AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1462530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1462530 MtrunA17_Chr7g0215961 96.067 356 14 0 1 356 1 356 0.0 707
Msa1462530 MtrunA17_Chr7g0275021 68.649 370 102 2 1 356 1 370 0.0 536
Msa1462530 MtrunA17_Chr6g0457921 66.846 371 103 4 1 356 1 366 0.0 507
Msa1462530 MtrunA17_Chr7g0275011 65.668 367 110 2 1 354 5 368 0.0 506
Msa1462530 MtrunA17_Chr7g0274991 65.840 363 108 3 7 356 10 369 8.79e-175 490
Msa1462530 MtrunA17_Chr1g0189931 65.672 335 102 1 32 353 31 365 7.74e-172 483
Msa1462530 MtrunA17_Chr7g0275001 66.374 342 101 2 29 356 21 362 4.08e-168 473
Msa1462530 MtrunA17_Chr1g0189901 63.798 337 109 1 31 354 29 365 7.43e-167 470
Msa1462530 MtrunA17_Chr4g0008851 62.500 360 118 3 12 356 13 370 1.11e-163 462
Msa1462530 MtrunA17_Chr1g0182811 57.895 361 132 4 11 356 16 371 3.96e-156 443
Msa1462530 MtrunA17_Chr1g0189891 58.356 365 126 4 8 354 2 358 4.13e-154 437
Msa1462530 MtrunA17_Chr8g0374101 39.296 341 185 8 33 352 37 376 2.62e-76 239
Msa1462530 MtrunA17_Chr4g0068441 38.602 329 186 7 33 346 35 362 2.92e-71 226
Msa1462530 MtrunA17_Chr2g0294311 35.756 344 197 5 30 350 29 371 5.33e-68 218
Msa1462530 MtrunA17_Chr3g0077571 34.758 351 215 6 12 352 11 357 5.75e-67 215
Msa1462530 MtrunA17_Chr3g0131321 35.455 330 197 3 33 346 34 363 8.85e-67 215
Msa1462530 MtrunA17_Chr2g0294301 35.015 337 201 5 30 350 32 366 7.74e-66 212
Msa1462530 MtrunA17_Chr5g0444401 34.513 339 197 6 33 351 28 361 1.35e-65 211
Msa1462530 MtrunA17_Chr5g0434621 34.513 339 202 6 11 335 6 338 5.78e-65 209
Msa1462530 MtrunA17_Chr3g0099161 33.511 376 210 10 1 352 67 426 5.56e-63 206
Msa1462530 MtrunA17_Chr5g0438621 33.036 336 203 7 10 326 4 336 5.41e-62 202
Msa1462530 MtrunA17_Chr8g0380041 31.956 363 230 8 6 352 2 363 2.13e-60 198
Msa1462530 MtrunA17_Chr4g0017431 33.053 357 223 4 11 352 8 363 5.88e-60 197
Msa1462530 MtrunA17_Chr3g0086641 34.848 330 197 8 16 329 19 346 1.56e-59 196
Msa1462530 MtrunA17_Chr2g0285061 33.038 339 208 6 6 329 7 341 2.05e-59 196
Msa1462530 MtrunA17_Chr3g0099231 32.425 367 214 9 5 350 6 359 2.18e-59 196
Msa1462530 MtrunA17_Chr3g0099151 33.429 350 200 9 28 352 81 422 2.34e-59 197
Msa1462530 MtrunA17_Chr1g0189911 57.534 146 61 1 209 353 2 147 1.67e-58 186
Msa1462530 MtrunA17_Chr2g0320671 33.623 345 202 7 6 334 11 344 1.51e-57 190
Msa1462530 MtrunA17_Chr3g0120861 32.209 326 202 6 28 337 33 355 3.66e-57 189
Msa1462530 MtrunA17_Chr1g0156891 33.618 351 213 7 1 334 10 357 1.13e-56 188
Msa1462530 MtrunA17_Chr3g0105401 31.672 341 208 7 10 334 12 343 2.21e-56 187
Msa1462530 MtrunA17_Chr5g0438641 31.686 344 208 8 8 334 13 346 4.36e-56 186
Msa1462530 MtrunA17_Chr3g0077581 32.970 367 223 8 6 352 7 370 9.79e-56 186
Msa1462530 MtrunA17_Chr2g0301641 32.172 373 217 9 7 353 16 378 1.79e-55 186
Msa1462530 MtrunA17_Chr5g0438631 32.440 336 207 6 11 329 6 338 2.59e-55 184
Msa1462530 MtrunA17_Chr2g0330781 33.230 322 189 7 33 334 31 346 2.65e-55 184
Msa1462530 MtrunA17_Chr3g0085881 34.125 337 197 9 27 350 27 351 3.17e-55 184
Msa1462530 MtrunA17_Chr8g0341001 31.487 343 211 8 10 334 11 347 3.59e-55 184
Msa1462530 MtrunA17_Chr1g0156921 31.180 356 212 9 8 341 16 360 4.28e-55 184
Msa1462530 MtrunA17_Chr3g0092131 32.635 334 208 6 16 334 6 337 5.02e-55 184
Msa1462530 MtrunA17_Chr8g0371491 32.665 349 209 8 10 339 14 355 5.65e-54 181
Msa1462530 MtrunA17_Chr2g0283191 33.239 352 193 10 6 325 11 352 6.44e-54 181
Msa1462530 MtrunA17_Chr4g0046151 33.696 368 195 13 6 336 11 366 2.72e-53 179
Msa1462530 MtrunA17_Chr1g0156931 30.812 357 218 8 4 341 11 357 4.94e-53 179
Msa1462530 MtrunA17_Chr4g0060811 33.333 315 193 5 35 334 29 341 8.79e-53 178
Msa1462530 MtrunA17_Chr8g0371481 33.125 320 194 8 33 335 41 357 9.05e-53 178
Msa1462530 MtrunA17_Chr1g0156901 34.251 327 188 7 33 341 50 367 5.67e-52 176
Msa1462530 MtrunA17_Chr5g0396511 29.909 331 216 4 35 350 48 377 1.78e-51 175
Msa1462530 MtrunA17_Chr5g0432101 30.086 349 223 7 1 331 1 346 1.99e-51 175
Msa1462530 MtrunA17_Chr8g0371471 31.579 323 194 9 33 335 41 356 3.00e-49 169
Msa1462530 MtrunA17_Chr5g0405831 30.581 327 201 8 33 339 43 363 3.98e-49 169
Msa1462530 MtrunA17_Chr1g0157001 33.535 331 195 8 38 350 41 364 4.04e-49 169
Msa1462530 MtrunA17_Chr4g0027521 31.180 356 213 9 1 335 1 345 2.10e-48 166
Msa1462530 MtrunA17_Chr5g0405821 30.816 331 196 10 33 339 43 364 6.34e-48 166
Msa1462530 MtrunA17_Chr1g0156911 30.625 320 198 6 29 330 33 346 4.70e-47 163
Msa1462530 MtrunA17_Chr7g0228261 72.340 94 26 0 261 354 1 94 7.84e-47 154
Msa1462530 MtrunA17_Chr3g0142941 29.375 320 202 6 33 334 47 360 3.44e-46 161
Msa1462530 MtrunA17_Chr8g0349341 31.818 352 207 12 20 351 26 364 6.78e-46 160
Msa1462530 MtrunA17_Chr2g0284951 31.176 340 205 9 27 350 27 353 9.48e-46 160
Msa1462530 MtrunA17_Chr8g0370951 29.891 368 228 10 7 350 5 366 9.65e-46 160
Msa1462530 MtrunA17_Chr2g0285001 30.814 344 209 9 26 350 26 359 1.77e-45 159
Msa1462530 MtrunA17_Chr8g0344931 31.085 341 204 10 30 352 34 361 4.33e-45 158
Msa1462530 MtrunA17_Chr8g0380031 29.118 340 216 6 27 352 78 406 1.31e-44 158
Msa1462530 MtrunA17_Chr8g0349321 29.380 371 224 11 6 351 7 364 6.07e-44 155
Msa1462530 MtrunA17_Chr3g0142921 31.392 309 193 6 33 325 36 341 7.57e-44 154
Msa1462530 MtrunA17_Chr8g0370981 27.407 405 224 9 10 351 21 418 2.13e-43 155
Msa1462530 MtrunA17_Chr2g0284921 30.323 310 192 6 34 328 35 335 3.78e-43 153
Msa1462530 MtrunA17_Chr2g0284991 28.947 342 213 8 27 349 27 357 4.82e-43 153
Msa1462530 MtrunA17_Chr5g0437421 31.902 326 190 7 30 330 29 347 5.81e-43 152
Msa1462530 MtrunA17_Chr8g0370961 30.638 235 155 3 117 349 14 242 1.83e-41 145
Msa1462530 MtrunA17_Chr5g0420811 31.343 335 197 13 12 328 11 330 6.78e-41 147
Msa1462530 MtrunA17_Chr8g0344941 27.507 349 231 8 5 335 13 357 2.71e-39 143
Msa1462530 MtrunA17_Chr3g0085231 27.083 336 209 10 33 350 31 348 1.46e-38 140
Msa1462530 MtrunA17_Chr2g0284941 28.739 341 196 9 27 350 27 337 9.33e-37 135
Msa1462530 MtrunA17_Chr1g0189921 66.667 96 19 1 32 114 30 125 3.64e-35 125
Msa1462530 MtrunA17_Chr8g0349301 30.605 281 172 7 33 300 37 307 4.21e-35 130
Msa1462530 MtrunA17_Chr8g0349331 27.809 356 194 10 16 351 20 332 4.61e-33 125
Msa1462530 MtrunA17_Chr4g0027571 28.507 221 154 3 123 341 3 221 3.01e-29 112
Msa1462530 MtrunA17_Chr6g0459921 26.937 271 186 8 87 352 98 361 4.82e-28 112
Msa1462530 MtrunA17_Chr2g0283481 29.793 386 225 15 1 349 12 388 1.77e-27 111
Msa1462530 MtrunA17_Chr6g0455661 26.160 237 171 4 118 352 238 472 1.96e-27 112
Msa1462530 MtrunA17_Chr6g0455661 43.137 102 38 4 33 121 31 125 1.89e-12 68.2
Msa1462530 MtrunA17_Chr1g0160031 29.810 369 206 16 9 336 12 368 7.53e-27 109
Msa1462530 MtrunA17_Chr7g0229591 35.057 174 98 3 10 169 7 179 7.99e-25 100
Msa1462530 MtrunA17_Chr8g0381581 25.737 373 224 15 6 336 13 374 2.44e-24 102
Msa1462530 MtrunA17_Chr6g0450721 25.000 356 226 11 8 337 7 347 1.50e-23 100
Msa1462530 MtrunA17_Chr1g0160101 26.133 375 218 14 6 337 17 375 3.59e-23 99.4
Msa1462530 MtrunA17_Chr7g0271551 27.139 339 197 12 35 343 38 356 5.72e-23 98.6
Msa1462530 MtrunA17_Chr6g0450731 26.870 361 223 13 4 337 3 349 1.26e-22 97.4
Msa1462530 MtrunA17_Chr1g0160011 28.108 370 214 16 9 337 12 370 1.99e-22 97.4
Msa1462530 MtrunA17_Chr7g0275291 24.138 377 232 12 1 337 1 363 2.02e-22 97.1
Msa1462530 MtrunA17_Chr1g0191461 25.867 375 224 15 1 335 1 361 1.24e-21 94.7
Msa1462530 MtrunA17_Chr6g0450701 26.703 367 221 15 7 337 12 366 1.61e-20 91.7
Msa1462530 MtrunA17_Chr2g0283511 28.909 339 188 16 38 336 36 361 1.63e-20 91.7
Msa1462530 MtrunA17_Chr7g0273101 25.926 351 207 13 33 343 29 366 3.63e-20 90.5
Msa1462530 MtrunA17_Chr8g0347751 26.149 348 203 15 32 337 35 370 4.85e-20 90.5
Msa1462530 MtrunA17_Chr7g0254461 24.665 373 223 15 10 337 20 379 5.81e-20 90.1
Msa1462530 MtrunA17_Chr6g0450711 26.471 340 203 13 33 337 122 449 1.69e-19 89.4
Msa1462530 MtrunA17_Chr8g0352901 27.297 370 217 15 6 337 5 360 5.19e-19 87.4
Msa1462530 MtrunA17_Chr7g0229581 29.932 147 101 2 197 341 8 154 7.92e-19 82.4
Msa1462530 MtrunA17_Chr1g0159971 25.568 352 206 12 28 337 42 379 9.07e-19 86.7
Msa1462530 MtrunA17_Chr5g0440501 23.214 224 164 3 119 335 10 232 1.30e-18 84.3
Msa1462530 MtrunA17_Chr1g0159991 25.926 378 229 15 1 337 1 368 1.59e-18 85.9
Msa1462530 MtrunA17_Chr7g0266061 26.730 318 179 14 34 323 43 334 6.70e-17 80.9
Msa1462530 MtrunA17_Chr1g0198381 23.768 345 199 14 34 346 3 315 7.93e-17 80.1
Msa1462530 MtrunA17_Chr6g0469511 39.024 123 60 3 24 132 21 142 1.94e-16 75.5
Msa1462530 MtrunA17_Chr1g0178941 24.332 337 194 13 32 333 39 349 6.75e-16 78.2
Msa1462530 MtrunA17_Chr4g0057991 22.997 387 234 15 1 343 1 367 2.34e-15 76.6
Msa1462530 MtrunA17_Chr4g0027561 38.017 121 61 2 10 116 7 127 5.64e-15 71.6
Msa1462530 MtrunA17_Chr2g0301581 24.793 363 214 14 8 336 9 346 3.91e-14 72.8
Msa1462530 MtrunA17_Chr3g0112821 23.615 343 220 14 32 343 29 360 2.26e-13 70.5
Msa1462530 MtrunA17_Chr1g0159981 24.825 286 180 11 81 337 99 378 3.23e-13 70.1
Msa1462530 MtrunA17_Chr4g0018571 30.822 146 93 3 194 334 28 170 1.28e-12 65.9
Msa1462530 MtrunA17_Chr2g0301541 24.242 363 216 14 8 336 9 346 1.63e-12 67.8
Msa1462530 MtrunA17_Chr7g0226941 23.563 348 209 13 33 337 33 366 1.75e-12 67.8
Msa1462530 MtrunA17_Chr2g0321991 37.931 116 53 4 6 105 7 119 7.33e-12 62.0
Msa1462530 MtrunA17_Chr3g0104831 24.194 248 159 10 105 336 58 292 2.48e-11 63.9
Msa1462530 MtrunA17_Chr8g0370971 37.600 125 57 6 8 113 14 136 3.85e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1462530 AT5G33370.1 66.571 347 101 2 23 356 22 366 9.00e-174 488
Msa1462530 AT3G04290.1 63.483 356 115 2 13 355 11 364 2.87e-171 481
Msa1462530 AT5G18430.1 63.636 363 113 4 5 352 4 362 1.41e-168 474
Msa1462530 AT4G28780.1 61.157 363 123 4 6 354 7 365 4.17e-161 456
Msa1462530 AT5G33370.2 63.838 271 83 2 23 280 22 290 1.30e-122 357
Msa1462530 AT2G23540.1 37.067 375 209 9 1 349 11 384 7.67e-78 244
Msa1462530 AT3G50400.1 37.500 368 208 9 1 346 1 368 8.29e-74 233
Msa1462530 AT5G15720.1 36.716 335 197 5 33 352 30 364 1.14e-67 217
Msa1462530 AT1G71691.2 37.101 345 193 7 22 353 51 384 1.47e-66 215
Msa1462530 AT1G33811.1 34.959 369 214 9 8 352 4 370 5.88e-64 208
Msa1462530 AT1G29660.1 35.393 356 214 7 12 352 10 364 1.93e-63 206
Msa1462530 AT2G42990.1 34.328 335 201 6 16 334 11 342 1.85e-62 203
Msa1462530 AT2G04570.1 32.659 346 207 7 8 337 10 345 3.88e-61 200
Msa1462530 AT5G37690.2 33.934 333 209 6 10 334 2 331 3.96e-61 200
Msa1462530 AT5G37690.1 33.138 341 209 6 10 334 2 339 7.35e-60 197
Msa1462530 AT1G75880.1 33.239 355 207 9 8 341 26 371 6.26e-59 195
Msa1462530 AT1G75890.2 35.110 319 183 8 33 332 47 360 1.10e-58 194
Msa1462530 AT1G29670.1 32.692 364 225 7 6 352 3 363 1.28e-58 194
Msa1462530 AT5G08460.1 34.561 353 212 6 16 349 30 382 1.76e-58 194
Msa1462530 AT1G75890.3 35.110 319 183 8 33 332 76 389 2.62e-58 194
Msa1462530 AT5G03820.1 34.104 346 207 6 7 334 7 349 3.96e-58 192
Msa1462530 AT1G71250.1 31.653 357 229 3 7 349 15 370 4.07e-58 193
Msa1462530 AT1G29670.2 32.692 364 225 7 6 352 71 431 7.49e-58 194
Msa1462530 AT5G03810.1 34.203 345 207 6 7 334 4 345 8.20e-58 191
Msa1462530 AT4G26790.1 32.722 327 201 6 24 334 20 343 1.27e-57 191
Msa1462530 AT4G26790.2 32.722 327 201 6 24 334 20 343 1.27e-57 191
Msa1462530 AT1G75880.2 33.239 355 206 10 8 341 26 370 1.37e-57 191
Msa1462530 AT5G03820.2 34.104 346 207 6 7 334 35 377 1.46e-57 192
Msa1462530 AT5G45670.1 33.036 336 210 6 8 329 4 338 2.01e-57 191
Msa1462530 AT5G22810.1 33.898 354 211 9 1 334 1 351 2.73e-57 190
Msa1462530 AT5G42170.1 33.754 317 188 6 34 334 51 361 4.10e-57 190
Msa1462530 AT5G41890.1 34.302 344 187 9 35 346 33 369 3.80e-56 187
Msa1462530 AT1G75890.1 33.837 331 184 9 33 332 47 373 4.53e-56 187
Msa1462530 AT3G53100.1 35.152 330 188 8 21 334 24 343 2.92e-55 185
Msa1462530 AT4G18970.1 34.839 310 187 6 34 329 29 337 4.15e-55 184
Msa1462530 AT4G18970.2 34.839 310 187 6 34 329 29 337 2.21e-54 184
Msa1462530 AT3G16370.1 33.856 319 191 7 33 334 30 345 4.94e-54 181
Msa1462530 AT4G10950.1 33.131 329 208 4 33 350 71 398 5.72e-54 182
Msa1462530 AT4G10950.2 32.733 333 208 4 33 350 71 402 1.11e-53 182
Msa1462530 AT1G71691.1 35.821 268 169 3 87 353 18 283 1.74e-53 178
Msa1462530 AT5G45960.1 33.540 322 189 7 25 325 39 356 6.64e-53 179
Msa1462530 AT1G75900.1 32.817 323 189 8 33 335 43 357 1.03e-52 178
Msa1462530 AT5G15720.3 33.333 288 188 3 69 352 46 333 1.60e-52 177
Msa1462530 AT1G58430.1 31.804 327 198 8 19 323 17 340 1.82e-52 177
Msa1462530 AT5G45950.1 32.407 324 197 8 33 341 40 356 2.09e-52 177
Msa1462530 AT2G31540.1 32.698 315 191 7 33 329 35 346 5.61e-52 176
Msa1462530 AT2G30310.1 32.698 315 191 8 33 329 34 345 9.11e-52 176
Msa1462530 AT1G06990.1 31.988 322 195 7 33 333 37 355 1.23e-51 176
Msa1462530 AT1G74460.1 33.651 315 192 5 35 334 25 337 1.94e-51 175
Msa1462530 AT2G30220.1 30.000 360 231 7 1 342 1 357 2.10e-51 175
Msa1462530 AT5G55050.1 30.882 340 209 7 34 351 40 375 1.86e-50 173
Msa1462530 AT2G24560.1 31.511 311 188 7 33 323 34 339 7.80e-50 171
Msa1462530 AT3G14820.1 31.915 329 193 9 33 341 32 349 2.21e-49 169
Msa1462530 AT5G40990.1 31.977 344 209 8 31 353 35 374 3.75e-49 169
Msa1462530 AT1G20120.1 29.154 319 207 6 33 335 78 393 2.78e-48 168
Msa1462530 AT2G19010.1 29.661 354 207 9 1 336 5 334 1.66e-47 164
Msa1462530 AT2G19010.2 29.661 354 207 9 1 336 35 364 3.55e-47 164
Msa1462530 AT2G19060.1 29.446 343 207 9 15 336 8 336 5.83e-47 163
Msa1462530 AT1G53990.1 30.110 362 229 9 10 352 8 364 1.62e-46 162
Msa1462530 AT3G14225.1 30.460 348 217 9 28 352 32 377 3.86e-46 161
Msa1462530 AT2G40250.1 30.000 320 199 5 33 331 36 351 4.31e-46 161
Msa1462530 AT3G14225.2 30.548 347 214 9 28 352 32 373 6.16e-46 161
Msa1462530 AT1G53940.2 30.000 380 235 9 1 353 1 376 8.12e-46 160
Msa1462530 AT1G20130.2 30.124 322 195 7 33 329 184 500 2.40e-45 162
Msa1462530 AT1G59406.1 29.630 351 208 10 10 335 6 342 2.54e-45 159
Msa1462530 AT1G59030.1 29.630 351 208 10 10 335 6 342 2.54e-45 159
Msa1462530 AT1G58725.1 29.630 351 208 10 10 335 6 342 2.54e-45 159
Msa1462530 AT5G15720.2 35.955 267 156 5 33 284 30 296 3.12e-45 157
Msa1462530 AT1G20130.1 30.124 322 195 7 33 329 204 520 4.17e-45 162
Msa1462530 AT1G20135.1 30.861 337 204 8 9 330 5 327 3.39e-44 155
Msa1462530 AT2G19050.1 28.750 320 203 6 30 336 28 335 4.99e-44 155
Msa1462530 AT1G71691.3 36.765 272 148 7 22 280 51 311 6.52e-44 154
Msa1462530 AT5G63170.1 31.138 334 192 9 8 325 10 321 1.52e-43 154
Msa1462530 AT1G73610.1 31.173 324 191 8 27 334 29 336 5.20e-43 152
Msa1462530 AT4G30140.1 29.909 331 203 8 34 351 34 348 2.23e-42 151
Msa1462530 AT3G43570.1 28.947 342 193 9 10 335 6 313 5.18e-42 149
Msa1462530 AT1G58520.3 30.341 323 186 9 33 334 30 334 6.63e-42 149
Msa1462530 AT1G58525.1 30.341 323 186 9 33 334 30 334 6.63e-42 149
Msa1462530 AT4G16230.1 40.265 226 120 6 7 219 6 229 1.47e-41 146
Msa1462530 AT1G20132.1 28.313 332 210 8 33 345 61 383 5.85e-40 145
Msa1462530 AT1G71120.1 31.105 344 205 11 23 346 21 352 2.02e-39 143
Msa1462530 AT1G53920.1 28.371 356 224 10 5 336 16 364 2.14e-39 144
Msa1462530 AT2G24560.2 30.597 268 161 7 33 280 34 296 8.14e-38 138
Msa1462530 AT2G31550.1 32.524 206 134 3 127 329 2 205 1.03e-35 130
Msa1462530 AT2G03980.2 28.443 334 199 10 17 328 34 349 1.22e-35 133
Msa1462530 AT2G03980.3 28.443 334 199 10 17 328 34 349 1.22e-35 133
Msa1462530 AT2G03980.1 28.443 334 199 10 17 328 34 349 1.22e-35 133
Msa1462530 AT2G03980.4 28.443 334 199 10 17 328 34 349 1.22e-35 133
Msa1462530 AT1G23500.1 29.769 346 208 9 10 336 10 339 7.47e-35 130
Msa1462530 AT1G75910.1 30.650 323 188 9 33 334 28 335 1.78e-34 130
Msa1462530 AT2G19050.2 29.508 244 151 4 30 260 28 263 2.41e-33 125
Msa1462530 AT1G75930.1 30.058 346 204 12 11 334 6 335 2.59e-33 127
Msa1462530 AT1G75920.2 28.440 327 191 10 33 335 29 336 3.64e-33 126
Msa1462530 AT3G43550.1 30.479 292 171 8 10 280 6 286 5.40e-33 124
Msa1462530 AT1G75920.1 27.193 342 191 10 33 335 24 346 5.22e-31 120
Msa1462530 AT1G75920.3 27.832 309 185 8 33 335 29 305 3.90e-30 117
Msa1462530 AT1G56670.1 27.540 374 214 14 5 343 12 363 2.71e-26 108
Msa1462530 AT1G54030.1 26.866 335 209 11 32 352 51 363 1.40e-25 107
Msa1462530 AT1G53940.1 27.243 301 194 8 1 280 1 297 1.06e-24 102
Msa1462530 AT4G01130.1 25.806 372 221 14 11 340 13 371 4.77e-24 102
Msa1462530 AT4G16233.1 36.508 126 79 1 228 352 5 130 6.10e-24 95.9
Msa1462530 AT1G09390.1 27.198 364 216 13 4 335 8 354 1.33e-23 100
Msa1462530 AT1G75920.4 26.000 300 179 10 60 335 28 308 3.29e-22 95.9
Msa1462530 AT2G04020.1 30.453 243 132 7 17 237 34 261 4.86e-22 94.4
Msa1462530 AT3G09930.2 26.667 330 188 13 30 329 36 341 5.07e-21 93.2
Msa1462530 AT3G09930.1 26.667 330 188 13 30 329 36 341 5.07e-21 93.2
Msa1462530 AT2G04020.2 30.769 221 122 6 17 221 34 239 5.53e-21 92.4
Msa1462530 AT1G54790.3 25.210 357 208 15 30 343 29 369 1.95e-20 92.0
Msa1462530 AT3G62280.1 27.208 283 175 9 81 345 90 359 9.42e-20 89.7
Msa1462530 AT4G01130.3 25.430 291 180 9 81 340 1 285 1.47e-19 88.2
Msa1462530 AT3G27950.1 25.683 366 219 11 12 337 6 358 3.49e-19 88.2
Msa1462530 AT5G03610.1 26.769 325 193 12 30 329 40 344 4.52e-19 87.8
Msa1462530 AT1G28600.1 27.405 343 198 16 32 336 30 359 2.08e-18 86.3
Msa1462530 AT1G54790.1 24.407 295 180 11 81 343 85 368 2.43e-18 85.9
Msa1462530 AT1G28610.2 26.488 336 200 15 37 336 35 359 3.29e-18 85.5
Msa1462530 AT3G14220.1 23.729 354 206 14 35 355 34 356 2.40e-17 82.8
Msa1462530 AT1G28660.1 29.111 371 203 19 12 336 8 364 3.06e-17 82.4
Msa1462530 AT3G26430.1 26.136 352 197 15 33 337 31 366 5.58e-17 81.6
Msa1462530 AT1G28580.1 28.070 342 198 17 32 336 36 366 9.60e-17 81.3
Msa1462530 AT1G54000.1 23.626 364 246 13 1 346 2 351 9.66e-17 81.3
Msa1462530 AT1G28660.2 29.380 371 201 19 12 336 8 363 1.20e-16 80.9
Msa1462530 AT3G14210.1 25.000 340 215 12 33 350 36 357 1.29e-16 80.9
Msa1462530 AT1G31550.2 27.887 355 202 20 37 352 40 379 1.93e-16 80.5
Msa1462530 AT3G05180.1 24.490 343 210 12 33 336 36 368 2.01e-16 80.1
Msa1462530 AT1G28650.1 25.888 394 239 19 4 355 2 384 2.73e-16 79.7
Msa1462530 AT2G27360.1 26.536 358 213 17 32 351 32 377 4.07e-16 79.3
Msa1462530 AT1G28640.1 26.359 368 219 15 12 337 8 365 7.25e-16 78.6
Msa1462530 AT5G14450.1 25.333 375 223 15 5 336 13 373 1.23e-15 77.8
Msa1462530 AT1G54030.2 27.966 236 140 9 32 255 51 268 1.59e-15 76.6
Msa1462530 AT1G54020.2 22.561 328 227 10 35 350 35 347 3.86e-15 76.3
Msa1462530 AT1G54790.2 24.845 322 171 15 81 343 85 394 7.34e-15 75.9
Msa1462530 AT1G54010.1 22.372 371 250 12 1 350 2 355 7.83e-15 75.5
Msa1462530 AT1G28580.2 28.315 279 169 13 81 336 15 285 8.73e-14 71.6
Msa1462530 AT1G56670.2 25.817 306 177 11 5 280 12 297 4.49e-13 69.3
Msa1462530 AT4G01130.2 23.746 299 186 12 11 280 13 298 5.70e-13 69.3
Msa1462530 AT4G16220.1 43.333 120 55 4 4 111 2 120 7.02e-13 68.2
Msa1462530 AT1G54020.1 21.852 270 193 6 84 350 7 261 8.66e-13 68.6
Msa1462530 AT1G54020.5 21.852 270 193 6 84 350 7 261 8.66e-13 68.6
Msa1462530 AT1G54020.3 21.852 270 193 6 84 350 7 261 8.66e-13 68.6
Msa1462530 AT3G14210.2 25.000 212 147 4 147 350 22 229 1.36e-12 67.8
Msa1462530 AT5G03980.1 23.864 352 199 15 11 335 7 316 2.84e-12 67.4
Msa1462530 AT1G54020.4 21.845 206 156 2 147 350 10 212 1.60e-11 63.9

Find 72 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGAGACTTGTATGTATTT+TGG 0.108906 tig0042344:+2741 Msa1462530:CDS
CTTCTAATTGGTGCCAATTT+TGG 0.116739 tig0042344:+1454 Msa1462530:CDS
TTTAATTCTGGGCTCAAATA+TGG 0.226123 tig0042344:-1421 Msa1462530:intergenic
CCTTAGCACCATTCTTTCTT+TGG 0.229575 tig0042344:+2850 Msa1462530:CDS
AATTCCAGCTGAACCAAAAT+TGG 0.235478 tig0042344:-1467 Msa1462530:intergenic
CTTCTCCTAGCTTCACCTTT+AGG 0.242700 tig0042344:-671 Msa1462530:intergenic
AAAGGGCATAAACTTCTAAT+TGG 0.258824 tig0042344:+1442 Msa1462530:CDS
GCACACTCCAATGCCATTAT+AGG 0.267744 tig0042344:-2693 Msa1462530:intergenic
GTTACTAATCCAACAGCTTA+TGG 0.274837 tig0042344:+2518 Msa1462530:CDS
CGTCGATTAACGAATTTAAT+AGG 0.279662 tig0042344:+1913 Msa1462530:CDS
ATTGATCTCCTGTATCATTA+AGG 0.282449 tig0042344:-1495 Msa1462530:intergenic
TATTTGAGCCCAGAATTAAA+AGG 0.284970 tig0042344:+1424 Msa1462530:CDS
GGTAGTTCTTAGTTTAGTTT+TGG 0.286131 tig0042344:+631 Msa1462530:CDS
GGAGATTCACTTGTCGATAA+TGG 0.287159 tig0042344:+710 Msa1462530:CDS
ATTGCAGAGGCTATATGATT+TGG 0.290553 tig0042344:+2280 Msa1462530:intron
ACCTTGTGCCTTCTTCTTCA+AGG 0.300747 tig0042344:+2016 Msa1462530:CDS
CGTGCTGATTCTCCTCCTTA+TGG 0.304741 tig0042344:+761 Msa1462530:CDS
TAGCACATGAATTAGATTAA+TGG 0.307911 tig0042344:+2877 Msa1462530:exon
AATACATACAAGTCTCTGTT+AGG 0.315997 tig0042344:-2737 Msa1462530:intergenic
CTCGCTACGCGTAGCAGAAA+TGG 0.334058 tig0042344:+2359 Msa1462530:CDS
GGCCTTATCAATCATTATCT+TGG 0.359814 tig0042344:+2898 Msa1462530:three_prime_UTR
TTGCAGAGGCTATATGATTT+GGG 0.365901 tig0042344:+2281 Msa1462530:intron
TGAGTACAGAAAGCACTTAC+AGG 0.372149 tig0042344:+2083 Msa1462530:CDS
CACACTCCAATGCCATTATA+GGG 0.395638 tig0042344:-2692 Msa1462530:intergenic
CATAGTGTGGTAATGGATAT+TGG 0.404270 tig0042344:-2044 Msa1462530:intergenic
GTAACATTTGTTCAAGTTGA+GGG 0.421129 tig0042344:-2424 Msa1462530:intergenic
TGTGGGCAAGGACCCTATAA+TGG 0.430542 tig0042344:+2680 Msa1462530:CDS
CAAAGACTCAATAGGAAACT+TGG 0.439624 tig0042344:+2446 Msa1462530:CDS
AAATGTTACAAAGACTCAAT+AGG 0.446396 tig0042344:+2438 Msa1462530:CDS
AGAATGGTGCTAAGGTTCAT+TGG 0.449069 tig0042344:-2842 Msa1462530:intergenic
ATTGGAATCCTTAATGATAC+AGG 0.451862 tig0042344:+1487 Msa1462530:CDS
CGAGTTCTAGTCACCGGAAC+AGG 0.461747 tig0042344:+2311 Msa1462530:CDS
TATCCAACTCGTAGACCAAC+TGG 0.472262 tig0042344:+791 Msa1462530:CDS
AACTTGACATAGTGTGGTAA+TGG 0.474573 tig0042344:-2051 Msa1462530:intergenic
ATTGTGGAGCAAATTATGTC+AGG 0.480353 tig0042344:+2800 Msa1462530:CDS
GTATTATTACCATAAGCTGT+TGG 0.485101 tig0042344:-2527 Msa1462530:intergenic
GCATTGTTTCTCATGACAGT+TGG 0.486126 tig0042344:+1967 Msa1462530:CDS
TGTAACATTTGTTCAAGTTG+AGG 0.490197 tig0042344:-2425 Msa1462530:intergenic
ATTTGAGCCCAGAATTAAAA+GGG 0.490626 tig0042344:+1425 Msa1462530:CDS
CATCAAAAGTAGCTTGTTGT+GGG 0.492729 tig0042344:+2663 Msa1462530:CDS
TCCATTCCATCCATCTGAAA+AGG 0.494067 tig0042344:+2766 Msa1462530:CDS
CAAGGACCCTATAATGGCAT+TGG 0.501551 tig0042344:+2686 Msa1462530:CDS
GACCAAGATAATGATTGATA+AGG 0.501925 tig0042344:-2900 Msa1462530:intergenic
GTCACCGGAACAGGACCATT+GGG 0.502106 tig0042344:+2320 Msa1462530:CDS
TTGTTTCTCATGACAGTTGG+AGG 0.512603 tig0042344:+1970 Msa1462530:CDS
ACAACCCAATGGTCCTGTTC+CGG 0.513728 tig0042344:-2324 Msa1462530:intergenic
AAAGGCAAATAGACTTATTG+TGG 0.517199 tig0042344:+2784 Msa1462530:CDS
TTAGGTGGTATTGTTCCTAA+AGG 0.517406 tig0042344:+656 Msa1462530:CDS
AGTCACCGGAACAGGACCAT+TGG 0.528716 tig0042344:+2319 Msa1462530:CDS
GTTGGATAATCAATTCCATA+AGG 0.533484 tig0042344:-776 Msa1462530:intergenic
GGCTATATGATTTGGGCGCT+CGG 0.535408 tig0042344:+2288 Msa1462530:CDS
ACATCAAAAGTAGCTTGTTG+TGG 0.536147 tig0042344:+2662 Msa1462530:CDS
AAAGTAGCTTGTTGTGGGCA+AGG 0.536850 tig0042344:+2668 Msa1462530:CDS
ATATGAACAAAACTTGAAGA+TGG 0.546795 tig0042344:-605 Msa1462530:intergenic
GCTAGCATCCAAAGAAAGAA+TGG 0.551790 tig0042344:-2858 Msa1462530:intergenic
TGGCGAGACCTTGAAGAAGA+AGG 0.553311 tig0042344:-2024 Msa1462530:intergenic
ATACATACAAGTCTCTGTTA+GGG 0.558009 tig0042344:-2736 Msa1462530:intergenic
CGAATTTAATAGGCGGTCGG+CGG 0.574495 tig0042344:+1923 Msa1462530:CDS
GTCTCTGTTAGGGCACAAGT+TGG 0.575295 tig0042344:-2726 Msa1462530:intergenic
TTGTTCCTAAAGGTGAAGCT+AGG 0.576250 tig0042344:+666 Msa1462530:CDS
CCAAAGAAAGAATGGTGCTA+AGG 0.578834 tig0042344:-2850 Msa1462530:intergenic
GCTCGGCGAGTTCTAGTCAC+CGG 0.579911 tig0042344:+2305 Msa1462530:CDS
GCTTTCTGTACTCACAAATG+AGG 0.596857 tig0042344:-2074 Msa1462530:intergenic
TAGCAGAAATGGTGAATGCT+CGG 0.598293 tig0042344:+2370 Msa1462530:CDS
ATGAGGAACTTGACATAGTG+TGG 0.606912 tig0042344:-2057 Msa1462530:intergenic
TAACGAATTTAATAGGCGGT+CGG 0.607927 tig0042344:+1920 Msa1462530:CDS
TCTGCAGGAGCACAACCCAA+TGG 0.645854 tig0042344:-2335 Msa1462530:intergenic
GGATAATCAATTCCATAAGG+AGG 0.650337 tig0042344:-773 Msa1462530:intergenic
ACCTTGAAGAAGAAGGCACA+AGG 0.663893 tig0042344:-2017 Msa1462530:intergenic
CAGAAATGGTGAATGCTCGG+TGG 0.684198 tig0042344:+2373 Msa1462530:CDS
CGATTAACGAATTTAATAGG+CGG 0.711144 tig0042344:+1916 Msa1462530:CDS
TGCTCGGTGGAACTACAACG+TGG 0.852799 tig0042344:+2386 Msa1462530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTAATATTTTAAAAT+GGG - tig0042344:981-1000 Msa1462530:intergenic 0.0%
!!! AATTTTTTAATATTTTAAAA+TGG - tig0042344:982-1001 Msa1462530:intergenic 0.0%
!!! ATTTTTTAATATTTTAAAAT+GGG - tig0042344:981-1000 Msa1462530:intergenic 0.0%
!!! AATTTTTTAATATTTTAAAA+TGG - tig0042344:982-1001 Msa1462530:intergenic 0.0%
!!! TTAACCTTTTTTTTTTTTTT+TGG + tig0042344:874-893 Msa1462530:intron 10.0%
!!! ACTATATTGTTTTAAAATTT+TGG + tig0042344:1260-1279 Msa1462530:intron 10.0%
!!! TTAACCTTTTTTTTTTTTTT+TGG + tig0042344:874-893 Msa1462530:intron 10.0%
!!! ACTATATTGTTTTAAAATTT+TGG + tig0042344:1260-1279 Msa1462530:intron 10.0%
!! TAAGCCAAAAAAAAAAAAAA+AGG - tig0042344:881-900 Msa1462530:intergenic 15.0%
!! GGAAAATAAAATGATAAAAT+TGG + tig0042344:1174-1193 Msa1462530:intron 15.0%
!!! TTGTTTTAAAATTTTGGAAT+AGG + tig0042344:1266-1285 Msa1462530:intron 15.0%
!! TAAGCCAAAAAAAAAAAAAA+AGG - tig0042344:881-900 Msa1462530:intergenic 15.0%
!! GGAAAATAAAATGATAAAAT+TGG + tig0042344:1174-1193 Msa1462530:intron 15.0%
!!! TTGTTTTAAAATTTTGGAAT+AGG + tig0042344:1266-1285 Msa1462530:intron 15.0%
!!! TTCAAGTTTTGTTCATATTA+TGG + tig0042344:610-629 Msa1462530:CDS 20.0%
!! AAAAGGTTAATAAATATGCA+TGG - tig0042344:864-883 Msa1462530:intergenic 20.0%
!! ATTCATGAATCTGTAAAAAT+GGG - tig0042344:921-940 Msa1462530:intergenic 20.0%
!! AATTCATGAATCTGTAAAAA+TGG - tig0042344:922-941 Msa1462530:intergenic 20.0%
!!! TTTTTTGTCAAGAAATAACA+TGG + tig0042344:1153-1172 Msa1462530:intron 20.0%
!! TAATACATGCTATAAGTATT+TGG + tig0042344:1588-1607 Msa1462530:intron 20.0%
!!! TTCATGACATTTTTTTGAAA+AGG - tig0042344:2201-2220 Msa1462530:intergenic 20.0%
!!! TTCAAGTTTTGTTCATATTA+TGG + tig0042344:610-629 Msa1462530:CDS 20.0%
!! AAAAGGTTAATAAATATGCA+TGG - tig0042344:864-883 Msa1462530:intergenic 20.0%
!! ATTCATGAATCTGTAAAAAT+GGG - tig0042344:921-940 Msa1462530:intergenic 20.0%
!! AATTCATGAATCTGTAAAAA+TGG - tig0042344:922-941 Msa1462530:intergenic 20.0%
!!! TTTTTTGTCAAGAAATAACA+TGG + tig0042344:1153-1172 Msa1462530:intron 20.0%
!! TAATACATGCTATAAGTATT+TGG + tig0042344:1588-1607 Msa1462530:intron 20.0%
!!! TTCATGACATTTTTTTGAAA+AGG - tig0042344:2201-2220 Msa1462530:intergenic 20.0%
! ATATGAACAAAACTTGAAGA+TGG - tig0042344:608-627 None:intergenic 25.0%
!!! AGAAGAGCTTTTTTTGTATT+TGG + tig0042344:689-708 Msa1462530:CDS 25.0%
! TTGTTGGATTTAAAAGTTGA+AGG - tig0042344:949-968 Msa1462530:intergenic 25.0%
! AAAATAGACCTCAAATTTAC+TGG + tig0042344:1203-1222 Msa1462530:intron 25.0%
!! ATAACAAACTATCCTTTTTC+AGG + tig0042344:1370-1389 Msa1462530:intron 25.0%
! AATTTGTGTCACATGTAATT+TGG - tig0042344:1762-1781 Msa1462530:intergenic 25.0%
! AAACAAAAGTTGCATTATCA+AGG - tig0042344:1838-1857 Msa1462530:intergenic 25.0%
! ATTAAGAAGAACAAACACAT+AGG - tig0042344:2243-2262 Msa1462530:intergenic 25.0%
! AAATGTTACAAAGACTCAAT+AGG + tig0042344:2438-2457 Msa1462530:CDS 25.0%
! TAGTTGTTGAAAATGAAAGT+TGG - tig0042344:2572-2591 Msa1462530:intergenic 25.0%
! TGTTGTTGAATTAATTGTGT+AGG + tig0042344:2632-2651 Msa1462530:intron 25.0%
! TAGCACATGAATTAGATTAA+TGG + tig0042344:2877-2896 Msa1462530:exon 25.0%
! ATATGAACAAAACTTGAAGA+TGG - tig0042344:608-627 Msa1462530:intergenic 25.0%
!!! AGAAGAGCTTTTTTTGTATT+TGG + tig0042344:689-708 Msa1462530:CDS 25.0%
! TTGTTGGATTTAAAAGTTGA+AGG - tig0042344:949-968 Msa1462530:intergenic 25.0%
! AAAATAGACCTCAAATTTAC+TGG + tig0042344:1203-1222 Msa1462530:intron 25.0%
!! ATAACAAACTATCCTTTTTC+AGG + tig0042344:1370-1389 Msa1462530:intron 25.0%
! AATTTGTGTCACATGTAATT+TGG - tig0042344:1762-1781 Msa1462530:intergenic 25.0%
! AAACAAAAGTTGCATTATCA+AGG - tig0042344:1838-1857 Msa1462530:intergenic 25.0%
! ATTAAGAAGAACAAACACAT+AGG - tig0042344:2243-2262 Msa1462530:intergenic 25.0%
! AAATGTTACAAAGACTCAAT+AGG + tig0042344:2438-2457 Msa1462530:CDS 25.0%
! TAGTTGTTGAAAATGAAAGT+TGG - tig0042344:2572-2591 Msa1462530:intergenic 25.0%
! TGTTGTTGAATTAATTGTGT+AGG + tig0042344:2632-2651 Msa1462530:intron 25.0%
! TAGCACATGAATTAGATTAA+TGG + tig0042344:2877-2896 Msa1462530:exon 25.0%
!! GGTAGTTCTTAGTTTAGTTT+TGG + tig0042344:631-650 Msa1462530:CDS 30.0%
!!! CTTAGTTTAGTTTTGGTGTT+AGG + tig0042344:638-657 Msa1462530:CDS 30.0%
GTTGGATAATCAATTCCATA+AGG - tig0042344:779-798 Msa1462530:intergenic 30.0%
AAATGGGAAGCAATATTTGT+TGG - tig0042344:965-984 Msa1462530:intergenic 30.0%
TTCTCTAGACATTGAATTTG+AGG + tig0042344:1001-1020 Msa1462530:intron 30.0%
!! TGTCAAGTTGAATAATGAGT+TGG + tig0042344:1044-1063 Msa1462530:intron 30.0%
GAAAGTAACCAGTAAATTTG+AGG - tig0042344:1214-1233 Msa1462530:intergenic 30.0%
TTTAATTCTGGGCTCAAATA+TGG - tig0042344:1424-1443 Msa1462530:intergenic 30.0%
TATTTGAGCCCAGAATTAAA+AGG + tig0042344:1424-1443 Msa1462530:CDS 30.0%
ATTTGAGCCCAGAATTAAAA+GGG + tig0042344:1425-1444 Msa1462530:CDS 30.0%
!! GTTTATGCCCTTTTAATTCT+GGG - tig0042344:1435-1454 Msa1462530:intergenic 30.0%
!! AGTTTATGCCCTTTTAATTC+TGG - tig0042344:1436-1455 Msa1462530:intergenic 30.0%
! AAAGGGCATAAACTTCTAAT+TGG + tig0042344:1442-1461 Msa1462530:CDS 30.0%
ATTGGAATCCTTAATGATAC+AGG + tig0042344:1487-1506 Msa1462530:CDS 30.0%
ATTGATCTCCTGTATCATTA+AGG - tig0042344:1498-1517 Msa1462530:intergenic 30.0%
TGCATTATATGAACTGGTAT+AGG - tig0042344:1560-1579 Msa1462530:intergenic 30.0%
TGAGTATGCATTATATGAAC+TGG - tig0042344:1566-1585 Msa1462530:intergenic 30.0%
TTTGTCGAATCTTTATGACA+TGG - tig0042344:1615-1634 Msa1462530:intergenic 30.0%
TGTATTATTTAATCCTGCCA+AGG - tig0042344:1699-1718 Msa1462530:intergenic 30.0%
!! CTTTTGTTTGCAGATAAATG+TGG + tig0042344:1849-1868 Msa1462530:intron 30.0%
! CGTCGATTAACGAATTTAAT+AGG + tig0042344:1913-1932 Msa1462530:CDS 30.0%
CGATTAACGAATTTAATAGG+CGG + tig0042344:1916-1935 Msa1462530:CDS 30.0%
! AGCTTTTGCTAAGTAAGAAT+TGG - tig0042344:2136-2155 Msa1462530:intergenic 30.0%
!! GTAACATTTGTTCAAGTTGA+GGG - tig0042344:2427-2446 Msa1462530:intergenic 30.0%
!! TGTAACATTTGTTCAAGTTG+AGG - tig0042344:2428-2447 Msa1462530:intergenic 30.0%
GTATTATTACCATAAGCTGT+TGG - tig0042344:2530-2549 Msa1462530:intergenic 30.0%
ATACATACAAGTCTCTGTTA+GGG - tig0042344:2739-2758 Msa1462530:intergenic 30.0%
AATACATACAAGTCTCTGTT+AGG - tig0042344:2740-2759 Msa1462530:intergenic 30.0%
! ACAGAGACTTGTATGTATTT+TGG + tig0042344:2741-2760 Msa1462530:CDS 30.0%
! CAGAGACTTGTATGTATTTT+GGG + tig0042344:2742-2761 Msa1462530:CDS 30.0%
AAAGGCAAATAGACTTATTG+TGG + tig0042344:2784-2803 Msa1462530:CDS 30.0%
GACCAAGATAATGATTGATA+AGG - tig0042344:2903-2922 Msa1462530:intergenic 30.0%
!! GGTAGTTCTTAGTTTAGTTT+TGG + tig0042344:631-650 Msa1462530:CDS 30.0%
!!! CTTAGTTTAGTTTTGGTGTT+AGG + tig0042344:638-657 Msa1462530:CDS 30.0%
GTTGGATAATCAATTCCATA+AGG - tig0042344:779-798 Msa1462530:intergenic 30.0%
AAATGGGAAGCAATATTTGT+TGG - tig0042344:965-984 Msa1462530:intergenic 30.0%
TTCTCTAGACATTGAATTTG+AGG + tig0042344:1001-1020 Msa1462530:intron 30.0%
!! TGTCAAGTTGAATAATGAGT+TGG + tig0042344:1044-1063 Msa1462530:intron 30.0%
GAAAGTAACCAGTAAATTTG+AGG - tig0042344:1214-1233 Msa1462530:intergenic 30.0%
TTTAATTCTGGGCTCAAATA+TGG - tig0042344:1424-1443 Msa1462530:intergenic 30.0%
TATTTGAGCCCAGAATTAAA+AGG + tig0042344:1424-1443 Msa1462530:CDS 30.0%
ATTTGAGCCCAGAATTAAAA+GGG + tig0042344:1425-1444 Msa1462530:CDS 30.0%
!! GTTTATGCCCTTTTAATTCT+GGG - tig0042344:1435-1454 Msa1462530:intergenic 30.0%
!! AGTTTATGCCCTTTTAATTC+TGG - tig0042344:1436-1455 Msa1462530:intergenic 30.0%
! AAAGGGCATAAACTTCTAAT+TGG + tig0042344:1442-1461 Msa1462530:CDS 30.0%
ATTGGAATCCTTAATGATAC+AGG + tig0042344:1487-1506 Msa1462530:CDS 30.0%
ATTGATCTCCTGTATCATTA+AGG - tig0042344:1498-1517 Msa1462530:intergenic 30.0%
TGCATTATATGAACTGGTAT+AGG - tig0042344:1560-1579 Msa1462530:intergenic 30.0%
TGAGTATGCATTATATGAAC+TGG - tig0042344:1566-1585 Msa1462530:intergenic 30.0%
TTTGTCGAATCTTTATGACA+TGG - tig0042344:1615-1634 Msa1462530:intergenic 30.0%
TGTATTATTTAATCCTGCCA+AGG - tig0042344:1699-1718 Msa1462530:intergenic 30.0%
!! CTTTTGTTTGCAGATAAATG+TGG + tig0042344:1849-1868 Msa1462530:intron 30.0%
! CGTCGATTAACGAATTTAAT+AGG + tig0042344:1913-1932 Msa1462530:CDS 30.0%
CGATTAACGAATTTAATAGG+CGG + tig0042344:1916-1935 Msa1462530:CDS 30.0%
! AGCTTTTGCTAAGTAAGAAT+TGG - tig0042344:2136-2155 Msa1462530:intergenic 30.0%
!! GTAACATTTGTTCAAGTTGA+GGG - tig0042344:2427-2446 Msa1462530:intergenic 30.0%
!! TGTAACATTTGTTCAAGTTG+AGG - tig0042344:2428-2447 Msa1462530:intergenic 30.0%
GTATTATTACCATAAGCTGT+TGG - tig0042344:2530-2549 Msa1462530:intergenic 30.0%
ATACATACAAGTCTCTGTTA+GGG - tig0042344:2739-2758 Msa1462530:intergenic 30.0%
AATACATACAAGTCTCTGTT+AGG - tig0042344:2740-2759 Msa1462530:intergenic 30.0%
! ACAGAGACTTGTATGTATTT+TGG + tig0042344:2741-2760 Msa1462530:CDS 30.0%
! CAGAGACTTGTATGTATTTT+GGG + tig0042344:2742-2761 Msa1462530:CDS 30.0%
AAAGGCAAATAGACTTATTG+TGG + tig0042344:2784-2803 Msa1462530:CDS 30.0%
GACCAAGATAATGATTGATA+AGG - tig0042344:2903-2922 Msa1462530:intergenic 30.0%
!!! AGTTTAGTTTTGGTGTTAGG+TGG + tig0042344:641-660 Msa1462530:CDS 35.0%
TTAGGTGGTATTGTTCCTAA+AGG + tig0042344:656-675 Msa1462530:CDS 35.0%
GGATAATCAATTCCATAAGG+AGG - tig0042344:776-795 Msa1462530:intergenic 35.0%
GAAACTTAGCTGATAAGATC+AGG - tig0042344:842-861 Msa1462530:intergenic 35.0%
! AAGTTGAATAATGAGTTGGC+CGG + tig0042344:1048-1067 Msa1462530:intron 35.0%
!!! CTTCTAATTGGTGCCAATTT+TGG + tig0042344:1454-1473 Msa1462530:CDS 35.0%
AATTCCAGCTGAACCAAAAT+TGG - tig0042344:1470-1489 Msa1462530:intergenic 35.0%
!!! AATTTTGGTTCAGCTGGAAT+TGG + tig0042344:1469-1488 Msa1462530:CDS 35.0%
! GATTCGACAAAGTTTTACGT+TGG + tig0042344:1624-1643 Msa1462530:intron 35.0%
TAAAAGGAGAGAGTTGTGTT+AGG - tig0042344:1659-1678 Msa1462530:intergenic 35.0%
GGTAAAAATGCATACACAAC+TGG + tig0042344:1870-1889 Msa1462530:CDS 35.0%
TAACGAATTTAATAGGCGGT+CGG + tig0042344:1920-1939 Msa1462530:CDS 35.0%
!! CATAGTGTGGTAATGGATAT+TGG - tig0042344:2047-2066 Msa1462530:intergenic 35.0%
AACTTGACATAGTGTGGTAA+TGG - tig0042344:2054-2073 Msa1462530:intergenic 35.0%
! TGAAAAGGTGAGTTTTACTG+TGG - tig0042344:2186-2205 Msa1462530:intergenic 35.0%
TCTTACGAAACTTATTGCAG+AGG + tig0042344:2267-2286 Msa1462530:intron 35.0%
ATTGCAGAGGCTATATGATT+TGG + tig0042344:2280-2299 Msa1462530:intron 35.0%
TTGCAGAGGCTATATGATTT+GGG + tig0042344:2281-2300 Msa1462530:intron 35.0%
CAAAGACTCAATAGGAAACT+TGG + tig0042344:2446-2465 Msa1462530:CDS 35.0%
GTTACTAATCCAACAGCTTA+TGG + tig0042344:2518-2537 Msa1462530:CDS 35.0%
!! ACATCAAAAGTAGCTTGTTG+TGG + tig0042344:2662-2681 Msa1462530:CDS 35.0%
!! CATCAAAAGTAGCTTGTTGT+GGG + tig0042344:2663-2682 Msa1462530:CDS 35.0%
! TATTTGCCTTTTCAGATGGA+TGG - tig0042344:2775-2794 Msa1462530:intergenic 35.0%
! AGTCTATTTGCCTTTTCAGA+TGG - tig0042344:2779-2798 Msa1462530:intergenic 35.0%
ATTGTGGAGCAAATTATGTC+AGG + tig0042344:2800-2819 Msa1462530:CDS 35.0%
! GGCCTTATCAATCATTATCT+TGG + tig0042344:2898-2917 Msa1462530:three_prime_UTR 35.0%
!!! AGTTTAGTTTTGGTGTTAGG+TGG + tig0042344:641-660 Msa1462530:CDS 35.0%
TTAGGTGGTATTGTTCCTAA+AGG + tig0042344:656-675 Msa1462530:CDS 35.0%
GGATAATCAATTCCATAAGG+AGG - tig0042344:776-795 Msa1462530:intergenic 35.0%
GAAACTTAGCTGATAAGATC+AGG - tig0042344:842-861 Msa1462530:intergenic 35.0%
! AAGTTGAATAATGAGTTGGC+CGG + tig0042344:1048-1067 Msa1462530:intron 35.0%
!!! CTTCTAATTGGTGCCAATTT+TGG + tig0042344:1454-1473 Msa1462530:CDS 35.0%
AATTCCAGCTGAACCAAAAT+TGG - tig0042344:1470-1489 Msa1462530:intergenic 35.0%
!!! AATTTTGGTTCAGCTGGAAT+TGG + tig0042344:1469-1488 Msa1462530:CDS 35.0%
! GATTCGACAAAGTTTTACGT+TGG + tig0042344:1624-1643 Msa1462530:intron 35.0%
TAAAAGGAGAGAGTTGTGTT+AGG - tig0042344:1659-1678 Msa1462530:intergenic 35.0%
GGTAAAAATGCATACACAAC+TGG + tig0042344:1870-1889 Msa1462530:CDS 35.0%
TAACGAATTTAATAGGCGGT+CGG + tig0042344:1920-1939 Msa1462530:CDS 35.0%
!! CATAGTGTGGTAATGGATAT+TGG - tig0042344:2047-2066 Msa1462530:intergenic 35.0%
AACTTGACATAGTGTGGTAA+TGG - tig0042344:2054-2073 Msa1462530:intergenic 35.0%
! TGAAAAGGTGAGTTTTACTG+TGG - tig0042344:2186-2205 Msa1462530:intergenic 35.0%
TCTTACGAAACTTATTGCAG+AGG + tig0042344:2267-2286 Msa1462530:intron 35.0%
ATTGCAGAGGCTATATGATT+TGG + tig0042344:2280-2299 Msa1462530:intron 35.0%
TTGCAGAGGCTATATGATTT+GGG + tig0042344:2281-2300 Msa1462530:intron 35.0%
CAAAGACTCAATAGGAAACT+TGG + tig0042344:2446-2465 Msa1462530:CDS 35.0%
GTTACTAATCCAACAGCTTA+TGG + tig0042344:2518-2537 Msa1462530:CDS 35.0%
!! ACATCAAAAGTAGCTTGTTG+TGG + tig0042344:2662-2681 Msa1462530:CDS 35.0%
!! CATCAAAAGTAGCTTGTTGT+GGG + tig0042344:2663-2682 Msa1462530:CDS 35.0%
! TATTTGCCTTTTCAGATGGA+TGG - tig0042344:2775-2794 Msa1462530:intergenic 35.0%
! AGTCTATTTGCCTTTTCAGA+TGG - tig0042344:2779-2798 Msa1462530:intergenic 35.0%
ATTGTGGAGCAAATTATGTC+AGG + tig0042344:2800-2819 Msa1462530:CDS 35.0%
! GGCCTTATCAATCATTATCT+TGG + tig0042344:2898-2917 Msa1462530:three_prime_UTR 35.0%
TTGTTCCTAAAGGTGAAGCT+AGG + tig0042344:666-685 Msa1462530:CDS 40.0%
GGAGATTCACTTGTCGATAA+TGG + tig0042344:710-729 Msa1462530:CDS 40.0%
TTGACACTTCATCTAGTGAC+CGG - tig0042344:1070-1089 Msa1462530:intergenic 40.0%
TGAACTGGTATAGGTAGCAA+AGG - tig0042344:1551-1570 Msa1462530:intergenic 40.0%
!! AAGTTTTACGTTGGTTGTCG+AGG + tig0042344:1633-1652 Msa1462530:intron 40.0%
TTATTTAATCCTGCCAAGGC+CGG - tig0042344:1695-1714 Msa1462530:intergenic 40.0%
! GCATTGTTTCTCATGACAGT+TGG + tig0042344:1967-1986 Msa1462530:CDS 40.0%
! TTGTTTCTCATGACAGTTGG+AGG + tig0042344:1970-1989 Msa1462530:CDS 40.0%
ATGAGGAACTTGACATAGTG+TGG - tig0042344:2060-2079 Msa1462530:intergenic 40.0%
GCTTTCTGTACTCACAAATG+AGG - tig0042344:2077-2096 Msa1462530:intergenic 40.0%
!! TGAGTACAGAAAGCACTTAC+AGG + tig0042344:2083-2102 Msa1462530:CDS 40.0%
!! GTGAGTTTTACTGTGGACTA+TGG - tig0042344:2179-2198 Msa1462530:intergenic 40.0%
TAGCAGAAATGGTGAATGCT+CGG + tig0042344:2370-2389 Msa1462530:CDS 40.0%
CACACTCCAATGCCATTATA+GGG - tig0042344:2695-2714 Msa1462530:intergenic 40.0%
TCCATTCCATCCATCTGAAA+AGG + tig0042344:2766-2785 Msa1462530:CDS 40.0%
! AGAATGGTGCTAAGGTTCAT+TGG - tig0042344:2845-2864 Msa1462530:intergenic 40.0%
! CCAAAGAAAGAATGGTGCTA+AGG - tig0042344:2853-2872 Msa1462530:intergenic 40.0%
CCTTAGCACCATTCTTTCTT+TGG + tig0042344:2850-2869 Msa1462530:CDS 40.0%
GCTAGCATCCAAAGAAAGAA+TGG - tig0042344:2861-2880 Msa1462530:intergenic 40.0%
TTGTTCCTAAAGGTGAAGCT+AGG + tig0042344:666-685 Msa1462530:CDS 40.0%
GGAGATTCACTTGTCGATAA+TGG + tig0042344:710-729 Msa1462530:CDS 40.0%
TTGACACTTCATCTAGTGAC+CGG - tig0042344:1070-1089 Msa1462530:intergenic 40.0%
TGAACTGGTATAGGTAGCAA+AGG - tig0042344:1551-1570 Msa1462530:intergenic 40.0%
!! AAGTTTTACGTTGGTTGTCG+AGG + tig0042344:1633-1652 Msa1462530:intron 40.0%
TTATTTAATCCTGCCAAGGC+CGG - tig0042344:1695-1714 Msa1462530:intergenic 40.0%
! GCATTGTTTCTCATGACAGT+TGG + tig0042344:1967-1986 Msa1462530:CDS 40.0%
! TTGTTTCTCATGACAGTTGG+AGG + tig0042344:1970-1989 Msa1462530:CDS 40.0%
ATGAGGAACTTGACATAGTG+TGG - tig0042344:2060-2079 Msa1462530:intergenic 40.0%
GCTTTCTGTACTCACAAATG+AGG - tig0042344:2077-2096 Msa1462530:intergenic 40.0%
!! TGAGTACAGAAAGCACTTAC+AGG + tig0042344:2083-2102 Msa1462530:CDS 40.0%
!! GTGAGTTTTACTGTGGACTA+TGG - tig0042344:2179-2198 Msa1462530:intergenic 40.0%
TAGCAGAAATGGTGAATGCT+CGG + tig0042344:2370-2389 Msa1462530:CDS 40.0%
CACACTCCAATGCCATTATA+GGG - tig0042344:2695-2714 Msa1462530:intergenic 40.0%
TCCATTCCATCCATCTGAAA+AGG + tig0042344:2766-2785 Msa1462530:CDS 40.0%
! AGAATGGTGCTAAGGTTCAT+TGG - tig0042344:2845-2864 Msa1462530:intergenic 40.0%
! CCAAAGAAAGAATGGTGCTA+AGG - tig0042344:2853-2872 Msa1462530:intergenic 40.0%
CCTTAGCACCATTCTTTCTT+TGG + tig0042344:2850-2869 Msa1462530:CDS 40.0%
GCTAGCATCCAAAGAAAGAA+TGG - tig0042344:2861-2880 Msa1462530:intergenic 40.0%
CTTCTCCTAGCTTCACCTTT+AGG - tig0042344:674-693 Msa1462530:intergenic 45.0%
TATCCAACTCGTAGACCAAC+TGG + tig0042344:791-810 Msa1462530:CDS 45.0%
CCATTTGAAAACCGACCAGT+TGG - tig0042344:809-828 Msa1462530:intergenic 45.0%
!! CCAACTGGTCGGTTTTCAAA+TGG + tig0042344:806-825 Msa1462530:intron 45.0%
CCAAGTTGCTGACCTGAAAA+AGG - tig0042344:1385-1404 Msa1462530:intergenic 45.0%
!!! CCTTTTTCAGGTCAGCAACT+TGG + tig0042344:1382-1401 Msa1462530:intron 45.0%
! CACAACTCTCTCCTTTTACC+CGG + tig0042344:1661-1680 Msa1462530:intron 45.0%
! ACAACTCTCTCCTTTTACCC+GGG + tig0042344:1662-1681 Msa1462530:intron 45.0%
ACCTTGTGCCTTCTTCTTCA+AGG + tig0042344:2016-2035 Msa1462530:CDS 45.0%
! ACCTTGAAGAAGAAGGCACA+AGG - tig0042344:2020-2039 Msa1462530:intergenic 45.0%
!! AAAGTAGCTTGTTGTGGGCA+AGG + tig0042344:2668-2687 Msa1462530:CDS 45.0%
CAAGGACCCTATAATGGCAT+TGG + tig0042344:2686-2705 Msa1462530:CDS 45.0%
GCACACTCCAATGCCATTAT+AGG - tig0042344:2696-2715 Msa1462530:intergenic 45.0%
! GCCTTTTCAGATGGATGGAA+TGG - tig0042344:2770-2789 Msa1462530:intergenic 45.0%
CTTCTCCTAGCTTCACCTTT+AGG - tig0042344:674-693 Msa1462530:intergenic 45.0%
TATCCAACTCGTAGACCAAC+TGG + tig0042344:791-810 Msa1462530:CDS 45.0%
CCATTTGAAAACCGACCAGT+TGG - tig0042344:809-828 Msa1462530:intergenic 45.0%
!! CCAACTGGTCGGTTTTCAAA+TGG + tig0042344:806-825 Msa1462530:intron 45.0%
CCAAGTTGCTGACCTGAAAA+AGG - tig0042344:1385-1404 Msa1462530:intergenic 45.0%
!!! CCTTTTTCAGGTCAGCAACT+TGG + tig0042344:1382-1401 Msa1462530:intron 45.0%
! CACAACTCTCTCCTTTTACC+CGG + tig0042344:1661-1680 Msa1462530:intron 45.0%
! ACAACTCTCTCCTTTTACCC+GGG + tig0042344:1662-1681 Msa1462530:intron 45.0%
ACCTTGTGCCTTCTTCTTCA+AGG + tig0042344:2016-2035 Msa1462530:CDS 45.0%
! ACCTTGAAGAAGAAGGCACA+AGG - tig0042344:2020-2039 Msa1462530:intergenic 45.0%
!! AAAGTAGCTTGTTGTGGGCA+AGG + tig0042344:2668-2687 Msa1462530:CDS 45.0%
CAAGGACCCTATAATGGCAT+TGG + tig0042344:2686-2705 Msa1462530:CDS 45.0%
GCACACTCCAATGCCATTAT+AGG - tig0042344:2696-2715 Msa1462530:intergenic 45.0%
! GCCTTTTCAGATGGATGGAA+TGG - tig0042344:2770-2789 Msa1462530:intergenic 45.0%
!! AAAAAAAATTATAAAGTTAT+TGG + tig0042344:1736-1755 Msa1462530:intron 5.0%
!! AAAAAAAATTATAAAGTTAT+TGG + tig0042344:1736-1755 Msa1462530:intron 5.0%
!! CGTGCTGATTCTCCTCCTTA+TGG + tig0042344:761-780 Msa1462530:CDS 50.0%
CAACTCGTAGACCAACTGGT+CGG + tig0042344:795-814 Msa1462530:intron 50.0%
!!! GGTGCCAATTTTGGTTCAGC+TGG + tig0042344:1463-1482 Msa1462530:CDS 50.0%
CGAATTTAATAGGCGGTCGG+CGG + tig0042344:1923-1942 Msa1462530:CDS 50.0%
TGGCGAGACCTTGAAGAAGA+AGG - tig0042344:2027-2046 Msa1462530:intergenic 50.0%
! GGCTATATGATTTGGGCGCT+CGG + tig0042344:2288-2307 Msa1462530:CDS 50.0%
ACAACCCAATGGTCCTGTTC+CGG - tig0042344:2327-2346 Msa1462530:intergenic 50.0%
CAGAAATGGTGAATGCTCGG+TGG + tig0042344:2373-2392 Msa1462530:CDS 50.0%
TGTGGGCAAGGACCCTATAA+TGG + tig0042344:2680-2699 Msa1462530:CDS 50.0%
GTCTCTGTTAGGGCACAAGT+TGG - tig0042344:2729-2748 Msa1462530:intergenic 50.0%
!! CGTGCTGATTCTCCTCCTTA+TGG + tig0042344:761-780 Msa1462530:CDS 50.0%
CAACTCGTAGACCAACTGGT+CGG + tig0042344:795-814 Msa1462530:intron 50.0%
!!! GGTGCCAATTTTGGTTCAGC+TGG + tig0042344:1463-1482 Msa1462530:CDS 50.0%
CGAATTTAATAGGCGGTCGG+CGG + tig0042344:1923-1942 Msa1462530:CDS 50.0%
TGGCGAGACCTTGAAGAAGA+AGG - tig0042344:2027-2046 Msa1462530:intergenic 50.0%
! GGCTATATGATTTGGGCGCT+CGG + tig0042344:2288-2307 Msa1462530:CDS 50.0%
ACAACCCAATGGTCCTGTTC+CGG - tig0042344:2327-2346 Msa1462530:intergenic 50.0%
CAGAAATGGTGAATGCTCGG+TGG + tig0042344:2373-2392 Msa1462530:CDS 50.0%
TGTGGGCAAGGACCCTATAA+TGG + tig0042344:2680-2699 Msa1462530:CDS 50.0%
GTCTCTGTTAGGGCACAAGT+TGG - tig0042344:2729-2748 Msa1462530:intergenic 50.0%
! CGACCAGTTGGTCTACGAGT+TGG - tig0042344:797-816 Msa1462530:intergenic 55.0%
! TCTCTCCTTTTACCCGGGCT+TGG + tig0042344:1667-1686 Msa1462530:intron 55.0%
! CTCTCCTTTTACCCGGGCTT+GGG + tig0042344:1668-1687 Msa1462530:intron 55.0%
! CGAGTTCTAGTCACCGGAAC+AGG + tig0042344:2311-2330 Msa1462530:CDS 55.0%
AGTCACCGGAACAGGACCAT+TGG + tig0042344:2319-2338 Msa1462530:CDS 55.0%
GTCACCGGAACAGGACCATT+GGG + tig0042344:2320-2339 Msa1462530:CDS 55.0%
! TCTGCAGGAGCACAACCCAA+TGG - tig0042344:2338-2357 Msa1462530:intergenic 55.0%
CTCGCTACGCGTAGCAGAAA+TGG + tig0042344:2359-2378 Msa1462530:CDS 55.0%
! TGCTCGGTGGAACTACAACG+TGG + tig0042344:2386-2405 Msa1462530:CDS 55.0%
! CGACCAGTTGGTCTACGAGT+TGG - tig0042344:797-816 Msa1462530:intergenic 55.0%
! TCTCTCCTTTTACCCGGGCT+TGG + tig0042344:1667-1686 Msa1462530:intron 55.0%
! CTCTCCTTTTACCCGGGCTT+GGG + tig0042344:1668-1687 Msa1462530:intron 55.0%
! CGAGTTCTAGTCACCGGAAC+AGG + tig0042344:2311-2330 Msa1462530:CDS 55.0%
AGTCACCGGAACAGGACCAT+TGG + tig0042344:2319-2338 Msa1462530:CDS 55.0%
GTCACCGGAACAGGACCATT+GGG + tig0042344:2320-2339 Msa1462530:CDS 55.0%
! TCTGCAGGAGCACAACCCAA+TGG - tig0042344:2338-2357 Msa1462530:intergenic 55.0%
CTCGCTACGCGTAGCAGAAA+TGG + tig0042344:2359-2378 Msa1462530:CDS 55.0%
! TGCTCGGTGGAACTACAACG+TGG + tig0042344:2386-2405 Msa1462530:CDS 55.0%
! CTTTTACCCGGGCTTGGGAC+CGG + tig0042344:1673-1692 Msa1462530:intron 60.0%
! GCTCGGCGAGTTCTAGTCAC+CGG + tig0042344:2305-2324 Msa1462530:CDS 60.0%
CTACGCGTAGCGAGTTCTGC+AGG - tig0042344:2353-2372 Msa1462530:intergenic 60.0%
! CTTTTACCCGGGCTTGGGAC+CGG + tig0042344:1673-1692 Msa1462530:intron 60.0%
! GCTCGGCGAGTTCTAGTCAC+CGG + tig0042344:2305-2324 Msa1462530:CDS 60.0%
CTACGCGTAGCGAGTTCTGC+AGG - tig0042344:2353-2372 Msa1462530:intergenic 60.0%
CGGTCCCAAGCCCGGGTAAA+AGG - tig0042344:1675-1694 Msa1462530:intergenic 65.0%
CGGTCCCAAGCCCGGGTAAA+AGG - tig0042344:1675-1694 Msa1462530:intergenic 65.0%
CCAAGGCCGGTCCCAAGCCC+GGG - tig0042344:1682-1701 Msa1462530:intergenic 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG - tig0042344:1683-1702 Msa1462530:intergenic 75.0%
GGCTTGGGACCGGCCTTGGC+AGG + tig0042344:1683-1702 Msa1462530:intron 75.0%
CCAAGGCCGGTCCCAAGCCC+GGG - tig0042344:1682-1701 Msa1462530:intergenic 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG - tig0042344:1683-1702 Msa1462530:intergenic 75.0%
GGCTTGGGACCGGCCTTGGC+AGG + tig0042344:1683-1702 Msa1462530:intron 75.0%
! CCCGGGCTTGGGACCGGCCT+TGG + tig0042344:1679-1698 Msa1462530:intron 80.0%
! CCCGGGCTTGGGACCGGCCT+TGG + tig0042344:1679-1698 Msa1462530:intron 80.0%
Chromosome Type Strat End Strand Name
tig0042344 gene 599 2956 599 ID=Msa1462530;Name=Msa1462530
tig0042344 mRNA 599 2956 599 ID=Msa1462530-mRNA-1;Parent=Msa1462530;Name=Msa1462530-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.75|0.8|1|1|1|5|70|356
tig0042344 exon 599 812 599 ID=Msa1462530-mRNA-1:exon:23691;Parent=Msa1462530-mRNA-1
tig0042344 exon 1392 1519 1392 ID=Msa1462530-mRNA-1:exon:23692;Parent=Msa1462530-mRNA-1
tig0042344 exon 1862 2104 1862 ID=Msa1462530-mRNA-1:exon:23693;Parent=Msa1462530-mRNA-1
tig0042344 exon 2287 2539 2287 ID=Msa1462530-mRNA-1:exon:23694;Parent=Msa1462530-mRNA-1
tig0042344 exon 2654 2956 2654 ID=Msa1462530-mRNA-1:exon:23695;Parent=Msa1462530-mRNA-1
tig0042344 CDS 599 812 599 ID=Msa1462530-mRNA-1:cds;Parent=Msa1462530-mRNA-1
tig0042344 CDS 1392 1519 1392 ID=Msa1462530-mRNA-1:cds;Parent=Msa1462530-mRNA-1
tig0042344 CDS 1862 2104 1862 ID=Msa1462530-mRNA-1:cds;Parent=Msa1462530-mRNA-1
tig0042344 CDS 2287 2539 2287 ID=Msa1462530-mRNA-1:cds;Parent=Msa1462530-mRNA-1
tig0042344 CDS 2654 2886 2654 ID=Msa1462530-mRNA-1:cds;Parent=Msa1462530-mRNA-1
tig0042344 three_prime_UTR 2887 2956 2887 ID=Msa1462530-mRNA-1:three_prime_utr;Parent=Msa1462530-mRNA-1
Gene Sequence

>Msa1462530

ATGGCACCATCTTCAAGTTTTGTTCATATTATGGTAGTTCTTAGTTTAGTTTTGGTGTTAGGTGGTATTGTTCCTAAAGGTGAAGCTAGGAGAAGAGCTTTTTTTGTATTTGGAGATTCACTTGTCGATAATGGAAATAACAACTATTTGCTTACTACTGCTCGTGCTGATTCTCCTCCTTATGGAATTGATTATCCAACTCGTAGACCAACTGGTCAGCAACTTGGAACTGTGTCTACTTTACCATATTTGAGCCCAGAATTAAAAGGGCATAAACTTCTAATTGGTGCCAATTTTGGTTCAGCTGGAATTGGAATCCTTAATGATACAGGAGATCAATTTATAAATGTGGTAAAAATGCATACACAACTGGATTACTTTGAAGAGTATCAACGTCGATTAACGAATTTAATAGGCGGTCGGCGGACTAGAAGACTTGTTAATCAAGCATTGTTTCTCATGACAGTTGGAGGCAATGATTTTGTAAACAACTATTACCTTGTGCCTTCTTCTTCAAGGTCTCGCCAATATCCATTACCACACTATGTCAAGTTCCTCATTTGTGAGTACAGAAAGCACTTACAGAGGCTATATGATTTGGGCGCTCGGCGAGTTCTAGTCACCGGAACAGGACCATTGGGTTGTGCTCCTGCAGAACTCGCTACGCGTAGCAGAAATGGTGAATGCTCGGTGGAACTACAACGTGGTGCAGCATTATACAACCCTCAACTTGAACAAATGTTACAAAGACTCAATAGGAAACTTGGCAGTGACATTTTCATTGCTGCAAATACAGCACAAATGCACAAAGATTTTGTTACTAATCCAACAGCTTATGGATTTGTTACATCAAAAGTAGCTTGTTGTGGGCAAGGACCCTATAATGGCATTGGAGTGTGCACAACATGCTCCAACTTGTGCCCTAACAGAGACTTGTATGTATTTTGGGATCCATTCCATCCATCTGAAAAGGCAAATAGACTTATTGTGGAGCAAATTATGTCAGGTTCAACAAGATACATGAAGCCAATGAACCTTAGCACCATTCTTTCTTTGGATGCTAGCACATGA
Protein sequence

>Msa1462530

MAPSSSFVHIMVVLSLVLVLGGIVPKGEARRRAFFVFGDSLVDNGNNNYLLTTARADSPPYGIDYPTRRPTGQQLGTVSTLPYLSPELKGHKLLIGANFGSAGIGILNDTGDQFINVVKMHTQLDYFEEYQRRLTNLIGGRRTRRLVNQALFLMTVGGNDFVNNYYLVPSSSRSRQYPLPHYVKFLICEYRKHLQRLYDLGARRVLVTGTGPLGCAPAELATRSRNGECSVELQRGAALYNPQLEQMLQRLNRKLGSDIFIAANTAQMHKDFVTNPTAYGFVTSKVACCGQGPYNGIGVCTTCSNLCPNRDLYVFWDPFHPSEKANRLIVEQIMSGSTRYMKPMNLSTILSLDAST*