAATAATTACAGTTTTTTTG+AGG | - | chr2_1:36778888-36778907 | Msa0206800:intron | 15.0% |
| !!! | AATAATTACAGTTTTTTTGA+GGG | - | chr2_1:36778889-36778908 | Msa0206800:intron | 15.0% |
| !! | CTTTATAACAATAAATTTCA+TGG | - | chr2_1:36779060-36779079 | Msa0206800:intron | 15.0% |
| !! | AAATTTACTACAAAGAATAA+GGG | - | chr2_1:36779134-36779153 | Msa0206800:intron | 15.0% |
| !! | TGTTATGAAACTAAAGAAAT+AGG | + | chr2_1:36775049-36775068 | None:intergenic | 20.0% |
| !! | ATACTGAAACTTATAATAGT+TGG | + | chr2_1:36775101-36775120 | None:intergenic | 20.0% |
| !! | AAGTTTCAGTATAAAAGAAA+TGG | - | chr2_1:36775109-36775128 | Msa0206800:three_prime_UTR | 20.0% |
| !! | AAAAAAATGTTGCAATTGTT+GGG | - | chr2_1:36775132-36775151 | Msa0206800:three_prime_UTR | 20.0% |
| !! | ATAATCAATATCAATGACTT+TGG | + | chr2_1:36775426-36775445 | None:intergenic | 20.0% |
| !!! | TCATTGATATTGATTATGTT+GGG | - | chr2_1:36775429-36775448 | Msa0206800:CDS | 20.0% |
| !!! | CTTCTTTTTCTTTTTCATTT+TGG | - | chr2_1:36775599-36775618 | Msa0206800:intron | 20.0% |
| !! | ATACACAAATAAACATGAAA+GGG | + | chr2_1:36775994-36776013 | None:intergenic | 20.0% |
| !! | AATACACAAATAAACATGAA+AGG | + | chr2_1:36775995-36776014 | None:intergenic | 20.0% |
| !! | ATGTTTATTTGTGTATTTGT+TGG | - | chr2_1:36775998-36776017 | Msa0206800:intron | 20.0% |
| !! | AGTTCTCATAAAAACAAAAA+AGG | - | chr2_1:36776114-36776133 | Msa0206800:intron | 20.0% |
| !! | GTTTGAATATTTGTAAATTC+AGG | - | chr2_1:36776160-36776179 | Msa0206800:intron | 20.0% |
| !! | GATCTATATGATATAAGTTT+CGG | + | chr2_1:36776844-36776863 | None:intergenic | 20.0% |
| !!! | TGTTTTAATATCGTTAATCT+TGG | - | chr2_1:36776916-36776935 | Msa0206800:intron | 20.0% |
| !!! | TAGCAAATTTTTATCTATCT+TGG | - | chr2_1:36777144-36777163 | Msa0206800:CDS | 20.0% |
| !! | TTGTTGAAACATATTTGAAA+TGG | - | chr2_1:36777550-36777569 | Msa0206800:intron | 20.0% |
| !!! | ATTTTGTCAAAAAAATGATC+AGG | + | chr2_1:36777657-36777676 | None:intergenic | 20.0% |
| !! | TTGTGATTTCTTTATATTGA+TGG | + | chr2_1:36777691-36777710 | None:intergenic | 20.0% |
| !! | AATGAGATATTCAAATTTGA+TGG | - | chr2_1:36778375-36778394 | Msa0206800:intron | 20.0% |
| !! | AGAGAATTTCAATTCATAAA+AGG | - | chr2_1:36778428-36778447 | Msa0206800:CDS | 20.0% |
| !!! | GACATTAATTTTAAATCAGA+TGG | + | chr2_1:36778529-36778548 | None:intergenic | 20.0% |
| !! | TCTGCCATTAAAAAAATAAA+AGG | - | chr2_1:36778748-36778767 | Msa0206800:intron | 20.0% |
| !! | GAAATTTACTACAAAGAATA+AGG | - | chr2_1:36779133-36779152 | Msa0206800:intron | 20.0% |
| !! | AATATATGGTCATCTAAAAA+AGG | + | chr2_1:36779171-36779190 | None:intergenic | 20.0% |
| !!! | TTTATGATGTGTTAAGTTTT+TGG | - | chr2_1:36779235-36779254 | Msa0206800:intron | 20.0% |
| !! | TATTAGTATTCATTCACTTA+CGG | + | chr2_1:36779631-36779650 | None:intergenic | 20.0% |
| !! | TATAGTAAGTACAAAATAAG+TGG | - | chr2_1:36779705-36779724 | Msa0206800:exon | 20.0% |
| !! | ATAGTAAGTACAAAATAAGT+GGG | - | chr2_1:36779706-36779725 | Msa0206800:exon | 20.0% |
| !!! | TAATTGTTTACACTGATTTT+TGG | - | chr2_1:36779803-36779822 | Msa0206800:five_prime_UTR | 20.0% |
| ! | CATAACATAAACCATATAAG+AGG | - | chr2_1:36775062-36775081 | Msa0206800:three_prime_UTR | 25.0% |
| ! | GAAAAAAATGTTGCAATTGT+TGG | - | chr2_1:36775131-36775150 | Msa0206800:three_prime_UTR | 25.0% |
| ! | AAAAAATGTTGCAATTGTTG+GGG | - | chr2_1:36775133-36775152 | Msa0206800:three_prime_UTR | 25.0% |
| ! | TTGGAATTGAATCTTATGTA+TGG | + | chr2_1:36775407-36775426 | None:intergenic | 25.0% |
| !! | GTCATTGATATTGATTATGT+TGG | - | chr2_1:36775428-36775447 | Msa0206800:CDS | 25.0% |
| !! | CATTGATATTGATTATGTTG+GGG | - | chr2_1:36775430-36775449 | Msa0206800:CDS | 25.0% |
| ! | GAAATTCTTAGTATCTTCTA+CGG | + | chr2_1:36775537-36775556 | None:intergenic | 25.0% |
| ! | CAATTCATATTTACATACCT+CGG | + | chr2_1:36775564-36775583 | None:intergenic | 25.0% |
| ! | AAGAAAAAATCAAATTGCAG+TGG | - | chr2_1:36775696-36775715 | Msa0206800:intron | 25.0% |
| ! | ATTTATTCACGTGTATAGTA+TGG | + | chr2_1:36776047-36776066 | None:intergenic | 25.0% |
| !! | CTTTACCTTTAAAGATTTCT+GGG | + | chr2_1:36776268-36776287 | None:intergenic | 25.0% |
| !! | ACTTTACCTTTAAAGATTTC+TGG | + | chr2_1:36776269-36776288 | None:intergenic | 25.0% |
| ! | AATCAATTTATCACCTCTAT+AGG | - | chr2_1:36776514-36776533 | Msa0206800:intron | 25.0% |
| ! | TTTAATATCGTTAATCTTGG+TGG | - | chr2_1:36776919-36776938 | Msa0206800:intron | 25.0% |
| !! | ATTTTTATCTATCTTGGAGT+TGG | - | chr2_1:36777150-36777169 | Msa0206800:CDS | 25.0% |
| ! | ATTAGTTAGATTCTTCTTAG+GGG | + | chr2_1:36777301-36777320 | None:intergenic | 25.0% |
| !! | GATTAGTTAGATTCTTCTTA+GGG | + | chr2_1:36777302-36777321 | None:intergenic | 25.0% |
| !! | AGATTAGTTAGATTCTTCTT+AGG | + | chr2_1:36777303-36777322 | None:intergenic | 25.0% |
| ! | ATCTTGAAGAAAACTGTAAT+CGG | + | chr2_1:36777607-36777626 | None:intergenic | 25.0% |
| ! | AAAGAAGGTTTAACCATTAA+TGG | - | chr2_1:36777726-36777745 | Msa0206800:intron | 25.0% |
| !!! | ATTGACTTTTCAAGAGAAAA+TGG | - | chr2_1:36777919-36777938 | Msa0206800:intron | 25.0% |
| ! | TCATTTATTTGACATTGACA+TGG | - | chr2_1:36778131-36778150 | Msa0206800:CDS | 25.0% |
| ! | ATGTATGTTACAGTGTTAAA+TGG | - | chr2_1:36778179-36778198 | Msa0206800:CDS | 25.0% |
| !!! | TTTTTGAAAGGATTCCAATT+GGG | + | chr2_1:36778289-36778308 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAAGGATTCCAAT+TGG | + | chr2_1:36778290-36778309 | None:intergenic | 25.0% |
| ! | GAATTTCAATTCATAAAAGG+TGG | - | chr2_1:36778431-36778450 | Msa0206800:CDS | 25.0% |
| ! | TATATATAGACCTACCATAA+AGG | - | chr2_1:36778998-36779017 | Msa0206800:intron | 25.0% |
| ! | ACACATCATAAAATATCATG+TGG | + | chr2_1:36779227-36779246 | None:intergenic | 25.0% |
| ! | AAAAACTCTTCTTTCTTCTA+TGG | + | chr2_1:36779560-36779579 | None:intergenic | 25.0% |
| ! | TTACATCTTCTTGTAATTGT+AGG | - | chr2_1:36779679-36779698 | Msa0206800:CDS | 25.0% |
| ! | TAGTAAGTACAAAATAAGTG+GGG | - | chr2_1:36779707-36779726 | Msa0206800:exon | 25.0% |
| ! | TATATTTATTGCTGCAATTC+TGG | + | chr2_1:36779775-36779794 | None:intergenic | 25.0% |
| AAAGTAGAGAGAAATAGAGA+AGG | + | chr2_1:36775017-36775036 | None:intergenic | 30.0% | |
| ACGCTTAATATCCTCTTATA+TGG | + | chr2_1:36775076-36775095 | None:intergenic | 30.0% | |
| AATTTGTAGAGCATATTTGC+AGG | + | chr2_1:36775180-36775199 | None:intergenic | 30.0% | |
| TGCAAATATGCTCTACAAAT+TGG | - | chr2_1:36775179-36775198 | Msa0206800:three_prime_UTR | 30.0% | |
| ! | TTGTTTGTTAGTTTGGAGTT+TGG | + | chr2_1:36775273-36775292 | None:intergenic | 30.0% |
| ! | TCTTTTATAGAAGAATCCCA+TGG | + | chr2_1:36775317-36775336 | None:intergenic | 30.0% |
| GAATCTTATGTATGGAATGA+TGG | + | chr2_1:36775399-36775418 | None:intergenic | 30.0% | |
| TCATGAAGAAATGAAGTCAT+GGG | - | chr2_1:36775457-36775476 | Msa0206800:CDS | 30.0% | |
| AAATGAAGTCATGGGAATTA+TGG | - | chr2_1:36775465-36775484 | Msa0206800:CDS | 30.0% | |
| AAAAAATCAAATTGCAGTGG+TGG | - | chr2_1:36775699-36775718 | Msa0206800:intron | 30.0% | |
| !! | AAATGTTTCTCTAGCTTTGT+TGG | + | chr2_1:36775843-36775862 | None:intergenic | 30.0% |
| ! | GAAGGTTTAAAACCCTAATT+TGG | - | chr2_1:36775934-36775953 | Msa0206800:intron | 30.0% |
| ! | GTATAGTATGGTTTTCGATA+AGG | + | chr2_1:36776035-36776054 | None:intergenic | 30.0% |
| ! | TTTGTAAATTCAGGTTCACA+AGG | - | chr2_1:36776169-36776188 | Msa0206800:intron | 30.0% |
| AAGTTTGTCATTCTTTGCAT+TGG | - | chr2_1:36776194-36776213 | Msa0206800:intron | 30.0% | |
| AGGTAAAGTTATGCATTCTT+TGG | - | chr2_1:36776280-36776299 | Msa0206800:intron | 30.0% | |
| AACAAGAGAGTTACAATAGT+AGG | - | chr2_1:36776347-36776366 | Msa0206800:intron | 30.0% | |
| CTCTATACACTGTACAATTA+TGG | + | chr2_1:36776439-36776458 | None:intergenic | 30.0% | |
| ! | CTTATATTTCAACCGTTTTG+CGG | - | chr2_1:36776621-36776640 | Msa0206800:intron | 30.0% |
| TAAAACAAGATTGAGGGATT+AGG | + | chr2_1:36777113-36777132 | None:intergenic | 30.0% | |
| GAAGAATCTAACTAATCTCT+AGG | - | chr2_1:36777305-36777324 | Msa0206800:intron | 30.0% | |
| ! | TATTTTATGTTTGCTCACTG+TGG | - | chr2_1:36777365-36777384 | Msa0206800:intron | 30.0% |
| TCTTGAAGAAAACTGTAATC+GGG | + | chr2_1:36777606-36777625 | None:intergenic | 30.0% | |
| ATAAAGGTGACCAAAAACTT+AGG | - | chr2_1:36777796-36777815 | Msa0206800:intron | 30.0% | |
| ! | TGAATATGCTCCTAAGTTTT+TGG | + | chr2_1:36777809-36777828 | None:intergenic | 30.0% |
| GTATATACAAACCTGTAGAT+AGG | + | chr2_1:36777882-36777901 | None:intergenic | 30.0% | |
| TCGACCAATAATTATTTCAC+CGG | - | chr2_1:36777965-36777984 | Msa0206800:intron | 30.0% | |
| AAAATTGCAACATGTACATG+CGG | + | chr2_1:36778112-36778131 | None:intergenic | 30.0% | |
| ! | AATTAGAATCGATTCCCAAT+TGG | - | chr2_1:36778272-36778291 | Msa0206800:CDS | 30.0% |
| TGCTTCTTAACCATCAAATA+TGG | - | chr2_1:36778322-36778341 | Msa0206800:intron | 30.0% | |
| GCTTCTTAACCATCAAATAT+GGG | - | chr2_1:36778323-36778342 | Msa0206800:intron | 30.0% | |
| !! | AATCATTTTTGTTTAAGGGG+TGG | + | chr2_1:36778492-36778511 | None:intergenic | 30.0% |
| GTTAAGTAGATATAACGGTT+TGG | + | chr2_1:36778567-36778586 | None:intergenic | 30.0% | |
| ! | CGTTTTTCTTGTCCTATTTT+CGG | - | chr2_1:36778690-36778709 | Msa0206800:intron | 30.0% |
| AGAGATGATACAAGAGTAAA+AGG | + | chr2_1:36778727-36778746 | None:intergenic | 30.0% | |
| GTCTTAAAATCCTTTATGGT+AGG | + | chr2_1:36779011-36779030 | None:intergenic | 30.0% | |
| CATCTAAAAAAGGTTAAGGA+CGG | + | chr2_1:36779161-36779180 | None:intergenic | 30.0% | |
| TGGTCATCTAAAAAAGGTTA+AGG | + | chr2_1:36779165-36779184 | None:intergenic | 30.0% | |
| ATTCCACAATTGGCAATAAT+AGG | - | chr2_1:36779309-36779328 | Msa0206800:CDS | 30.0% | |
| TATCCTATTATTGCCAATTG+TGG | + | chr2_1:36779315-36779334 | None:intergenic | 30.0% | |
| CTAATGAAATGAGATGTCAA+TGG | - | chr2_1:36779361-36779380 | Msa0206800:CDS | 30.0% | |
| TGGAAAATGATGTGAAAATG+TGG | - | chr2_1:36779433-36779452 | Msa0206800:CDS | 30.0% | |
| GGAAAATGATGTGAAAATGT+GGG | - | chr2_1:36779434-36779453 | Msa0206800:CDS | 30.0% | |
| GCTATTTGCAGTAATATTGA+TGG | + | chr2_1:36779750-36779769 | None:intergenic | 30.0% | |
| !! | GTAACTATGTTTTAAACCAG+CGG | + | chr2_1:36779836-36779855 | None:intergenic | 30.0% |
| TCATCAGATTCGTAGACAAT+TGG | + | chr2_1:36775212-36775231 | None:intergenic | 35.0% | |
| ATTGTCTACGAATCTGATGA+TGG | - | chr2_1:36775212-36775231 | Msa0206800:CDS | 35.0% | |
| !! | GGAAGTCTTGTTTGTTAGTT+TGG | + | chr2_1:36775280-36775299 | None:intergenic | 35.0% |
| ! | TCCAGTTTACAGATTTTCCA+TGG | - | chr2_1:36775297-36775316 | Msa0206800:CDS | 35.0% |
| ! | CCAGTTTACAGATTTTCCAT+GGG | - | chr2_1:36775298-36775317 | Msa0206800:CDS | 35.0% |
| GATGGAAAAATGTTGAGCAT+AGG | + | chr2_1:36775381-36775400 | None:intergenic | 35.0% | |
| CTCATGAAGAAATGAAGTCA+TGG | - | chr2_1:36775456-36775475 | Msa0206800:CDS | 35.0% | |
| TTCATATTTACATACCTCGG+TGG | + | chr2_1:36775561-36775580 | None:intergenic | 35.0% | |
| TCTTAAACCTCCAAACATGT+TGG | + | chr2_1:36775754-36775773 | None:intergenic | 35.0% | |
| !! | AGCTTTGTTGGTTAGAAAGA+AGG | + | chr2_1:36775831-36775850 | None:intergenic | 35.0% |
| GCTAGAGAAACATTTGTAGT+TGG | - | chr2_1:36775848-36775867 | Msa0206800:intron | 35.0% | |
| AAACCCTAATTTGGATTGCT+TGG | - | chr2_1:36775943-36775962 | Msa0206800:intron | 35.0% | |
| ! | CTTTGCATTGGAAAGTATAG+TGG | - | chr2_1:36776206-36776225 | Msa0206800:intron | 35.0% |
| AAAGGCCCAGAAATCTTTAA+AGG | - | chr2_1:36776260-36776279 | Msa0206800:intron | 35.0% | |
| GTTCTTTGGATAATTGTGCA+AGG | + | chr2_1:36776550-36776569 | None:intergenic | 35.0% | |
| TTATCCAAAGAACTACACAC+TGG | - | chr2_1:36776557-36776576 | Msa0206800:intron | 35.0% | |
| !! | TCTTCCAGATTTTGACATTG+CGG | - | chr2_1:36776582-36776601 | Msa0206800:intron | 35.0% |
| TACCAATGGTGAAAGTAAAG+TGG | + | chr2_1:36776695-36776714 | None:intergenic | 35.0% | |
| GTAGGAATAGATCTTACCAA+TGG | + | chr2_1:36776709-36776728 | None:intergenic | 35.0% | |
| CTTAGTGTTCGAAAGAATGT+AGG | + | chr2_1:36776727-36776746 | None:intergenic | 35.0% | |
| TTTCTTAGACTCACCAATCA+AGG | - | chr2_1:36776884-36776903 | Msa0206800:intron | 35.0% | |
| TTCTTAGACTCACCAATCAA+GGG | - | chr2_1:36776885-36776904 | Msa0206800:intron | 35.0% | |
| GTAACATTACATCGCTGTAT+TGG | - | chr2_1:36777072-36777091 | Msa0206800:CDS | 35.0% | |
| !!! | TGTATTGGTTCGTAGGATTT+TGG | - | chr2_1:36777087-36777106 | Msa0206800:CDS | 35.0% |
| ATATGGGATCTCAAACTAGT+TGG | - | chr2_1:36777393-36777412 | Msa0206800:intron | 35.0% | |
| TGAAGCAATAGAATAGAGGA+AGG | + | chr2_1:36777424-36777443 | None:intergenic | 35.0% | |
| ATGCTGAAGCAATAGAATAG+AGG | + | chr2_1:36777428-36777447 | None:intergenic | 35.0% | |
| AATAACTAGGTCAGCTTCTT+GGG | + | chr2_1:36777763-36777782 | None:intergenic | 35.0% | |
| CGACCAATAATTATTTCACC+GGG | - | chr2_1:36777966-36777985 | Msa0206800:intron | 35.0% | |
| TCAAAGAACTTCACCAAAAG+AGG | + | chr2_1:36778018-36778037 | None:intergenic | 35.0% | |
| AAATTGCAACATGTACATGC+GGG | + | chr2_1:36778111-36778130 | None:intergenic | 35.0% | |
| AGGAAATTTGACTATGGTGT+TGG | + | chr2_1:36778240-36778259 | None:intergenic | 35.0% | |
| ! | CTCTCTAGGAAATTTGACTA+TGG | + | chr2_1:36778246-36778265 | None:intergenic | 35.0% |
| CATAGTCAAATTTCCTAGAG+AGG | - | chr2_1:36778244-36778263 | Msa0206800:CDS | 35.0% | |
| TTCTAATTCTACTCCTCTCT+AGG | + | chr2_1:36778260-36778279 | None:intergenic | 35.0% | |
| ATTGTCTCTCCCATATTTGA+TGG | + | chr2_1:36778335-36778354 | None:intergenic | 35.0% | |
| ! | TTTCTTGTCCTATTTTCGGA+TGG | - | chr2_1:36778694-36778713 | Msa0206800:intron | 35.0% |
| GGTCGTCTTAAAATCCTTTA+TGG | + | chr2_1:36779015-36779034 | None:intergenic | 35.0% | |
| ATGTCAATTGTACTGTATCC+AGG | - | chr2_1:36779268-36779287 | Msa0206800:intron | 35.0% | |
| ! | TTTTCCATCTCTCTTATGCT+AGG | + | chr2_1:36779420-36779439 | None:intergenic | 35.0% |
| TAAGTACAAAATAAGTGGGG+TGG | - | chr2_1:36779710-36779729 | Msa0206800:exon | 35.0% | |
| AAGTACAAAATAAGTGGGGT+GGG | - | chr2_1:36779711-36779730 | Msa0206800:exon | 35.0% | |
| !! | TACGAATCTGATGATGGCAT+TGG | - | chr2_1:36775218-36775237 | Msa0206800:CDS | 40.0% |
| !! | ATGATGGCATTGGTGGAATA+TGG | - | chr2_1:36775228-36775247 | Msa0206800:CDS | 40.0% |
| CCCATGGAAAATCTGTAAAC+TGG | + | chr2_1:36775301-36775320 | None:intergenic | 40.0% | |
| ! | TCTTGCACTTGTTGATTGCT+TGG | + | chr2_1:36775347-36775366 | None:intergenic | 40.0% |
| AAGTCATGGGAATTATGGAG+TGG | - | chr2_1:36775470-36775489 | Msa0206800:CDS | 40.0% | |
| TGGGAATTATGGAGTGGTAA+TGG | - | chr2_1:36775476-36775495 | Msa0206800:CDS | 40.0% | |
| !! | AGTGGTAATGGAAGTCCATT+TGG | - | chr2_1:36775488-36775507 | Msa0206800:CDS | 40.0% |
| !! | TGGAAGTCCATTTGGTTCTA+AGG | - | chr2_1:36775496-36775515 | Msa0206800:CDS | 40.0% |
| !! | GGAAGTCCATTTGGTTCTAA+GGG | - | chr2_1:36775497-36775516 | Msa0206800:CDS | 40.0% |
| CAAGTTCCCTTAGAACCAAA+TGG | + | chr2_1:36775506-36775525 | None:intergenic | 40.0% | |
| !! | CATTTGGTTCTAAGGGAACT+TGG | - | chr2_1:36775504-36775523 | Msa0206800:CDS | 40.0% |
| TACTAAGAATTTCACCACCG+AGG | - | chr2_1:36775544-36775563 | Msa0206800:intron | 40.0% | |
| CAGTGGTGGTTAGAACTATT+CGG | - | chr2_1:36775713-36775732 | Msa0206800:intron | 40.0% | |
| TAGAACTATTCGGACTCACA+TGG | - | chr2_1:36775723-36775742 | Msa0206800:intron | 40.0% | |
| AGGGGGAACTTAGGAATATT+TGG | + | chr2_1:36776236-36776255 | None:intergenic | 40.0% | |
| AATATTCCTAAGTTCCCCCT+TGG | - | chr2_1:36776236-36776255 | Msa0206800:intron | 40.0% | |
| AGAGTTACAATAGTAGGCTC+AGG | - | chr2_1:36776353-36776372 | Msa0206800:intron | 40.0% | |
| GAGTTACAATAGTAGGCTCA+GGG | - | chr2_1:36776354-36776373 | Msa0206800:intron | 40.0% | |
| GCTGAATGTGCAAATGCAAA+TGG | - | chr2_1:36776398-36776417 | Msa0206800:intron | 40.0% | |
| GAAACCAGTGTGTAGTTCTT+TGG | + | chr2_1:36776564-36776583 | None:intergenic | 40.0% | |
| !! | CTTCCAGATTTTGACATTGC+GGG | - | chr2_1:36776583-36776602 | Msa0206800:intron | 40.0% |
| AACAACGCATAACCCTTGAT+TGG | + | chr2_1:36776900-36776919 | None:intergenic | 40.0% | |
| TGCTCACTGTGGTTGTTATA+TGG | - | chr2_1:36777376-36777395 | Msa0206800:intron | 40.0% | |
| GCTCACTGTGGTTGTTATAT+GGG | - | chr2_1:36777377-36777396 | Msa0206800:intron | 40.0% | |
| ATATCTCTACATGTCGAGCT+GGG | - | chr2_1:36777625-36777644 | Msa0206800:intron | 40.0% | |
| ! | AGCTTTAGCTTCTGCAAAGA+AGG | - | chr2_1:36777711-36777730 | Msa0206800:intron | 40.0% |
| GGGCTTATCTTCTCCATTAA+TGG | + | chr2_1:36777742-36777761 | None:intergenic | 40.0% | |
| ATAACTAGGTCAGCTTCTTG+GGG | + | chr2_1:36777762-36777781 | None:intergenic | 40.0% | |
| GAATAACTAGGTCAGCTTCT+TGG | + | chr2_1:36777764-36777783 | None:intergenic | 40.0% | |
| TGACCTAGTTATTCTTGCCA+CGG | - | chr2_1:36777770-36777789 | Msa0206800:intron | 40.0% | |
| ATTCTTGCCACGGGATATAA+AGG | - | chr2_1:36777780-36777799 | Msa0206800:intron | 40.0% | |
| CGACCCGGTGAAATAATTAT+TGG | + | chr2_1:36777972-36777991 | None:intergenic | 40.0% | |
| ATTATTTCACCGGGTCGAAA+TGG | - | chr2_1:36777975-36777994 | Msa0206800:intron | 40.0% | |
| TTATTTCACCGGGTCGAAAT+GGG | - | chr2_1:36777976-36777995 | Msa0206800:intron | 40.0% | |
| ! | CTTCCAAACGATTCCTCTTT+TGG | - | chr2_1:36778002-36778021 | Msa0206800:intron | 40.0% |
| TCACCAAAAGAGGAATCGTT+TGG | + | chr2_1:36778008-36778027 | None:intergenic | 40.0% | |
| TTTGACATTGACATGGCAAG+CGG | - | chr2_1:36778138-36778157 | Msa0206800:CDS | 40.0% | |
| !! | TGACTATGGTGTTGGTGAAA+CGG | + | chr2_1:36778232-36778251 | None:intergenic | 40.0% |
| GAGTACTACCATCCGAAAAT+AGG | + | chr2_1:36778705-36778724 | None:intergenic | 40.0% | |
| GTGGGTGTGCATCTAATATA+TGG | + | chr2_1:36779185-36779204 | None:intergenic | 40.0% | |
| TTGCCAATTGTGGAATTCGA+GGG | + | chr2_1:36779305-36779324 | None:intergenic | 40.0% | |
| ATTGCCAATTGTGGAATTCG+AGG | + | chr2_1:36779306-36779325 | None:intergenic | 40.0% | |
| TGAAATGAGATGTCAATGGC+TGG | - | chr2_1:36779365-36779384 | Msa0206800:CDS | 40.0% | |
| ACTTCCTAGCATAAGAGAGA+TGG | - | chr2_1:36779413-36779432 | Msa0206800:CDS | 40.0% | |
| TGAAAATGTGGGAAGAGAAC+AGG | - | chr2_1:36779445-36779464 | Msa0206800:CDS | 40.0% | |
| TCAAGATCATGCATTACGTG+TGG | - | chr2_1:36779492-36779511 | Msa0206800:CDS | 40.0% | |
| CAAGATCATGCATTACGTGT+GGG | - | chr2_1:36779493-36779512 | Msa0206800:CDS | 40.0% | |
| GCTGAGCTATTTGAACCATA+TGG | - | chr2_1:36779582-36779601 | Msa0206800:CDS | 40.0% | |
| ACAAGCCATTGAAATCAGTG+GGG | + | chr2_1:36779608-36779627 | None:intergenic | 40.0% | |
| GACAAGCCATTGAAATCAGT+GGG | + | chr2_1:36779609-36779628 | None:intergenic | 40.0% | |
| AGTACAAAATAAGTGGGGTG+GGG | - | chr2_1:36779712-36779731 | Msa0206800:exon | 40.0% | |
| !!! | GATTTTTGGTAAACAACCGC+TGG | - | chr2_1:36779817-36779836 | Msa0206800:five_prime_UTR | 40.0% |
| AATGTTGCAATTGTTGGGGC+AGG | - | chr2_1:36775137-36775156 | Msa0206800:three_prime_UTR | 45.0% | |
| ATTGTTGGGGCAGGAATAAG+TGG | - | chr2_1:36775146-36775165 | Msa0206800:three_prime_UTR | 45.0% | |
| !! | GAATCTGATGATGGCATTGG+TGG | - | chr2_1:36775221-36775240 | Msa0206800:CDS | 45.0% |
| AACCTCCAAACATGTTGGAC+CGG | + | chr2_1:36775749-36775768 | None:intergenic | 45.0% | |
| GGGCCAAGCAATCCAAATTA+GGG | + | chr2_1:36775949-36775968 | None:intergenic | 45.0% | |
| TGAAAGGGATGCCGTGTTAT+GGG | + | chr2_1:36775979-36775998 | None:intergenic | 45.0% | |
| ATGAAAGGGATGCCGTGTTA+TGG | + | chr2_1:36775980-36775999 | None:intergenic | 45.0% | |
| !! | ATTTCTGGGCCTTTTCCAAG+GGG | + | chr2_1:36776254-36776273 | None:intergenic | 45.0% |
| !! | GATTTCTGGGCCTTTTCCAA+GGG | + | chr2_1:36776255-36776274 | None:intergenic | 45.0% |
| !! | AGATTTCTGGGCCTTTTCCA+AGG | + | chr2_1:36776256-36776275 | None:intergenic | 45.0% |
| !! | AGCTGCAGTCTTGTTGTCTA+AGG | + | chr2_1:36776315-36776334 | None:intergenic | 45.0% |
| AGGATGAGTGACTCCTATAG+AGG | + | chr2_1:36776530-36776549 | None:intergenic | 45.0% | |
| ATGCCCGCAATGTCAAAATC+TGG | + | chr2_1:36776589-36776608 | None:intergenic | 45.0% | |
| GACATTGCGGGCATTAATCT+TGG | - | chr2_1:36776595-36776614 | Msa0206800:intron | 45.0% | |
| GTACCAAAAGCTCCGCAAAA+CGG | + | chr2_1:36776636-36776655 | None:intergenic | 45.0% | |
| CTAAGTAGGAATGGTTCTCC+AGG | + | chr2_1:36776664-36776683 | None:intergenic | 45.0% | |
| !! | ACCATTCCTACTTAGCCTTG+TGG | - | chr2_1:36776669-36776688 | Msa0206800:intron | 45.0% |
| GTGAAAGTAAAGTGGCCACA+AGG | + | chr2_1:36776687-36776706 | None:intergenic | 45.0% | |
| ! | GGCCACTTTACTTTCACCAT+TGG | - | chr2_1:36776690-36776709 | Msa0206800:intron | 45.0% |
| !! | ACATCGCTGTATTGGTTCGT+AGG | - | chr2_1:36777080-36777099 | Msa0206800:CDS | 45.0% |
| AAGCTGCCACTGAAGAAGTA+CGG | - | chr2_1:36777573-36777592 | Msa0206800:intron | 45.0% | |
| GATATCTCTACATGTCGAGC+TGG | - | chr2_1:36777624-36777643 | Msa0206800:intron | 45.0% | |
| TATCTCTACATGTCGAGCTG+GGG | - | chr2_1:36777626-36777645 | Msa0206800:intron | 45.0% | |
| GACCTAGTTATTCTTGCCAC+GGG | - | chr2_1:36777771-36777790 | Msa0206800:intron | 45.0% | |
| ATCCCGTGGCAAGAATAACT+AGG | + | chr2_1:36777776-36777795 | None:intergenic | 45.0% | |
| TTGGTCACCTTTATATCCCG+TGG | + | chr2_1:36777790-36777809 | None:intergenic | 45.0% | |
| CAACGAATCTGCAGACTCAA+CGG | - | chr2_1:36777854-36777873 | Msa0206800:intron | 45.0% | |
| ACTCAACGGTTCCTATCTAC+AGG | - | chr2_1:36777868-36777887 | Msa0206800:intron | 45.0% | |
| GGATAAACATGCACGTGAGT+TGG | + | chr2_1:36778209-36778228 | None:intergenic | 45.0% | |
| !! | ACTATGGTGTTGGTGAAACG+GGG | + | chr2_1:36778230-36778249 | None:intergenic | 45.0% |
| !! | GACTATGGTGTTGGTGAAAC+GGG | + | chr2_1:36778231-36778250 | None:intergenic | 45.0% |
| ACACACACACACACAATGGT+AGG | + | chr2_1:36778945-36778964 | None:intergenic | 45.0% | |
| ACACACACACACACACACAA+TGG | + | chr2_1:36778949-36778968 | None:intergenic | 45.0% | |
| TCGAGGGTGAATTATTTGCC+TGG | + | chr2_1:36779289-36779308 | None:intergenic | 45.0% | |
| TCACCCTCGAATTCCACAAT+TGG | - | chr2_1:36779299-36779318 | Msa0206800:CDS | 45.0% | |
| CATGCATTACGTGTGGGATA+TGG | - | chr2_1:36779499-36779518 | Msa0206800:CDS | 45.0% | |
| TTGAAATCAGTGGGGCCATA+TGG | + | chr2_1:36779600-36779619 | None:intergenic | 45.0% | |
| !! | TATGGCCCCACTGATTTCAA+TGG | - | chr2_1:36779600-36779619 | Msa0206800:CDS | 45.0% |
| GGACAAGCCATTGAAATCAG+TGG | + | chr2_1:36779610-36779629 | None:intergenic | 45.0% | |
| !!! | ATTTTTTCATTTATTTTATA+AGG | + | chr2_1:36775794-36775813 | None:intergenic | 5.0% |
| ACTATTCGGACTCACATGGC+CGG | - | chr2_1:36775727-36775746 | Msa0206800:intron | 50.0% | |
| GGGGCCAAGCAATCCAAATT+AGG | + | chr2_1:36775950-36775969 | None:intergenic | 50.0% | |
| TGCCGTGTTATGGGTTCGTT+GGG | + | chr2_1:36775970-36775989 | None:intergenic | 50.0% | |
| ATGCCGTGTTATGGGTTCGT+TGG | + | chr2_1:36775971-36775990 | None:intergenic | 50.0% | |
| ! | CCTTTTCCAAGGGGGAACTT+AGG | + | chr2_1:36776245-36776264 | None:intergenic | 50.0% |
| CCTAAGTTCCCCCTTGGAAA+AGG | - | chr2_1:36776242-36776261 | Msa0206800:intron | 50.0% | |
| ! | TTTCTGGGCCTTTTCCAAGG+GGG | + | chr2_1:36776253-36776272 | None:intergenic | 50.0% |
| ! | CAACCGTTTTGCGGAGCTTT+TGG | - | chr2_1:36776630-36776649 | Msa0206800:intron | 50.0% |
| ! | GAGCTTTTGGTACACAAGCC+TGG | - | chr2_1:36776643-36776662 | Msa0206800:intron | 50.0% |
| GCCACAAGGCTAAGTAGGAA+TGG | + | chr2_1:36776673-36776692 | None:intergenic | 50.0% | |
| AAGTGGCCACAAGGCTAAGT+AGG | + | chr2_1:36776678-36776697 | None:intergenic | 50.0% | |
| ! | AGCTGCCACTGAAGAAGTAC+GGG | - | chr2_1:36777574-36777593 | Msa0206800:intron | 50.0% |
| GGAAGAATCCCATTTCGACC+CGG | + | chr2_1:36777987-36778006 | None:intergenic | 50.0% | |
| ! | TCAATGGCTGGCGCATCTTT+TGG | - | chr2_1:36779377-36779396 | Msa0206800:CDS | 50.0% |
| ACAAAATAAGTGGGGTGGGG+TGG | - | chr2_1:36779715-36779734 | Msa0206800:five_prime_UTR | 50.0% | |
| CAAAATAAGTGGGGTGGGGT+GGG | - | chr2_1:36779716-36779735 | Msa0206800:five_prime_UTR | 50.0% | |
| AAAATAAGTGGGGTGGGGTG+GGG | - | chr2_1:36779717-36779736 | Msa0206800:five_prime_UTR | 50.0% | |
| CATGGCCGGTCCAACATGTT+TGG | - | chr2_1:36775741-36775760 | Msa0206800:intron | 55.0% | |
| GCCCCAACGAACCCATAACA+CGG | - | chr2_1:36775965-36775984 | Msa0206800:intron | 55.0% | |
| GCCGTGTTATGGGTTCGTTG+GGG | + | chr2_1:36775969-36775988 | None:intergenic | 55.0% | |
| ACCAGCCCGTACTTCTTCAG+TGG | + | chr2_1:36777582-36777601 | None:intergenic | 55.0% | |
| AAATAAGTGGGGTGGGGTGG+GGG | - | chr2_1:36779718-36779737 | Msa0206800:five_prime_UTR | 55.0% | |
| GGCCGGTCCAACATGTTTGG+AGG | - | chr2_1:36775744-36775763 | Msa0206800:intron | 60.0% | |
| ! | GCCACTGAAGAAGTACGGGC+TGG | - | chr2_1:36777578-36777597 | Msa0206800:intron | 60.0% |
| AATAAGTGGGGTGGGGTGGG+GGG | - | chr2_1:36779719-36779738 | Msa0206800:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 36774980 | 36779860 | 36774980 | ID=Msa0206800;Name=Msa0206800 |
| chr2_1 | mRNA | 36774980 | 36779860 | 36774980 | ID=Msa0206800-mRNA-1;Parent=Msa0206800;Name=Msa0206800-mRNA-1;_AED=0.05;_eAED=0.05;_QI=148|1|1|1|1|1|5|219|520 |
| chr2_1 | exon | 36774980 | 36775550 | 36774980 | ID=Msa0206800-mRNA-1:exon:11948;Parent=Msa0206800-mRNA-1 |
| chr2_1 | exon | 36776951 | 36777309 | 36776951 | ID=Msa0206800-mRNA-1:exon:11947;Parent=Msa0206800-mRNA-1 |
| chr2_1 | exon | 36778129 | 36778304 | 36778129 | ID=Msa0206800-mRNA-1:exon:11946;Parent=Msa0206800-mRNA-1 |
| chr2_1 | exon | 36778421 | 36778658 | 36778421 | ID=Msa0206800-mRNA-1:exon:11945;Parent=Msa0206800-mRNA-1 |
| chr2_1 | exon | 36779275 | 36779860 | 36779275 | ID=Msa0206800-mRNA-1:exon:11944;Parent=Msa0206800-mRNA-1 |
| chr2_1 | five_prime_UTR | 36779713 | 36779860 | 36779713 | ID=Msa0206800-mRNA-1:five_prime_utr;Parent=Msa0206800-mRNA-1 |
| chr2_1 | CDS | 36779275 | 36779712 | 36779275 | ID=Msa0206800-mRNA-1:cds;Parent=Msa0206800-mRNA-1 |
| chr2_1 | CDS | 36778421 | 36778658 | 36778421 | ID=Msa0206800-mRNA-1:cds;Parent=Msa0206800-mRNA-1 |
| chr2_1 | CDS | 36778129 | 36778304 | 36778129 | ID=Msa0206800-mRNA-1:cds;Parent=Msa0206800-mRNA-1 |
| chr2_1 | CDS | 36776951 | 36777309 | 36776951 | ID=Msa0206800-mRNA-1:cds;Parent=Msa0206800-mRNA-1 |
| chr2_1 | CDS | 36775199 | 36775550 | 36775199 | ID=Msa0206800-mRNA-1:cds;Parent=Msa0206800-mRNA-1 |
| chr2_1 | three_prime_UTR | 36774980 | 36775198 | 36774980 | ID=Msa0206800-mRNA-1:three_prime_utr;Parent=Msa0206800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
