Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263780 | XP_013465342.1 | 98.440 | 577 | 9 | 0 | 1 | 577 | 160 | 736 | 0.0 | 1182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263780 | sp|Q9FJH9|LPAH1_ARATH | 70.497 | 583 | 156 | 10 | 1 | 577 | 166 | 738 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263780 | A0A072VCA1 | 98.440 | 577 | 9 | 0 | 1 | 577 | 160 | 736 | 0.0 | 1182 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032020 | Msa0263780 | 0.805738 | 1.154666e-49 | -8.615850e-47 |
| Msa0099230 | Msa0263780 | 0.803432 | 3.495310e-49 | -8.615850e-47 |
| Msa0124910 | Msa0263780 | 0.824520 | 7.721229e-54 | -8.615850e-47 |
| Msa0142430 | Msa0263780 | 0.809830 | 1.558329e-50 | -8.615850e-47 |
| Msa0199940 | Msa0263780 | 0.805366 | 1.381885e-49 | -8.615850e-47 |
| Msa0209140 | Msa0263780 | 0.835967 | 1.232351e-56 | -8.615850e-47 |
| Msa0263780 | Msa0281470 | 0.808801 | 2.590111e-50 | -8.615850e-47 |
| Msa0263780 | Msa0288620 | 0.849904 | 2.396871e-60 | -8.615850e-47 |
| Msa0263780 | Msa0301520 | 0.934214 | 5.705029e-96 | -8.615850e-47 |
| Msa0263780 | Msa0319920 | 0.803790 | 2.946354e-49 | -8.615850e-47 |
| Msa0263780 | Msa0326710 | 0.824100 | 9.692928e-54 | -8.615850e-47 |
| Msa0263780 | Msa0339020 | 0.979303 | 1.130645e-147 | -8.615850e-47 |
| Msa0263780 | Msa0430230 | 0.808342 | 3.246971e-50 | -8.615850e-47 |
| Msa0263780 | Msa0479420 | 0.815152 | 1.070381e-51 | -8.615850e-47 |
| Msa0263780 | Msa0515520 | 0.822819 | 1.932045e-53 | -8.615850e-47 |
| Msa0263780 | Msa0519760 | 0.800242 | 1.579764e-48 | -8.615850e-47 |
| Msa0263780 | Msa0519840 | 0.801516 | 8.680617e-49 | -8.615850e-47 |
| Msa0263780 | Msa1074900 | 0.829455 | 5.099147e-55 | -8.615850e-47 |
| Msa0263780 | Msa1078890 | 0.819016 | 1.448798e-52 | -8.615850e-47 |
| Msa0263780 | Msa1082410 | 0.815000 | 1.156942e-51 | -8.615850e-47 |
| Msa0263780 | Msa1165090 | 0.821861 | 3.222833e-53 | -8.615850e-47 |
| Msa0263780 | Msa1169660 | 0.818370 | 2.030714e-52 | -8.615850e-47 |
| Msa0263780 | Msa1207330 | 0.801033 | 1.089968e-48 | -8.615850e-47 |
| Msa0263780 | Msa1257570 | 0.834089 | 3.665438e-56 | -8.615850e-47 |
| Msa0263780 | Msa1327870 | 0.809671 | 1.686131e-50 | -8.615850e-47 |
| Msa0263780 | Msa1331300 | 0.827104 | 1.881043e-54 | -8.615850e-47 |
| Msa0263780 | Msa1365820 | 0.808553 | 2.927287e-50 | -8.615850e-47 |
| Msa0263780 | Msa1368390 | 0.805968 | 1.033288e-49 | -8.615850e-47 |
| Msa0263780 | Msa1373170 | 0.836875 | 7.241905e-57 | -8.615850e-47 |
| Msa0263780 | Msa1383820 | 0.807181 | 5.729569e-50 | -8.615850e-47 |
| Msa0263780 | Msa1385110 | 0.810928 | 9.031091e-51 | -8.615850e-47 |
| Msa0263780 | Msa1391500 | 0.821045 | 4.973748e-53 | -8.615850e-47 |
| Msa0263780 | Msa1398810 | 0.826602 | 2.479850e-54 | -8.615850e-47 |
| Msa0263780 | Msa1427110 | 0.803543 | 3.315204e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263780 | MtrunA17_Chr2g0327141 | 98.440 | 577 | 9 | 0 | 1 | 577 | 160 | 736 | 0.0 | 1182 |
| Msa0263780 | MtrunA17_Chr4g0028591 | 75.321 | 624 | 102 | 6 | 1 | 577 | 159 | 777 | 0.0 | 870 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263780 | AT5G60760.1 | 70.497 | 583 | 156 | 10 | 1 | 577 | 166 | 738 | 0.0 | 764 |
| Msa0263780 | AT3G45090.1 | 65.582 | 584 | 168 | 8 | 1 | 575 | 152 | 711 | 0.0 | 714 |
| Msa0263780 | AT3G45090.2 | 65.582 | 584 | 168 | 8 | 1 | 575 | 133 | 692 | 0.0 | 712 |
| Msa0263780 | AT5G60760.2 | 68.089 | 539 | 156 | 10 | 45 | 577 | 1 | 529 | 0.0 | 676 |
Find 166 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTTGTATTGTTTATTT+TGG | 0.033175 | 2_2:-63485413 | None:intergenic |
| CTCATATTCTTCTTTGCTTA+TGG | 0.145710 | 2_2:+63486686 | Msa0263780:CDS |
| CAAAATATTGAGACTAAAAT+TGG | 0.208827 | 2_2:-63487163 | None:intergenic |
| CCTGGATTGTTCTTATATTT+CGG | 0.237749 | 2_2:-63485354 | None:intergenic |
| TTATCTCTGGTGCTCCTTAA+AGG | 0.248278 | 2_2:+63486814 | Msa0263780:CDS |
| AAAACGTTCTCTTAGTATTT+CGG | 0.271083 | 2_2:+63486755 | Msa0263780:CDS |
| TTCTCTTAGTATTTCGGCTT+TGG | 0.277755 | 2_2:+63486761 | Msa0263780:CDS |
| AAACCAAACTGAAGATTTAC+AGG | 0.301897 | 2_2:-63485781 | None:intergenic |
| TCACAGATTCCTTCCGTTCT+CGG | 0.305369 | 2_2:-63484427 | None:intergenic |
| CTCTGGTACTGGCTCACTTC+TGG | 0.313170 | 2_2:-63486655 | None:intergenic |
| AACAGTCTGTGCAATGAAAT+TGG | 0.314907 | 2_2:+63487048 | Msa0263780:three_prime_UTR |
| TTAATTAGAAGAGCACATTT+TGG | 0.315374 | 2_2:-63487076 | None:intergenic |
| ATGCAAGATGTGCCTGAAAA+TGG | 0.315979 | 2_2:+63486516 | Msa0263780:CDS |
| ACCTCTCATCATGTGCCTAA+TGG | 0.317708 | 2_2:-63484724 | None:intergenic |
| ATCCACATTGTCTGCATTGC+TGG | 0.319391 | 2_2:+63484484 | Msa0263780:CDS |
| CCTTCAGTTGCTTCATCCTT+AGG | 0.320856 | 2_2:-63484882 | None:intergenic |
| ACTGTAACGGGAAGCCTGTT+TGG | 0.324719 | 2_2:+63485692 | Msa0263780:CDS |
| AGGTTCTTCAAGGCATCTTA+TGG | 0.326882 | 2_2:+63485615 | Msa0263780:CDS |
| CTGGCTCACTTCTGGTTCTA+AGG | 0.338652 | 2_2:-63486647 | None:intergenic |
| CTGTAACGGGAAGCCTGTTT+GGG | 0.339033 | 2_2:+63485693 | Msa0263780:CDS |
| CGGGTATCCTACTACCTTTA+AGG | 0.342965 | 2_2:-63486828 | None:intergenic |
| GTCTACGTAGGCGTGAAGTT+GGG | 0.346299 | 2_2:+63485476 | Msa0263780:CDS |
| GGCTTGGCCTGTTAATTCAT+TGG | 0.346391 | 2_2:+63485669 | Msa0263780:CDS |
| TTTGCTTCTGCAACAGCAAC+AGG | 0.348963 | 2_2:-63484813 | None:intergenic |
| AAAAGGAAAACCCCTTGTTA+TGG | 0.366934 | 2_2:+63484757 | Msa0263780:CDS |
| TTCCAAATTACCTCCTTTGA+AGG | 0.370308 | 2_2:-63485940 | None:intergenic |
| TCTCTTAGTATTTCGGCTTT+GGG | 0.377435 | 2_2:+63486762 | Msa0263780:CDS |
| GAACCTGTAAATCTTCAGTT+TGG | 0.379325 | 2_2:+63485778 | Msa0263780:CDS |
| AACGGACAAGAGAATGAAAT+TGG | 0.389900 | 2_2:+63485718 | Msa0263780:CDS |
| TTAATTCATTGGACTGTAAC+GGG | 0.395016 | 2_2:+63485680 | Msa0263780:CDS |
| TTGCAGAAGCAAAGGCAAAA+AGG | 0.405441 | 2_2:+63484823 | Msa0263780:CDS |
| TCTTGTCCGTTGCCCCAAAC+AGG | 0.407663 | 2_2:-63485706 | None:intergenic |
| TAGATAGGCTAATCACTTCA+TGG | 0.408630 | 2_2:+63485030 | Msa0263780:CDS |
| TTACAGTCCAATGAATTAAC+AGG | 0.413116 | 2_2:-63485676 | None:intergenic |
| AAAGGAAAACCCCTTGTTAT+GGG | 0.413866 | 2_2:+63484758 | Msa0263780:CDS |
| TGATGAAGAGTATGATGATT+TGG | 0.426682 | 2_2:+63486491 | Msa0263780:CDS |
| GCCAATTCTTTGAGCTCAAA+AGG | 0.427730 | 2_2:+63485568 | Msa0263780:CDS |
| CAAGAATTTGAATAAAGAAC+GGG | 0.430856 | 2_2:-63486847 | None:intergenic |
| GTCAATCACCATTTCACTCT+GGG | 0.431639 | 2_2:-63485003 | None:intergenic |
| ATGTATGGACCCTTGCGAAT+TGG | 0.431877 | 2_2:+63485748 | Msa0263780:CDS |
| AGTATTTCGGCTTTGGGAAA+AGG | 0.436131 | 2_2:+63486768 | Msa0263780:CDS |
| TTGTATCAACTGATTCCATT+AGG | 0.437901 | 2_2:+63484709 | Msa0263780:CDS |
| CAGACGATGATGAAGAGTTC+AGG | 0.441179 | 2_2:+63486547 | Msa0263780:CDS |
| TGGTTCTAAGGAAGAGATCC+AGG | 0.441204 | 2_2:-63486635 | None:intergenic |
| AGAGATTGACGATCAATTAG+AGG | 0.446341 | 2_2:+63486121 | Msa0263780:CDS |
| AAAGAGTCCGTTGTTGTTGA+GGG | 0.454342 | 2_2:+63485062 | Msa0263780:CDS |
| ACGGCTTGTACCACCATCAC+AGG | 0.454529 | 2_2:-63485824 | None:intergenic |
| TTTACTTCAGGGAAGTCGGC+TGG | 0.454573 | 2_2:+63484674 | Msa0263780:intron |
| GAAGGTCCATTAGACATCCT+TGG | 0.458417 | 2_2:-63485922 | None:intergenic |
| GAGCAGAAGGACTCTGGTAC+TGG | 0.458591 | 2_2:-63486666 | None:intergenic |
| TCAAAACAAATGGCTGTTGA+AGG | 0.458698 | 2_2:+63484972 | Msa0263780:CDS |
| TACAAACGAGGACAAGCATA+TGG | 0.464129 | 2_2:+63485264 | Msa0263780:CDS |
| TAAGGAGCACCAGAGATAAT+CGG | 0.465485 | 2_2:-63486810 | None:intergenic |
| TGTCTACGTAGGCGTGAAGT+TGG | 0.466397 | 2_2:+63485475 | Msa0263780:CDS |
| ACGGTTGAATTCAAAACAAA+TGG | 0.467216 | 2_2:+63484962 | Msa0263780:CDS |
| GAAATTGGAAGTCCAATGTA+TGG | 0.467322 | 2_2:+63485733 | Msa0263780:CDS |
| TGGTGATTGACAGCCTAGAT+AGG | 0.467728 | 2_2:+63485015 | Msa0263780:CDS |
| ATGAAGTGATTAGCCTATCT+AGG | 0.468436 | 2_2:-63485028 | None:intergenic |
| CTACCATGCAGGCGAGTGCT+TGG | 0.468831 | 2_2:+63484788 | Msa0263780:CDS |
| AGTTCACCAAGGATGTCTAA+TGG | 0.470907 | 2_2:+63485916 | Msa0263780:CDS |
| AGCCGTGCTGGAAGTGTTGA+TGG | 0.472107 | 2_2:+63485841 | Msa0263780:CDS |
| TGTCAATCACCATTTCACTC+TGG | 0.474547 | 2_2:-63485004 | None:intergenic |
| ATGGGTCTGTGGCAAAGGCT+TGG | 0.479631 | 2_2:+63485653 | Msa0263780:CDS |
| CCGAAATATAAGAACAATCC+AGG | 0.483387 | 2_2:+63485354 | Msa0263780:CDS |
| TACTGATGGGTCTGTGGCAA+AGG | 0.483642 | 2_2:+63485648 | Msa0263780:CDS |
| CAAATTTGATATACATACAT+TGG | 0.486148 | 2_2:+63484917 | Msa0263780:CDS |
| TTCAGGAGTAAAGTCACTAT+TGG | 0.486448 | 2_2:+63486564 | Msa0263780:CDS |
| ATGGCTCTTGTAAATACTGA+TGG | 0.489629 | 2_2:+63485634 | Msa0263780:CDS |
| AGGGCTATGGTGCGCCTGAA+CGG | 0.491565 | 2_2:+63484943 | Msa0263780:CDS |
| GTCCAGGATCCGATTATCTC+TGG | 0.491772 | 2_2:+63486801 | Msa0263780:CDS |
| GAGTAAAGTCACTATTGGTC+AGG | 0.492599 | 2_2:+63486569 | Msa0263780:CDS |
| AATGGCTGTTGAAGGATTCA+AGG | 0.492654 | 2_2:+63484980 | Msa0263780:CDS |
| ATCATGAAGGGTATGATTGA+AGG | 0.493705 | 2_2:-63485235 | None:intergenic |
| TCCAACGACAAGGTTCTTCA+AGG | 0.494210 | 2_2:+63485605 | Msa0263780:CDS |
| GAAAGGCGACTGCCACCATC+GGG | 0.494755 | 2_2:+63486717 | Msa0263780:CDS |
| GGGAAGCCTGTTTGGGGCAA+CGG | 0.504559 | 2_2:+63485700 | Msa0263780:CDS |
| TTGTGTGGAACTAGTGGTTG+TGG | 0.507100 | 2_2:+63484458 | Msa0263780:CDS |
| ATCAGTGCTTGGCCCTGTGA+TGG | 0.507551 | 2_2:+63485811 | Msa0263780:CDS |
| TCGACCCGCTGTCTATAGTA+AGG | 0.509570 | 2_2:+63486934 | Msa0263780:three_prime_UTR |
| TGAAAGGCGACTGCCACCAT+CGG | 0.509706 | 2_2:+63486716 | Msa0263780:CDS |
| TTCTGCCTTTCCAATTCGCA+AGG | 0.509708 | 2_2:-63485758 | None:intergenic |
| ATTCAAGGCCCAGAGTGAAA+TGG | 0.509904 | 2_2:+63484995 | Msa0263780:CDS |
| AAAAGGTAGTTCCACAGTCC+AGG | 0.510034 | 2_2:+63486785 | Msa0263780:CDS |
| GAAAGAGTCCGTTGTTGTTG+AGG | 0.513487 | 2_2:+63485061 | Msa0263780:CDS |
| GTTTGTAATGTATATCATGA+AGG | 0.517075 | 2_2:-63485248 | None:intergenic |
| TGGTGCTCCTTAAAGGTAGT+AGG | 0.518406 | 2_2:+63486821 | Msa0263780:exon |
| AAAGACATAGGAGGAAAAGT+TGG | 0.519640 | 2_2:-63486879 | None:intergenic |
| CTCGCCTGCATGGTAGGTAG+AGG | 0.520594 | 2_2:-63484781 | None:intergenic |
| CACCAGAGATAATCGGATCC+TGG | 0.522266 | 2_2:-63486803 | None:intergenic |
| GGTCATATACTTTGCACGTA+CGG | 0.523998 | 2_2:-63485296 | None:intergenic |
| TGATATACATACATTGGAGG+AGG | 0.525323 | 2_2:+63484923 | Msa0263780:CDS |
| GTTAATTCATTGGACTGTAA+CGG | 0.525621 | 2_2:+63485679 | Msa0263780:CDS |
| TTACTTCAGGGAAGTCGGCT+GGG | 0.528445 | 2_2:+63484675 | Msa0263780:intron |
| GCCTTGAAGAACCTTGTCGT+TGG | 0.530513 | 2_2:-63485606 | None:intergenic |
| ATGTGCCTGAAAATGGATAT+TGG | 0.531952 | 2_2:+63486523 | Msa0263780:CDS |
| GATGGTGGTACAAGCCGTGC+TGG | 0.535630 | 2_2:+63485829 | Msa0263780:CDS |
| GATGTCTAATGGACCTTCAA+AGG | 0.536687 | 2_2:+63485927 | Msa0263780:CDS |
| CAAGCACTCGCCTGCATGGT+AGG | 0.537165 | 2_2:-63484787 | None:intergenic |
| CAAAGAAGAATATGAGCAGA+AGG | 0.537361 | 2_2:-63486679 | None:intergenic |
| CCCGCTTACAGAGATAATCC+TGG | 0.537820 | 2_2:-63485372 | None:intergenic |
| TCAAGAATTTGAATAAAGAA+CGG | 0.540320 | 2_2:-63486848 | None:intergenic |
| TATCTTTACTTCAGGGAAGT+CGG | 0.544400 | 2_2:+63484670 | Msa0263780:intron |
| TCTACGTAGGCGTGAAGTTG+GGG | 0.545231 | 2_2:+63485477 | Msa0263780:CDS |
| ACAGTTACAATATTTCTACT+AGG | 0.546845 | 2_2:-63485514 | None:intergenic |
| TATTGTAACTGTTATTGATG+AGG | 0.548008 | 2_2:+63485525 | Msa0263780:CDS |
| GAATATGAGCAGAAGGACTC+TGG | 0.551897 | 2_2:-63486672 | None:intergenic |
| CATCCTTGGTGAACTACAGC+AGG | 0.559058 | 2_2:-63485908 | None:intergenic |
| ATTCGCAAGGGTCCATACAT+TGG | 0.559226 | 2_2:-63485745 | None:intergenic |
| GACAGCTGAACACGGTAGCA+TGG | 0.563904 | 2_2:-63485456 | None:intergenic |
| GACCTAGGAGCTAAAATGCA+TGG | 0.567487 | 2_2:+63486594 | Msa0263780:CDS |
| CATACATTGGAGGAGGGCTA+TGG | 0.569004 | 2_2:+63484930 | Msa0263780:CDS |
| GCTGAACACGGTAGCATGGA+TGG | 0.569665 | 2_2:-63485452 | None:intergenic |
| AATAAAGTATCGTCAAAACC+TGG | 0.571639 | 2_2:+63486617 | Msa0263780:CDS |
| ATTTGATATACATACATTGG+AGG | 0.572652 | 2_2:+63484920 | Msa0263780:CDS |
| TGTATCACAGTCACTACCTA+AGG | 0.574464 | 2_2:+63484866 | Msa0263780:CDS |
| TCCATTAGGCACATGATGAG+AGG | 0.576166 | 2_2:+63484723 | Msa0263780:CDS |
| TGGACCCTTGCGAATTGGAA+AGG | 0.577190 | 2_2:+63485753 | Msa0263780:CDS |
| TGGCTCTTGTAAATACTGAT+GGG | 0.577802 | 2_2:+63485635 | Msa0263780:CDS |
| AGTGCTTGGCCCTGTGATGG+TGG | 0.579014 | 2_2:+63485814 | Msa0263780:CDS |
| ACCCATCAACACTTCCAGCA+CGG | 0.579152 | 2_2:-63485843 | None:intergenic |
| AAAGAGGATCTTTCAGTGCA+TGG | 0.580123 | 2_2:+63486086 | Msa0263780:CDS |
| TAATCACTTCATGGGAAGAA+CGG | 0.581096 | 2_2:+63485039 | Msa0263780:CDS |
| TGTAAATACTGATGGGTCTG+TGG | 0.581623 | 2_2:+63485642 | Msa0263780:CDS |
| GATCCAAGCACTCGCCTGCA+TGG | 0.584950 | 2_2:-63484791 | None:intergenic |
| AGATAGGCTAATCACTTCAT+GGG | 0.585196 | 2_2:+63485031 | Msa0263780:CDS |
| TGGCAGAATCCGAGAACGGA+AGG | 0.586710 | 2_2:+63484418 | None:intergenic |
| TTTGTAATGTATATCATGAA+GGG | 0.588784 | 2_2:-63485247 | None:intergenic |
| GTAGGTAGAGGCCCATAACA+AGG | 0.589281 | 2_2:-63484769 | None:intergenic |
| CCAGGATTATCTCTGTAAGC+GGG | 0.595925 | 2_2:+63485372 | Msa0263780:CDS |
| TGTTGCTGTTGCAGAAGCAA+AGG | 0.598918 | 2_2:+63484815 | Msa0263780:CDS |
| ATTGACGATCAATTAGAGGC+GGG | 0.599944 | 2_2:+63486125 | Msa0263780:CDS |
| GATATACATACATTGGAGGA+GGG | 0.609413 | 2_2:+63484924 | Msa0263780:CDS |
| TTGATGGCAGAATCCGAGAA+CGG | 0.610169 | 2_2:+63484414 | None:intergenic |
| TCCAGGATTATCTCTGTAAG+CGG | 0.613865 | 2_2:+63485371 | Msa0263780:CDS |
| TTCCACAAGCCAAAAGACAT+AGG | 0.614495 | 2_2:-63486891 | None:intergenic |
| TCTGCCTTTCCAATTCGCAA+GGG | 0.615208 | 2_2:-63485757 | None:intergenic |
| TGGGCCTCTACCTACCATGC+AGG | 0.628618 | 2_2:+63484777 | Msa0263780:CDS |
| ACTATTGGTCAGGAGGACCT+AGG | 0.634344 | 2_2:+63486579 | Msa0263780:CDS |
| TTTCAATTGATCCAACGACA+AGG | 0.637195 | 2_2:+63485595 | Msa0263780:CDS |
| TAAAGTCACTATTGGTCAGG+AGG | 0.638531 | 2_2:+63486572 | Msa0263780:CDS |
| GAGACCTTACTATAGACAGC+GGG | 0.639969 | 2_2:-63486938 | None:intergenic |
| GATTGACGATCAATTAGAGG+CGG | 0.640872 | 2_2:+63486124 | Msa0263780:CDS |
| TACCAGCAATGCAGACAATG+TGG | 0.642022 | 2_2:-63484486 | None:intergenic |
| CACAAGCCAAAAGACATAGG+AGG | 0.643753 | 2_2:-63486888 | None:intergenic |
| TAGGTAGAGGCCCATAACAA+GGG | 0.649521 | 2_2:-63484768 | None:intergenic |
| CGGCTTGTACCACCATCACA+GGG | 0.651241 | 2_2:-63485823 | None:intergenic |
| GATAATCGGATCCTGGACTG+TGG | 0.652520 | 2_2:-63486796 | None:intergenic |
| GTGAACACCCTCAACAACAA+CGG | 0.652680 | 2_2:-63485069 | None:intergenic |
| GTCTAATGGACCTTCAAAGG+AGG | 0.657757 | 2_2:+63485930 | Msa0263780:CDS |
| GCCGTGCTGGAAGTGTTGAT+GGG | 0.657937 | 2_2:+63485842 | Msa0263780:CDS |
| TGACAAACATATTCATGAGG+AGG | 0.662652 | 2_2:+63486175 | Msa0263780:CDS |
| GCAGGTAGGTTCAGTTGACG+AGG | 0.662928 | 2_2:+63486455 | Msa0263780:intron |
| CCTACGTAGACAGCTGAACA+CGG | 0.663448 | 2_2:-63485464 | None:intergenic |
| TGTAACGGGAAGCCTGTTTG+GGG | 0.664009 | 2_2:+63485694 | Msa0263780:CDS |
| CCTAAGGATGAAGCAACTGA+AGG | 0.664976 | 2_2:+63484882 | Msa0263780:CDS |
| AGGTAGAGGCCCATAACAAG+GGG | 0.666875 | 2_2:-63484767 | None:intergenic |
| ATGTATATCAAATTTGCTAG+AGG | 0.668336 | 2_2:-63484910 | None:intergenic |
| CCTTGGTGAACTACAGCAGG+AGG | 0.674184 | 2_2:-63485905 | None:intergenic |
| ACGTGCAAAGTATATGACCC+TGG | 0.674761 | 2_2:+63485300 | Msa0263780:CDS |
| CCTCCTGCTGTAGTTCACCA+AGG | 0.677292 | 2_2:+63485905 | Msa0263780:CDS |
| TGGTGACAAACATATTCATG+AGG | 0.691512 | 2_2:+63486172 | Msa0263780:CDS |
| CATGATATACATTACAAACG+AGG | 0.701869 | 2_2:+63485252 | Msa0263780:CDS |
| CCGTGTTCAGCTGTCTACGT+AGG | 0.710567 | 2_2:+63485464 | Msa0263780:CDS |
| AAAGCTGATGAGACTGACAC+AGG | 0.713134 | 2_2:+63485868 | Msa0263780:CDS |
| GATGATGATTTCAGTGACGA+TGG | 0.716981 | 2_2:+63486152 | Msa0263780:CDS |
| AGAGACCTTACTATAGACAG+CGG | 0.751875 | 2_2:-63486939 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTGTATTGTTTATTTT+GGG | - | chr2_2:63485415-63485434 | None:intergenic | 15.0% |
| !!! | AACATTTGTATTGTTTATTT+TGG | - | chr2_2:63485416-63485435 | None:intergenic | 15.0% |
| !!! | ATATCAAAACTATTTTGTTT+TGG | + | chr2_2:63486969-63486988 | Msa0263780:three_prime_UTR | 15.0% |
| !! | TTAAACTGTAAAGATATACA+TGG | - | chr2_2:63484632-63484651 | None:intergenic | 20.0% |
| !! | TCTATTTATATCTTTACTTC+AGG | + | chr2_2:63484662-63484681 | Msa0263780:intron | 20.0% |
| !! | CTATTTATATCTTTACTTCA+GGG | + | chr2_2:63484663-63484682 | Msa0263780:intron | 20.0% |
| !! | CAAATTTGATATACATACAT+TGG | + | chr2_2:63484917-63484936 | Msa0263780:CDS | 20.0% |
| !! | TTTGTAATGTATATCATGAA+GGG | - | chr2_2:63485250-63485269 | None:intergenic | 20.0% |
| !!! | TTACATATTTGTTTTTAGCA+GGG | - | chr2_2:63485327-63485346 | None:intergenic | 20.0% |
| !!! | TTTACATATTTGTTTTTAGC+AGG | - | chr2_2:63485328-63485347 | None:intergenic | 20.0% |
| !! | TAAAATATATAGCAAAAAGG+GGG | - | chr2_2:63486062-63486081 | None:intergenic | 20.0% |
| !! | CTAAAATATATAGCAAAAAG+GGG | - | chr2_2:63486063-63486082 | None:intergenic | 20.0% |
| !! | GCTAAAATATATAGCAAAAA+GGG | - | chr2_2:63486064-63486083 | None:intergenic | 20.0% |
| !! | AGCTAAAATATATAGCAAAA+AGG | - | chr2_2:63486065-63486084 | None:intergenic | 20.0% |
| !!! | AATATACATGCATTTTAGAT+AGG | - | chr2_2:63486215-63486234 | None:intergenic | 20.0% |
| !! | CTAAAATGCATGTATATTTA+AGG | + | chr2_2:63486217-63486236 | Msa0263780:intron | 20.0% |
| !! | AAAGTTCATAAATATACACA+AGG | - | chr2_2:63486355-63486374 | None:intergenic | 20.0% |
| !! | ATTATAACTCAATTAAGCTA+TGG | - | chr2_2:63486386-63486405 | None:intergenic | 20.0% |
| !! | ATAGCTTAATTGAGTTATAA+TGG | + | chr2_2:63486385-63486404 | Msa0263780:intron | 20.0% |
| !! | TTAATTGAGTTATAATGGTA+TGG | + | chr2_2:63486390-63486409 | Msa0263780:intron | 20.0% |
| !! | TCAAGAATTTGAATAAAGAA+CGG | - | chr2_2:63486851-63486870 | None:intergenic | 20.0% |
| !!! | TTTTGCTATAACCAATATGT+AGG | + | chr2_2:63484538-63484557 | Msa0263780:intron | 25.0% |
| !! | TTTGCTATAACCAATATGTA+GGG | + | chr2_2:63484539-63484558 | Msa0263780:intron | 25.0% |
| !!! | ATGTATATCAAATTTGCTAG+AGG | - | chr2_2:63484913-63484932 | None:intergenic | 25.0% |
| ! | ATTTGATATACATACATTGG+AGG | + | chr2_2:63484920-63484939 | Msa0263780:CDS | 25.0% |
| ! | GTTTGTAATGTATATCATGA+AGG | - | chr2_2:63485251-63485270 | None:intergenic | 25.0% |
| !! | ACAGTTACAATATTTCTACT+AGG | - | chr2_2:63485517-63485536 | None:intergenic | 25.0% |
| ! | TATTGTAACTGTTATTGATG+AGG | + | chr2_2:63485525-63485544 | Msa0263780:CDS | 25.0% |
| !!! | AATCTTCAGTTTGGTTTTTA+TGG | + | chr2_2:63485787-63485806 | Msa0263780:CDS | 25.0% |
| !!! | ATCTTCAGTTTGGTTTTTAT+GGG | + | chr2_2:63485788-63485807 | Msa0263780:CDS | 25.0% |
| ! | TCTGTTCAACATGAAAATAA+TGG | + | chr2_2:63485978-63485997 | Msa0263780:intron | 25.0% |
| ! | AAAATATATAGCAAAAAGGG+GGG | - | chr2_2:63486061-63486080 | None:intergenic | 25.0% |
| !!! | CTATATATTTTAGCTCAAAG+AGG | + | chr2_2:63486070-63486089 | Msa0263780:intron | 25.0% |
| ! | AAAACGTTCTCTTAGTATTT+CGG | + | chr2_2:63486755-63486774 | Msa0263780:CDS | 25.0% |
| ! | CAAGAATTTGAATAAAGAAC+GGG | - | chr2_2:63486850-63486869 | None:intergenic | 25.0% |
| !!! | ACTATTTTGTTTTGGTATAG+AGG | + | chr2_2:63486977-63486996 | Msa0263780:three_prime_UTR | 25.0% |
| !!! | TTAATTAGAAGAGCACATTT+TGG | - | chr2_2:63487079-63487098 | None:intergenic | 25.0% |
| ! | TTGTATCAACTGATTCCATT+AGG | + | chr2_2:63484709-63484728 | Msa0263780:CDS | 30.0% |
| ACGGTTGAATTCAAAACAAA+TGG | + | chr2_2:63484962-63484981 | Msa0263780:CDS | 30.0% | |
| TTACTTAATGTCATGCAGAT+GGG | + | chr2_2:63485196-63485215 | Msa0263780:intron | 30.0% | |
| CATGATATACATTACAAACG+AGG | + | chr2_2:63485252-63485271 | Msa0263780:CDS | 30.0% | |
| CCTGGATTGTTCTTATATTT+CGG | - | chr2_2:63485357-63485376 | None:intergenic | 30.0% | |
| TTACAGTCCAATGAATTAAC+AGG | - | chr2_2:63485679-63485698 | None:intergenic | 30.0% | |
| GTTAATTCATTGGACTGTAA+CGG | + | chr2_2:63485679-63485698 | Msa0263780:CDS | 30.0% | |
| TTAATTCATTGGACTGTAAC+GGG | + | chr2_2:63485680-63485699 | Msa0263780:CDS | 30.0% | |
| AAACCAAACTGAAGATTTAC+AGG | - | chr2_2:63485784-63485803 | None:intergenic | 30.0% | |
| !! | AATGGCTTGTTTGTATCAAA+TGG | + | chr2_2:63485996-63486015 | Msa0263780:intron | 30.0% |
| !! | ATGGCTTGTTTGTATCAAAT+GGG | + | chr2_2:63485997-63486016 | Msa0263780:intron | 30.0% |
| !!! | TATACTTTTTCATGTTGTGC+AGG | + | chr2_2:63486437-63486456 | Msa0263780:intron | 30.0% |
| ! | TGATGAAGAGTATGATGATT+TGG | + | chr2_2:63486491-63486510 | Msa0263780:CDS | 30.0% |
| !! | AATAAAGTATCGTCAAAACC+TGG | + | chr2_2:63486617-63486636 | Msa0263780:CDS | 30.0% |
| CTCATATTCTTCTTTGCTTA+TGG | + | chr2_2:63486686-63486705 | Msa0263780:CDS | 30.0% | |
| TGGAAAAAAAGTTGAGCATT+CGG | - | chr2_2:63487146-63487165 | None:intergenic | 30.0% | |
| TATCTTTACTTCAGGGAAGT+CGG | + | chr2_2:63484670-63484689 | Msa0263780:intron | 35.0% | |
| ! | GAGAGGTTTTGCTAATGAAA+AGG | + | chr2_2:63484740-63484759 | Msa0263780:CDS | 35.0% |
| AAAAGGAAAACCCCTTGTTA+TGG | + | chr2_2:63484757-63484776 | Msa0263780:CDS | 35.0% | |
| ! | AAAGGAAAACCCCTTGTTAT+GGG | + | chr2_2:63484758-63484777 | Msa0263780:CDS | 35.0% |
| AAAAAGGAGAGCGAAAAAGA+TGG | + | chr2_2:63484839-63484858 | Msa0263780:CDS | 35.0% | |
| TGATATACATACATTGGAGG+AGG | + | chr2_2:63484923-63484942 | Msa0263780:CDS | 35.0% | |
| GATATACATACATTGGAGGA+GGG | + | chr2_2:63484924-63484943 | Msa0263780:CDS | 35.0% | |
| !! | TGTTTTGAATTCAACCGTTC+AGG | - | chr2_2:63484960-63484979 | None:intergenic | 35.0% |
| TCAAAACAAATGGCTGTTGA+AGG | + | chr2_2:63484972-63484991 | Msa0263780:CDS | 35.0% | |
| !! | ATGAAGTGATTAGCCTATCT+AGG | - | chr2_2:63485031-63485050 | None:intergenic | 35.0% |
| TAGATAGGCTAATCACTTCA+TGG | + | chr2_2:63485030-63485049 | Msa0263780:CDS | 35.0% | |
| AGATAGGCTAATCACTTCAT+GGG | + | chr2_2:63485031-63485050 | Msa0263780:CDS | 35.0% | |
| TAATCACTTCATGGGAAGAA+CGG | + | chr2_2:63485039-63485058 | Msa0263780:CDS | 35.0% | |
| TGTTGTATGTCTCATTCTCT+TGG | + | chr2_2:63485106-63485125 | Msa0263780:intron | 35.0% | |
| GTTGTATGTCTCATTCTCTT+GGG | + | chr2_2:63485107-63485126 | Msa0263780:intron | 35.0% | |
| CTTACTTAATGTCATGCAGA+TGG | + | chr2_2:63485195-63485214 | Msa0263780:intron | 35.0% | |
| TACTTAATGTCATGCAGATG+GGG | + | chr2_2:63485197-63485216 | Msa0263780:intron | 35.0% | |
| ! | ATCATGAAGGGTATGATTGA+AGG | - | chr2_2:63485238-63485257 | None:intergenic | 35.0% |
| CCGAAATATAAGAACAATCC+AGG | + | chr2_2:63485354-63485373 | Msa0263780:CDS | 35.0% | |
| ! | TTTTGAGCTCAAAGAATTGG+CGG | - | chr2_2:63485569-63485588 | None:intergenic | 35.0% |
| ! | TCCTTTTGAGCTCAAAGAAT+TGG | - | chr2_2:63485572-63485591 | None:intergenic | 35.0% |
| TTTCAATTGATCCAACGACA+AGG | + | chr2_2:63485595-63485614 | Msa0263780:CDS | 35.0% | |
| ATGGCTCTTGTAAATACTGA+TGG | + | chr2_2:63485634-63485653 | Msa0263780:CDS | 35.0% | |
| TGGCTCTTGTAAATACTGAT+GGG | + | chr2_2:63485635-63485654 | Msa0263780:CDS | 35.0% | |
| AACGGACAAGAGAATGAAAT+TGG | + | chr2_2:63485718-63485737 | Msa0263780:CDS | 35.0% | |
| GAAATTGGAAGTCCAATGTA+TGG | + | chr2_2:63485733-63485752 | Msa0263780:CDS | 35.0% | |
| GAACCTGTAAATCTTCAGTT+TGG | + | chr2_2:63485778-63485797 | Msa0263780:CDS | 35.0% | |
| TTCCAAATTACCTCCTTTGA+AGG | - | chr2_2:63485943-63485962 | None:intergenic | 35.0% | |
| AGAGATTGACGATCAATTAG+AGG | + | chr2_2:63486121-63486140 | Msa0263780:CDS | 35.0% | |
| TGGTGACAAACATATTCATG+AGG | + | chr2_2:63486172-63486191 | Msa0263780:CDS | 35.0% | |
| TGACAAACATATTCATGAGG+AGG | + | chr2_2:63486175-63486194 | Msa0263780:CDS | 35.0% | |
| ATGGTTGAGACTCTGAATTT+GGG | - | chr2_2:63486250-63486269 | None:intergenic | 35.0% | |
| AATGGTTGAGACTCTGAATT+TGG | - | chr2_2:63486251-63486270 | None:intergenic | 35.0% | |
| AATTCAGAGTCTCAACCATT+TGG | + | chr2_2:63486251-63486270 | Msa0263780:intron | 35.0% | |
| ATTCAGAGTCTCAACCATTT+GGG | + | chr2_2:63486252-63486271 | Msa0263780:intron | 35.0% | |
| AAATATACACAAGGCAACTG+AGG | - | chr2_2:63486346-63486365 | None:intergenic | 35.0% | |
| ATGTGCCTGAAAATGGATAT+TGG | + | chr2_2:63486523-63486542 | Msa0263780:CDS | 35.0% | |
| ! | TCTGACCAATATCCATTTTC+AGG | - | chr2_2:63486531-63486550 | None:intergenic | 35.0% |
| TTCAGGAGTAAAGTCACTAT+TGG | + | chr2_2:63486564-63486583 | Msa0263780:CDS | 35.0% | |
| CAAAGAAGAATATGAGCAGA+AGG | - | chr2_2:63486682-63486701 | None:intergenic | 35.0% | |
| TGCTTATGGAAAAAGCTGAA+AGG | + | chr2_2:63486700-63486719 | Msa0263780:CDS | 35.0% | |
| TTCTCTTAGTATTTCGGCTT+TGG | + | chr2_2:63486761-63486780 | Msa0263780:CDS | 35.0% | |
| TCTCTTAGTATTTCGGCTTT+GGG | + | chr2_2:63486762-63486781 | Msa0263780:CDS | 35.0% | |
| AAAGACATAGGAGGAAAAGT+TGG | - | chr2_2:63486882-63486901 | None:intergenic | 35.0% | |
| ! | ACTTTTCCTCCTATGTCTTT+TGG | + | chr2_2:63486882-63486901 | Msa0263780:three_prime_UTR | 35.0% |
| AACAGTCTGTGCAATGAAAT+TGG | + | chr2_2:63487048-63487067 | Msa0263780:three_prime_UTR | 35.0% | |
| TGCCACAAACTAAGCAAAAC+TGG | - | chr2_2:63484565-63484584 | None:intergenic | 40.0% | |
| !!! | AGTTTTGCTTAGTTTGTGGC+AGG | + | chr2_2:63484564-63484583 | Msa0263780:intron | 40.0% |
| TTGCAGAAGCAAAGGCAAAA+AGG | + | chr2_2:63484823-63484842 | Msa0263780:CDS | 40.0% | |
| TGTATCACAGTCACTACCTA+AGG | + | chr2_2:63484866-63484885 | Msa0263780:CDS | 40.0% | |
| AATGGCTGTTGAAGGATTCA+AGG | + | chr2_2:63484980-63484999 | Msa0263780:CDS | 40.0% | |
| GTCAATCACCATTTCACTCT+GGG | - | chr2_2:63485006-63485025 | None:intergenic | 40.0% | |
| TGTCAATCACCATTTCACTC+TGG | - | chr2_2:63485007-63485026 | None:intergenic | 40.0% | |
| ! | AAAGAGTCCGTTGTTGTTGA+GGG | + | chr2_2:63485062-63485081 | Msa0263780:CDS | 40.0% |
| TTGGGTCGTTCAATACTTCT+TGG | + | chr2_2:63485125-63485144 | Msa0263780:intron | 40.0% | |
| TACAAACGAGGACAAGCATA+TGG | + | chr2_2:63485264-63485283 | Msa0263780:CDS | 40.0% | |
| GGTCATATACTTTGCACGTA+CGG | - | chr2_2:63485299-63485318 | None:intergenic | 40.0% | |
| !!! | TTTGTTTTTAGCAGGGTCCA+GGG | - | chr2_2:63485320-63485339 | None:intergenic | 40.0% |
| !!! | ATTTGTTTTTAGCAGGGTCC+AGG | - | chr2_2:63485321-63485340 | None:intergenic | 40.0% |
| TCCAGGATTATCTCTGTAAG+CGG | + | chr2_2:63485371-63485390 | Msa0263780:CDS | 40.0% | |
| GCCAATTCTTTGAGCTCAAA+AGG | + | chr2_2:63485568-63485587 | Msa0263780:CDS | 40.0% | |
| ! | AGGTTCTTCAAGGCATCTTA+TGG | + | chr2_2:63485615-63485634 | Msa0263780:CDS | 40.0% |
| ! | TGTAAATACTGATGGGTCTG+TGG | + | chr2_2:63485642-63485661 | Msa0263780:CDS | 40.0% |
| ! | GTTTTTATGGGATCAGTGCT+TGG | + | chr2_2:63485800-63485819 | Msa0263780:CDS | 40.0% |
| AGTTCACCAAGGATGTCTAA+TGG | + | chr2_2:63485916-63485935 | Msa0263780:CDS | 40.0% | |
| ! | GATGTCTAATGGACCTTCAA+AGG | + | chr2_2:63485927-63485946 | Msa0263780:CDS | 40.0% |
| GACCTTCAAAGGAGGTAATT+TGG | + | chr2_2:63485938-63485957 | Msa0263780:intron | 40.0% | |
| AAAGAGGATCTTTCAGTGCA+TGG | + | chr2_2:63486086-63486105 | Msa0263780:CDS | 40.0% | |
| GATTGACGATCAATTAGAGG+CGG | + | chr2_2:63486124-63486143 | Msa0263780:CDS | 40.0% | |
| ATTGACGATCAATTAGAGGC+GGG | + | chr2_2:63486125-63486144 | Msa0263780:CDS | 40.0% | |
| GATGATGATTTCAGTGACGA+TGG | + | chr2_2:63486152-63486171 | Msa0263780:CDS | 40.0% | |
| TTCATTGCCTTTGCAAGCAT+AGG | - | chr2_2:63486281-63486300 | None:intergenic | 40.0% | |
| !! | CTTTTTCATGTTGTGCAGGT+AGG | + | chr2_2:63486441-63486460 | Msa0263780:intron | 40.0% |
| ATGCAAGATGTGCCTGAAAA+TGG | + | chr2_2:63486516-63486535 | Msa0263780:CDS | 40.0% | |
| GAGTAAAGTCACTATTGGTC+AGG | + | chr2_2:63486569-63486588 | Msa0263780:CDS | 40.0% | |
| TAAAGTCACTATTGGTCAGG+AGG | + | chr2_2:63486572-63486591 | Msa0263780:CDS | 40.0% | |
| !!! | TTCCATGCATTTTAGCTCCT+AGG | - | chr2_2:63486599-63486618 | None:intergenic | 40.0% |
| ! | AAGAGAACGTTTTCTCAGCT+TGG | - | chr2_2:63486748-63486767 | None:intergenic | 40.0% |
| !! | AGTATTTCGGCTTTGGGAAA+AGG | + | chr2_2:63486768-63486787 | Msa0263780:CDS | 40.0% |
| !! | TAAGGAGCACCAGAGATAAT+CGG | - | chr2_2:63486813-63486832 | None:intergenic | 40.0% |
| TTATCTCTGGTGCTCCTTAA+AGG | + | chr2_2:63486814-63486833 | Msa0263780:CDS | 40.0% | |
| TTCCACAAGCCAAAAGACAT+AGG | - | chr2_2:63486894-63486913 | None:intergenic | 40.0% | |
| AGAGACCTTACTATAGACAG+CGG | - | chr2_2:63486942-63486961 | None:intergenic | 40.0% | |
| TCACAGATTCCTTCCGTTCT+CGG | - | chr2_2:63484430-63484449 | None:intergenic | 45.0% | |
| ! | TCTGTGACAGTGCTTTTGTG+TGG | + | chr2_2:63484443-63484462 | Msa0263780:CDS | 45.0% |
| ! | GTGCTTTTGTGTGGAACTAG+TGG | + | chr2_2:63484452-63484471 | Msa0263780:CDS | 45.0% |
| TTGTGTGGAACTAGTGGTTG+TGG | + | chr2_2:63484458-63484477 | Msa0263780:CDS | 45.0% | |
| ATCCACATTGTCTGCATTGC+TGG | + | chr2_2:63484484-63484503 | Msa0263780:CDS | 45.0% | |
| TACCAGCAATGCAGACAATG+TGG | - | chr2_2:63484489-63484508 | None:intergenic | 45.0% | |
| GCAAAACTGGCCCTACATAT+TGG | - | chr2_2:63484552-63484571 | None:intergenic | 45.0% | |
| !! | GGCCAGTTTTGCTTAGTTTG+TGG | + | chr2_2:63484560-63484579 | Msa0263780:intron | 45.0% |
| TCCATTAGGCACATGATGAG+AGG | + | chr2_2:63484723-63484742 | Msa0263780:CDS | 45.0% | |
| ACCTCTCATCATGTGCCTAA+TGG | - | chr2_2:63484727-63484746 | None:intergenic | 45.0% | |
| TAGGTAGAGGCCCATAACAA+GGG | - | chr2_2:63484771-63484790 | None:intergenic | 45.0% | |
| TTTGCTTCTGCAACAGCAAC+AGG | - | chr2_2:63484816-63484835 | None:intergenic | 45.0% | |
| ! | TGTTGCTGTTGCAGAAGCAA+AGG | + | chr2_2:63484815-63484834 | Msa0263780:CDS | 45.0% |
| CCTTCAGTTGCTTCATCCTT+AGG | - | chr2_2:63484885-63484904 | None:intergenic | 45.0% | |
| CCTAAGGATGAAGCAACTGA+AGG | + | chr2_2:63484882-63484901 | Msa0263780:CDS | 45.0% | |
| ATTCAAGGCCCAGAGTGAAA+TGG | + | chr2_2:63484995-63485014 | Msa0263780:CDS | 45.0% | |
| TGGTGATTGACAGCCTAGAT+AGG | + | chr2_2:63485015-63485034 | Msa0263780:CDS | 45.0% | |
| ! | GAAAGAGTCCGTTGTTGTTG+AGG | + | chr2_2:63485061-63485080 | Msa0263780:CDS | 45.0% |
| GTGAACACCCTCAACAACAA+CGG | - | chr2_2:63485072-63485091 | None:intergenic | 45.0% | |
| ACGTGCAAAGTATATGACCC+TGG | + | chr2_2:63485300-63485319 | Msa0263780:CDS | 45.0% | |
| CCAGGATTATCTCTGTAAGC+GGG | + | chr2_2:63485372-63485391 | Msa0263780:CDS | 45.0% | |
| TCCAACGACAAGGTTCTTCA+AGG | + | chr2_2:63485605-63485624 | Msa0263780:CDS | 45.0% | |
| GGCTTGGCCTGTTAATTCAT+TGG | + | chr2_2:63485669-63485688 | Msa0263780:CDS | 45.0% | |
| ATTCGCAAGGGTCCATACAT+TGG | - | chr2_2:63485748-63485767 | None:intergenic | 45.0% | |
| ATGTATGGACCCTTGCGAAT+TGG | + | chr2_2:63485748-63485767 | Msa0263780:CDS | 45.0% | |
| TCTGCCTTTCCAATTCGCAA+GGG | - | chr2_2:63485760-63485779 | None:intergenic | 45.0% | |
| TTCTGCCTTTCCAATTCGCA+AGG | - | chr2_2:63485761-63485780 | None:intergenic | 45.0% | |
| AAAGCTGATGAGACTGACAC+AGG | + | chr2_2:63485868-63485887 | Msa0263780:CDS | 45.0% | |
| GAAGGTCCATTAGACATCCT+TGG | - | chr2_2:63485925-63485944 | None:intergenic | 45.0% | |
| ! | GTCTAATGGACCTTCAAAGG+AGG | + | chr2_2:63485930-63485949 | Msa0263780:CDS | 45.0% |
| AGGGGGGAAAATCAGATGAA+GGG | - | chr2_2:63486045-63486064 | None:intergenic | 45.0% | |
| AAGGGGGGAAAATCAGATGA+AGG | - | chr2_2:63486046-63486065 | None:intergenic | 45.0% | |
| CAGACGATGATGAAGAGTTC+AGG | + | chr2_2:63486547-63486566 | Msa0263780:CDS | 45.0% | |
| GACCTAGGAGCTAAAATGCA+TGG | + | chr2_2:63486594-63486613 | Msa0263780:CDS | 45.0% | |
| !! | TGGTTCTAAGGAAGAGATCC+AGG | - | chr2_2:63486638-63486657 | None:intergenic | 45.0% |
| GAATATGAGCAGAAGGACTC+TGG | - | chr2_2:63486675-63486694 | None:intergenic | 45.0% | |
| AAAAGGTAGTTCCACAGTCC+AGG | + | chr2_2:63486785-63486804 | Msa0263780:CDS | 45.0% | |
| TGGTGCTCCTTAAAGGTAGT+AGG | + | chr2_2:63486821-63486840 | Msa0263780:exon | 45.0% | |
| CGGGTATCCTACTACCTTTA+AGG | - | chr2_2:63486831-63486850 | None:intergenic | 45.0% | |
| CACAAGCCAAAAGACATAGG+AGG | - | chr2_2:63486891-63486910 | None:intergenic | 45.0% | |
| !!! | CTCCTATGTCTTTTGGCTTG+TGG | + | chr2_2:63486889-63486908 | Msa0263780:three_prime_UTR | 45.0% |
| GAGACCTTACTATAGACAGC+GGG | - | chr2_2:63486941-63486960 | None:intergenic | 45.0% | |
| TTTACTTCAGGGAAGTCGGC+TGG | + | chr2_2:63484674-63484693 | Msa0263780:intron | 50.0% | |
| TTACTTCAGGGAAGTCGGCT+GGG | + | chr2_2:63484675-63484694 | Msa0263780:intron | 50.0% | |
| AGGTAGAGGCCCATAACAAG+GGG | - | chr2_2:63484770-63484789 | None:intergenic | 50.0% | |
| GTAGGTAGAGGCCCATAACA+AGG | - | chr2_2:63484772-63484791 | None:intergenic | 50.0% | |
| AGGAGAGCGAAAAAGATGGC+TGG | + | chr2_2:63484843-63484862 | Msa0263780:CDS | 50.0% | |
| CATACATTGGAGGAGGGCTA+TGG | + | chr2_2:63484930-63484949 | Msa0263780:CDS | 50.0% | |
| CCCGCTTACAGAGATAATCC+TGG | - | chr2_2:63485375-63485394 | None:intergenic | 50.0% | |
| CCTACGTAGACAGCTGAACA+CGG | - | chr2_2:63485467-63485486 | None:intergenic | 50.0% | |
| TGTCTACGTAGGCGTGAAGT+TGG | + | chr2_2:63485475-63485494 | Msa0263780:CDS | 50.0% | |
| GTCTACGTAGGCGTGAAGTT+GGG | + | chr2_2:63485476-63485495 | Msa0263780:CDS | 50.0% | |
| TCTACGTAGGCGTGAAGTTG+GGG | + | chr2_2:63485477-63485496 | Msa0263780:CDS | 50.0% | |
| GCCTTGAAGAACCTTGTCGT+TGG | - | chr2_2:63485609-63485628 | None:intergenic | 50.0% | |
| ! | TACTGATGGGTCTGTGGCAA+AGG | + | chr2_2:63485648-63485667 | Msa0263780:CDS | 50.0% |
| ! | ACTGTAACGGGAAGCCTGTT+TGG | + | chr2_2:63485692-63485711 | Msa0263780:CDS | 50.0% |
| ! | CTGTAACGGGAAGCCTGTTT+GGG | + | chr2_2:63485693-63485712 | Msa0263780:CDS | 50.0% |
| ! | TGTAACGGGAAGCCTGTTTG+GGG | + | chr2_2:63485694-63485713 | Msa0263780:CDS | 50.0% |
| TGGACCCTTGCGAATTGGAA+AGG | + | chr2_2:63485753-63485772 | Msa0263780:CDS | 50.0% | |
| ACCCATCAACACTTCCAGCA+CGG | - | chr2_2:63485846-63485865 | None:intergenic | 50.0% | |
| CATCCTTGGTGAACTACAGC+AGG | - | chr2_2:63485911-63485930 | None:intergenic | 50.0% | |
| GCAAGCATAGGCAACCCAAA+TGG | - | chr2_2:63486269-63486288 | None:intergenic | 50.0% | |
| TGGGTTGCCTATGCTTGCAA+AGG | + | chr2_2:63486271-63486290 | Msa0263780:intron | 50.0% | |
| ACTATTGGTCAGGAGGACCT+AGG | + | chr2_2:63486579-63486598 | Msa0263780:CDS | 50.0% | |
| !! | CTGGCTCACTTCTGGTTCTA+AGG | - | chr2_2:63486650-63486669 | None:intergenic | 50.0% |
| GATAATCGGATCCTGGACTG+TGG | - | chr2_2:63486799-63486818 | None:intergenic | 50.0% | |
| GTCCAGGATCCGATTATCTC+TGG | + | chr2_2:63486801-63486820 | Msa0263780:CDS | 50.0% | |
| CACCAGAGATAATCGGATCC+TGG | - | chr2_2:63486806-63486825 | None:intergenic | 50.0% | |
| TCGACCCGCTGTCTATAGTA+AGG | + | chr2_2:63486934-63486953 | Msa0263780:three_prime_UTR | 50.0% | |
| GCTGAACACGGTAGCATGGA+TGG | - | chr2_2:63485455-63485474 | None:intergenic | 55.0% | |
| GACAGCTGAACACGGTAGCA+TGG | - | chr2_2:63485459-63485478 | None:intergenic | 55.0% | |
| CCGTGTTCAGCTGTCTACGT+AGG | + | chr2_2:63485464-63485483 | Msa0263780:CDS | 55.0% | |
| ATGGGTCTGTGGCAAAGGCT+TGG | + | chr2_2:63485653-63485672 | Msa0263780:CDS | 55.0% | |
| TCTTGTCCGTTGCCCCAAAC+AGG | - | chr2_2:63485709-63485728 | None:intergenic | 55.0% | |
| ATCAGTGCTTGGCCCTGTGA+TGG | + | chr2_2:63485811-63485830 | Msa0263780:CDS | 55.0% | |
| CGGCTTGTACCACCATCACA+GGG | - | chr2_2:63485826-63485845 | None:intergenic | 55.0% | |
| ACGGCTTGTACCACCATCAC+AGG | - | chr2_2:63485827-63485846 | None:intergenic | 55.0% | |
| !! | AGCCGTGCTGGAAGTGTTGA+TGG | + | chr2_2:63485841-63485860 | Msa0263780:CDS | 55.0% |
| !! | GCCGTGCTGGAAGTGTTGAT+GGG | + | chr2_2:63485842-63485861 | Msa0263780:CDS | 55.0% |
| CCTTGGTGAACTACAGCAGG+AGG | - | chr2_2:63485908-63485927 | None:intergenic | 55.0% | |
| CCTCCTGCTGTAGTTCACCA+AGG | + | chr2_2:63485905-63485924 | Msa0263780:CDS | 55.0% | |
| GCAGGTAGGTTCAGTTGACG+AGG | + | chr2_2:63486455-63486474 | Msa0263780:intron | 55.0% | |
| !! | CTCTGGTACTGGCTCACTTC+TGG | - | chr2_2:63486658-63486677 | None:intergenic | 55.0% |
| GAGCAGAAGGACTCTGGTAC+TGG | - | chr2_2:63486669-63486688 | None:intergenic | 55.0% | |
| TGAAAGGCGACTGCCACCAT+CGG | + | chr2_2:63486716-63486735 | Msa0263780:CDS | 55.0% | |
| !! | AGCTTGGCTTTTCCCGATGG+TGG | - | chr2_2:63486732-63486751 | None:intergenic | 55.0% |
| !! | CTCAGCTTGGCTTTTCCCGA+TGG | - | chr2_2:63486735-63486754 | None:intergenic | 55.0% |
| TGGGCCTCTACCTACCATGC+AGG | + | chr2_2:63484777-63484796 | Msa0263780:CDS | 60.0% | |
| CTCGCCTGCATGGTAGGTAG+AGG | - | chr2_2:63484784-63484803 | None:intergenic | 60.0% | |
| CAAGCACTCGCCTGCATGGT+AGG | - | chr2_2:63484790-63484809 | None:intergenic | 60.0% | |
| CTACCATGCAGGCGAGTGCT+TGG | + | chr2_2:63484788-63484807 | Msa0263780:CDS | 60.0% | |
| GATCCAAGCACTCGCCTGCA+TGG | - | chr2_2:63484794-63484813 | None:intergenic | 60.0% | |
| AGGGCTATGGTGCGCCTGAA+CGG | + | chr2_2:63484943-63484962 | Msa0263780:CDS | 60.0% | |
| ! | GGGAAGCCTGTTTGGGGCAA+CGG | + | chr2_2:63485700-63485719 | Msa0263780:CDS | 60.0% |
| AGTGCTTGGCCCTGTGATGG+TGG | + | chr2_2:63485814-63485833 | Msa0263780:CDS | 60.0% | |
| ! | GATGGTGGTACAAGCCGTGC+TGG | + | chr2_2:63485829-63485848 | Msa0263780:CDS | 60.0% |
| GAAAGGCGACTGCCACCATC+GGG | + | chr2_2:63486717-63486736 | Msa0263780:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 63484425 | 63487183 | 63484425 | ID=Msa0263780;Name=Msa0263780 |
| chr2_2 | mRNA | 63484425 | 63487183 | 63484425 | ID=Msa0263780-mRNA-1;Parent=Msa0263780;Name=Msa0263780-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.75|0.6|1|1|0.8|5|350|577 |
| chr2_2 | exon | 63484425 | 63484505 | 63484425 | ID=Msa0263780-mRNA-1:exon:19668;Parent=Msa0263780-mRNA-1 |
| chr2_2 | exon | 63484684 | 63485109 | 63484684 | ID=Msa0263780-mRNA-1:exon:19669;Parent=Msa0263780-mRNA-1 |
| chr2_2 | exon | 63485214 | 63485951 | 63485214 | ID=Msa0263780-mRNA-1:exon:19670;Parent=Msa0263780-mRNA-1 |
| chr2_2 | exon | 63486083 | 63486196 | 63486083 | ID=Msa0263780-mRNA-1:exon:19671;Parent=Msa0263780-mRNA-1 |
| chr2_2 | exon | 63486459 | 63487183 | 63486459 | ID=Msa0263780-mRNA-1:exon:19672;Parent=Msa0263780-mRNA-1 |
| chr2_2 | CDS | 63484425 | 63484505 | 63484425 | ID=Msa0263780-mRNA-1:cds;Parent=Msa0263780-mRNA-1 |
| chr2_2 | CDS | 63484684 | 63485109 | 63484684 | ID=Msa0263780-mRNA-1:cds;Parent=Msa0263780-mRNA-1 |
| chr2_2 | CDS | 63485214 | 63485951 | 63485214 | ID=Msa0263780-mRNA-1:cds;Parent=Msa0263780-mRNA-1 |
| chr2_2 | CDS | 63486083 | 63486196 | 63486083 | ID=Msa0263780-mRNA-1:cds;Parent=Msa0263780-mRNA-1 |
| chr2_2 | CDS | 63486459 | 63486833 | 63486459 | ID=Msa0263780-mRNA-1:cds;Parent=Msa0263780-mRNA-1 |
| chr2_2 | three_prime_UTR | 63486834 | 63487183 | 63486834 | ID=Msa0263780-mRNA-1:three_prime_utr;Parent=Msa0263780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
