Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575740 | AEL30895.1 | 96.104 | 385 | 5 | 5 | 1 | 377 | 1 | 383 | 0.0 | 753 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575740 | sp|Q6X7K0|WOX1_ARATH | 36.296 | 405 | 175 | 14 | 1 | 377 | 1 | 350 | 1.68e-60 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575740 | G0ZGT6 | 96.104 | 385 | 5 | 5 | 1 | 377 | 1 | 383 | 0.0 | 753 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0575740 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006980 | Msa0575740 | 0.808679 | 2.750840e-50 | -8.615850e-47 |
| Msa0015710 | Msa0575740 | 0.800186 | 1.622173e-48 | -8.615850e-47 |
| Msa0019600 | Msa0575740 | 0.827253 | 1.732407e-54 | -8.615850e-47 |
| Msa0050040 | Msa0575740 | 0.823374 | 1.433902e-53 | -8.615850e-47 |
| Msa0062440 | Msa0575740 | 0.810122 | 1.348641e-50 | -8.615850e-47 |
| Msa0080990 | Msa0575740 | 0.817284 | 3.572024e-52 | -8.615850e-47 |
| Msa0084500 | Msa0575740 | 0.810153 | 1.327639e-50 | -8.615850e-47 |
| Msa0102990 | Msa0575740 | 0.824265 | 8.862751e-54 | -8.615850e-47 |
| Msa0104500 | Msa0575740 | 0.822266 | 2.597093e-53 | -8.615850e-47 |
| Msa0111750 | Msa0575740 | 0.819032 | 1.436961e-52 | -8.615850e-47 |
| Msa0124130 | Msa0575740 | 0.839892 | 1.207229e-57 | -8.615850e-47 |
| Msa0147600 | Msa0575740 | 0.814968 | 1.175784e-51 | -8.615850e-47 |
| Msa0149140 | Msa0575740 | 0.833188 | 6.154894e-56 | -8.615850e-47 |
| Msa0152480 | Msa0575740 | 0.841712 | 4.024593e-58 | -8.615850e-47 |
| Msa0152500 | Msa0575740 | 0.833188 | 6.154631e-56 | -8.615850e-47 |
| Msa0156250 | Msa0575740 | 0.815631 | 8.374909e-52 | -8.615850e-47 |
| Msa0176470 | Msa0575740 | 0.817263 | 3.610200e-52 | -8.615850e-47 |
| Msa0191040 | Msa0575740 | 0.812412 | 4.296022e-51 | -8.615850e-47 |
| Msa0194380 | Msa0575740 | 0.835664 | 1.471122e-56 | -8.615850e-47 |
| Msa0203030 | Msa0575740 | 0.825270 | 5.138207e-54 | -8.615850e-47 |
| Msa0206800 | Msa0575740 | 0.824995 | 5.967388e-54 | -8.615850e-47 |
| Msa0212080 | Msa0575740 | 0.814045 | 1.881409e-51 | -8.615850e-47 |
| Msa0212150 | Msa0575740 | 0.838224 | 3.265540e-57 | -8.615850e-47 |
| Msa0219190 | Msa0575740 | 0.853197 | 2.801365e-61 | -8.615850e-47 |
| Msa0233340 | Msa0575740 | 0.812148 | 4.903716e-51 | -8.615850e-47 |
| Msa0236110 | Msa0575740 | 0.844001 | 9.906521e-59 | -8.615850e-47 |
| Msa0373960 | Msa0575740 | 0.851112 | 1.097178e-60 | -8.615850e-47 |
| Msa0382010 | Msa0575740 | 0.825779 | 3.891693e-54 | -8.615850e-47 |
| Msa0392420 | Msa0575740 | 0.821754 | 3.411972e-53 | -8.615850e-47 |
| Msa0392460 | Msa0575740 | 0.814150 | 1.783939e-51 | -8.615850e-47 |
| Msa0392490 | Msa0575740 | 0.825047 | 5.799709e-54 | -8.615850e-47 |
| Msa0406000 | Msa0575740 | 0.869882 | 2.219595e-66 | -8.615850e-47 |
| Msa0418200 | Msa0575740 | 0.808354 | 3.227004e-50 | -8.615850e-47 |
| Msa0423100 | Msa0575740 | 0.860593 | 1.853264e-63 | -8.615850e-47 |
| Msa0424330 | Msa0575740 | 0.836906 | 7.108356e-57 | -8.615850e-47 |
| Msa0424340 | Msa0575740 | 0.843294 | 1.530389e-58 | -8.615850e-47 |
| Msa0436500 | Msa0575740 | 0.819194 | 1.319788e-52 | -8.615850e-47 |
| Msa0441590 | Msa0575740 | 0.827822 | 1.265009e-54 | -8.615850e-47 |
| Msa0451400 | Msa0575740 | 0.880350 | 5.903681e-70 | -8.615850e-47 |
| Msa0464540 | Msa0575740 | 0.821114 | 4.794786e-53 | -8.615850e-47 |
| Msa0469260 | Msa0575740 | 0.845218 | 4.657748e-59 | -8.615850e-47 |
| Msa0476590 | Msa0575740 | 0.805685 | 1.184573e-49 | -8.615850e-47 |
| Msa0242540 | Msa0575740 | 0.810673 | 1.025624e-50 | -8.615850e-47 |
| Msa0252630 | Msa0575740 | 0.843416 | 1.420448e-58 | -8.615850e-47 |
| Msa0252770 | Msa0575740 | 0.832415 | 9.579414e-56 | -8.615850e-47 |
| Msa0273990 | Msa0575740 | 0.836679 | 8.125305e-57 | -8.615850e-47 |
| Msa0277290 | Msa0575740 | 0.821281 | 4.388352e-53 | -8.615850e-47 |
| Msa0280750 | Msa0575740 | 0.813672 | 2.273341e-51 | -8.615850e-47 |
| Msa0288190 | Msa0575740 | 0.815518 | 8.872313e-52 | -8.615850e-47 |
| Msa0288200 | Msa0575740 | 0.819874 | 9.237167e-53 | -8.615850e-47 |
| Msa0289920 | Msa0575740 | 0.817502 | 3.189265e-52 | -8.615850e-47 |
| Msa0291330 | Msa0575740 | 0.823866 | 1.099908e-53 | -8.615850e-47 |
| Msa0298240 | Msa0575740 | 0.851494 | 8.557897e-61 | -8.615850e-47 |
| Msa0306120 | Msa0575740 | 0.826746 | 2.290867e-54 | -8.615850e-47 |
| Msa0311690 | Msa0575740 | 0.812991 | 3.208910e-51 | -8.615850e-47 |
| Msa0314630 | Msa0575740 | 0.851692 | 7.521679e-61 | -8.615850e-47 |
| Msa0322830 | Msa0575740 | 0.828483 | 8.769759e-55 | -8.615850e-47 |
| Msa0322840 | Msa0575740 | 0.834612 | 2.710993e-56 | -8.615850e-47 |
| Msa0322860 | Msa0575740 | 0.840618 | 7.801616e-58 | -8.615850e-47 |
| Msa0326540 | Msa0575740 | 0.830485 | 2.860323e-55 | -8.615850e-47 |
| Msa0329620 | Msa0575740 | 0.859521 | 3.904042e-63 | -8.615850e-47 |
| Msa0331540 | Msa0575740 | 0.802462 | 5.547742e-49 | -8.615850e-47 |
| Msa0344570 | Msa0575740 | 0.817337 | 3.475406e-52 | -8.615850e-47 |
| Msa0351770 | Msa0575740 | 0.846400 | 2.224672e-59 | -8.615850e-47 |
| Msa0359250 | Msa0575740 | 0.885712 | 6.416128e-72 | -8.615850e-47 |
| Msa0487570 | Msa0575740 | 0.826477 | 2.655279e-54 | -8.615850e-47 |
| Msa0487630 | Msa0575740 | 0.823331 | 1.467269e-53 | -8.615850e-47 |
| Msa0492190 | Msa0575740 | 0.859707 | 3.433996e-63 | -8.615850e-47 |
| Msa0515950 | Msa0575740 | 0.842062 | 3.252296e-58 | -8.615850e-47 |
| Msa0520510 | Msa0575740 | 0.817013 | 4.110197e-52 | -8.615850e-47 |
| Msa0533080 | Msa0575740 | 0.839290 | 1.731344e-57 | -8.615850e-47 |
| Msa0534930 | Msa0575740 | 0.854977 | 8.591131e-62 | -8.615850e-47 |
| Msa0535040 | Msa0575740 | 0.826285 | 2.950253e-54 | -8.615850e-47 |
| Msa0575740 | Msa0591790 | 0.847343 | 1.228243e-59 | -8.615850e-47 |
| Msa0575740 | Msa0591800 | 0.835035 | 2.120850e-56 | -8.615850e-47 |
| Msa0575740 | Msa0594090 | 0.818484 | 1.913200e-52 | -8.615850e-47 |
| Msa0575740 | Msa0625890 | 0.808368 | 3.205136e-50 | -8.615850e-47 |
| Msa0575740 | Msa0641250 | 0.802712 | 4.926476e-49 | -8.615850e-47 |
| Msa0575740 | Msa0663680 | 0.818658 | 1.747288e-52 | -8.615850e-47 |
| Msa0575740 | Msa0667850 | 0.814170 | 1.765970e-51 | -8.615850e-47 |
| Msa0575740 | Msa0669840 | 0.866060 | 3.757126e-65 | -8.615850e-47 |
| Msa0575740 | Msa0707220 | 0.818343 | 2.059507e-52 | -8.615850e-47 |
| Msa0575740 | Msa0725860 | 0.823174 | 1.596247e-53 | -8.615850e-47 |
| Msa0575740 | Msa0739580 | 0.831124 | 1.993495e-55 | -8.615850e-47 |
| Msa0575740 | Msa0741900 | 0.806147 | 9.474799e-50 | -8.615850e-47 |
| Msa0575740 | Msa0742180 | 0.832988 | 6.901160e-56 | -8.615850e-47 |
| Msa0575740 | Msa0748000 | 0.814860 | 1.242243e-51 | -8.615850e-47 |
| Msa0575740 | Msa0752840 | 0.816046 | 6.765976e-52 | -8.615850e-47 |
| Msa0575740 | Msa0764820 | 0.801222 | 9.971132e-49 | -8.615850e-47 |
| Msa0575740 | Msa0786040 | 0.823448 | 1.378023e-53 | -8.615850e-47 |
| Msa0575740 | Msa0823400 | 0.858589 | 7.425916e-63 | -8.615850e-47 |
| Msa0575740 | Msa0828830 | 0.812736 | 3.648860e-51 | -8.615850e-47 |
| Msa0575740 | Msa0831940 | 0.804537 | 2.059826e-49 | -8.615850e-47 |
| Msa0575740 | Msa0851020 | 0.800037 | 1.738702e-48 | -8.615850e-47 |
| Msa0575740 | Msa0860170 | 0.812473 | 4.165842e-51 | -8.615850e-47 |
| Msa0575740 | Msa0860280 | 0.813798 | 2.133182e-51 | -8.615850e-47 |
| Msa0575740 | Msa0862310 | 0.822513 | 2.276191e-53 | -8.615850e-47 |
| Msa0575740 | Msa0867350 | 0.848335 | 6.543146e-60 | -8.615850e-47 |
| Msa0575740 | Msa0885060 | 0.841153 | 5.647400e-58 | -8.615850e-47 |
| Msa0575740 | Msa0896350 | 0.815345 | 9.695039e-52 | -8.615850e-47 |
| Msa0575740 | Msa0898730 | 0.847309 | 1.254851e-59 | -8.615850e-47 |
| Msa0575740 | Msa0922750 | 0.820999 | 5.096715e-53 | -8.615850e-47 |
| Msa0575740 | Msa0929870 | 0.883652 | 3.743883e-71 | -8.615850e-47 |
| Msa0575740 | Msa0936410 | 0.815989 | 6.966560e-52 | -8.615850e-47 |
| Msa0575740 | Msa0941820 | 0.801040 | 1.086021e-48 | -8.615850e-47 |
| Msa0575740 | Msa0946210 | 0.822289 | 2.565094e-53 | -8.615850e-47 |
| Msa0575740 | Msa0961560 | 0.844289 | 8.288778e-59 | -8.615850e-47 |
| Msa0575740 | Msa0965310 | 0.817049 | 4.033470e-52 | -8.615850e-47 |
| Msa0575740 | Msa0973250 | 0.830678 | 2.564936e-55 | -8.615850e-47 |
| Msa0575740 | Msa0979510 | 0.847403 | 1.182445e-59 | -8.615850e-47 |
| Msa0575740 | Msa0996270 | 0.854839 | 9.423340e-62 | -8.615850e-47 |
| Msa0575740 | Msa0999300 | 0.856586 | 2.910786e-62 | -8.615850e-47 |
| Msa0575740 | Msa0999340 | 0.840440 | 8.685634e-58 | -8.615850e-47 |
| Msa0575740 | Msa0999350 | 0.835470 | 1.647041e-56 | -8.615850e-47 |
| Msa0575740 | Msa0999360 | 0.826383 | 2.795505e-54 | -8.615850e-47 |
| Msa0575740 | Msa0999390 | 0.823696 | 1.205551e-53 | -8.615850e-47 |
| Msa0575740 | Msa0999400 | 0.827001 | 1.990588e-54 | -8.615850e-47 |
| Msa0575740 | Msa0999410 | 0.821539 | 3.827420e-53 | -8.615850e-47 |
| Msa0575740 | Msa0999700 | 0.800402 | 1.466064e-48 | -8.615850e-47 |
| Msa0575740 | Msa1001890 | 0.820228 | 7.662123e-53 | -8.615850e-47 |
| Msa0575740 | Msa1032450 | 0.810623 | 1.051440e-50 | -8.615850e-47 |
| Msa0575740 | Msa1037890 | 0.821189 | 4.608298e-53 | -8.615850e-47 |
| Msa0575740 | Msa1037900 | 0.855954 | 4.459665e-62 | -8.615850e-47 |
| Msa0575740 | Msa1037910 | 0.827358 | 1.635329e-54 | -8.615850e-47 |
| Msa0575740 | Msa1042670 | 0.859184 | 4.930510e-63 | -8.615850e-47 |
| Msa0575740 | Msa1073340 | 0.847055 | 1.472566e-59 | -8.615850e-47 |
| Msa0575740 | Msa1081570 | 0.823067 | 1.691257e-53 | -8.615850e-47 |
| Msa0575740 | Msa1092020 | 0.815971 | 7.031993e-52 | -8.615850e-47 |
| Msa0575740 | Msa1113850 | 0.827184 | 1.799848e-54 | -8.615850e-47 |
| Msa0575740 | Msa1127140 | 0.820487 | 6.684025e-53 | -8.615850e-47 |
| Msa0575740 | Msa1129950 | 0.803031 | 4.232644e-49 | -8.615850e-47 |
| Msa0575740 | Msa1129960 | 0.854594 | 1.109677e-61 | -8.615850e-47 |
| Msa0575740 | Msa1129970 | 0.831895 | 1.287525e-55 | -8.615850e-47 |
| Msa0575740 | Msa1130010 | 0.862356 | 5.371172e-64 | -8.615850e-47 |
| Msa0575740 | Msa1135380 | 0.818078 | 2.364143e-52 | -8.615850e-47 |
| Msa0575740 | Msa1145020 | 0.873318 | 1.613697e-67 | -8.615850e-47 |
| Msa0575740 | Msa1166400 | 0.810087 | 1.372366e-50 | -8.615850e-47 |
| Msa0575740 | Msa1169990 | 0.838277 | 3.163830e-57 | -8.615850e-47 |
| Msa0575740 | Msa1171310 | 0.809519 | 1.817609e-50 | -8.615850e-47 |
| Msa0575740 | Msa1201110 | 0.838163 | 3.384677e-57 | -8.615850e-47 |
| Msa0575740 | Msa1201160 | 0.858826 | 6.309615e-63 | -8.615850e-47 |
| Msa0575740 | Msa1228190 | 0.868846 | 4.819920e-66 | -8.615850e-47 |
| Msa0575740 | Msa1228610 | 0.810112 | 1.355231e-50 | -8.615850e-47 |
| Msa0575740 | Msa1271260 | 0.866453 | 2.821142e-65 | -8.615850e-47 |
| Msa0575740 | Msa1294290 | 0.855002 | 8.449149e-62 | -8.615850e-47 |
| Msa0575740 | Msa1305510 | 0.844311 | 8.175948e-59 | -8.615850e-47 |
| Msa0575740 | Msa1345420 | 0.843231 | 1.590838e-58 | -8.615850e-47 |
| Msa0575740 | Msa1355400 | 0.801271 | 9.743337e-49 | -8.615850e-47 |
| Msa0575740 | Msa1378770 | 0.800683 | 1.284486e-48 | -8.615850e-47 |
| Msa0575740 | Msa1379970 | 0.839286 | 1.735207e-57 | -8.615850e-47 |
| Msa0575740 | Msa1389050 | 0.817408 | 3.348997e-52 | -8.615850e-47 |
| Msa0575740 | Msa1394890 | 0.821003 | 5.086631e-53 | -8.615850e-47 |
| Msa0575740 | Msa1406780 | 0.827066 | 1.920578e-54 | -8.615850e-47 |
| Msa0575740 | Msa1420060 | 0.865413 | 6.013986e-65 | -8.615850e-47 |
| Msa0575740 | Msa1421550 | 0.873233 | 1.723022e-67 | -8.615850e-47 |
| Msa0575740 | Msa1431850 | 0.833306 | 5.751425e-56 | -8.615850e-47 |
| Msa0575740 | Msa1435480 | 0.864543 | 1.127183e-64 | -8.615850e-47 |
| Msa0575740 | Msa1442630 | 0.814639 | 1.390957e-51 | -8.615850e-47 |
| Msa0575740 | Msa1458910 | 0.854020 | 1.625506e-61 | -8.615850e-47 |
| Msa0575740 | Msa1459530 | 0.812997 | 3.199428e-51 | -8.615850e-47 |
| Msa0575740 | Msa1461060 | 0.827116 | 1.868627e-54 | -8.615850e-47 |
| Msa0575740 | Msa1462530 | 0.815304 | 9.901212e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575740 | MtrunA17_Chr8g0392991 | 87.500 | 384 | 15 | 9 | 1 | 377 | 1 | 358 | 0.0 | 634 |
| Msa0575740 | MtrunA17_Chr8g0385441 | 83.648 | 159 | 10 | 3 | 1 | 156 | 1 | 146 | 1.13e-89 | 267 |
| Msa0575740 | MtrunA17_Chr3g0125111 | 81.761 | 159 | 11 | 3 | 1 | 156 | 1 | 144 | 3.16e-83 | 250 |
| Msa0575740 | MtrunA17_Chr4g0043891 | 36.120 | 299 | 126 | 8 | 90 | 377 | 6 | 250 | 2.15e-44 | 154 |
| Msa0575740 | MtrunA17_Chr7g0238431 | 74.627 | 67 | 17 | 0 | 90 | 156 | 6 | 72 | 2.48e-28 | 110 |
| Msa0575740 | MtrunA17_Chr4g0031341 | 63.636 | 77 | 26 | 1 | 92 | 168 | 25 | 99 | 5.32e-27 | 107 |
| Msa0575740 | MtrunA17_Chr1g0153171 | 75.000 | 64 | 16 | 0 | 91 | 154 | 89 | 152 | 8.29e-27 | 106 |
| Msa0575740 | MtrunA17_Chr5g0436661 | 71.429 | 63 | 18 | 0 | 92 | 154 | 33 | 95 | 5.26e-26 | 103 |
| Msa0575740 | MtrunA17_Chr5g0405351 | 70.769 | 65 | 18 | 1 | 90 | 153 | 28 | 92 | 2.15e-25 | 104 |
| Msa0575740 | MtrunA17_Chr7g0223471 | 50.000 | 62 | 31 | 0 | 92 | 153 | 47 | 108 | 7.48e-16 | 78.6 |
| Msa0575740 | MtrunA17_Chr2g0283141 | 50.000 | 62 | 31 | 0 | 92 | 153 | 55 | 116 | 1.46e-15 | 77.8 |
| Msa0575740 | MtrunA17_Chr7g0222981 | 36.170 | 94 | 60 | 0 | 92 | 185 | 68 | 161 | 3.05e-14 | 70.5 |
| Msa0575740 | MtrunA17_Chr1g0212511 | 39.506 | 81 | 47 | 1 | 92 | 170 | 85 | 165 | 9.48e-13 | 67.8 |
| Msa0575740 | MtrunA17_Chr3g0144021 | 42.623 | 61 | 35 | 0 | 92 | 152 | 82 | 142 | 2.97e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575740 | AT3G18010.1 | 36.296 | 405 | 175 | 14 | 1 | 377 | 1 | 350 | 1.71e-61 | 201 |
| Msa0575740 | AT2G01500.1 | 57.692 | 104 | 38 | 3 | 45 | 146 | 16 | 115 | 4.00e-29 | 114 |
| Msa0575740 | AT2G28610.1 | 71.014 | 69 | 20 | 0 | 88 | 156 | 4 | 72 | 9.00e-29 | 112 |
| Msa0575740 | AT5G59340.1 | 61.905 | 84 | 30 | 1 | 85 | 168 | 7 | 88 | 4.79e-28 | 111 |
| Msa0575740 | AT3G11260.1 | 52.000 | 100 | 42 | 2 | 81 | 180 | 13 | 106 | 1.95e-26 | 104 |
| Msa0575740 | AT1G46480.2 | 70.769 | 65 | 19 | 0 | 90 | 154 | 88 | 152 | 2.20e-26 | 104 |
| Msa0575740 | AT1G46480.1 | 70.769 | 65 | 19 | 0 | 90 | 154 | 88 | 152 | 1.83e-25 | 103 |
| Msa0575740 | AT2G17950.1 | 69.697 | 66 | 19 | 1 | 89 | 153 | 35 | 100 | 1.15e-24 | 102 |
| Msa0575740 | AT5G05770.1 | 59.459 | 74 | 28 | 1 | 90 | 163 | 27 | 98 | 1.88e-23 | 94.7 |
| Msa0575740 | AT5G45980.1 | 35.000 | 120 | 69 | 2 | 92 | 211 | 55 | 165 | 1.31e-16 | 80.5 |
| Msa0575740 | AT2G33880.1 | 50.000 | 62 | 31 | 0 | 92 | 153 | 55 | 116 | 4.45e-15 | 76.3 |
| Msa0575740 | AT2G33880.2 | 50.000 | 62 | 31 | 0 | 92 | 153 | 55 | 116 | 4.58e-15 | 76.3 |
| Msa0575740 | AT4G35550.1 | 47.541 | 61 | 32 | 0 | 92 | 152 | 99 | 159 | 5.30e-13 | 68.9 |
| Msa0575740 | AT1G20700.2 | 33.684 | 95 | 59 | 1 | 92 | 182 | 33 | 127 | 1.49e-11 | 62.4 |
| Msa0575740 | AT1G20700.3 | 33.684 | 95 | 59 | 1 | 92 | 182 | 95 | 189 | 3.18e-11 | 62.8 |
| Msa0575740 | AT1G20700.1 | 33.684 | 95 | 59 | 1 | 92 | 182 | 95 | 189 | 4.02e-11 | 62.4 |
| Msa0575740 | AT3G03660.1 | 42.029 | 69 | 40 | 0 | 75 | 143 | 16 | 84 | 4.53e-11 | 63.2 |
| Msa0575740 | AT3G03660.2 | 42.029 | 69 | 40 | 0 | 75 | 143 | 16 | 84 | 5.79e-11 | 63.2 |
| Msa0575740 | AT3G03660.4 | 42.029 | 69 | 40 | 0 | 75 | 143 | 16 | 84 | 7.77e-11 | 62.8 |
| Msa0575740 | AT5G17810.3 | 45.455 | 55 | 30 | 0 | 89 | 143 | 18 | 72 | 8.60e-11 | 62.4 |
| Msa0575740 | AT3G03660.3 | 42.029 | 69 | 40 | 0 | 75 | 143 | 16 | 84 | 9.10e-11 | 63.2 |
| Msa0575740 | AT5G17810.1 | 45.455 | 55 | 30 | 0 | 89 | 143 | 18 | 72 | 9.10e-11 | 62.4 |
| Msa0575740 | AT5G17810.2 | 45.455 | 55 | 30 | 0 | 89 | 143 | 18 | 72 | 9.10e-11 | 62.4 |
Find 91 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGATCTCCATTCCTTAT+TGG | 0.159741 | 4_1:+79685008 | None:intergenic |
| ACAGCAAAGAAGAAACTTTA+TGG | 0.180399 | 4_1:-79685306 | Msa0575740:CDS |
| GCCACCATGAATACGGTTTA+AGG | 0.188842 | 4_1:+79687375 | None:intergenic |
| TCATGGGTCTTGATGAGTTT+TGG | 0.224893 | 4_1:+79685161 | None:intergenic |
| TCCAGTGCTCTTAACTGTTC+TGG | 0.231980 | 4_1:+79687114 | None:intergenic |
| CATGATCTCCATTCCTTATT+GGG | 0.239327 | 4_1:+79685009 | None:intergenic |
| ACTGCCCAGCTTAGAAAGTT+TGG | 0.297339 | 4_1:-79687036 | Msa0575740:CDS |
| GTAATTCTGCTTCATCGAAT+TGG | 0.317991 | 4_1:+79685327 | None:intergenic |
| CACAGTAACAACTAGACTTA+TGG | 0.319387 | 4_1:-79685186 | Msa0575740:CDS |
| GTTATAGTTGAAGTGTTGTT+AGG | 0.334243 | 4_1:+79687403 | None:intergenic |
| TAAGCTGGGCAGTGATTTGT+TGG | 0.366393 | 4_1:+79687046 | None:intergenic |
| ACTGGGACTGGGACTGGTCT+TGG | 0.368417 | 4_1:+79687439 | None:intergenic |
| AACATGGCTGATTATCCATT+TGG | 0.372662 | 4_1:-79687487 | Msa0575740:CDS |
| GAAGTAGTAGGGACTGGGAC+TGG | 0.373838 | 4_1:+79687427 | None:intergenic |
| GTGTTGTTAGGAGAAGTAGT+AGG | 0.385300 | 4_1:+79687415 | None:intergenic |
| TGTAGTTGATACTGTTTAAG+TGG | 0.389042 | 4_1:+79685075 | None:intergenic |
| CCTTCCTTAAACCGTATTCA+TGG | 0.410166 | 4_1:-79687379 | Msa0575740:CDS |
| TTGTAGTAGAGGTGTTTAAG+AGG | 0.411927 | 4_1:+79685234 | None:intergenic |
| CCATCCACATGTTGTCAACT+AGG | 0.413180 | 4_1:+79687536 | None:intergenic |
| GCTCTTAACTGTTCTGGTGT+TGG | 0.418756 | 4_1:+79687120 | None:intergenic |
| ACGGAAGAAACTCAATAAAC+TGG | 0.421182 | 4_1:+79684901 | None:intergenic |
| ATAAATGAAGGGGATTGAAA+TGG | 0.426647 | 4_1:+79687675 | None:intergenic |
| AATTATAAATAAATAGTAGA+AGG | 0.430263 | 4_1:+79687579 | None:intergenic |
| GCTCTTGAAAAGAAAGACTT+AGG | 0.434053 | 4_1:-79686910 | Msa0575740:intron |
| GGAATCTGTTTCAATTCAAA+GGG | 0.434967 | 4_1:-79685399 | Msa0575740:CDS |
| ATATCTCTGTCTCTTTGTGT+TGG | 0.435394 | 4_1:+79684949 | None:intergenic |
| GAACTCACCACAACTGCTGC+TGG | 0.437507 | 4_1:+79687153 | None:intergenic |
| AGGAATCTGTTTCAATTCAA+AGG | 0.438330 | 4_1:-79685400 | Msa0575740:CDS |
| CAGCAGTTGTGGTGAGTTCA+AGG | 0.440070 | 4_1:-79687149 | Msa0575740:CDS |
| GTAGGGACTGGGACTGGGAC+TGG | 0.441780 | 4_1:+79687433 | None:intergenic |
| AATCATTGCCACCATGAATA+CGG | 0.442019 | 4_1:+79687368 | None:intergenic |
| AAATGAATAAGTTGAAATCA+TGG | 0.444662 | 4_1:+79685144 | None:intergenic |
| TAGAAGGAATGAAGTTACTT+AGG | 0.446980 | 4_1:+79687595 | None:intergenic |
| CTTAGTTTCCTTCCACCAAA+TGG | 0.452550 | 4_1:+79687472 | None:intergenic |
| TGTTGTTAGGAGAAGTAGTA+GGG | 0.464395 | 4_1:+79687416 | None:intergenic |
| CACGTACATATAATAAATGA+AGG | 0.475230 | 4_1:+79687663 | None:intergenic |
| TCCTTATTGGGAAAAGTTGA+AGG | 0.475905 | 4_1:+79685021 | None:intergenic |
| TGTAGTAGAGGTGTTTAAGA+GGG | 0.476333 | 4_1:+79685235 | None:intergenic |
| CCAATAAGGAATGGAGATCA+TGG | 0.480192 | 4_1:-79685008 | Msa0575740:CDS |
| TGAAGTTACTTAGGAGTACT+AGG | 0.487924 | 4_1:+79687604 | None:intergenic |
| AAGTAGTAGGGACTGGGACT+GGG | 0.488796 | 4_1:+79687428 | None:intergenic |
| TCTAGTTGTTACTGTGGTTG+TGG | 0.492333 | 4_1:+79685193 | None:intergenic |
| CAGCAGCTGATTCCATTTGA+CGG | 0.494340 | 4_1:+79686944 | None:intergenic |
| AGAAACTCAATAAACTGGTT+GGG | 0.503624 | 4_1:+79684906 | None:intergenic |
| AAGAAACTCAATAAACTGGT+TGG | 0.507314 | 4_1:+79684905 | None:intergenic |
| ACCAGAACAGTTAAGAGCAC+TGG | 0.518122 | 4_1:-79687115 | Msa0575740:CDS |
| AGAATCACAAAGCTAGAGAA+AGG | 0.519499 | 4_1:-79686978 | Msa0575740:CDS |
| ATGGCTGATTATCCATTTGG+TGG | 0.524166 | 4_1:-79687484 | Msa0575740:CDS |
| CTGATTATCCATTTGGTGGA+AGG | 0.529117 | 4_1:-79687480 | Msa0575740:CDS |
| TGTTGGATTTGTTCAGCAGA+AGG | 0.532776 | 4_1:+79687063 | None:intergenic |
| GTAGAGGTGTTTAAGAGGGT+AGG | 0.534985 | 4_1:+79685239 | None:intergenic |
| AGGGGATTGAAATGGAAAAG+TGG | 0.534992 | 4_1:+79687683 | None:intergenic |
| GGGGATTGAAATGGAAAAGT+GGG | 0.535141 | 4_1:+79687684 | None:intergenic |
| GGGACTGGTCTTGGCATGAG+AGG | 0.539540 | 4_1:+79687448 | None:intergenic |
| GATCAGTACTCTAGAACAGA+TGG | 0.548364 | 4_1:-79685356 | Msa0575740:CDS |
| AAAGAAGAAACTTTATGGAA+AGG | 0.550327 | 4_1:-79685301 | Msa0575740:CDS |
| CATTTGGTGGAAGGAAACTA+AGG | 0.551936 | 4_1:-79687471 | Msa0575740:CDS |
| TTAGGAGAAGTAGTAGGGAC+TGG | 0.552441 | 4_1:+79687421 | None:intergenic |
| TAATAATCCAGCAGCAGTTG+TGG | 0.553191 | 4_1:-79687160 | Msa0575740:CDS |
| AAGAGGAAGAGTACTGGTAC+TGG | 0.555814 | 4_1:+79686666 | None:intergenic |
| CCTTATTGGGAAAAGTTGAA+GGG | 0.559443 | 4_1:+79685022 | None:intergenic |
| TGGATGGTGGGTTACAATGA+AGG | 0.562024 | 4_1:-79687520 | Msa0575740:CDS |
| CTGGAAGAATTGTATAGAAG+AGG | 0.567704 | 4_1:-79687096 | Msa0575740:CDS |
| CATAAGTCTAGTTGTTACTG+TGG | 0.571838 | 4_1:+79685187 | None:intergenic |
| AGTTGTTACTGTGGTTGTGG+TGG | 0.572763 | 4_1:+79685196 | None:intergenic |
| CATCCACATGTTGTCAACTA+GGG | 0.572944 | 4_1:+79687537 | None:intergenic |
| CTCTGCAAGAGGAAGAGTAC+TGG | 0.573556 | 4_1:+79686660 | None:intergenic |
| AATGAATAAGTTGAAATCAT+GGG | 0.576972 | 4_1:+79685145 | None:intergenic |
| AAGCCCTAGTTGACAACATG+TGG | 0.586362 | 4_1:-79687540 | Msa0575740:exon |
| GCTAGCTGTTGTTGTAGTAG+AGG | 0.592314 | 4_1:+79685223 | None:intergenic |
| GAATTATAGACCTCTGCAAG+AGG | 0.592853 | 4_1:+79686649 | None:intergenic |
| TTGTAGTTGTAGTATGTGTG+AGG | 0.596125 | 4_1:+79685119 | None:intergenic |
| TAGGAGAAGTAGTAGGGACT+GGG | 0.599416 | 4_1:+79687422 | None:intergenic |
| CAGTACTCTTCCTCTTGCAG+AGG | 0.600602 | 4_1:-79686659 | Msa0575740:intron |
| ACTGGTACTGGAATTTGTAG+AGG | 0.614002 | 4_1:+79686678 | None:intergenic |
| CGTACATATAATAAATGAAG+GGG | 0.615451 | 4_1:+79687665 | None:intergenic |
| ACGTACATATAATAAATGAA+GGG | 0.617169 | 4_1:+79687664 | None:intergenic |
| ATGGTGGGTTACAATGAAGG+TGG | 0.633455 | 4_1:-79687517 | Msa0575740:CDS |
| CCATGAATACGGTTTAAGGA+AGG | 0.634433 | 4_1:+79687379 | None:intergenic |
| TACTACAACAACAGCTAGCG+TGG | 0.635131 | 4_1:-79685219 | Msa0575740:CDS |
| CTGGTACTGGAATTTGTAGA+GGG | 0.635755 | 4_1:+79686679 | None:intergenic |
| AGTTGACAACATGTGGATGG+TGG | 0.636173 | 4_1:-79687533 | Msa0575740:exon |
| AGTACTCTAGAACAGATGGA+TGG | 0.652013 | 4_1:-79685352 | Msa0575740:CDS |
| CATCACAATCTGCAGCAGCA+AGG | 0.652597 | 4_1:-79687331 | Msa0575740:intron |
| TCCTTAAACCGTATTCATGG+TGG | 0.664947 | 4_1:-79687376 | Msa0575740:CDS |
| GTTGACAACATGTGGATGGT+GGG | 0.672963 | 4_1:-79687532 | Msa0575740:exon |
| CCTAGTTGACAACATGTGGA+TGG | 0.687638 | 4_1:-79687536 | Msa0575740:exon |
| TGAAGGTGGTGAGTTCAACA+TGG | 0.718834 | 4_1:-79687503 | Msa0575740:CDS |
| CAGTTGTGGTGAGTTCAAGG+TGG | 0.724586 | 4_1:-79687146 | Msa0575740:CDS |
| TTATGGAAAGGAATGCCACG+TGG | 0.750564 | 4_1:-79685289 | Msa0575740:CDS |
| TAACTGCATCATATGCCACG+TGG | 0.781883 | 4_1:+79685274 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATAAAATAAAAAA+AGG | + | chr4_1:79686533-79686552 | None:intergenic | 0.0% |
| !! | AATTATAAATAAATAGTAGA+AGG | + | chr4_1:79684998-79685017 | None:intergenic | 10.0% |
| !! | TATATATATACAAACAATAT+TGG | + | chr4_1:79685309-79685328 | None:intergenic | 10.0% |
| !! | TAAAATAAAATAAAAAAAGG+TGG | + | chr4_1:79686530-79686549 | None:intergenic | 10.0% |
| !! | TTTAAGGAATAATAATCATA+AGG | - | chr4_1:79686063-79686082 | Msa0575740:intron | 15.0% |
| !!! | TAGAATTTTCCTTTAATTAA+AGG | + | chr4_1:79686708-79686727 | None:intergenic | 15.0% |
| !! | TTAATTAAAGGAAAATTCTA+TGG | - | chr4_1:79686708-79686727 | Msa0575740:CDS | 15.0% |
| !! | GAAAGAAAGAATTTAATTAA+GGG | + | chr4_1:79687143-79687162 | None:intergenic | 15.0% |
| !! | AGAAAGAAAGAATTTAATTA+AGG | + | chr4_1:79687144-79687163 | None:intergenic | 15.0% |
| !! | ACGTACATATAATAAATGAA+GGG | + | chr4_1:79684913-79684932 | None:intergenic | 20.0% |
| !!! | GCAAGGTATTATATAATATA+TGG | - | chr4_1:79685260-79685279 | Msa0575740:CDS | 20.0% |
| !! | GTAGTATGTACTAATAATTA+AGG | + | chr4_1:79685732-79685751 | None:intergenic | 20.0% |
| !!! | ATTATTCCTTAAAGACTTTT+TGG | + | chr4_1:79686056-79686075 | None:intergenic | 20.0% |
| !! | ACTACTAAAAAGTTACTTAT+AGG | - | chr4_1:79686157-79686176 | Msa0575740:intron | 20.0% |
| !! | AGAAAAGAAAAGAAAAGAAA+AGG | - | chr4_1:79686239-79686258 | Msa0575740:intron | 20.0% |
| !! | TTTCATAGAAAGAAGAATAA+TGG | + | chr4_1:79686442-79686461 | None:intergenic | 20.0% |
| !! | AAAAAACAAAAACTAACCAT+AGG | + | chr4_1:79686614-79686633 | None:intergenic | 20.0% |
| !!! | AGTCATAAGAATAACTTTTT+TGG | - | chr4_1:79686734-79686753 | Msa0575740:intron | 20.0% |
| !!! | AATGAATAAGTTGAAATCAT+GGG | + | chr4_1:79687432-79687451 | None:intergenic | 20.0% |
| !!! | AAATGAATAAGTTGAAATCA+TGG | + | chr4_1:79687433-79687452 | None:intergenic | 20.0% |
| ! | CGTACATATAATAAATGAAG+GGG | + | chr4_1:79684912-79684931 | None:intergenic | 25.0% |
| ! | CACGTACATATAATAAATGA+AGG | + | chr4_1:79684914-79684933 | None:intergenic | 25.0% |
| !! | TGATATGTTTTATCATGAGT+AGG | - | chr4_1:79685364-79685383 | Msa0575740:CDS | 25.0% |
| ! | AGAAAGTTTGGAAAAATTGA+AGG | - | chr4_1:79685550-79685569 | Msa0575740:intron | 25.0% |
| !! | AAGGCAAAAATGTTTTCTAT+TGG | - | chr4_1:79685569-79685588 | Msa0575740:intron | 25.0% |
| ! | CTGTAATTATTTAGTGTTAG+AGG | - | chr4_1:79685701-79685720 | Msa0575740:intron | 25.0% |
| !!! | TTGTTTTTCTTTTTGTCAAC+AGG | - | chr4_1:79685826-79685845 | Msa0575740:intron | 25.0% |
| ! | AAAAGAGATATGTATTTGTC+TGG | + | chr4_1:79686012-79686031 | None:intergenic | 25.0% |
| !!! | ACTTTTTGGTGATTGATTAA+GGG | + | chr4_1:79686042-79686061 | None:intergenic | 25.0% |
| !!! | TTTCCTTGTAGTAATTTGTT+GGG | - | chr4_1:79686262-79686281 | Msa0575740:intron | 25.0% |
| !!! | TAATTTGTTGGGAAATGAAA+AGG | - | chr4_1:79686273-79686292 | Msa0575740:intron | 25.0% |
| !!! | AATTTGTTGGGAAATGAAAA+GGG | - | chr4_1:79686274-79686293 | Msa0575740:intron | 25.0% |
| ! | AAATAAAAAAAGGTGGATGT+TGG | + | chr4_1:79686523-79686542 | None:intergenic | 25.0% |
| ! | ACCATAGGTAAGAAAAAAAA+GGG | + | chr4_1:79686599-79686618 | None:intergenic | 25.0% |
| ! | AACCATAGGTAAGAAAAAAA+AGG | + | chr4_1:79686600-79686619 | None:intergenic | 25.0% |
| !!! | TACAGTATTTTTTTGAGTTG+AGG | - | chr4_1:79686658-79686677 | Msa0575740:intron | 25.0% |
| !!! | TAGTTGATGATATTATGTGA+TGG | + | chr4_1:79686938-79686957 | None:intergenic | 25.0% |
| !! | TACATGTACTATTTTATCGT+TGG | + | chr4_1:79686980-79686999 | None:intergenic | 25.0% |
| ! | AAAGAAGAAACTTTATGGAA+AGG | - | chr4_1:79687273-79687292 | Msa0575740:intron | 25.0% |
| ATAAATGAAGGGGATTGAAA+TGG | + | chr4_1:79684902-79684921 | None:intergenic | 30.0% | |
| TAGAAGGAATGAAGTTACTT+AGG | + | chr4_1:79684982-79685001 | None:intergenic | 30.0% | |
| !! | GTTATAGTTGAAGTGTTGTT+AGG | + | chr4_1:79685174-79685193 | None:intergenic | 30.0% |
| ! | TTTTCCAAACTTTCTAAGCT+GGG | + | chr4_1:79685545-79685564 | None:intergenic | 30.0% |
| ! | TTTTTCCAAACTTTCTAAGC+TGG | + | chr4_1:79685546-79685565 | None:intergenic | 30.0% |
| !! | GACTTTTTGGTGATTGATTA+AGG | + | chr4_1:79686043-79686062 | None:intergenic | 30.0% |
| CAATCACCAAAAAGTCTTTA+AGG | - | chr4_1:79686047-79686066 | Msa0575740:intron | 30.0% | |
| CAGTAAGTAATACACAAACT+AGG | - | chr4_1:79686180-79686199 | Msa0575740:intron | 30.0% | |
| GTAATACACAAACTAGGTAT+AGG | - | chr4_1:79686186-79686205 | Msa0575740:intron | 30.0% | |
| AGGTATAGGAAAAGTAAGAA+AGG | - | chr4_1:79686200-79686219 | Msa0575740:intron | 30.0% | |
| ! | GTTTCCTTGTAGTAATTTGT+TGG | - | chr4_1:79686261-79686280 | Msa0575740:intron | 30.0% |
| TTTCCCAACAAATTACTACA+AGG | + | chr4_1:79686268-79686287 | None:intergenic | 30.0% | |
| TGCTGTTATGAAATTTAGCT+GGG | - | chr4_1:79686332-79686351 | Msa0575740:intron | 30.0% | |
| ! | GAAAGAAGAATAATGGAGAT+AGG | + | chr4_1:79686435-79686454 | None:intergenic | 30.0% |
| GTGAAGTCAAATTAAAGCAA+GGG | + | chr4_1:79686495-79686514 | None:intergenic | 30.0% | |
| TGTGAAGTCAAATTAAAGCA+AGG | + | chr4_1:79686496-79686515 | None:intergenic | 30.0% | |
| TAAATAACGTGTGAGGAAAA+AGG | + | chr4_1:79686637-79686656 | None:intergenic | 30.0% | |
| ! | GTTTTCATCTCATACTCATA+CGG | - | chr4_1:79686680-79686699 | Msa0575740:CDS | 30.0% |
| CATACGGTACCTTTAATTAA+AGG | - | chr4_1:79686696-79686715 | Msa0575740:CDS | 30.0% | |
| ! | GATGAATTGATGATACTATG+AGG | + | chr4_1:79686835-79686854 | None:intergenic | 30.0% |
| TGTTACACTTATAACAAGGT+AGG | + | chr4_1:79686891-79686910 | None:intergenic | 30.0% | |
| TCTTAAGTGTTACACTTTGT+GGG | + | chr4_1:79686915-79686934 | None:intergenic | 30.0% | |
| TTTAATTAAGGGAGCTTCTA+CGG | + | chr4_1:79687132-79687151 | None:intergenic | 30.0% | |
| CTTTCTTTCTTTCTTTCTAC+AGG | - | chr4_1:79687154-79687173 | Msa0575740:CDS | 30.0% | |
| AGGAATCTGTTTCAATTCAA+AGG | - | chr4_1:79687174-79687193 | Msa0575740:CDS | 30.0% | |
| GGAATCTGTTTCAATTCAAA+GGG | - | chr4_1:79687175-79687194 | Msa0575740:CDS | 30.0% | |
| ACAGCAAAGAAGAAACTTTA+TGG | - | chr4_1:79687268-79687287 | Msa0575740:intron | 30.0% | |
| ! | TGTAGTTGATACTGTTTAAG+TGG | + | chr4_1:79687502-79687521 | None:intergenic | 30.0% |
| AGAAACTCAATAAACTGGTT+GGG | + | chr4_1:79687671-79687690 | None:intergenic | 30.0% | |
| AAGAAACTCAATAAACTGGT+TGG | + | chr4_1:79687672-79687691 | None:intergenic | 30.0% | |
| !! | TGAAGTTACTTAGGAGTACT+AGG | + | chr4_1:79684973-79684992 | None:intergenic | 35.0% |
| AACATGGCTGATTATCCATT+TGG | - | chr4_1:79685087-79685106 | Msa0575740:CDS | 35.0% | |
| TGTTGTTAGGAGAAGTAGTA+GGG | + | chr4_1:79685161-79685180 | None:intergenic | 35.0% | |
| AATCATTGCCACCATGAATA+CGG | + | chr4_1:79685209-79685228 | None:intergenic | 35.0% | |
| CTGGAAGAATTGTATAGAAG+AGG | - | chr4_1:79685478-79685497 | Msa0575740:intron | 35.0% | |
| AGAATCACAAAGCTAGAGAA+AGG | - | chr4_1:79685596-79685615 | Msa0575740:intron | 35.0% | |
| GCTCTTGAAAAGAAAGACTT+AGG | - | chr4_1:79685664-79685683 | Msa0575740:intron | 35.0% | |
| GTACATACTACTACATGACA+TGG | - | chr4_1:79685741-79685760 | Msa0575740:intron | 35.0% | |
| AAGTTGAACACACCAAAAAC+TGG | - | chr4_1:79685869-79685888 | Msa0575740:intron | 35.0% | |
| TGGTGATTGATTAAGGGAAA+AGG | + | chr4_1:79686036-79686055 | None:intergenic | 35.0% | |
| TATAATCAGTGCTTAGTGAG+TGG | + | chr4_1:79686097-79686116 | None:intergenic | 35.0% | |
| ! | TAAGAAAGGAGCATACTAGT+AGG | - | chr4_1:79686214-79686233 | Msa0575740:intron | 35.0% |
| CTGCTGTTATGAAATTTAGC+TGG | - | chr4_1:79686331-79686350 | Msa0575740:intron | 35.0% | |
| ! | ATGAAATTTAGCTGGGCTTT+TGG | - | chr4_1:79686339-79686358 | Msa0575740:intron | 35.0% |
| ! | TGAAATTTAGCTGGGCTTTT+GGG | - | chr4_1:79686340-79686359 | Msa0575740:intron | 35.0% |
| ! | AAGTCAAGTCAGTAGCTTTT+GGG | - | chr4_1:79686399-79686418 | Msa0575740:intron | 35.0% |
| ! | AAGAAAAAAAAGGGCATGCA+CGG | + | chr4_1:79686590-79686609 | None:intergenic | 35.0% |
| !!! | GCCCTTTTTTTTCTTACCTA+TGG | - | chr4_1:79686595-79686614 | Msa0575740:intron | 35.0% |
| ACTGTACTAAATAACGTGTG+AGG | + | chr4_1:79686644-79686663 | None:intergenic | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | + | chr4_1:79686914-79686933 | None:intergenic | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | + | chr4_1:79686916-79686935 | None:intergenic | 35.0% | |
| TAGTAATGCTTGCAACATCT+TGG | + | chr4_1:79687006-79687025 | None:intergenic | 35.0% | |
| GTAATTCTGCTTCATCGAAT+TGG | + | chr4_1:79687250-79687269 | None:intergenic | 35.0% | |
| !! | TGTAGTAGAGGTGTTTAAGA+GGG | + | chr4_1:79687342-79687361 | None:intergenic | 35.0% |
| !! | TTGTAGTAGAGGTGTTTAAG+AGG | + | chr4_1:79687343-79687362 | None:intergenic | 35.0% |
| CATAAGTCTAGTTGTTACTG+TGG | + | chr4_1:79687390-79687409 | None:intergenic | 35.0% | |
| CACAGTAACAACTAGACTTA+TGG | - | chr4_1:79687388-79687407 | Msa0575740:CDS | 35.0% | |
| TTGTAGTTGTAGTATGTGTG+AGG | + | chr4_1:79687458-79687477 | None:intergenic | 35.0% | |
| CCTTATTGGGAAAAGTTGAA+GGG | + | chr4_1:79687555-79687574 | None:intergenic | 35.0% | |
| TCCTTATTGGGAAAAGTTGA+AGG | + | chr4_1:79687556-79687575 | None:intergenic | 35.0% | |
| ! | CAACTTTTCCCAATAAGGAA+TGG | - | chr4_1:79687557-79687576 | Msa0575740:five_prime_UTR | 35.0% |
| CATGATCTCCATTCCTTATT+GGG | + | chr4_1:79687568-79687587 | None:intergenic | 35.0% | |
| ATATCTCTGTCTCTTTGTGT+TGG | + | chr4_1:79687628-79687647 | None:intergenic | 35.0% | |
| ACGGAAGAAACTCAATAAAC+TGG | + | chr4_1:79687676-79687695 | None:intergenic | 35.0% | |
| GGGGATTGAAATGGAAAAGT+GGG | + | chr4_1:79684893-79684912 | None:intergenic | 40.0% | |
| AGGGGATTGAAATGGAAAAG+TGG | + | chr4_1:79684894-79684913 | None:intergenic | 40.0% | |
| ! | CTAGGGCTTTTCTCACTAAA+AGG | + | chr4_1:79685023-79685042 | None:intergenic | 40.0% |
| CATCCACATGTTGTCAACTA+GGG | + | chr4_1:79685040-79685059 | None:intergenic | 40.0% | |
| ATGGCTGATTATCCATTTGG+TGG | - | chr4_1:79685090-79685109 | Msa0575740:CDS | 40.0% | |
| ! | CTGATTATCCATTTGGTGGA+AGG | - | chr4_1:79685094-79685113 | Msa0575740:CDS | 40.0% |
| CTTAGTTTCCTTCCACCAAA+TGG | + | chr4_1:79685105-79685124 | None:intergenic | 40.0% | |
| ! | CATTTGGTGGAAGGAAACTA+AGG | - | chr4_1:79685103-79685122 | Msa0575740:CDS | 40.0% |
| ! | GTGTTGTTAGGAGAAGTAGT+AGG | + | chr4_1:79685162-79685181 | None:intergenic | 40.0% |
| CCATGAATACGGTTTAAGGA+AGG | + | chr4_1:79685198-79685217 | None:intergenic | 40.0% | |
| CCTTCCTTAAACCGTATTCA+TGG | - | chr4_1:79685195-79685214 | Msa0575740:CDS | 40.0% | |
| TCCTTAAACCGTATTCATGG+TGG | - | chr4_1:79685198-79685217 | Msa0575740:CDS | 40.0% | |
| TAATAATCCAGCAGCAGTTG+TGG | - | chr4_1:79685414-79685433 | Msa0575740:intron | 40.0% | |
| ! | TGTTGGATTTGTTCAGCAGA+AGG | + | chr4_1:79685514-79685533 | None:intergenic | 40.0% |
| ! | CTGGTACTGGAATTTGTAGA+GGG | + | chr4_1:79685898-79685917 | None:intergenic | 40.0% |
| ! | ACTGGTACTGGAATTTGTAG+AGG | + | chr4_1:79685899-79685918 | None:intergenic | 40.0% |
| GAATTATAGACCTCTGCAAG+AGG | + | chr4_1:79685928-79685947 | None:intergenic | 40.0% | |
| ! | AAGGAAGGAATGCAGCTTTT+AGG | + | chr4_1:79686301-79686320 | None:intergenic | 40.0% |
| ! | GAAATTTAGCTGGGCTTTTG+GGG | - | chr4_1:79686341-79686360 | Msa0575740:intron | 40.0% |
| ! | CAAGTCAAGTCAGTAGCTTT+TGG | - | chr4_1:79686398-79686417 | Msa0575740:intron | 40.0% |
| !!! | AAGCAAGGGTTGTCTTGTTT+TGG | + | chr4_1:79686481-79686500 | None:intergenic | 40.0% |
| ATGCCATTGTACAAACACTG+GGG | + | chr4_1:79686800-79686819 | None:intergenic | 40.0% | |
| GATGCCATTGTACAAACACT+GGG | + | chr4_1:79686801-79686820 | None:intergenic | 40.0% | |
| TGATGCCATTGTACAAACAC+TGG | + | chr4_1:79686802-79686821 | None:intergenic | 40.0% | |
| ! | GGGGTGTTACACTTATAACA+AGG | + | chr4_1:79686895-79686914 | None:intergenic | 40.0% |
| !! | GATCAGTACTCTAGAACAGA+TGG | - | chr4_1:79687218-79687237 | Msa0575740:intron | 40.0% |
| !! | AGTACTCTAGAACAGATGGA+TGG | - | chr4_1:79687222-79687241 | Msa0575740:intron | 40.0% |
| TCTAGTTGTTACTGTGGTTG+TGG | + | chr4_1:79687384-79687403 | None:intergenic | 40.0% | |
| ! | CATGGGTCTTGATGAGTTTT+GGG | + | chr4_1:79687415-79687434 | None:intergenic | 40.0% |
| ! | TCATGGGTCTTGATGAGTTT+TGG | + | chr4_1:79687416-79687435 | None:intergenic | 40.0% |
| ! | CCCTTCAACTTTTCCCAATA+AGG | - | chr4_1:79687552-79687571 | Msa0575740:five_prime_UTR | 40.0% |
| CCATGATCTCCATTCCTTAT+TGG | + | chr4_1:79687569-79687588 | None:intergenic | 40.0% | |
| CCAATAAGGAATGGAGATCA+TGG | - | chr4_1:79687566-79687585 | Msa0575740:five_prime_UTR | 40.0% | |
| AAGCCCTAGTTGACAACATG+TGG | - | chr4_1:79685034-79685053 | Msa0575740:CDS | 45.0% | |
| CCATCCACATGTTGTCAACT+AGG | + | chr4_1:79685041-79685060 | None:intergenic | 45.0% | |
| CCTAGTTGACAACATGTGGA+TGG | - | chr4_1:79685038-79685057 | Msa0575740:CDS | 45.0% | |
| AGTTGACAACATGTGGATGG+TGG | - | chr4_1:79685041-79685060 | Msa0575740:CDS | 45.0% | |
| GTTGACAACATGTGGATGGT+GGG | - | chr4_1:79685042-79685061 | Msa0575740:CDS | 45.0% | |
| !! | TGGATGGTGGGTTACAATGA+AGG | - | chr4_1:79685054-79685073 | Msa0575740:CDS | 45.0% |
| !! | ATGGTGGGTTACAATGAAGG+TGG | - | chr4_1:79685057-79685076 | Msa0575740:CDS | 45.0% |
| TGAAGGTGGTGAGTTCAACA+TGG | - | chr4_1:79685071-79685090 | Msa0575740:CDS | 45.0% | |
| TAGGAGAAGTAGTAGGGACT+GGG | + | chr4_1:79685155-79685174 | None:intergenic | 45.0% | |
| TTAGGAGAAGTAGTAGGGAC+TGG | + | chr4_1:79685156-79685175 | None:intergenic | 45.0% | |
| GCCACCATGAATACGGTTTA+AGG | + | chr4_1:79685202-79685221 | None:intergenic | 45.0% | |
| GCTCTTAACTGTTCTGGTGT+TGG | + | chr4_1:79685457-79685476 | None:intergenic | 45.0% | |
| ! | ACCAGAACAGTTAAGAGCAC+TGG | - | chr4_1:79685459-79685478 | Msa0575740:intron | 45.0% |
| TCCAGTGCTCTTAACTGTTC+TGG | + | chr4_1:79685463-79685482 | None:intergenic | 45.0% | |
| ! | TAAGCTGGGCAGTGATTTGT+TGG | + | chr4_1:79685531-79685550 | None:intergenic | 45.0% |
| ACTGCCCAGCTTAGAAAGTT+TGG | - | chr4_1:79685538-79685557 | Msa0575740:intron | 45.0% | |
| ! | CAGCAGCTGATTCCATTTGA+CGG | + | chr4_1:79685633-79685652 | None:intergenic | 45.0% |
| ! | TTTTGTCAACAGGCGCAAGT+AGG | - | chr4_1:79685836-79685855 | Msa0575740:intron | 45.0% |
| ! | TGTAGAGGGTAGCCAGTTTT+TGG | + | chr4_1:79685884-79685903 | None:intergenic | 45.0% |
| !! | AAGAGGAAGAGTACTGGTAC+TGG | + | chr4_1:79685911-79685930 | None:intergenic | 45.0% |
| CTGCATTCCTTCCTTTCTGT+CGG | - | chr4_1:79686306-79686325 | Msa0575740:intron | 45.0% | |
| TGCATTCCTTCCTTTCTGTC+GGG | - | chr4_1:79686307-79686326 | Msa0575740:intron | 45.0% | |
| !!! | CAAGGGTTGTCTTGTTTTGG+TGG | + | chr4_1:79686478-79686497 | None:intergenic | 45.0% |
| ACACCCCAGTGTTTGTACAA+TGG | - | chr4_1:79686794-79686813 | Msa0575740:intron | 45.0% | |
| TTATGGAAAGGAATGCCACG+TGG | - | chr4_1:79687285-79687304 | Msa0575740:intron | 45.0% | |
| TAACTGCATCATATGCCACG+TGG | + | chr4_1:79687303-79687322 | None:intergenic | 45.0% | |
| !! | GTAGAGGTGTTTAAGAGGGT+AGG | + | chr4_1:79687338-79687357 | None:intergenic | 45.0% |
| GCTAGCTGTTGTTGTAGTAG+AGG | + | chr4_1:79687354-79687373 | None:intergenic | 45.0% | |
| TACTACAACAACAGCTAGCG+TGG | - | chr4_1:79687355-79687374 | Msa0575740:CDS | 45.0% | |
| AGTTGTTACTGTGGTTGTGG+TGG | + | chr4_1:79687381-79687400 | None:intergenic | 45.0% | |
| AAGTAGTAGGGACTGGGACT+GGG | + | chr4_1:79685149-79685168 | None:intergenic | 50.0% | |
| CATCACAATCTGCAGCAGCA+AGG | - | chr4_1:79685243-79685262 | Msa0575740:CDS | 50.0% | |
| CAGCAGTTGTGGTGAGTTCA+AGG | - | chr4_1:79685425-79685444 | Msa0575740:intron | 50.0% | |
| CAGTTGTGGTGAGTTCAAGG+TGG | - | chr4_1:79685428-79685447 | Msa0575740:intron | 50.0% | |
| GCAAAAACGACGCCGTCAAA+TGG | - | chr4_1:79685618-79685637 | Msa0575740:intron | 50.0% | |
| ! | CTCTGCAAGAGGAAGAGTAC+TGG | + | chr4_1:79685917-79685936 | None:intergenic | 50.0% |
| CAGTACTCTTCCTCTTGCAG+AGG | - | chr4_1:79685915-79685934 | Msa0575740:intron | 50.0% | |
| GCATTCCTTCCTTTCTGTCG+GGG | - | chr4_1:79686308-79686327 | Msa0575740:intron | 50.0% | |
| GAAGTAGTAGGGACTGGGAC+TGG | + | chr4_1:79685150-79685169 | None:intergenic | 55.0% | |
| GAACTCACCACAACTGCTGC+TGG | + | chr4_1:79685424-79685443 | None:intergenic | 55.0% | |
| TAACAGCAGCCCCGACAGAA+AGG | + | chr4_1:79686320-79686339 | None:intergenic | 55.0% | |
| !! | GGGACTGGTCTTGGCATGAG+AGG | + | chr4_1:79685129-79685148 | None:intergenic | 60.0% |
| !! | ACTGGGACTGGGACTGGTCT+TGG | + | chr4_1:79685138-79685157 | None:intergenic | 60.0% |
| AGCAGCCCCGACAGAAAGGA+AGG | + | chr4_1:79686316-79686335 | None:intergenic | 60.0% | |
| GGAGCTTCTACGGTGCAGTC+AGG | + | chr4_1:79687122-79687141 | None:intergenic | 60.0% | |
| GTAGGGACTGGGACTGGGAC+TGG | + | chr4_1:79685144-79685163 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 79684890 | 79687706 | 79684890 | ID=Msa0575740;Name=Msa0575740 |
| chr4_1 | mRNA | 79684890 | 79687706 | 79684890 | ID=Msa0575740-mRNA-1;Parent=Msa0575740;Name=Msa0575740-mRNA-1;_AED=0.02;_eAED=0.02;_QI=161|0.33|0.25|1|1|1|4|0|377 |
| chr4_1 | exon | 79684890 | 79685420 | 79684890 | ID=Msa0575740-mRNA-1:exon:28422;Parent=Msa0575740-mRNA-1 |
| chr4_1 | exon | 79686660 | 79686748 | 79686660 | ID=Msa0575740-mRNA-1:exon:28421;Parent=Msa0575740-mRNA-1 |
| chr4_1 | exon | 79686911 | 79687210 | 79686911 | ID=Msa0575740-mRNA-1:exon:28420;Parent=Msa0575740-mRNA-1 |
| chr4_1 | exon | 79687332 | 79687706 | 79687332 | ID=Msa0575740-mRNA-1:exon:28419;Parent=Msa0575740-mRNA-1 |
| chr4_1 | five_prime_UTR | 79687546 | 79687706 | 79687546 | ID=Msa0575740-mRNA-1:five_prime_utr;Parent=Msa0575740-mRNA-1 |
| chr4_1 | CDS | 79687332 | 79687545 | 79687332 | ID=Msa0575740-mRNA-1:cds;Parent=Msa0575740-mRNA-1 |
| chr4_1 | CDS | 79686911 | 79687210 | 79686911 | ID=Msa0575740-mRNA-1:cds;Parent=Msa0575740-mRNA-1 |
| chr4_1 | CDS | 79686660 | 79686748 | 79686660 | ID=Msa0575740-mRNA-1:cds;Parent=Msa0575740-mRNA-1 |
| chr4_1 | CDS | 79684890 | 79685420 | 79684890 | ID=Msa0575740-mRNA-1:cds;Parent=Msa0575740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
