Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591800 | MCI43829.1 | 73.016 | 63 | 17 | 0 | 3 | 65 | 12 | 74 | 1.14e-23 | 97.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591800 | sp|Q8LB81|GDL79_ARATH | 65.000 | 60 | 16 | 1 | 44 | 98 | 270 | 329 | 3.93e-20 | 86.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591800 | A0A392S574 | 73.016 | 63 | 17 | 0 | 3 | 65 | 12 | 74 | 5.46e-24 | 97.4 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0055450 | Msa0591800 | 0.832773 | 7.805360e-56 | -8.615850e-47 |
| Msa0074650 | Msa0591800 | 0.818069 | 2.375862e-52 | -8.615850e-47 |
| Msa0104500 | Msa0591800 | 0.861838 | 7.743706e-64 | -8.615850e-47 |
| Msa0124130 | Msa0591800 | 0.833100 | 6.474885e-56 | -8.615850e-47 |
| Msa0149140 | Msa0591800 | 0.818434 | 1.964471e-52 | -8.615850e-47 |
| Msa0152480 | Msa0591800 | 0.813987 | 1.937485e-51 | -8.615850e-47 |
| Msa0152500 | Msa0591800 | 0.808718 | 2.699319e-50 | -8.615850e-47 |
| Msa0194380 | Msa0591800 | 0.827940 | 1.185063e-54 | -8.615850e-47 |
| Msa0206800 | Msa0591800 | 0.804544 | 2.052701e-49 | -8.615850e-47 |
| Msa0373960 | Msa0591800 | 0.872603 | 2.802150e-67 | -8.615850e-47 |
| Msa0382010 | Msa0591800 | 0.802584 | 5.233669e-49 | -8.615850e-47 |
| Msa0406000 | Msa0591800 | 0.832510 | 9.069920e-56 | -8.615850e-47 |
| Msa0417440 | Msa0591800 | 0.801172 | 1.020915e-48 | -8.615850e-47 |
| Msa0423100 | Msa0591800 | 0.876686 | 1.145956e-68 | -8.615850e-47 |
| Msa0424330 | Msa0591800 | 0.823973 | 1.037769e-53 | -8.615850e-47 |
| Msa0424340 | Msa0591800 | 0.832800 | 7.689066e-56 | -8.615850e-47 |
| Msa0441590 | Msa0591800 | 0.841814 | 3.781610e-58 | -8.615850e-47 |
| Msa0451400 | Msa0591800 | 0.831816 | 1.346768e-55 | -8.615850e-47 |
| Msa0469260 | Msa0591800 | 0.855099 | 7.918259e-62 | -8.615850e-47 |
| Msa0242540 | Msa0591800 | 0.807247 | 5.547205e-50 | -8.615850e-47 |
| Msa0252630 | Msa0591800 | 0.835506 | 1.613061e-56 | -8.615850e-47 |
| Msa0252770 | Msa0591800 | 0.800869 | 1.176986e-48 | -8.615850e-47 |
| Msa0277290 | Msa0591800 | 0.830872 | 2.299429e-55 | -8.615850e-47 |
| Msa0280750 | Msa0591800 | 0.840280 | 9.565115e-58 | -8.615850e-47 |
| Msa0291330 | Msa0591800 | 0.849309 | 3.511809e-60 | -8.615850e-47 |
| Msa0314630 | Msa0591800 | 0.801065 | 1.073273e-48 | -8.615850e-47 |
| Msa0322830 | Msa0591800 | 0.830833 | 2.349800e-55 | -8.615850e-47 |
| Msa0322840 | Msa0591800 | 0.808195 | 3.489045e-50 | -8.615850e-47 |
| Msa0322860 | Msa0591800 | 0.836270 | 1.032802e-56 | -8.615850e-47 |
| Msa0329460 | Msa0591800 | 0.855154 | 7.632239e-62 | -8.615850e-47 |
| Msa0329620 | Msa0591800 | 0.800792 | 1.220628e-48 | -8.615850e-47 |
| Msa0351770 | Msa0591800 | 0.840547 | 8.140181e-58 | -8.615850e-47 |
| Msa0359250 | Msa0591800 | 0.815771 | 7.792931e-52 | -8.615850e-47 |
| Msa0492190 | Msa0591800 | 0.822024 | 2.955659e-53 | -8.615850e-47 |
| Msa0515950 | Msa0591800 | 0.852479 | 4.493041e-61 | -8.615850e-47 |
| Msa0520510 | Msa0591800 | 0.829861 | 4.061204e-55 | -8.615850e-47 |
| Msa0534930 | Msa0591800 | 0.835470 | 1.647360e-56 | -8.615850e-47 |
| Msa0575740 | Msa0591800 | 0.835035 | 2.120850e-56 | -8.615850e-47 |
| Msa0591790 | Msa0591800 | 0.819967 | 8.791988e-53 | -8.615850e-47 |
| Msa0591800 | Msa0667820 | 0.800245 | 1.577582e-48 | -8.615850e-47 |
| Msa0591800 | Msa0667850 | 0.816735 | 4.745333e-52 | -8.615850e-47 |
| Msa0591800 | Msa0669840 | 0.842700 | 2.203257e-58 | -8.615850e-47 |
| Msa0591800 | Msa0682360 | 0.832911 | 7.212919e-56 | -8.615850e-47 |
| Msa0591800 | Msa0711320 | 0.820931 | 5.282842e-53 | -8.615850e-47 |
| Msa0591800 | Msa0725860 | 0.856244 | 3.668357e-62 | -8.615850e-47 |
| Msa0591800 | Msa0734170 | 0.812055 | 5.139000e-51 | -8.615850e-47 |
| Msa0591800 | Msa0739470 | 0.855965 | 4.427115e-62 | -8.615850e-47 |
| Msa0591800 | Msa0739480 | 0.824912 | 6.240026e-54 | -8.615850e-47 |
| Msa0591800 | Msa0742180 | 0.826594 | 2.490054e-54 | -8.615850e-47 |
| Msa0591800 | Msa0751890 | 0.800137 | 1.659433e-48 | -8.615850e-47 |
| Msa0591800 | Msa0782230 | 0.805031 | 1.624654e-49 | -8.615850e-47 |
| Msa0591800 | Msa0782240 | 0.855456 | 6.232575e-62 | -8.615850e-47 |
| Msa0591800 | Msa0786040 | 0.853155 | 2.880458e-61 | -8.615850e-47 |
| Msa0591800 | Msa0819890 | 0.812729 | 3.661158e-51 | -8.615850e-47 |
| Msa0591800 | Msa0819900 | 0.828509 | 8.639918e-55 | -8.615850e-47 |
| Msa0591800 | Msa0823400 | 0.839622 | 1.419439e-57 | -8.615850e-47 |
| Msa0591800 | Msa0831940 | 0.800660 | 1.298633e-48 | -8.615850e-47 |
| Msa0591800 | Msa0845940 | 0.824562 | 7.546798e-54 | -8.615850e-47 |
| Msa0591800 | Msa0860160 | 0.805398 | 1.361094e-49 | -8.615850e-47 |
| Msa0591800 | Msa0860170 | 0.870531 | 1.360402e-66 | -8.615850e-47 |
| Msa0591800 | Msa0862310 | 0.856961 | 2.257590e-62 | -8.615850e-47 |
| Msa0591800 | Msa0899950 | 0.843944 | 1.026154e-58 | -8.615850e-47 |
| Msa0591800 | Msa0927120 | 0.847629 | 1.024451e-59 | -8.615850e-47 |
| Msa0591800 | Msa0929870 | 0.816671 | 4.903606e-52 | -8.615850e-47 |
| Msa0591800 | Msa0941820 | 0.809891 | 1.512129e-50 | -8.615850e-47 |
| Msa0591800 | Msa0946210 | 0.863661 | 2.123089e-64 | -8.615850e-47 |
| Msa0591800 | Msa0961560 | 0.838934 | 2.140532e-57 | -8.615850e-47 |
| Msa0591800 | Msa0965310 | 0.863138 | 3.083707e-64 | -8.615850e-47 |
| Msa0591800 | Msa0979510 | 0.823921 | 1.067753e-53 | -8.615850e-47 |
| Msa0591800 | Msa0996270 | 0.837320 | 5.571563e-57 | -8.615850e-47 |
| Msa0591800 | Msa0999320 | 0.812229 | 4.708848e-51 | -8.615850e-47 |
| Msa0591800 | Msa0999340 | 0.906843 | 9.621624e-81 | -8.615850e-47 |
| Msa0591800 | Msa0999350 | 0.873984 | 9.624279e-68 | -8.615850e-47 |
| Msa0591800 | Msa0999360 | 0.820796 | 5.675434e-53 | -8.615850e-47 |
| Msa0591800 | Msa0999390 | 0.901039 | 4.007511e-78 | -8.615850e-47 |
| Msa0591800 | Msa0999400 | 0.868991 | 4.325417e-66 | -8.615850e-47 |
| Msa0591800 | Msa0999410 | 0.823066 | 1.691526e-53 | -8.615850e-47 |
| Msa0591800 | Msa0999700 | 0.857516 | 1.547942e-62 | -8.615850e-47 |
| Msa0591800 | Msa1001870 | 0.810958 | 8.896852e-51 | -8.615850e-47 |
| Msa0591800 | Msa1047990 | 0.851543 | 8.288935e-61 | -8.615850e-47 |
| Msa0591800 | Msa1073340 | 0.807851 | 4.130987e-50 | -8.615850e-47 |
| Msa0591800 | Msa1084520 | 0.851370 | 9.273609e-61 | -8.615850e-47 |
| Msa0591800 | Msa1092020 | 0.863532 | 2.327339e-64 | -8.615850e-47 |
| Msa0591800 | Msa1100140 | 0.814557 | 1.449731e-51 | -8.615850e-47 |
| Msa0591800 | Msa1125810 | 0.823474 | 1.358607e-53 | -8.615850e-47 |
| Msa0591800 | Msa1135380 | 0.854822 | 9.528474e-62 | -8.615850e-47 |
| Msa0591800 | Msa1135520 | 0.800486 | 1.409158e-48 | -8.615850e-47 |
| Msa0591800 | Msa1145020 | 0.812550 | 4.006268e-51 | -8.615850e-47 |
| Msa0591800 | Msa1171310 | 0.849843 | 2.492550e-60 | -8.615850e-47 |
| Msa0591800 | Msa1177400 | 0.846324 | 2.333432e-59 | -8.615850e-47 |
| Msa0591800 | Msa1179360 | 0.856131 | 3.957807e-62 | -8.615850e-47 |
| Msa0591800 | Msa1179520 | 0.818980 | 1.476909e-52 | -8.615850e-47 |
| Msa0591800 | Msa1201160 | 0.826172 | 3.138273e-54 | -8.615850e-47 |
| Msa0591800 | Msa1228190 | 0.862726 | 4.132326e-64 | -8.615850e-47 |
| Msa0591800 | Msa1271260 | 0.861810 | 7.894433e-64 | -8.615850e-47 |
| Msa0591800 | Msa1275250 | 0.806718 | 7.179895e-50 | -8.615850e-47 |
| Msa0591800 | Msa1294290 | 0.832980 | 6.935299e-56 | -8.615850e-47 |
| Msa0591800 | Msa1313750 | 0.811380 | 7.205770e-51 | -8.615850e-47 |
| Msa0591800 | Msa1317170 | 0.815897 | 7.306260e-52 | -8.615850e-47 |
| Msa0591800 | Msa1339440 | 0.828587 | 8.273821e-55 | -8.615850e-47 |
| Msa0591800 | Msa1345420 | 0.836353 | 9.837553e-57 | -8.615850e-47 |
| Msa0591800 | Msa1345430 | 0.824865 | 6.402476e-54 | -8.615850e-47 |
| Msa0591800 | Msa1378870 | 0.812439 | 4.236866e-51 | -8.615850e-47 |
| Msa0591800 | Msa1389050 | 0.863249 | 2.847627e-64 | -8.615850e-47 |
| Msa0591800 | Msa1406780 | 0.800659 | 1.299223e-48 | -8.615850e-47 |
| Msa0591800 | Msa1431850 | 0.811476 | 6.868596e-51 | -8.615850e-47 |
| Msa0591800 | Msa1435480 | 0.874693 | 5.530833e-68 | -8.615850e-47 |
| Msa0591800 | Msa1442630 | 0.816784 | 4.625766e-52 | -8.615850e-47 |
| Msa0591800 | Msa1456730 | 0.844998 | 5.341119e-59 | -8.615850e-47 |
| Msa0591800 | Msa1458910 | 0.861425 | 1.035238e-63 | -8.615850e-47 |
| Msa0591800 | Msa1462530 | 0.861961 | 7.101299e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591800 | MtrunA17_Chr4g0008851 | 62.500 | 72 | 17 | 3 | 30 | 98 | 269 | 333 | 7.32e-23 | 90.5 |
| Msa0591800 | MtrunA17_Chr7g0215961 | 80.000 | 40 | 8 | 0 | 59 | 98 | 280 | 319 | 4.21e-20 | 83.2 |
| Msa0591800 | MtrunA17_Chr7g0274991 | 80.000 | 40 | 8 | 0 | 59 | 98 | 293 | 332 | 5.05e-20 | 82.8 |
| Msa0591800 | MtrunA17_Chr7g0275001 | 55.072 | 69 | 26 | 1 | 30 | 98 | 262 | 325 | 8.58e-20 | 82.0 |
| Msa0591800 | MtrunA17_Chr1g0189931 | 85.000 | 40 | 6 | 0 | 59 | 98 | 292 | 331 | 1.11e-19 | 82.0 |
| Msa0591800 | MtrunA17_Chr7g0228261 | 80.000 | 40 | 8 | 0 | 59 | 98 | 20 | 59 | 3.90e-19 | 75.5 |
| Msa0591800 | MtrunA17_Chr7g0275011 | 68.627 | 51 | 11 | 1 | 48 | 98 | 288 | 333 | 5.81e-19 | 80.1 |
| Msa0591800 | MtrunA17_Chr1g0182811 | 80.000 | 40 | 8 | 0 | 59 | 98 | 295 | 334 | 5.98e-19 | 80.1 |
| Msa0591800 | MtrunA17_Chr7g0275021 | 77.500 | 40 | 9 | 0 | 59 | 98 | 294 | 333 | 1.01e-17 | 76.6 |
| Msa0591800 | MtrunA17_Chr1g0189901 | 72.500 | 40 | 11 | 0 | 59 | 98 | 291 | 330 | 2.17e-16 | 72.8 |
| Msa0591800 | MtrunA17_Chr1g0189911 | 68.889 | 45 | 13 | 1 | 59 | 103 | 74 | 117 | 9.76e-16 | 68.2 |
| Msa0591800 | MtrunA17_Chr6g0457921 | 50.725 | 69 | 29 | 1 | 30 | 98 | 266 | 329 | 1.06e-15 | 70.9 |
| Msa0591800 | MtrunA17_Chr1g0189891 | 69.231 | 39 | 12 | 0 | 60 | 98 | 285 | 323 | 7.25e-14 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591800 | AT5G33370.1 | 65.000 | 60 | 16 | 1 | 44 | 98 | 270 | 329 | 3.99e-21 | 86.3 |
| Msa0591800 | AT3G04290.1 | 85.000 | 40 | 6 | 0 | 59 | 98 | 289 | 328 | 7.48e-20 | 82.8 |
| Msa0591800 | AT5G18430.1 | 57.143 | 63 | 22 | 1 | 41 | 98 | 267 | 329 | 5.20e-18 | 77.8 |
| Msa0591800 | AT4G28780.1 | 70.000 | 40 | 12 | 0 | 59 | 98 | 291 | 330 | 3.55e-15 | 69.7 |
Find 34 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGGGATCTTTATGCATTT+TGG | 0.118559 | 4_2:+16648824 | Msa0591800:CDS |
| CTTCTAACTTGTGCCCTAAT+AGG | 0.217615 | 4_2:+16648806 | Msa0591800:CDS |
| AATGCATAAAGATCCCTATT+AGG | 0.244612 | 4_2:-16648820 | None:intergenic |
| TTTATCAACGATTAGTCTAT+TGG | 0.279659 | 4_2:-16648871 | None:intergenic |
| GACGGTTCCTCCAACTTAAA+AGG | 0.317822 | 4_2:+16646502 | Msa0591800:CDS |
| CAGCGACGCGGGCGTGATCT+TGG | 0.362102 | 4_2:+16646525 | Msa0591800:CDS |
| TTCTAACTTGTGCCCTAATA+GGG | 0.362728 | 4_2:+16648807 | Msa0591800:CDS |
| ATGCATAAAGATCCCTATTA+GGG | 0.388461 | 4_2:-16648819 | None:intergenic |
| CACCTCTCCAATGCTGGAAA+AGG | 0.442114 | 4_2:+16646453 | None:intergenic |
| AGTCTATTGGCTCTTTCTGA+TGG | 0.442836 | 4_2:-16648858 | None:intergenic |
| GCTCTTTCTGATGGATGAAA+GGG | 0.446836 | 4_2:-16648849 | None:intergenic |
| ATTCAAAGCAAGCAACAATC+AGG | 0.467688 | 4_2:+16646591 | Msa0591800:CDS |
| GGCTCTTTCTGATGGATGAA+AGG | 0.468116 | 4_2:-16648850 | None:intergenic |
| CGGATAAAAGCCATACGAAA+GGG | 0.491688 | 4_2:-16646477 | None:intergenic |
| CATAGTCCAACTCCATTGTA+TGG | 0.492410 | 4_2:-16648775 | None:intergenic |
| TAAGTTGGAGGAACCGTCTA+CGG | 0.494732 | 4_2:-16646497 | None:intergenic |
| TGCTTTGAATTCAAACCTGA+GGG | 0.509540 | 4_2:-16646578 | None:intergenic |
| TTCTCATAGAACAGTCCCTC+AGG | 0.513432 | 4_2:+16646563 | Msa0591800:CDS |
| AACTTAAAAGGCAGCGACGC+GGG | 0.526233 | 4_2:+16646514 | Msa0591800:CDS |
| TTAGGGCACAAGTTAGAAGC+TGG | 0.527870 | 4_2:-16648802 | None:intergenic |
| TGTTCTATGAGAATATCATC+TGG | 0.532979 | 4_2:-16646553 | None:intergenic |
| TGGAAAAGGCCCCTTTCGTA+TGG | 0.538776 | 4_2:+16646467 | Msa0591800:CDS |
| GGCGATCAATGCTTCGTACT+CGG | 0.544226 | 4_2:-16646614 | None:intergenic |
| CAAGGACCATACAATGGAGT+TGG | 0.550513 | 4_2:+16648769 | Msa0591800:CDS |
| AAACATGCATGTTGTGGTCA+AGG | 0.555677 | 4_2:+16648751 | Msa0591800:CDS |
| GACGCGGGCGTGATCTTGGA+AGG | 0.569093 | 4_2:+16646529 | Msa0591800:CDS |
| CTCTTTCTGATGGATGAAAG+GGG | 0.589840 | 4_2:-16648848 | None:intergenic |
| TTGCTTTGAATTCAAACCTG+AGG | 0.601275 | 4_2:-16646579 | None:intergenic |
| GAGTACGAAGCATTGATCGC+CGG | 0.608253 | 4_2:+16646616 | Msa0591800:CDS |
| ACGGATAAAAGCCATACGAA+AGG | 0.614364 | 4_2:-16646478 | None:intergenic |
| CAACTTAAAAGGCAGCGACG+CGG | 0.637639 | 4_2:+16646513 | Msa0591800:CDS |
| GGATAAAAGCCATACGAAAG+GGG | 0.642351 | 4_2:-16646476 | None:intergenic |
| ACATCAAAACATGCATGTTG+TGG | 0.666826 | 4_2:+16648745 | Msa0591800:CDS |
| TGTGGTCAAGGACCATACAA+TGG | 0.678040 | 4_2:+16648763 | Msa0591800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTTTAAAAGTAATATTT+TGG | - | chr4_2:16647769-16647788 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAACTTGT+AGG | + | chr4_2:16647988-16648007 | Msa0591800:intron | 10.0% |
| !! | TTGAATATAAATTCATTATA+TGG | - | chr4_2:16648070-16648089 | None:intergenic | 10.0% |
| !! | AAATCTATATAATACATATA+TGG | - | chr4_2:16648221-16648240 | None:intergenic | 10.0% |
| !!! | TTAGTTTAAAAGTAATATTT+TGG | - | chr4_2:16647769-16647788 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAACTTGT+AGG | + | chr4_2:16647988-16648007 | Msa0591800:intron | 10.0% |
| !! | TTGAATATAAATTCATTATA+TGG | - | chr4_2:16648070-16648089 | None:intergenic | 10.0% |
| !! | AAATCTATATAATACATATA+TGG | - | chr4_2:16648221-16648240 | None:intergenic | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4_2:16647792-16647811 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4_2:16647791-16647810 | Msa0591800:intron | 15.0% |
| !!! | AGGTTTTTTTTTTTTTTTGT+AGG | + | chr4_2:16648008-16648027 | Msa0591800:intron | 15.0% |
| !! | ATATATTACTACTACATATT+AGG | - | chr4_2:16648507-16648526 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTTATATATGC+AGG | + | chr4_2:16648715-16648734 | Msa0591800:intron | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4_2:16647792-16647811 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4_2:16647791-16647810 | Msa0591800:intron | 15.0% |
| !!! | AGGTTTTTTTTTTTTTTTGT+AGG | + | chr4_2:16648008-16648027 | Msa0591800:intron | 15.0% |
| !! | ATATATTACTACTACATATT+AGG | - | chr4_2:16648507-16648526 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTTATATATGC+AGG | + | chr4_2:16648715-16648734 | Msa0591800:intron | 15.0% |
| !! | GTATATTTCCAATCTTAATT+TGG | + | chr4_2:16646924-16646943 | Msa0591800:intron | 20.0% |
| !! | AAGTTTAACCAAATTAAGAT+TGG | - | chr4_2:16646935-16646954 | None:intergenic | 20.0% |
| !! | AAACACAAATATTCATCTAT+TGG | + | chr4_2:16646992-16647011 | Msa0591800:intron | 20.0% |
| !! | TATGCTAGATTTAAATTGTT+AGG | + | chr4_2:16647049-16647068 | Msa0591800:intron | 20.0% |
| !!! | TAATTAATATGTTTAGCTCT+TGG | + | chr4_2:16647154-16647173 | Msa0591800:intron | 20.0% |
| !! | TTGATCTACTTTACATTTAA+TGG | - | chr4_2:16647257-16647276 | None:intergenic | 20.0% |
| !! | AAAGTAGATCAATTATGATT+AGG | + | chr4_2:16647265-16647284 | Msa0591800:intron | 20.0% |
| !! | AAGTAGATCAATTATGATTA+GGG | + | chr4_2:16647266-16647285 | Msa0591800:intron | 20.0% |
| !! | GATTCAAATACTATGAAAAA+AGG | - | chr4_2:16647360-16647379 | None:intergenic | 20.0% |
| !!! | TACTCAAACAAAAGTATATA+GGG | - | chr4_2:16647395-16647414 | None:intergenic | 20.0% |
| !!! | ATACTCAAACAAAAGTATAT+AGG | - | chr4_2:16647396-16647415 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4_2:16647706-16647725 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4_2:16647782-16647801 | Msa0591800:intron | 20.0% |
| !! | AATGATTAAGAGAAAGATAA+TGG | - | chr4_2:16647825-16647844 | None:intergenic | 20.0% |
| !! | TTTGCAAAATCACAAAATAA+TGG | - | chr4_2:16648113-16648132 | None:intergenic | 20.0% |
| !! | TGAATTTGTCGTAATTATAA+TGG | + | chr4_2:16648162-16648181 | Msa0591800:intron | 20.0% |
| !! | TACTATATATTGAACCATAT+AGG | - | chr4_2:16648360-16648379 | None:intergenic | 20.0% |
| !! | GTATATTTCCAATCTTAATT+TGG | + | chr4_2:16646924-16646943 | Msa0591800:intron | 20.0% |
| !! | AAGTTTAACCAAATTAAGAT+TGG | - | chr4_2:16646935-16646954 | None:intergenic | 20.0% |
| !! | AAACACAAATATTCATCTAT+TGG | + | chr4_2:16646992-16647011 | Msa0591800:intron | 20.0% |
| !! | TATGCTAGATTTAAATTGTT+AGG | + | chr4_2:16647049-16647068 | Msa0591800:intron | 20.0% |
| !!! | TAATTAATATGTTTAGCTCT+TGG | + | chr4_2:16647154-16647173 | Msa0591800:intron | 20.0% |
| !! | TTGATCTACTTTACATTTAA+TGG | - | chr4_2:16647257-16647276 | None:intergenic | 20.0% |
| !! | AAAGTAGATCAATTATGATT+AGG | + | chr4_2:16647265-16647284 | Msa0591800:intron | 20.0% |
| !! | AAGTAGATCAATTATGATTA+GGG | + | chr4_2:16647266-16647285 | Msa0591800:intron | 20.0% |
| !! | GATTCAAATACTATGAAAAA+AGG | - | chr4_2:16647360-16647379 | None:intergenic | 20.0% |
| !!! | TACTCAAACAAAAGTATATA+GGG | - | chr4_2:16647395-16647414 | None:intergenic | 20.0% |
| !!! | ATACTCAAACAAAAGTATAT+AGG | - | chr4_2:16647396-16647415 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4_2:16647706-16647725 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4_2:16647782-16647801 | Msa0591800:intron | 20.0% |
| !! | AATGATTAAGAGAAAGATAA+TGG | - | chr4_2:16647825-16647844 | None:intergenic | 20.0% |
| !! | TTTGCAAAATCACAAAATAA+TGG | - | chr4_2:16648113-16648132 | None:intergenic | 20.0% |
| !! | TGAATTTGTCGTAATTATAA+TGG | + | chr4_2:16648162-16648181 | Msa0591800:intron | 20.0% |
| !! | TACTATATATTGAACCATAT+AGG | - | chr4_2:16648360-16648379 | None:intergenic | 20.0% |
| !! | TAATCAATTGAACAAGTTGA+GGG | - | chr4_2:16646805-16646824 | None:intergenic | 25.0% |
| ! | TTAATCAATTGAACAAGTTG+AGG | - | chr4_2:16646806-16646825 | None:intergenic | 25.0% |
| ! | TAGATTTAAATTGTTAGGTC+CGG | + | chr4_2:16647054-16647073 | Msa0591800:intron | 25.0% |
| ! | ATTAGATTATCCTAAGATCT+TGG | + | chr4_2:16647192-16647211 | Msa0591800:intron | 25.0% |
| ! | TTAGATTATCCTAAGATCTT+GGG | + | chr4_2:16647193-16647212 | Msa0591800:intron | 25.0% |
| ! | AGTAGATCAATTATGATTAG+GGG | + | chr4_2:16647267-16647286 | Msa0591800:intron | 25.0% |
| ! | TGAGTTAGTATCAAATTGAT+CGG | - | chr4_2:16647314-16647333 | None:intergenic | 25.0% |
| ! | GTTCAAGTGTCATAATTTAA+AGG | + | chr4_2:16647562-16647581 | Msa0591800:intron | 25.0% |
| !!! | AGGGAGTAACATTTTATTTT+AGG | - | chr4_2:16647617-16647636 | None:intergenic | 25.0% |
| !! | TATATTTTCTTGAACGAGTT+GGG | - | chr4_2:16648041-16648060 | None:intergenic | 25.0% |
| ! | AACATAATCCATTTGAATAG+TGG | - | chr4_2:16648428-16648447 | None:intergenic | 25.0% |
| ! | TATGTTGCAATCATGTTAAA+TGG | + | chr4_2:16648442-16648461 | Msa0591800:intron | 25.0% |
| ! | TTACTACTACATATTAGGAA+TGG | - | chr4_2:16648502-16648521 | None:intergenic | 25.0% |
| !!! | AAATGTTTTTTCAATGAGCA+TGG | - | chr4_2:16648555-16648574 | None:intergenic | 25.0% |
| ! | ACCTAAACATCTAAGAAAAT+AGG | + | chr4_2:16648584-16648603 | Msa0591800:intron | 25.0% |
| !! | ACCTATTTTCTTAGATGTTT+AGG | - | chr4_2:16648588-16648607 | None:intergenic | 25.0% |
| !!! | TTTTTTCCACAAACTTTTGT+TGG | + | chr4_2:16648611-16648630 | Msa0591800:intron | 25.0% |
| !! | TAATCAATTGAACAAGTTGA+GGG | - | chr4_2:16646805-16646824 | None:intergenic | 25.0% |
| ! | TTAATCAATTGAACAAGTTG+AGG | - | chr4_2:16646806-16646825 | None:intergenic | 25.0% |
| ! | TAGATTTAAATTGTTAGGTC+CGG | + | chr4_2:16647054-16647073 | Msa0591800:intron | 25.0% |
| ! | ATTAGATTATCCTAAGATCT+TGG | + | chr4_2:16647192-16647211 | Msa0591800:intron | 25.0% |
| ! | TTAGATTATCCTAAGATCTT+GGG | + | chr4_2:16647193-16647212 | Msa0591800:intron | 25.0% |
| ! | AGTAGATCAATTATGATTAG+GGG | + | chr4_2:16647267-16647286 | Msa0591800:intron | 25.0% |
| ! | TGAGTTAGTATCAAATTGAT+CGG | - | chr4_2:16647314-16647333 | None:intergenic | 25.0% |
| ! | GTTCAAGTGTCATAATTTAA+AGG | + | chr4_2:16647562-16647581 | Msa0591800:intron | 25.0% |
| !!! | AGGGAGTAACATTTTATTTT+AGG | - | chr4_2:16647617-16647636 | None:intergenic | 25.0% |
| !! | TATATTTTCTTGAACGAGTT+GGG | - | chr4_2:16648041-16648060 | None:intergenic | 25.0% |
| ! | AACATAATCCATTTGAATAG+TGG | - | chr4_2:16648428-16648447 | None:intergenic | 25.0% |
| ! | TATGTTGCAATCATGTTAAA+TGG | + | chr4_2:16648442-16648461 | Msa0591800:intron | 25.0% |
| ! | TTACTACTACATATTAGGAA+TGG | - | chr4_2:16648502-16648521 | None:intergenic | 25.0% |
| !!! | AAATGTTTTTTCAATGAGCA+TGG | - | chr4_2:16648555-16648574 | None:intergenic | 25.0% |
| ! | ACCTAAACATCTAAGAAAAT+AGG | + | chr4_2:16648584-16648603 | Msa0591800:intron | 25.0% |
| !! | ACCTATTTTCTTAGATGTTT+AGG | - | chr4_2:16648588-16648607 | None:intergenic | 25.0% |
| !!! | TTTTTTCCACAAACTTTTGT+TGG | + | chr4_2:16648611-16648630 | Msa0591800:intron | 25.0% |
| TGTTCTATGAGAATATCATC+TGG | - | chr4_2:16646556-16646575 | None:intergenic | 30.0% | |
| AATCAACTCAATGCTGAAAT+TGG | + | chr4_2:16646824-16646843 | Msa0591800:intron | 30.0% | |
| !! | TTAATATGTTTAGCTCTTGG+TGG | + | chr4_2:16647157-16647176 | Msa0591800:intron | 30.0% |
| TTTGACTAAGTGTAGCTATT+AGG | + | chr4_2:16647229-16647248 | Msa0591800:intron | 30.0% | |
| !! | AAAGTATATAGGGTTAGTCT+AGG | - | chr4_2:16647385-16647404 | None:intergenic | 30.0% |
| ! | GTCACAATGAGTTGAATTTA+TGG | - | chr4_2:16647441-16647460 | None:intergenic | 30.0% |
| ACTCATTGTGACACAAATTA+TGG | + | chr4_2:16647449-16647468 | Msa0591800:intron | 30.0% | |
| GACACAAATTATGGATTTCT+TGG | + | chr4_2:16647458-16647477 | Msa0591800:intron | 30.0% | |
| !! | GTGTAATGTAAGTGTTGAAT+AGG | + | chr4_2:16647522-16647541 | Msa0591800:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr4_2:16647873-16647892 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr4_2:16647874-16647893 | Msa0591800:intron | 30.0% |
| ! | CTATATTTTCTTGAACGAGT+TGG | - | chr4_2:16648042-16648061 | None:intergenic | 30.0% |
| ACACCATTAGAAAAGTAAGA+TGG | + | chr4_2:16648285-16648304 | Msa0591800:intron | 30.0% | |
| AATAATAGTCAAGATTCCAC+TGG | + | chr4_2:16648528-16648547 | Msa0591800:intron | 30.0% | |
| ATGCATAAAGATCCCTATTA+GGG | - | chr4_2:16648822-16648841 | None:intergenic | 30.0% | |
| AATGCATAAAGATCCCTATT+AGG | - | chr4_2:16648823-16648842 | None:intergenic | 30.0% | |
| ! | ATAGGGATCTTTATGCATTT+TGG | + | chr4_2:16648824-16648843 | Msa0591800:CDS | 30.0% |
| TGTTCTATGAGAATATCATC+TGG | - | chr4_2:16646556-16646575 | None:intergenic | 30.0% | |
| AATCAACTCAATGCTGAAAT+TGG | + | chr4_2:16646824-16646843 | Msa0591800:intron | 30.0% | |
| !! | TTAATATGTTTAGCTCTTGG+TGG | + | chr4_2:16647157-16647176 | Msa0591800:intron | 30.0% |
| TTTGACTAAGTGTAGCTATT+AGG | + | chr4_2:16647229-16647248 | Msa0591800:intron | 30.0% | |
| !! | AAAGTATATAGGGTTAGTCT+AGG | - | chr4_2:16647385-16647404 | None:intergenic | 30.0% |
| ! | GTCACAATGAGTTGAATTTA+TGG | - | chr4_2:16647441-16647460 | None:intergenic | 30.0% |
| ACTCATTGTGACACAAATTA+TGG | + | chr4_2:16647449-16647468 | Msa0591800:intron | 30.0% | |
| GACACAAATTATGGATTTCT+TGG | + | chr4_2:16647458-16647477 | Msa0591800:intron | 30.0% | |
| !! | GTGTAATGTAAGTGTTGAAT+AGG | + | chr4_2:16647522-16647541 | Msa0591800:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr4_2:16647873-16647892 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr4_2:16647874-16647893 | Msa0591800:intron | 30.0% |
| ! | CTATATTTTCTTGAACGAGT+TGG | - | chr4_2:16648042-16648061 | None:intergenic | 30.0% |
| ACACCATTAGAAAAGTAAGA+TGG | + | chr4_2:16648285-16648304 | Msa0591800:intron | 30.0% | |
| AATAATAGTCAAGATTCCAC+TGG | + | chr4_2:16648528-16648547 | Msa0591800:intron | 30.0% | |
| ATGCATAAAGATCCCTATTA+GGG | - | chr4_2:16648822-16648841 | None:intergenic | 30.0% | |
| AATGCATAAAGATCCCTATT+AGG | - | chr4_2:16648823-16648842 | None:intergenic | 30.0% | |
| ! | ATAGGGATCTTTATGCATTT+TGG | + | chr4_2:16648824-16648843 | Msa0591800:CDS | 30.0% |
| ! | TGCTTTGAATTCAAACCTGA+GGG | - | chr4_2:16646581-16646600 | None:intergenic | 35.0% |
| ! | TTGCTTTGAATTCAAACCTG+AGG | - | chr4_2:16646582-16646601 | None:intergenic | 35.0% |
| ATTCAAAGCAAGCAACAATC+AGG | + | chr4_2:16646591-16646610 | Msa0591800:CDS | 35.0% | |
| GCATAGATGAAGACATGATT+AGG | - | chr4_2:16646854-16646873 | None:intergenic | 35.0% | |
| ! | AAATGCCTTTGCTATGCATT+TGG | + | chr4_2:16646874-16646893 | Msa0591800:intron | 35.0% |
| GAAATCCAAATGCATAGCAA+AGG | - | chr4_2:16646882-16646901 | None:intergenic | 35.0% | |
| GTTTCTAATCCACAAGCATA+CGG | + | chr4_2:16646902-16646921 | Msa0591800:intron | 35.0% | |
| CAAAAGTTGTTACCTACCTA+GGG | + | chr4_2:16647116-16647135 | Msa0591800:intron | 35.0% | |
| ! | CTCATTCGATTCAAAGTGTT+TGG | + | chr4_2:16647330-16647349 | Msa0591800:intron | 35.0% |
| ! | TTCGATTCAAAGTGTTTGGT+TGG | + | chr4_2:16647334-16647353 | Msa0591800:intron | 35.0% |
| TGTGAATGTAGCTTAAGACA+TGG | + | chr4_2:16647491-16647510 | Msa0591800:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_2:16647640-16647659 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr4_2:16647740-16647759 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr4_2:16647744-16647763 | None:intergenic | 35.0% |
| TGGTAGTCGTCTACATTAAT+GGG | - | chr4_2:16648093-16648112 | None:intergenic | 35.0% | |
| ATGGTAGTCGTCTACATTAA+TGG | - | chr4_2:16648094-16648113 | None:intergenic | 35.0% | |
| !!! | CTTTTCTAATGGTGTTACAG+TGG | - | chr4_2:16648280-16648299 | None:intergenic | 35.0% |
| !! | TGGCCATCTTACTTTTCTAA+TGG | - | chr4_2:16648291-16648310 | None:intergenic | 35.0% |
| ATCCATTTGAATAGTGGTTG+TGG | - | chr4_2:16648422-16648441 | None:intergenic | 35.0% | |
| TGCAATCATGTTAAATGGTG+TGG | + | chr4_2:16648447-16648466 | Msa0591800:intron | 35.0% | |
| GCAATCATGTTAAATGGTGT+GGG | + | chr4_2:16648448-16648467 | Msa0591800:intron | 35.0% | |
| CAATCATGTTAAATGGTGTG+GGG | + | chr4_2:16648449-16648468 | Msa0591800:intron | 35.0% | |
| AATCATGTTAAATGGTGTGG+GGG | + | chr4_2:16648450-16648469 | Msa0591800:intron | 35.0% | |
| ACTATGCCAACAAAAGTTTG+TGG | - | chr4_2:16648620-16648639 | None:intergenic | 35.0% | |
| ACATCAAAACATGCATGTTG+TGG | + | chr4_2:16648745-16648764 | Msa0591800:CDS | 35.0% | |
| ! | TTCTAACTTGTGCCCTAATA+GGG | + | chr4_2:16648807-16648826 | Msa0591800:CDS | 35.0% |
| ! | TGCTTTGAATTCAAACCTGA+GGG | - | chr4_2:16646581-16646600 | None:intergenic | 35.0% |
| ! | TTGCTTTGAATTCAAACCTG+AGG | - | chr4_2:16646582-16646601 | None:intergenic | 35.0% |
| ATTCAAAGCAAGCAACAATC+AGG | + | chr4_2:16646591-16646610 | Msa0591800:CDS | 35.0% | |
| GCATAGATGAAGACATGATT+AGG | - | chr4_2:16646854-16646873 | None:intergenic | 35.0% | |
| ! | AAATGCCTTTGCTATGCATT+TGG | + | chr4_2:16646874-16646893 | Msa0591800:intron | 35.0% |
| GAAATCCAAATGCATAGCAA+AGG | - | chr4_2:16646882-16646901 | None:intergenic | 35.0% | |
| GTTTCTAATCCACAAGCATA+CGG | + | chr4_2:16646902-16646921 | Msa0591800:intron | 35.0% | |
| CAAAAGTTGTTACCTACCTA+GGG | + | chr4_2:16647116-16647135 | Msa0591800:intron | 35.0% | |
| ! | CTCATTCGATTCAAAGTGTT+TGG | + | chr4_2:16647330-16647349 | Msa0591800:intron | 35.0% |
| ! | TTCGATTCAAAGTGTTTGGT+TGG | + | chr4_2:16647334-16647353 | Msa0591800:intron | 35.0% |
| TGTGAATGTAGCTTAAGACA+TGG | + | chr4_2:16647491-16647510 | Msa0591800:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_2:16647640-16647659 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr4_2:16647740-16647759 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr4_2:16647744-16647763 | None:intergenic | 35.0% |
| TGGTAGTCGTCTACATTAAT+GGG | - | chr4_2:16648093-16648112 | None:intergenic | 35.0% | |
| ATGGTAGTCGTCTACATTAA+TGG | - | chr4_2:16648094-16648113 | None:intergenic | 35.0% | |
| !!! | CTTTTCTAATGGTGTTACAG+TGG | - | chr4_2:16648280-16648299 | None:intergenic | 35.0% |
| !! | TGGCCATCTTACTTTTCTAA+TGG | - | chr4_2:16648291-16648310 | None:intergenic | 35.0% |
| ATCCATTTGAATAGTGGTTG+TGG | - | chr4_2:16648422-16648441 | None:intergenic | 35.0% | |
| TGCAATCATGTTAAATGGTG+TGG | + | chr4_2:16648447-16648466 | Msa0591800:intron | 35.0% | |
| GCAATCATGTTAAATGGTGT+GGG | + | chr4_2:16648448-16648467 | Msa0591800:intron | 35.0% | |
| CAATCATGTTAAATGGTGTG+GGG | + | chr4_2:16648449-16648468 | Msa0591800:intron | 35.0% | |
| AATCATGTTAAATGGTGTGG+GGG | + | chr4_2:16648450-16648469 | Msa0591800:intron | 35.0% | |
| ACTATGCCAACAAAAGTTTG+TGG | - | chr4_2:16648620-16648639 | None:intergenic | 35.0% | |
| ACATCAAAACATGCATGTTG+TGG | + | chr4_2:16648745-16648764 | Msa0591800:CDS | 35.0% | |
| ! | TTCTAACTTGTGCCCTAATA+GGG | + | chr4_2:16648807-16648826 | Msa0591800:CDS | 35.0% |
| GGATAAAAGCCATACGAAAG+GGG | - | chr4_2:16646479-16646498 | None:intergenic | 40.0% | |
| CGGATAAAAGCCATACGAAA+GGG | - | chr4_2:16646480-16646499 | None:intergenic | 40.0% | |
| ACGGATAAAAGCCATACGAA+AGG | - | chr4_2:16646481-16646500 | None:intergenic | 40.0% | |
| ! | GTATGGCTTTTATCCGTAGA+CGG | + | chr4_2:16646484-16646503 | Msa0591800:CDS | 40.0% |
| ATGACCTTAACACAGGAGAT+GGG | + | chr4_2:16646640-16646659 | Msa0591800:intron | 40.0% | |
| CAACTCAATGCTGAAATTGG+TGG | + | chr4_2:16646827-16646846 | Msa0591800:intron | 40.0% | |
| GGAAATATACCGTATGCTTG+TGG | - | chr4_2:16646914-16646933 | None:intergenic | 40.0% | |
| GCTTCTAACTAACATGACCA+GGG | - | chr4_2:16647080-16647099 | None:intergenic | 40.0% | |
| TGCTTCTAACTAACATGACC+AGG | - | chr4_2:16647081-16647100 | None:intergenic | 40.0% | |
| ! | CCTAGGTAGGTAACAACTTT+TGG | - | chr4_2:16647118-16647137 | None:intergenic | 40.0% |
| CCAAAAGTTGTTACCTACCT+AGG | + | chr4_2:16647115-16647134 | Msa0591800:intron | 40.0% | |
| ATAAAGACCAAACCCTAGGT+AGG | - | chr4_2:16647131-16647150 | None:intergenic | 40.0% | |
| AGACATAAAGACCAAACCCT+AGG | - | chr4_2:16647135-16647154 | None:intergenic | 40.0% | |
| ATCCTAAGATCTTGGGATAG+TGG | + | chr4_2:16647200-16647219 | Msa0591800:intron | 40.0% | |
| ATCCACTATCCCAAGATCTT+AGG | - | chr4_2:16647205-16647224 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_2:16647878-16647897 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr4_2:16647741-16647760 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_2:16647878-16647897 | Msa0591800:intron | 40.0% |
| AACCTAACCACGCAATATCT+TGG | + | chr4_2:16647958-16647977 | Msa0591800:intron | 40.0% | |
| ATCCAAGATATTGCGTGGTT+AGG | - | chr4_2:16647963-16647982 | None:intergenic | 40.0% | |
| GTCAAATCCAAGATATTGCG+TGG | - | chr4_2:16647968-16647987 | None:intergenic | 40.0% | |
| TAGAAAAGTAAGATGGCCAC+CGG | + | chr4_2:16648292-16648311 | Msa0591800:intron | 40.0% | |
| GTCCACAACCACTATTCAAA+TGG | + | chr4_2:16648417-16648436 | Msa0591800:intron | 40.0% | |
| !! | TGTGGGGGAAATTGACTTTT+GGG | + | chr4_2:16648465-16648484 | Msa0591800:intron | 40.0% |
| !! | AATTGACTTTTGGGGACCAA+AGG | + | chr4_2:16648474-16648493 | Msa0591800:intron | 40.0% |
| !! | ATTGACTTTTGGGGACCAAA+GGG | + | chr4_2:16648475-16648494 | Msa0591800:intron | 40.0% |
| CATATTAGGAATGGTCCCTT+TGG | - | chr4_2:16648493-16648512 | None:intergenic | 40.0% | |
| AAACATGCATGTTGTGGTCA+AGG | + | chr4_2:16648751-16648770 | Msa0591800:CDS | 40.0% | |
| CATAGTCCAACTCCATTGTA+TGG | - | chr4_2:16648778-16648797 | None:intergenic | 40.0% | |
| ! | CTTCTAACTTGTGCCCTAAT+AGG | + | chr4_2:16648806-16648825 | Msa0591800:CDS | 40.0% |
| ! | CTCTTTCTGATGGATGAAAG+GGG | - | chr4_2:16648851-16648870 | None:intergenic | 40.0% |
| ! | GCTCTTTCTGATGGATGAAA+GGG | - | chr4_2:16648852-16648871 | None:intergenic | 40.0% |
| !! | AGTCTATTGGCTCTTTCTGA+TGG | - | chr4_2:16648861-16648880 | None:intergenic | 40.0% |
| GGATAAAAGCCATACGAAAG+GGG | - | chr4_2:16646479-16646498 | None:intergenic | 40.0% | |
| CGGATAAAAGCCATACGAAA+GGG | - | chr4_2:16646480-16646499 | None:intergenic | 40.0% | |
| ACGGATAAAAGCCATACGAA+AGG | - | chr4_2:16646481-16646500 | None:intergenic | 40.0% | |
| ! | GTATGGCTTTTATCCGTAGA+CGG | + | chr4_2:16646484-16646503 | Msa0591800:CDS | 40.0% |
| ATGACCTTAACACAGGAGAT+GGG | + | chr4_2:16646640-16646659 | Msa0591800:intron | 40.0% | |
| CAACTCAATGCTGAAATTGG+TGG | + | chr4_2:16646827-16646846 | Msa0591800:intron | 40.0% | |
| GGAAATATACCGTATGCTTG+TGG | - | chr4_2:16646914-16646933 | None:intergenic | 40.0% | |
| GCTTCTAACTAACATGACCA+GGG | - | chr4_2:16647080-16647099 | None:intergenic | 40.0% | |
| TGCTTCTAACTAACATGACC+AGG | - | chr4_2:16647081-16647100 | None:intergenic | 40.0% | |
| ! | CCTAGGTAGGTAACAACTTT+TGG | - | chr4_2:16647118-16647137 | None:intergenic | 40.0% |
| CCAAAAGTTGTTACCTACCT+AGG | + | chr4_2:16647115-16647134 | Msa0591800:intron | 40.0% | |
| ATAAAGACCAAACCCTAGGT+AGG | - | chr4_2:16647131-16647150 | None:intergenic | 40.0% | |
| AGACATAAAGACCAAACCCT+AGG | - | chr4_2:16647135-16647154 | None:intergenic | 40.0% | |
| ATCCTAAGATCTTGGGATAG+TGG | + | chr4_2:16647200-16647219 | Msa0591800:intron | 40.0% | |
| ATCCACTATCCCAAGATCTT+AGG | - | chr4_2:16647205-16647224 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_2:16647878-16647897 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr4_2:16647741-16647760 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_2:16647878-16647897 | Msa0591800:intron | 40.0% |
| AACCTAACCACGCAATATCT+TGG | + | chr4_2:16647958-16647977 | Msa0591800:intron | 40.0% | |
| ATCCAAGATATTGCGTGGTT+AGG | - | chr4_2:16647963-16647982 | None:intergenic | 40.0% | |
| GTCAAATCCAAGATATTGCG+TGG | - | chr4_2:16647968-16647987 | None:intergenic | 40.0% | |
| TAGAAAAGTAAGATGGCCAC+CGG | + | chr4_2:16648292-16648311 | Msa0591800:intron | 40.0% | |
| GTCCACAACCACTATTCAAA+TGG | + | chr4_2:16648417-16648436 | Msa0591800:intron | 40.0% | |
| !! | TGTGGGGGAAATTGACTTTT+GGG | + | chr4_2:16648465-16648484 | Msa0591800:intron | 40.0% |
| !! | AATTGACTTTTGGGGACCAA+AGG | + | chr4_2:16648474-16648493 | Msa0591800:intron | 40.0% |
| !! | ATTGACTTTTGGGGACCAAA+GGG | + | chr4_2:16648475-16648494 | Msa0591800:intron | 40.0% |
| CATATTAGGAATGGTCCCTT+TGG | - | chr4_2:16648493-16648512 | None:intergenic | 40.0% | |
| AAACATGCATGTTGTGGTCA+AGG | + | chr4_2:16648751-16648770 | Msa0591800:CDS | 40.0% | |
| CATAGTCCAACTCCATTGTA+TGG | - | chr4_2:16648778-16648797 | None:intergenic | 40.0% | |
| ! | CTTCTAACTTGTGCCCTAAT+AGG | + | chr4_2:16648806-16648825 | Msa0591800:CDS | 40.0% |
| ! | CTCTTTCTGATGGATGAAAG+GGG | - | chr4_2:16648851-16648870 | None:intergenic | 40.0% |
| ! | GCTCTTTCTGATGGATGAAA+GGG | - | chr4_2:16648852-16648871 | None:intergenic | 40.0% |
| !! | AGTCTATTGGCTCTTTCTGA+TGG | - | chr4_2:16648861-16648880 | None:intergenic | 40.0% |
| ! | TAAGTTGGAGGAACCGTCTA+CGG | - | chr4_2:16646500-16646519 | None:intergenic | 45.0% |
| GACGGTTCCTCCAACTTAAA+AGG | + | chr4_2:16646502-16646521 | Msa0591800:CDS | 45.0% | |
| TTCTCATAGAACAGTCCCTC+AGG | + | chr4_2:16646563-16646582 | Msa0591800:CDS | 45.0% | |
| CATGACCTTAACACAGGAGA+TGG | + | chr4_2:16646639-16646658 | Msa0591800:intron | 45.0% | |
| GTTGTTACCTACCTAGGGTT+TGG | + | chr4_2:16647121-16647140 | Msa0591800:intron | 45.0% | |
| !! | ATGTTTAGCTCTTGGTGGCT+AGG | + | chr4_2:16647162-16647181 | Msa0591800:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_2:16647877-16647896 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4_2:16647877-16647896 | Msa0591800:intron | 45.0% |
| GTGGTTAGGTTTGAGTCAAG+TGG | - | chr4_2:16647949-16647968 | None:intergenic | 45.0% | |
| ! | TGAATAGTGGTTGTGGACTG+TGG | - | chr4_2:16648415-16648434 | None:intergenic | 45.0% |
| !! | GTGTGGGGGAAATTGACTTT+TGG | + | chr4_2:16648464-16648483 | Msa0591800:intron | 45.0% |
| !! | GTGGGGGAAATTGACTTTTG+GGG | + | chr4_2:16648466-16648485 | Msa0591800:intron | 45.0% |
| TTTCAATGAGCATGGTCCAG+TGG | - | chr4_2:16648547-16648566 | None:intergenic | 45.0% | |
| TGTGGTCAAGGACCATACAA+TGG | + | chr4_2:16648763-16648782 | Msa0591800:CDS | 45.0% | |
| CAAGGACCATACAATGGAGT+TGG | + | chr4_2:16648769-16648788 | Msa0591800:CDS | 45.0% | |
| TTAGGGCACAAGTTAGAAGC+TGG | - | chr4_2:16648805-16648824 | None:intergenic | 45.0% | |
| ! | GGCTCTTTCTGATGGATGAA+AGG | - | chr4_2:16648853-16648872 | None:intergenic | 45.0% |
| ! | TAAGTTGGAGGAACCGTCTA+CGG | - | chr4_2:16646500-16646519 | None:intergenic | 45.0% |
| GACGGTTCCTCCAACTTAAA+AGG | + | chr4_2:16646502-16646521 | Msa0591800:CDS | 45.0% | |
| TTCTCATAGAACAGTCCCTC+AGG | + | chr4_2:16646563-16646582 | Msa0591800:CDS | 45.0% | |
| CATGACCTTAACACAGGAGA+TGG | + | chr4_2:16646639-16646658 | Msa0591800:intron | 45.0% | |
| GTTGTTACCTACCTAGGGTT+TGG | + | chr4_2:16647121-16647140 | Msa0591800:intron | 45.0% | |
| !! | ATGTTTAGCTCTTGGTGGCT+AGG | + | chr4_2:16647162-16647181 | Msa0591800:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_2:16647877-16647896 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4_2:16647877-16647896 | Msa0591800:intron | 45.0% |
| GTGGTTAGGTTTGAGTCAAG+TGG | - | chr4_2:16647949-16647968 | None:intergenic | 45.0% | |
| ! | TGAATAGTGGTTGTGGACTG+TGG | - | chr4_2:16648415-16648434 | None:intergenic | 45.0% |
| !! | GTGTGGGGGAAATTGACTTT+TGG | + | chr4_2:16648464-16648483 | Msa0591800:intron | 45.0% |
| !! | GTGGGGGAAATTGACTTTTG+GGG | + | chr4_2:16648466-16648485 | Msa0591800:intron | 45.0% |
| TTTCAATGAGCATGGTCCAG+TGG | - | chr4_2:16648547-16648566 | None:intergenic | 45.0% | |
| TGTGGTCAAGGACCATACAA+TGG | + | chr4_2:16648763-16648782 | Msa0591800:CDS | 45.0% | |
| CAAGGACCATACAATGGAGT+TGG | + | chr4_2:16648769-16648788 | Msa0591800:CDS | 45.0% | |
| TTAGGGCACAAGTTAGAAGC+TGG | - | chr4_2:16648805-16648824 | None:intergenic | 45.0% | |
| ! | GGCTCTTTCTGATGGATGAA+AGG | - | chr4_2:16648853-16648872 | None:intergenic | 45.0% |
| TGGAAAAGGCCCCTTTCGTA+TGG | + | chr4_2:16646467-16646486 | Msa0591800:CDS | 50.0% | |
| !!! | GTCGCTGCCTTTTAAGTTGG+AGG | - | chr4_2:16646512-16646531 | None:intergenic | 50.0% |
| CAACTTAAAAGGCAGCGACG+CGG | + | chr4_2:16646513-16646532 | Msa0591800:CDS | 50.0% | |
| AACTTAAAAGGCAGCGACGC+GGG | + | chr4_2:16646514-16646533 | Msa0591800:CDS | 50.0% | |
| GGCGATCAATGCTTCGTACT+CGG | - | chr4_2:16646617-16646636 | None:intergenic | 50.0% | |
| !! | GAGTACGAAGCATTGATCGC+CGG | + | chr4_2:16646616-16646635 | Msa0591800:CDS | 50.0% |
| CTCCTGTGTTAAGGTCATGC+CGG | - | chr4_2:16646638-16646657 | None:intergenic | 50.0% | |
| AGCTCCCATCTCCTGTGTTA+AGG | - | chr4_2:16646647-16646666 | None:intergenic | 50.0% | |
| TAAATTGTTAGGTCCGGCCC+TGG | + | chr4_2:16647060-16647079 | Msa0591800:intron | 50.0% | |
| CTAACTAACATGACCAGGGC+CGG | - | chr4_2:16647076-16647095 | None:intergenic | 50.0% | |
| !! | ATTAGGGGTGCTTGTGCAGA+TGG | + | chr4_2:16647282-16647301 | Msa0591800:intron | 50.0% |
| !! | TTAGGGGTGCTTGTGCAGAT+GGG | + | chr4_2:16647283-16647302 | Msa0591800:intron | 50.0% |
| TGTGTGTCCGTAGAGCTCAT+GGG | + | chr4_2:16648328-16648347 | Msa0591800:intron | 50.0% | |
| TGGAAAAGGCCCCTTTCGTA+TGG | + | chr4_2:16646467-16646486 | Msa0591800:CDS | 50.0% | |
| !!! | GTCGCTGCCTTTTAAGTTGG+AGG | - | chr4_2:16646512-16646531 | None:intergenic | 50.0% |
| CAACTTAAAAGGCAGCGACG+CGG | + | chr4_2:16646513-16646532 | Msa0591800:CDS | 50.0% | |
| AACTTAAAAGGCAGCGACGC+GGG | + | chr4_2:16646514-16646533 | Msa0591800:CDS | 50.0% | |
| GGCGATCAATGCTTCGTACT+CGG | - | chr4_2:16646617-16646636 | None:intergenic | 50.0% | |
| !! | GAGTACGAAGCATTGATCGC+CGG | + | chr4_2:16646616-16646635 | Msa0591800:CDS | 50.0% |
| CTCCTGTGTTAAGGTCATGC+CGG | - | chr4_2:16646638-16646657 | None:intergenic | 50.0% | |
| AGCTCCCATCTCCTGTGTTA+AGG | - | chr4_2:16646647-16646666 | None:intergenic | 50.0% | |
| TAAATTGTTAGGTCCGGCCC+TGG | + | chr4_2:16647060-16647079 | Msa0591800:intron | 50.0% | |
| CTAACTAACATGACCAGGGC+CGG | - | chr4_2:16647076-16647095 | None:intergenic | 50.0% | |
| !! | ATTAGGGGTGCTTGTGCAGA+TGG | + | chr4_2:16647282-16647301 | Msa0591800:intron | 50.0% |
| !! | TTAGGGGTGCTTGTGCAGAT+GGG | + | chr4_2:16647283-16647302 | Msa0591800:intron | 50.0% |
| TGTGTGTCCGTAGAGCTCAT+GGG | + | chr4_2:16648328-16648347 | Msa0591800:intron | 50.0% | |
| !! | CGCGTCGCTGCCTTTTAAGT+TGG | - | chr4_2:16646515-16646534 | None:intergenic | 55.0% |
| TAAGATGGCCACCGGAGCAA+TGG | + | chr4_2:16648300-16648319 | Msa0591800:intron | 55.0% | |
| CACACACAAGGCCATTGCTC+CGG | - | chr4_2:16648314-16648333 | None:intergenic | 55.0% | |
| GAGCTCTACGGACACACACA+AGG | - | chr4_2:16648326-16648345 | None:intergenic | 55.0% | |
| GTGTGTGTCCGTAGAGCTCA+TGG | + | chr4_2:16648327-16648346 | Msa0591800:intron | 55.0% | |
| TGTCCGTAGAGCTCATGGGT+TGG | + | chr4_2:16648332-16648351 | Msa0591800:intron | 55.0% | |
| GTCCGTAGAGCTCATGGGTT+GGG | + | chr4_2:16648333-16648352 | Msa0591800:intron | 55.0% | |
| ! | TCCGTAGAGCTCATGGGTTG+GGG | + | chr4_2:16648334-16648353 | Msa0591800:intron | 55.0% |
| !! | CTCATGGGTTGGGGCCTATA+TGG | + | chr4_2:16648343-16648362 | Msa0591800:intron | 55.0% |
| !! | CGCGTCGCTGCCTTTTAAGT+TGG | - | chr4_2:16646515-16646534 | None:intergenic | 55.0% |
| TAAGATGGCCACCGGAGCAA+TGG | + | chr4_2:16648300-16648319 | Msa0591800:intron | 55.0% | |
| CACACACAAGGCCATTGCTC+CGG | - | chr4_2:16648314-16648333 | None:intergenic | 55.0% | |
| GAGCTCTACGGACACACACA+AGG | - | chr4_2:16648326-16648345 | None:intergenic | 55.0% | |
| GTGTGTGTCCGTAGAGCTCA+TGG | + | chr4_2:16648327-16648346 | Msa0591800:intron | 55.0% | |
| TGTCCGTAGAGCTCATGGGT+TGG | + | chr4_2:16648332-16648351 | Msa0591800:intron | 55.0% | |
| GTCCGTAGAGCTCATGGGTT+GGG | + | chr4_2:16648333-16648352 | Msa0591800:intron | 55.0% | |
| ! | TCCGTAGAGCTCATGGGTTG+GGG | + | chr4_2:16648334-16648353 | Msa0591800:intron | 55.0% |
| !! | CTCATGGGTTGGGGCCTATA+TGG | + | chr4_2:16648343-16648362 | Msa0591800:intron | 55.0% |
| CGCCGGCATGACCTTAACAC+AGG | + | chr4_2:16646633-16646652 | Msa0591800:intron | 60.0% | |
| ACACAAGGCCATTGCTCCGG+TGG | - | chr4_2:16648311-16648330 | None:intergenic | 60.0% | |
| GCCCCAACCCATGAGCTCTA+CGG | - | chr4_2:16648338-16648357 | None:intergenic | 60.0% | |
| CGCCGGCATGACCTTAACAC+AGG | + | chr4_2:16646633-16646652 | Msa0591800:intron | 60.0% | |
| ACACAAGGCCATTGCTCCGG+TGG | - | chr4_2:16648311-16648330 | None:intergenic | 60.0% | |
| GCCCCAACCCATGAGCTCTA+CGG | - | chr4_2:16648338-16648357 | None:intergenic | 60.0% | |
| GACGCGGGCGTGATCTTGGA+AGG | + | chr4_2:16646529-16646548 | Msa0591800:CDS | 65.0% | |
| GACGCGGGCGTGATCTTGGA+AGG | + | chr4_2:16646529-16646548 | Msa0591800:CDS | 65.0% | |
| CAGCGACGCGGGCGTGATCT+TGG | + | chr4_2:16646525-16646544 | Msa0591800:CDS | 70.0% | |
| CAGCGACGCGGGCGTGATCT+TGG | + | chr4_2:16646525-16646544 | Msa0591800:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 16646463 | 16648882 | 16646463 | ID=Msa0591800;Name=Msa0591800 |
| chr4_2 | mRNA | 16646463 | 16648882 | 16646463 | ID=Msa0591800-mRNA-1;Parent=Msa0591800;Name=Msa0591800-mRNA-1;_AED=0.74;_eAED=0.74;_QI=0|0|0|0.5|1|1|2|0|106 |
| chr4_2 | exon | 16646463 | 16646637 | 16646463 | ID=Msa0591800-mRNA-1:exon:4791;Parent=Msa0591800-mRNA-1 |
| chr4_2 | exon | 16648737 | 16648882 | 16648737 | ID=Msa0591800-mRNA-1:exon:4792;Parent=Msa0591800-mRNA-1 |
| chr4_2 | CDS | 16646463 | 16646637 | 16646463 | ID=Msa0591800-mRNA-1:cds;Parent=Msa0591800-mRNA-1 |
| chr4_2 | CDS | 16648737 | 16648882 | 16648737 | ID=Msa0591800-mRNA-1:cds;Parent=Msa0591800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
