Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327870 | XP_013445755.1 | 88.000 | 600 | 16 | 4 | 1 | 544 | 1 | 600 | 0.0 | 1039 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327870 | sp|O80605|SUC3_ARATH | 61.175 | 613 | 145 | 10 | 5 | 544 | 2 | 594 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327870 | J7FDE7 | 88.000 | 600 | 16 | 4 | 1 | 544 | 1 | 600 | 0.0 | 1039 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010910 | Msa1327870 | 0.816597 | 5.095668e-52 | -8.615850e-47 |
| Msa0047640 | Msa1327870 | 0.813666 | 2.280587e-51 | -8.615850e-47 |
| Msa0077340 | Msa1327870 | 0.807378 | 5.205320e-50 | -8.615850e-47 |
| Msa0106620 | Msa1327870 | 0.806125 | 9.572369e-50 | -8.615850e-47 |
| Msa0608270 | Msa1327870 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0626270 | Msa1327870 | 0.807614 | 4.637664e-50 | -8.615850e-47 |
| Msa0626460 | Msa1327870 | 0.825670 | 4.130746e-54 | -8.615850e-47 |
| Msa0648830 | Msa1327870 | 0.811492 | 6.814217e-51 | -8.615850e-47 |
| Msa0664540 | Msa1327870 | 0.815712 | 8.030957e-52 | -8.615850e-47 |
| Msa0693340 | Msa1327870 | -0.833049 | 6.666423e-56 | -8.615850e-47 |
| Msa0702720 | Msa1327870 | 0.831466 | 1.643186e-55 | -8.615850e-47 |
| Msa0703800 | Msa1327870 | 0.802427 | 5.638839e-49 | -8.615850e-47 |
| Msa0124910 | Msa1327870 | 0.802078 | 6.655349e-49 | -8.615850e-47 |
| Msa0142430 | Msa1327870 | 0.820388 | 7.041038e-53 | -8.615850e-47 |
| Msa0202490 | Msa1327870 | 0.823941 | 1.056366e-53 | -8.615850e-47 |
| Msa0209140 | Msa1327870 | 0.837516 | 4.964965e-57 | -8.615850e-47 |
| Msa0216340 | Msa1327870 | 0.825566 | 4.370764e-54 | -8.615850e-47 |
| Msa0220990 | Msa1327870 | 0.821735 | 3.447048e-53 | -8.615850e-47 |
| Msa1259730 | Msa1327870 | 0.917086 | 8.141805e-86 | -8.615850e-47 |
| Msa1292020 | Msa1327870 | 0.815085 | 1.107332e-51 | -8.615850e-47 |
| Msa1298100 | Msa1327870 | 0.811052 | 8.487645e-51 | -8.615850e-47 |
| Msa1327870 | Msa1331300 | 0.842785 | 2.092203e-58 | -8.615850e-47 |
| Msa1327870 | Msa1340200 | 0.808131 | 3.601103e-50 | -8.615850e-47 |
| Msa1327870 | Msa1341840 | 0.820059 | 8.378076e-53 | -8.615850e-47 |
| Msa1327870 | Msa1368390 | 0.811740 | 6.018264e-51 | -8.615850e-47 |
| Msa1327870 | Msa1373170 | 0.811155 | 8.066304e-51 | -8.615850e-47 |
| Msa1327870 | Msa1389900 | 0.846132 | 2.631680e-59 | -8.615850e-47 |
| Msa1327870 | Msa1391500 | 0.827345 | 1.647205e-54 | -8.615850e-47 |
| Msa1327870 | Msa1398810 | 0.809264 | 2.062326e-50 | -8.615850e-47 |
| Msa1327870 | Msa1429580 | 0.804230 | 2.386784e-49 | -8.615850e-47 |
| Msa1327870 | Msa1433870 | 0.826931 | 2.068563e-54 | -8.615850e-47 |
| Msa1327870 | Msa1461370 | 0.803148 | 4.002632e-49 | -8.615850e-47 |
| Msa1327870 | Msa1464090 | 0.810738 | 9.928786e-51 | -8.615850e-47 |
| Msa1327870 | Msa1464880 | 0.803666 | 3.126726e-49 | -8.615850e-47 |
| Msa0408380 | Msa1327870 | 0.804237 | 2.378435e-49 | -8.615850e-47 |
| Msa1012800 | Msa1327870 | 0.810545 | 1.092982e-50 | -8.615850e-47 |
| Msa1031390 | Msa1327870 | 0.806404 | 8.363415e-50 | -8.615850e-47 |
| Msa1074900 | Msa1327870 | 0.834438 | 2.997601e-56 | -8.615850e-47 |
| Msa1078830 | Msa1327870 | 0.814487 | 1.502628e-51 | -8.615850e-47 |
| Msa1078890 | Msa1327870 | 0.805518 | 1.284028e-49 | -8.615850e-47 |
| Msa1089960 | Msa1327870 | 0.810966 | 8.863664e-51 | -8.615850e-47 |
| Msa0245580 | Msa1327870 | 0.811622 | 6.385889e-51 | -8.615850e-47 |
| Msa0258040 | Msa1327870 | 0.817914 | 2.575380e-52 | -8.615850e-47 |
| Msa0263780 | Msa1327870 | 0.809671 | 1.686131e-50 | -8.615850e-47 |
| Msa0281470 | Msa1327870 | 0.803104 | 4.087564e-49 | -8.615850e-47 |
| Msa0284180 | Msa1327870 | 0.823315 | 1.480221e-53 | -8.615850e-47 |
| Msa0288620 | Msa1327870 | 0.814700 | 1.348038e-51 | -8.615850e-47 |
| Msa0300280 | Msa1327870 | 0.834936 | 2.246734e-56 | -8.615850e-47 |
| Msa0301520 | Msa1327870 | 0.811026 | 8.600385e-51 | -8.615850e-47 |
| Msa0304570 | Msa1327870 | 0.822612 | 2.158407e-53 | -8.615850e-47 |
| Msa0304680 | Msa1327870 | 0.801544 | 8.566306e-49 | -8.615850e-47 |
| Msa0322900 | Msa1327870 | 0.802788 | 4.751085e-49 | -8.615850e-47 |
| Msa0326710 | Msa1327870 | 0.821595 | 3.714076e-53 | -8.615850e-47 |
| Msa0339020 | Msa1327870 | 0.825759 | 3.933860e-54 | -8.615850e-47 |
| Msa1165090 | Msa1327870 | 0.848152 | 7.351358e-60 | -8.615850e-47 |
| Msa1169220 | Msa1327870 | 0.811906 | 5.537080e-51 | -8.615850e-47 |
| Msa1169660 | Msa1327870 | 0.827713 | 1.344156e-54 | -8.615850e-47 |
| Msa1192180 | Msa1327870 | 0.850676 | 1.455448e-60 | -8.615850e-47 |
| Msa1196430 | Msa1327870 | 0.879625 | 1.069668e-69 | -8.615850e-47 |
| Msa1207330 | Msa1327870 | 0.834409 | 3.047683e-56 | -8.615850e-47 |
| Msa0529670 | Msa1327870 | 0.821221 | 4.530031e-53 | -8.615850e-47 |
| Msa0534980 | Msa1327870 | 0.813967 | 1.957633e-51 | -8.615850e-47 |
| Msa0537760 | Msa1327870 | 0.804035 | 2.620686e-49 | -8.615850e-47 |
| Msa0544730 | Msa1327870 | 0.813192 | 2.898228e-51 | -8.615850e-47 |
| Msa0572750 | Msa1327870 | 0.837820 | 4.148538e-57 | -8.615850e-47 |
| Msa0959520 | Msa1327870 | 0.802761 | 4.811197e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327870 | MtrunA17_Chr8g0362191 | 88.000 | 600 | 16 | 4 | 1 | 544 | 1 | 600 | 0.0 | 1039 |
| Msa1327870 | MtrunA17_Chr3g0140911 | 38.919 | 555 | 210 | 11 | 40 | 531 | 7 | 495 | 4.67e-107 | 330 |
| Msa1327870 | MtrunA17_Chr1g0200811 | 36.833 | 562 | 239 | 13 | 44 | 542 | 17 | 525 | 6.03e-101 | 314 |
| Msa1327870 | MtrunA17_Chr6g0462451 | 37.192 | 527 | 197 | 13 | 54 | 509 | 10 | 473 | 2.97e-100 | 312 |
| Msa1327870 | MtrunA17_Chr4g0074681 | 37.066 | 518 | 194 | 12 | 51 | 509 | 27 | 471 | 5.74e-97 | 303 |
| Msa1327870 | MtrunA17_Chr5g0428261 | 43.590 | 234 | 97 | 6 | 54 | 258 | 28 | 255 | 6.04e-49 | 176 |
| Msa1327870 | MtrunA17_Chr5g0428261 | 43.902 | 205 | 81 | 4 | 334 | 509 | 273 | 472 | 8.15e-43 | 159 |
| Msa1327870 | MtrunA17_Chr6g0467341 | 39.914 | 233 | 107 | 5 | 55 | 259 | 26 | 253 | 1.51e-47 | 173 |
| Msa1327870 | MtrunA17_Chr6g0467341 | 36.179 | 246 | 113 | 5 | 334 | 542 | 270 | 508 | 8.12e-38 | 145 |
| Msa1327870 | MtrunA17_Chr4g0056841 | 40.206 | 97 | 53 | 2 | 357 | 452 | 196 | 288 | 3.08e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1327870 | AT2G02860.1 | 61.175 | 613 | 145 | 10 | 5 | 544 | 2 | 594 | 0.0 | 709 |
| Msa1327870 | AT2G02860.2 | 66.094 | 466 | 115 | 5 | 113 | 544 | 8 | 464 | 0.0 | 616 |
| Msa1327870 | AT1G09960.1 | 38.366 | 563 | 215 | 14 | 34 | 531 | 5 | 500 | 2.19e-103 | 320 |
| Msa1327870 | AT1G71890.1 | 37.240 | 529 | 212 | 13 | 61 | 531 | 31 | 497 | 4.59e-101 | 315 |
| Msa1327870 | AT1G22710.1 | 37.774 | 548 | 211 | 15 | 61 | 542 | 29 | 512 | 5.50e-101 | 314 |
| Msa1327870 | AT1G71880.1 | 36.976 | 549 | 221 | 13 | 42 | 531 | 16 | 498 | 2.77e-96 | 302 |
| Msa1327870 | AT5G06170.1 | 35.294 | 527 | 219 | 9 | 61 | 530 | 30 | 491 | 4.51e-95 | 298 |
| Msa1327870 | AT2G14670.1 | 36.604 | 530 | 209 | 11 | 61 | 530 | 30 | 492 | 1.76e-93 | 294 |
| Msa1327870 | AT1G66570.1 | 36.792 | 530 | 208 | 13 | 61 | 530 | 29 | 491 | 2.27e-92 | 291 |
| Msa1327870 | AT5G43610.1 | 35.091 | 550 | 215 | 13 | 43 | 530 | 23 | 492 | 7.50e-91 | 288 |
| Msa1327870 | AT1G66570.2 | 36.627 | 415 | 169 | 10 | 61 | 446 | 29 | 378 | 1.66e-76 | 248 |
| Msa1327870 | AT1G66570.3 | 36.627 | 415 | 169 | 10 | 61 | 446 | 29 | 378 | 1.09e-75 | 247 |
Find 171 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAATAACATGAAAATTT+TGG | 0.112276 | 8_4:-45581535 | Msa1327870:three_prime_UTR |
| TGGCTTTGTGGCCCCATTAC+AGG | 0.181088 | 8_4:-45588007 | Msa1327870:CDS |
| CAAACTTGTAGAACATTTAA+AGG | 0.194823 | 8_4:-45586846 | Msa1327870:intron |
| GCAGACATTGGATACATATT+AGG | 0.197342 | 8_4:-45586996 | Msa1327870:intron |
| ATCAGATTCTGCTCCTTTAT+TGG | 0.203282 | 8_4:-45583861 | Msa1327870:CDS |
| TTAACTTGTTGACAAGTTTA+AGG | 0.221760 | 8_4:-45583664 | Msa1327870:CDS |
| TTATATTTATTCTTGGGTTC+TGG | 0.225572 | 8_4:-45586803 | Msa1327870:CDS |
| GCTGCTGTTATATTTATTCT+TGG | 0.264086 | 8_4:-45586810 | Msa1327870:CDS |
| TGTACATGGTCCTCAGAAAT+TGG | 0.266186 | 8_4:-45581554 | Msa1327870:three_prime_UTR |
| GGTCCATGGGATGCTCTCTT+TGG | 0.288809 | 8_4:-45581736 | Msa1327870:CDS |
| ACTTCCAAAGTGGTCCCTTT+TGG | 0.289575 | 8_4:+45583364 | None:intergenic |
| TGTCTGAAAGCTAATCTTAG+AGG | 0.296854 | 8_4:-45581137 | Msa1327870:three_prime_UTR |
| GACTCATTTATAACAGATAA+AGG | 0.302396 | 8_4:+45583803 | None:intergenic |
| AGATCATAATGAAAATTTAA+TGG | 0.305128 | 8_4:-45583708 | Msa1327870:CDS |
| CCTTTATTGGATGAACAAAA+TGG | 0.305588 | 8_4:-45583848 | Msa1327870:CDS |
| TCATTTCTTAGATTCTTATA+AGG | 0.308826 | 8_4:+45588733 | None:intergenic |
| ATGATTATATCCCTTGGTTC+TGG | 0.309802 | 8_4:-45581757 | Msa1327870:CDS |
| TCTTCATTTATTTGGCTTTG+TGG | 0.317021 | 8_4:-45588019 | Msa1327870:CDS |
| CAGACATTGGATACATATTA+GGG | 0.317808 | 8_4:-45586995 | Msa1327870:CDS |
| CATTCTTCCTCCCACATTGC+GGG | 0.318982 | 8_4:-45581441 | Msa1327870:three_prime_UTR |
| GAACTTCATCAGCAAAATAT+AGG | 0.324119 | 8_4:+45583915 | None:intergenic |
| CAATATTCCAGCATTTGTTT+TGG | 0.325019 | 8_4:-45581707 | Msa1327870:CDS |
| TGCCGACGAGTTCGACTTCC+GGG | 0.326876 | 8_4:+45588701 | None:intergenic |
| GGGGCCAGCTAGAGCACTTT+TGG | 0.330003 | 8_4:-45586641 | Msa1327870:CDS |
| GTCGTCTTTGTTTGCATGGC+TGG | 0.331375 | 8_4:-45583059 | Msa1327870:CDS |
| CTGCTGTTATATTTATTCTT+GGG | 0.335722 | 8_4:-45586809 | Msa1327870:CDS |
| CTGCTGGTGTTCAGTTTGGT+TGG | 0.338510 | 8_4:-45588558 | Msa1327870:CDS |
| GGGATACAAAAGAGCATTGC+AGG | 0.341769 | 8_4:-45586974 | Msa1327870:intron |
| TGAAGAAGGTCAAAGAATTT+AGG | 0.341832 | 8_4:+45588907 | None:intergenic |
| TGATGGGTGCAAGATTAGTA+TGG | 0.342077 | 8_4:-45583097 | Msa1327870:CDS |
| GTAATGGTTGAAGAATTTCT+AGG | 0.347978 | 8_4:+45588845 | None:intergenic |
| TGCTGGTGTTCAGTTTGGTT+GGG | 0.348774 | 8_4:-45588557 | Msa1327870:CDS |
| ATGGCAGTGGGCAACATTCT+AGG | 0.352234 | 8_4:-45586228 | Msa1327870:CDS |
| TATCCCTTGGTTCTGGTCCA+TGG | 0.360221 | 8_4:-45581750 | Msa1327870:CDS |
| TCTTCTCACACCTTACATTC+AGG | 0.361681 | 8_4:-45588521 | Msa1327870:intron |
| GCAGAGTTGACTGCTGATTC+AGG | 0.375792 | 8_4:-45582712 | Msa1327870:CDS |
| ACTCAACATGTGCTCCATTC+AGG | 0.385210 | 8_4:+45581196 | None:intergenic |
| TGATGCAGACATTGGGAATA+GGG | 0.392489 | 8_4:-45588051 | Msa1327870:intron |
| TCTAGCAGTTTCAAGTCATC+AGG | 0.393476 | 8_4:-45581628 | Msa1327870:CDS |
| CCTACCACAAGGCCTGTAAT+GGG | 0.394686 | 8_4:+45587995 | None:intergenic |
| TTGATGCAGACATTGGGAAT+AGG | 0.402286 | 8_4:-45588052 | Msa1327870:intron |
| GGTGTTAGAGAAGGTGCATT+TGG | 0.403690 | 8_4:-45583325 | Msa1327870:CDS |
| TTTGATACATTGCGTTGATC+AGG | 0.404726 | 8_4:+45586270 | None:intergenic |
| ATATAACAGCAGCCCTTGTT+CGG | 0.409438 | 8_4:+45586820 | None:intergenic |
| CAAGCTCTATTTGTCAAGAA+AGG | 0.411741 | 8_4:+45584853 | None:intergenic |
| ATGCCGACGAGTTCGACTTC+CGG | 0.413282 | 8_4:+45588700 | None:intergenic |
| ATCCCTTGGTTCTGGTCCAT+GGG | 0.418535 | 8_4:-45581749 | Msa1327870:CDS |
| ACTTACCTGCACTGTGTTGT+TGG | 0.425888 | 8_4:+45586767 | None:intergenic |
| ATGACTTGAAACTGCTAGAA+AGG | 0.429364 | 8_4:+45581632 | None:intergenic |
| AAGGAGCAGAATCTGATAAC+TGG | 0.429671 | 8_4:+45583867 | None:intergenic |
| TTTCATTTCGGCTAGCTGTT+GGG | 0.440022 | 8_4:-45581604 | Msa1327870:exon |
| AAACTTGTAGAACATTTAAA+GGG | 0.440376 | 8_4:-45586845 | Msa1327870:intron |
| TCTTGCAATTGTTGCTCCAC+AGG | 0.442753 | 8_4:-45582574 | Msa1327870:intron |
| CGAACCAATGTGTAAGTTGA+TGG | 0.442939 | 8_4:-45583114 | Msa1327870:CDS |
| ACCTACCACAAGGCCTGTAA+TGG | 0.450617 | 8_4:+45587994 | None:intergenic |
| GTTGCTGCTGGTGTTCAGTT+TGG | 0.451684 | 8_4:-45588562 | Msa1327870:CDS |
| AACTTCATCAGCAAAATATA+GGG | 0.451842 | 8_4:+45583916 | None:intergenic |
| TTGAAACTGCTAGAAAGGTT+TGG | 0.454502 | 8_4:+45581637 | None:intergenic |
| TATAACAGCAGCCCTTGTTC+GGG | 0.457428 | 8_4:+45586821 | None:intergenic |
| GAAGTAGATCTTTATGATCA+AGG | 0.457898 | 8_4:-45583346 | Msa1327870:CDS |
| TTGTATGTAATATATTATAA+TGG | 0.458325 | 8_4:-45581410 | Msa1327870:three_prime_UTR |
| CTTAGTTGTACCGTTGCTGC+TGG | 0.458570 | 8_4:-45588574 | Msa1327870:CDS |
| TGAGGCATGTGGCAATCTTA+AGG | 0.459644 | 8_4:-45584827 | Msa1327870:CDS |
| GCATTCAGTGCTGGTTGTAA+TGG | 0.460583 | 8_4:-45583624 | Msa1327870:CDS |
| GTTGCTTTCCATTACACAAA+AGG | 0.462252 | 8_4:-45581487 | Msa1327870:three_prime_UTR |
| ACCTGCTATGCATTCAGTGC+TGG | 0.463939 | 8_4:-45583633 | Msa1327870:CDS |
| GATAGTTAATCTTGCGACTT+GGG | 0.465755 | 8_4:-45581289 | Msa1327870:three_prime_UTR |
| TGGTTGTAATGGCTCTCACT+TGG | 0.466348 | 8_4:-45583613 | Msa1327870:CDS |
| CCATGGGATGCTCTCTTTGG+TGG | 0.467830 | 8_4:-45581733 | Msa1327870:CDS |
| CGAGGGATAGAACATGCAAT+TGG | 0.469372 | 8_4:-45582996 | Msa1327870:CDS |
| GTTTATCATGGGGATCCAAA+AGG | 0.474324 | 8_4:-45583379 | Msa1327870:CDS |
| ATTTAGATGATTATATCCCT+TGG | 0.481464 | 8_4:-45581763 | Msa1327870:intron |
| CTGTCTACCTGCAGTTGTCA+TGG | 0.481867 | 8_4:-45583444 | Msa1327870:intron |
| CGTGTTAGGACCTGAATGTA+AGG | 0.483547 | 8_4:+45588511 | None:intergenic |
| GTCGAACTCGTCGGCATCGA+CGG | 0.484624 | 8_4:-45588694 | Msa1327870:CDS |
| TTTGTTCGATACGGATTGGA+TGG | 0.485266 | 8_4:-45583410 | Msa1327870:CDS |
| ATGGGAAGAGAAGTTTATCA+TGG | 0.487612 | 8_4:-45583391 | Msa1327870:CDS |
| CATAATGAAAATTTAATGGA+TGG | 0.488610 | 8_4:-45583704 | Msa1327870:CDS |
| TTCACAACACGTCGTCGTAA+TGG | 0.489694 | 8_4:-45588788 | Msa1327870:exon |
| GGATGGGCCTGGAGCAGTAT+TGG | 0.491457 | 8_4:-45583687 | Msa1327870:CDS |
| ATGGCTTTATAGGTTGTGCT+TGG | 0.491540 | 8_4:-45583155 | Msa1327870:intron |
| AGAGATCCTGCTAGAATGAA+TGG | 0.494658 | 8_4:+45587140 | None:intergenic |
| AGCATGAGAGTTTCAATGCT+GGG | 0.498161 | 8_4:-45583733 | Msa1327870:CDS |
| AAGCTCTATTTGTCAAGAAA+GGG | 0.498756 | 8_4:+45584854 | None:intergenic |
| GCGTCCATCTGTGCTCTAGC+CGG | 0.500700 | 8_4:-45581685 | Msa1327870:CDS |
| TGATAGTTAATCTTGCGACT+TGG | 0.504670 | 8_4:-45581290 | Msa1327870:three_prime_UTR |
| TAATGGTTGAAGAATTTCTA+GGG | 0.507862 | 8_4:+45588846 | None:intergenic |
| GCTGATTCAGGTGGTGGCCA+AGG | 0.516252 | 8_4:-45582700 | Msa1327870:intron |
| GGCAGCATTTCTTGTTGCTG+TGG | 0.519356 | 8_4:-45584806 | Msa1327870:intron |
| CCTGCACTGTGTTGTTGGCA+AGG | 0.520122 | 8_4:+45586772 | None:intergenic |
| TGGGATGCTCTCTTTGGTGG+TGG | 0.522974 | 8_4:-45581730 | Msa1327870:CDS |
| CTATCCCTCGAGTATAATCA+TGG | 0.523520 | 8_4:+45583009 | None:intergenic |
| GAAAATTTAATGGATGGGCC+TGG | 0.525286 | 8_4:-45583698 | Msa1327870:CDS |
| CATTTAAAGGGACCCGAACA+AGG | 0.526346 | 8_4:-45586833 | Msa1327870:CDS |
| ATGGACGCCAAAACAAATGC+TGG | 0.527268 | 8_4:+45581700 | None:intergenic |
| CAACACGTCGTCGTAATGGC+GGG | 0.529777 | 8_4:-45588784 | Msa1327870:exon |
| ATCCTCGCTTAACTTACCAT+TGG | 0.532882 | 8_4:+45583781 | None:intergenic |
| TCTGCCAAAAGTGCTCTAGC+TGG | 0.536289 | 8_4:+45586637 | None:intergenic |
| TTGTTCGATACGGATTGGAT+GGG | 0.538564 | 8_4:-45583409 | Msa1327870:CDS |
| TAGAGTTGCAACAATGCCAC+CGG | 0.540131 | 8_4:+45581666 | None:intergenic |
| GAATGGAATCGTGGAAAAGA+AGG | 0.541571 | 8_4:+45588880 | None:intergenic |
| CCATACATGATATACATACA+TGG | 0.543709 | 8_4:+45581108 | None:intergenic |
| AAGTTAACCAATACTGCTCC+AGG | 0.544867 | 8_4:+45583680 | None:intergenic |
| ACGGCGATGAACCTCGGCAC+CGG | 0.545637 | 8_4:-45588669 | Msa1327870:CDS |
| AGACGTCCATTCATTCTAGC+AGG | 0.545928 | 8_4:-45587146 | Msa1327870:CDS |
| CGTCTGGTGCTAGTGGAAAG+TGG | 0.547536 | 8_4:-45586200 | Msa1327870:CDS |
| AACATTCTAGGATATTCGTC+TGG | 0.547818 | 8_4:-45586216 | Msa1327870:CDS |
| TTTATCATGGGGATCCAAAA+GGG | 0.547987 | 8_4:-45583378 | Msa1327870:CDS |
| ATAATGAAAATTTAATGGAT+GGG | 0.551396 | 8_4:-45583703 | Msa1327870:CDS |
| TGGGAAGAGAAGTTTATCAT+GGG | 0.553628 | 8_4:-45583390 | Msa1327870:CDS |
| GAAAAGAAGGAAAATGAAGA+AGG | 0.553644 | 8_4:+45588893 | None:intergenic |
| AAGCATGAGAGTTTCAATGC+TGG | 0.555243 | 8_4:-45583734 | Msa1327870:CDS |
| GGATATTCGTCTGGTGCTAG+TGG | 0.556399 | 8_4:-45586207 | Msa1327870:CDS |
| TCATGTTATTCCAATTTCTG+AGG | 0.560978 | 8_4:+45581544 | None:intergenic |
| GGTTGTAATGGCTCTCACTT+GGG | 0.562605 | 8_4:-45583612 | Msa1327870:intron |
| TCTGTCCATGATTATACTCG+AGG | 0.565758 | 8_4:-45583014 | Msa1327870:CDS |
| GGATCCAAAAGGGACCACTT+TGG | 0.567204 | 8_4:-45583368 | Msa1327870:CDS |
| TCATTCTTCCTCCCACATTG+CGG | 0.568161 | 8_4:-45581442 | Msa1327870:three_prime_UTR |
| ACGGCGACGGCGATGAACCT+CGG | 0.571254 | 8_4:-45588675 | Msa1327870:CDS |
| ACCAGCACTGAATGCATAGC+AGG | 0.572610 | 8_4:+45583632 | None:intergenic |
| AAGAAATGATTCTTCCGCCC+CGG | 0.572649 | 8_4:-45588719 | Msa1327870:CDS |
| AACGAAGCATTATTCTTCGT+CGG | 0.574701 | 8_4:+45588610 | None:intergenic |
| TTGACTGCTGATTCAGGTGG+TGG | 0.581081 | 8_4:-45582706 | Msa1327870:CDS |
| CAAAGAATTTAGGCGGGTGA+AGG | 0.582665 | 8_4:+45588917 | None:intergenic |
| TATGATCAAGGTGTTAGAGA+AGG | 0.584148 | 8_4:-45583334 | Msa1327870:CDS |
| GCACCCATCAACTTACACAT+TGG | 0.584425 | 8_4:+45583110 | None:intergenic |
| TCTGTTATAAATGAGTCCAA+TGG | 0.584815 | 8_4:-45583797 | Msa1327870:CDS |
| TAGGCGGGTGAAGGAAGCTA+TGG | 0.588518 | 8_4:+45588926 | None:intergenic |
| TGGCCCCATTACAGGCCTTG+TGG | 0.591978 | 8_4:-45587999 | Msa1327870:intron |
| GATGGGTGCAAGATTAGTAT+GGG | 0.593697 | 8_4:-45583096 | Msa1327870:CDS |
| CTGTCCATGATTATACTCGA+GGG | 0.596081 | 8_4:-45583013 | Msa1327870:CDS |
| CTCGTCGGCATCGACGGCGA+CGG | 0.596347 | 8_4:-45588688 | Msa1327870:CDS |
| TGTTTACTTGCAGTAGTAAG+CGG | 0.596694 | 8_4:+45583893 | None:intergenic |
| TTAAGATCGATCCGGTGCCG+AGG | 0.602361 | 8_4:+45588658 | None:intergenic |
| AATACAGACACCCGCAATGT+GGG | 0.605254 | 8_4:+45581431 | None:intergenic |
| ATAAAGATCTACTTCCAAAG+TGG | 0.605985 | 8_4:+45583354 | None:intergenic |
| TCCATCTGTGCTCTAGCCGG+TGG | 0.612635 | 8_4:-45581682 | Msa1327870:CDS |
| AAACTGAACACCAGCAGCAA+CGG | 0.612679 | 8_4:+45588564 | None:intergenic |
| ATCCCATGGACCAGAACCAA+GGG | 0.616521 | 8_4:+45581747 | None:intergenic |
| CCTTGCCAACAACACAGTGC+AGG | 0.617565 | 8_4:-45586772 | Msa1327870:intron |
| TTGAAATGGGAATGGAATCG+TGG | 0.625465 | 8_4:+45588871 | None:intergenic |
| CATCCCATGGACCAGAACCA+AGG | 0.629070 | 8_4:+45581746 | None:intergenic |
| CCACCAAAGAGAGCATCCCA+TGG | 0.630045 | 8_4:+45581733 | None:intergenic |
| ACAACACGTCGTCGTAATGG+CGG | 0.631213 | 8_4:-45588785 | Msa1327870:exon |
| GAAGGTCAAAGAATTTAGGC+GGG | 0.633847 | 8_4:+45588911 | None:intergenic |
| GCCCCGGAAGTCGAACTCGT+CGG | 0.634440 | 8_4:-45588703 | Msa1327870:CDS |
| TGCACAATAGAAGAAAACTT+AGG | 0.635280 | 8_4:-45581386 | Msa1327870:three_prime_UTR |
| GCATGAGAGTTTCAATGCTG+GGG | 0.638752 | 8_4:-45583732 | Msa1327870:CDS |
| ACAGACACCCGCAATGTGGG+AGG | 0.642888 | 8_4:+45581434 | None:intergenic |
| TTAGATTCTTATAAGGAACA+CGG | 0.649952 | 8_4:+45588740 | None:intergenic |
| GAACCAATGTGTAAGTTGAT+GGG | 0.650882 | 8_4:-45583113 | Msa1327870:CDS |
| CAATACAGACACCCGCAATG+TGG | 0.651369 | 8_4:+45581430 | None:intergenic |
| GGGAAGAGAAGTTTATCATG+GGG | 0.653043 | 8_4:-45583389 | Msa1327870:CDS |
| GATCTTAATTCACCGCCGCG+TGG | 0.653872 | 8_4:-45588643 | Msa1327870:CDS |
| TGAAGGAAGCTATGGTGCCA+TGG | 0.654873 | 8_4:+45588934 | None:intergenic |
| GACGAGTTCGACTTCCGGGG+CGG | 0.656144 | 8_4:+45588705 | None:intergenic |
| GCGGTGAATTAAGATCGATC+CGG | 0.656534 | 8_4:+45588650 | None:intergenic |
| ATTTAAAGGGACCCGAACAA+GGG | 0.660883 | 8_4:-45586832 | Msa1327870:CDS |
| AGAAGGTCAAAGAATTTAGG+CGG | 0.663849 | 8_4:+45588910 | None:intergenic |
| GCCGACGAGTTCGACTTCCG+GGG | 0.666158 | 8_4:+45588702 | None:intergenic |
| CTACCACAAGGCCTGTAATG+GGG | 0.667284 | 8_4:+45587996 | None:intergenic |
| AGCACTGAATGCATAGCAGG+TGG | 0.671343 | 8_4:+45583635 | None:intergenic |
| GACAAATAGAGCTTGCTGTG+AGG | 0.676643 | 8_4:-45584845 | Msa1327870:CDS |
| GTCCAATGGTAAGTTAAGCG+AGG | 0.680050 | 8_4:-45583783 | Msa1327870:CDS |
| GTTAAGCGAGGATCGCTCTG+AGG | 0.695917 | 8_4:-45583771 | Msa1327870:CDS |
| AGAGCTTGCTGTGAGGCATG+TGG | 0.720128 | 8_4:-45584838 | Msa1327870:CDS |
| GCAGATCTGACTTTCAACCA+TGG | 0.727497 | 8_4:-45588951 | Msa1327870:five_prime_UTR |
| AGACATTGGATACATATTAG+GGG | 0.732708 | 8_4:-45586994 | Msa1327870:CDS |
| GAGTTGACTGCTGATTCAGG+TGG | 0.739601 | 8_4:-45582709 | Msa1327870:CDS |
| GGTAATTGATCTCCACGCGG+CGG | 0.740298 | 8_4:+45588631 | None:intergenic |
| GTCGGTAATTGATCTCCACG+CGG | 0.789717 | 8_4:+45588628 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTTTTATAGAAAC+CGG | - | chr8_4:45582452-45582471 | Msa1327870:intron | 10.0% |
| !! | TTTAAATTTAAACAAATGAA+AGG | + | chr8_4:45583406-45583425 | None:intergenic | 10.0% |
| !! | TTGTTTAAATTTAAATTTAG+GGG | - | chr8_4:45583411-45583430 | Msa1327870:CDS | 10.0% |
| !! | TTTAATTGAATATCTTATTA+TGG | - | chr8_4:45583976-45583995 | Msa1327870:intron | 10.0% |
| !! | GAAATAAATATTATAGTATT+AGG | - | chr8_4:45584832-45584851 | Msa1327870:CDS | 10.0% |
| !! | TACATATATAAATTCAATAA+TGG | + | chr8_4:45585102-45585121 | None:intergenic | 10.0% |
| !!! | TTTTTTTATTAATTCTATTG+TGG | - | chr8_4:45585735-45585754 | Msa1327870:intron | 10.0% |
| !!! | TTTTTTATTAATTCTATTGT+GGG | - | chr8_4:45585736-45585755 | Msa1327870:intron | 10.0% |
| !!! | TTTTATTAAATTCGATTTTT+TGG | - | chr8_4:45586869-45586888 | Msa1327870:intron | 10.0% |
| !! | TGTCTATATATATATATATA+TGG | - | chr8_4:45587267-45587286 | Msa1327870:intron | 10.0% |
| !!! | TATTTTATTTATTAGTTTGA+TGG | - | chr8_4:45587609-45587628 | Msa1327870:intron | 10.0% |
| !! | TTGTATGTAATATATTATAA+TGG | - | chr8_4:45588661-45588680 | Msa1327870:CDS | 10.0% |
| !! | TTGATCTTAAATGATATTAA+TGG | - | chr8_4:45582246-45582265 | Msa1327870:intron | 15.0% |
| !!! | ATTAAATTGTATTTTTGTAC+CGG | + | chr8_4:45582474-45582493 | None:intergenic | 15.0% |
| !!! | TAGAAATTTACTTTTATTGA+TGG | - | chr8_4:45582496-45582515 | Msa1327870:intron | 15.0% |
| !! | ATGGTAAAGTATATTTAAAA+AGG | - | chr8_4:45582515-45582534 | Msa1327870:intron | 15.0% |
| !!! | TAAATTAAGTCTTGTAATTT+AGG | - | chr8_4:45583032-45583051 | Msa1327870:CDS | 15.0% |
| !!! | AATTTGAAAATTTTGTTTAG+AGG | - | chr8_4:45584213-45584232 | Msa1327870:intron | 15.0% |
| !!! | TCGTTTTAGAAATTTTTTTT+TGG | + | chr8_4:45584239-45584258 | None:intergenic | 15.0% |
| !!! | AAAAAATTTCTAAAACGATA+TGG | - | chr8_4:45584241-45584260 | Msa1327870:intron | 15.0% |
| !! | AGAAAAACCAAAATATTAAT+CGG | + | chr8_4:45585180-45585199 | None:intergenic | 15.0% |
| !! | TCAAACATATTATTTATGAT+AGG | + | chr8_4:45585405-45585424 | None:intergenic | 15.0% |
| !!! | TTTTTATTAATTCTATTGTG+GGG | - | chr8_4:45585737-45585756 | Msa1327870:intron | 15.0% |
| !! | AGATCATAATGAAAATTTAA+TGG | - | chr8_4:45586363-45586382 | Msa1327870:intron | 15.0% |
| !!! | ATAATGAAAATTTAATGGAT+GGG | - | chr8_4:45586368-45586387 | Msa1327870:intron | 15.0% |
| !!! | TTTTCCTGAATAATTATTTA+TGG | - | chr8_4:45586897-45586916 | Msa1327870:intron | 15.0% |
| !!! | ATAATTATTTATGGCTTTAT+AGG | - | chr8_4:45586906-45586925 | Msa1327870:intron | 15.0% |
| !!! | ATTTTTTCTATTTATGTATG+TGG | - | chr8_4:45587829-45587848 | Msa1327870:intron | 15.0% |
| !! | TCATTTCTTAGATTCTTATA+AGG | + | chr8_4:45581341-45581360 | None:intergenic | 20.0% |
| !!! | AAAATGACTACTTTTCTTTT+TGG | + | chr8_4:45581734-45581753 | None:intergenic | 20.0% |
| !! | ATATTTAGAAACTATGATGA+TGG | - | chr8_4:45581917-45581936 | Msa1327870:intron | 20.0% |
| !! | ATGTAATTACTCTATTTGTT+TGG | - | chr8_4:45581994-45582013 | Msa1327870:intron | 20.0% |
| !!! | ATGCTTTTTCTTCATTTATT+TGG | - | chr8_4:45582044-45582063 | Msa1327870:intron | 20.0% |
| !! | CATATTTATACTTACTATTC+TGG | - | chr8_4:45582155-45582174 | Msa1327870:intron | 20.0% |
| !!! | TTTAAGCCTTCTATATTTTA+TGG | - | chr8_4:45582211-45582230 | Msa1327870:intron | 20.0% |
| !! | TTTCTTAGATTAGATTAGAT+AGG | + | chr8_4:45582652-45582671 | None:intergenic | 20.0% |
| !! | AGAATAAATAGAGAAATGAA+AGG | + | chr8_4:45582763-45582782 | None:intergenic | 20.0% |
| !!! | ATTTTAAACTGGTAAATTAC+AGG | - | chr8_4:45582849-45582868 | Msa1327870:intron | 20.0% |
| !! | GATAAATGTACTTCAAAATT+TGG | - | chr8_4:45582898-45582917 | Msa1327870:intron | 20.0% |
| !! | TAAATAAACTCGGATATTAA+TGG | - | chr8_4:45583185-45583204 | Msa1327870:intron | 20.0% |
| !! | AAACTTGTAGAACATTTAAA+GGG | - | chr8_4:45583226-45583245 | Msa1327870:intron | 20.0% |
| !! | TCAATTAAAAAACAGAGTAA+TGG | + | chr8_4:45583965-45583984 | None:intergenic | 20.0% |
| !! | ATCTTATTATGGACAAAATT+TGG | - | chr8_4:45583987-45584006 | Msa1327870:intron | 20.0% |
| !! | TCTTATTATGGACAAAATTT+GGG | - | chr8_4:45583988-45584007 | Msa1327870:intron | 20.0% |
| !! | ATATCCAATGTTTATGTATT+TGG | - | chr8_4:45584587-45584606 | Msa1327870:intron | 20.0% |
| !! | TATCCAATGTTTATGTATTT+GGG | - | chr8_4:45584588-45584607 | Msa1327870:intron | 20.0% |
| !!! | TGTATTACCGATTAATATTT+TGG | - | chr8_4:45585170-45585189 | Msa1327870:intron | 20.0% |
| !!! | TACTGAAAATCCTTTTATTT+GGG | - | chr8_4:45585296-45585315 | Msa1327870:intron | 20.0% |
| !! | TATGATAGGTGAAAAAAAAA+AGG | + | chr8_4:45585391-45585410 | None:intergenic | 20.0% |
| !!! | GTTTCTCTTATAATTTTTCT+AGG | + | chr8_4:45585534-45585553 | None:intergenic | 20.0% |
| !!! | AATTTTTACCTCTACATTAA+TGG | + | chr8_4:45585885-45585904 | None:intergenic | 20.0% |
| !! | ATTAATGTAGAGGTAAAAAT+TGG | - | chr8_4:45585884-45585903 | Msa1327870:intron | 20.0% |
| !! | CATAATGAAAATTTAATGGA+TGG | - | chr8_4:45586367-45586386 | Msa1327870:intron | 20.0% |
| !! | ACAATGTAAAAACAGAAAAT+AGG | + | chr8_4:45586537-45586556 | None:intergenic | 20.0% |
| !! | TACATTGTTAGTGAATTTAT+TGG | - | chr8_4:45586549-45586568 | Msa1327870:intron | 20.0% |
| !! | AAAGCCATAAATAATTATTC+AGG | + | chr8_4:45586904-45586923 | None:intergenic | 20.0% |
| !!! | AAAAGTATTTGAGAAGAAAA+TGG | + | chr8_4:45587525-45587544 | None:intergenic | 20.0% |
| !!! | AGATTATTTTGATTCAAGTA+AGG | - | chr8_4:45588187-45588206 | Msa1327870:intron | 20.0% |
| !!! | TTGGAATAACATGAAAATTT+TGG | - | chr8_4:45588536-45588555 | Msa1327870:CDS | 20.0% |
| !!! | AATTTCTAGGGTTTTGAAAT+GGG | + | chr8_4:45581216-45581235 | None:intergenic | 25.0% |
| ! | TAATGGTTGAAGAATTTCTA+GGG | + | chr8_4:45581228-45581247 | None:intergenic | 25.0% |
| !!! | ATCGAGTTTTTGAAATGTAA+TGG | + | chr8_4:45581245-45581264 | None:intergenic | 25.0% |
| ! | TTAGATTCTTATAAGGAACA+CGG | + | chr8_4:45581334-45581353 | None:intergenic | 25.0% |
| ! | TTAAGATAAACAAACGTGTT+AGG | + | chr8_4:45581577-45581596 | None:intergenic | 25.0% |
| ! | GTCATTATAGTAGTATCTAA+AGG | - | chr8_4:45581779-45581798 | Msa1327870:intron | 25.0% |
| ! | ACTAAGCCATAAAATATAGA+AGG | + | chr8_4:45582220-45582239 | None:intergenic | 25.0% |
| ! | ACAATTGATCATAACAATAG+TGG | + | chr8_4:45582278-45582297 | None:intergenic | 25.0% |
| !!! | AAATTTTCGTGAAGTATTGA+TGG | - | chr8_4:45582407-45582426 | Msa1327870:intron | 25.0% |
| ! | CTACTTATTATGACAGTTAT+GGG | + | chr8_4:45582822-45582841 | None:intergenic | 25.0% |
| ! | ACTACTTATTATGACAGTTA+TGG | + | chr8_4:45582823-45582842 | None:intergenic | 25.0% |
| !!! | GTAGTCTTACAATTTTAAAC+TGG | - | chr8_4:45582838-45582857 | Msa1327870:intron | 25.0% |
| ! | TAATCCGATGTAAAAAAGTA+TGG | + | chr8_4:45583003-45583022 | None:intergenic | 25.0% |
| ! | GTAATTTAGGTGATATTGAT+CGG | - | chr8_4:45583045-45583064 | Msa1327870:CDS | 25.0% |
| ! | TAATTTAGGTGATATTGATC+GGG | - | chr8_4:45583046-45583065 | Msa1327870:CDS | 25.0% |
| ! | GAGTTTCACTTAAATAAACT+CGG | - | chr8_4:45583175-45583194 | Msa1327870:intron | 25.0% |
| ! | CTTTAAATGTTCTACAAGTT+TGG | + | chr8_4:45583227-45583246 | None:intergenic | 25.0% |
| ! | CAAACTTGTAGAACATTTAA+AGG | - | chr8_4:45583225-45583244 | Msa1327870:intron | 25.0% |
| ! | CTGCTGTTATATTTATTCTT+GGG | - | chr8_4:45583262-45583281 | Msa1327870:intron | 25.0% |
| ! | TTATATTTATTCTTGGGTTC+TGG | - | chr8_4:45583268-45583287 | Msa1327870:intron | 25.0% |
| ! | AAATTTGGGTAAAATTCTTG+AGG | - | chr8_4:45584002-45584021 | Msa1327870:intron | 25.0% |
| ! | GAGTTTATTATATGCAACAT+AGG | + | chr8_4:45584060-45584079 | None:intergenic | 25.0% |
| !! | AATAAACTCTGAGAAAATCA+TGG | - | chr8_4:45584071-45584090 | Msa1327870:intron | 25.0% |
| !!! | CTTTTTTGGTAGTAAATAGA+TGG | + | chr8_4:45584297-45584316 | None:intergenic | 25.0% |
| ! | TACTACCAAAAAAGCTAAAA+AGG | - | chr8_4:45584303-45584322 | Msa1327870:intron | 25.0% |
| !!! | TAGATCCTTTTTAGCTTTTT+TGG | + | chr8_4:45584311-45584330 | None:intergenic | 25.0% |
| ! | AAAAGCTAAAAAGGATCTAA+CGG | - | chr8_4:45584312-45584331 | Msa1327870:intron | 25.0% |
| !! | CTACTGAAAATCCTTTTATT+TGG | - | chr8_4:45585295-45585314 | Msa1327870:intron | 25.0% |
| ! | CTCGTTACTATAAAATCTAA+AGG | + | chr8_4:45585465-45585484 | None:intergenic | 25.0% |
| ! | AGAGATATGATAGAACATTA+TGG | - | chr8_4:45585588-45585607 | Msa1327870:intron | 25.0% |
| ! | ACAAATCTTGTATCCATATA+TGG | + | chr8_4:45585821-45585840 | None:intergenic | 25.0% |
| ! | ATATATGGATACAAGATTTG+TGG | - | chr8_4:45585820-45585839 | Msa1327870:intron | 25.0% |
| ! | ACAAGATTTGTGGTATTATA+AGG | - | chr8_4:45585830-45585849 | Msa1327870:intron | 25.0% |
| ! | AACTTCATCAGCAAAATATA+GGG | + | chr8_4:45586158-45586177 | None:intergenic | 25.0% |
| ! | GACTCATTTATAACAGATAA+AGG | + | chr8_4:45586271-45586290 | None:intergenic | 25.0% |
| !!! | TTAACTTGTTGACAAGTTTA+AGG | - | chr8_4:45586407-45586426 | Msa1327870:intron | 25.0% |
| !! | TTGTCACAAGTTTTTATCAA+TGG | - | chr8_4:45586825-45586844 | Msa1327870:CDS | 25.0% |
| !! | AAGTTTTTATCAATGGTGAT+CGG | - | chr8_4:45586832-45586851 | Msa1327870:CDS | 25.0% |
| ! | ATACACACTAATACAATGAT+TGG | + | chr8_4:45587236-45587255 | None:intergenic | 25.0% |
| !! | ATGACAATACAACTCTAAAA+GGG | + | chr8_4:45587581-45587600 | None:intergenic | 25.0% |
| ! | AATTTCAACCGAAAATAACA+AGG | + | chr8_4:45587716-45587735 | None:intergenic | 25.0% |
| ! | GGATGTAAACAAATTCTTTA+TGG | + | chr8_4:45587925-45587944 | None:intergenic | 25.0% |
| ! | TAGTTAGATTGTATGAATAG+AGG | - | chr8_4:45588066-45588085 | Msa1327870:intron | 25.0% |
| ! | AGTTAGATTGTATGAATAGA+GGG | - | chr8_4:45588067-45588086 | Msa1327870:intron | 25.0% |
| !! | TGTTGATTGGCTATTAAAAT+TGG | - | chr8_4:45588101-45588120 | Msa1327870:intron | 25.0% |
| !! | GTTGATTGGCTATTAAAATT+GGG | - | chr8_4:45588102-45588121 | Msa1327870:intron | 25.0% |
| ! | CAAAATAGAACTAACATCAT+AGG | + | chr8_4:45588273-45588292 | None:intergenic | 25.0% |
| ! | ATTTAGATGATTATATCCCT+TGG | - | chr8_4:45588308-45588327 | Msa1327870:intron | 25.0% |
| ! | GTACAAGTTAAAAACACTAA+CGG | + | chr8_4:45588502-45588521 | None:intergenic | 25.0% |
| !!! | TAGTGTTTTTAACTTGTACA+TGG | - | chr8_4:45588503-45588522 | Msa1327870:intron | 25.0% |
| TGAAGAAGGTCAAAGAATTT+AGG | + | chr8_4:45581167-45581186 | None:intergenic | 30.0% | |
| GAAAAGAAGGAAAATGAAGA+AGG | + | chr8_4:45581181-45581200 | None:intergenic | 30.0% | |
| !!! | GAATTTCTAGGGTTTTGAAA+TGG | + | chr8_4:45581217-45581236 | None:intergenic | 30.0% |
| GTAATGGTTGAAGAATTTCT+AGG | + | chr8_4:45581229-45581248 | None:intergenic | 30.0% | |
| TCGCAATTCTAACACAAATT+CGG | + | chr8_4:45581612-45581631 | None:intergenic | 30.0% | |
| CTAAAATGGTTGTTTACTCT+TGG | - | chr8_4:45581957-45581976 | Msa1327870:intron | 30.0% | |
| !! | TCTTCATTTATTTGGCTTTG+TGG | - | chr8_4:45582052-45582071 | Msa1327870:intron | 30.0% |
| TACTGAAGAATGATTTGACT+TGG | + | chr8_4:45582364-45582383 | None:intergenic | 30.0% | |
| AAATAACACTACACTTTCTC+TGG | - | chr8_4:45582593-45582612 | Msa1327870:CDS | 30.0% | |
| TCTAAGAAATTCAAGAGTCT+TGG | - | chr8_4:45582663-45582682 | Msa1327870:intron | 30.0% | |
| !!! | GATAGGTTTTGAATGGTTTT+GGG | + | chr8_4:45582725-45582744 | None:intergenic | 30.0% |
| !!! | AGATAGGTTTTGAATGGTTT+TGG | + | chr8_4:45582726-45582745 | None:intergenic | 30.0% |
| !!! | ACTATGAGATAGGTTTTGAA+TGG | + | chr8_4:45582732-45582751 | None:intergenic | 30.0% |
| !!! | TCTGCCATACTTTTTTACAT+CGG | - | chr8_4:45582996-45583015 | Msa1327870:CDS | 30.0% |
| CAGACATTGGATACATATTA+GGG | - | chr8_4:45583076-45583095 | Msa1327870:CDS | 30.0% | |
| AGACATTGGATACATATTAG+GGG | - | chr8_4:45583077-45583096 | Msa1327870:CDS | 30.0% | |
| GCTGCTGTTATATTTATTCT+TGG | - | chr8_4:45583261-45583280 | Msa1327870:intron | 30.0% | |
| AAAATCAACGATTCTCATTG+TGG | + | chr8_4:45583712-45583731 | None:intergenic | 30.0% | |
| CTTGTCTTAAAATACTTGTC+TGG | - | chr8_4:45583735-45583754 | Msa1327870:CDS | 30.0% | |
| ! | TAACACTTTTGCTCATACTT+AGG | - | chr8_4:45583777-45583796 | Msa1327870:CDS | 30.0% |
| ATAACACCAAAATAGTAGCA+AGG | + | chr8_4:45583908-45583927 | None:intergenic | 30.0% | |
| GTTAATAGTGTGCAGAAATA+TGG | + | chr8_4:45583932-45583951 | None:intergenic | 30.0% | |
| ATAATACACACATATCCCTT+AGG | + | chr8_4:45584144-45584163 | None:intergenic | 30.0% | |
| !! | GTAGTAAATAGATGGATTGA+AGG | + | chr8_4:45584289-45584308 | None:intergenic | 30.0% |
| !!! | TTATTTTTGGCTTTGACAGA+TGG | + | chr8_4:45584380-45584399 | None:intergenic | 30.0% |
| CATGTTAAAGATCTCATAAG+TGG | - | chr8_4:45584511-45584530 | Msa1327870:intron | 30.0% | |
| AAGCCCAAATACATAAACAT+TGG | + | chr8_4:45584594-45584613 | None:intergenic | 30.0% | |
| !!! | TCAAGATTTTGACTATGATC+AGG | - | chr8_4:45584645-45584664 | Msa1327870:intron | 30.0% |
| GATCAGAACAAAATCATTTG+TGG | + | chr8_4:45584903-45584922 | None:intergenic | 30.0% | |
| GTAAATCATGCAATACTCAA+CGG | + | chr8_4:45585070-45585089 | None:intergenic | 30.0% | |
| ! | GTTTTTCTTACCTTAACAGA+TGG | - | chr8_4:45585192-45585211 | Msa1327870:intron | 30.0% |
| AAGCTCTATTTGTCAAGAAA+GGG | + | chr8_4:45585220-45585239 | None:intergenic | 30.0% | |
| AATATGAAGGCCCAAATAAA+AGG | + | chr8_4:45585309-45585328 | None:intergenic | 30.0% | |
| CAACAGAAAGTCAAATATGA+AGG | + | chr8_4:45585322-45585341 | None:intergenic | 30.0% | |
| TTATTAGATCAGCTATGCTT+AGG | + | chr8_4:45585361-45585380 | None:intergenic | 30.0% | |
| GATAGGTGAAAAAAAAAAGG+TGG | + | chr8_4:45585388-45585407 | None:intergenic | 30.0% | |
| ! | ATATGTTTGAAACTTGACCT+AGG | - | chr8_4:45585415-45585434 | Msa1327870:intron | 30.0% |
| ! | TATGTTTGAAACTTGACCTA+GGG | - | chr8_4:45585416-45585435 | Msa1327870:intron | 30.0% |
| ! | GATTTTATAGTAACGAGAGT+AGG | - | chr8_4:45585468-45585487 | Msa1327870:intron | 30.0% |
| AGATGTAGAGATTAATCAGT+TGG | - | chr8_4:45585563-45585582 | Msa1327870:intron | 30.0% | |
| GAAAAAACTAGACAAACTGA+AGG | + | chr8_4:45585697-45585716 | None:intergenic | 30.0% | |
| TACTAAAATCACGAGATTTG+TGG | + | chr8_4:45585923-45585942 | None:intergenic | 30.0% | |
| GAACTTCATCAGCAAAATAT+AGG | + | chr8_4:45586159-45586178 | None:intergenic | 30.0% | |
| ! | CCATTTTGTTCATCCAATAA+AGG | + | chr8_4:45586226-45586245 | None:intergenic | 30.0% |
| CCTTTATTGGATGAACAAAA+TGG | - | chr8_4:45586223-45586242 | Msa1327870:CDS | 30.0% | |
| !! | ACAGATAAAGGCTTTTGTTT+TGG | + | chr8_4:45586259-45586278 | None:intergenic | 30.0% |
| TCTGTTATAAATGAGTCCAA+TGG | - | chr8_4:45586274-45586293 | Msa1327870:CDS | 30.0% | |
| ATAAAGATCTACTTCCAAAG+TGG | + | chr8_4:45586720-45586739 | None:intergenic | 30.0% | |
| GAAGTAGATCTTTATGATCA+AGG | - | chr8_4:45586725-45586744 | Msa1327870:intron | 30.0% | |
| TATATATGGAAGTTCATGAC+AGG | - | chr8_4:45587281-45587300 | Msa1327870:intron | 30.0% | |
| ! | TAGATGTTGTGCTTAACTTT+TGG | - | chr8_4:45587407-45587426 | Msa1327870:intron | 30.0% |
| ! | ACATGTTTGAATTTTTCTGC+AGG | - | chr8_4:45587453-45587472 | Msa1327870:intron | 30.0% |
| ! | TTTGAATTTTTCTGCAGGAT+TGG | - | chr8_4:45587458-45587477 | Msa1327870:intron | 30.0% |
| GATGACAATACAACTCTAAA+AGG | + | chr8_4:45587582-45587601 | None:intergenic | 30.0% | |
| ! | ATTTATTAGTTTGATGGCAC+TGG | - | chr8_4:45587615-45587634 | Msa1327870:intron | 30.0% |
| !!! | CAACACTTCCTTGTTATTTT+CGG | - | chr8_4:45587705-45587724 | Msa1327870:intron | 30.0% |
| TTATGTATGTGGTATCCAAA+TGG | - | chr8_4:45587840-45587859 | Msa1327870:intron | 30.0% | |
| GTTAGATTGTATGAATAGAG+GGG | - | chr8_4:45588068-45588087 | Msa1327870:intron | 30.0% | |
| TACCTGATGTCTTTAATAGT+AGG | - | chr8_4:45588143-45588162 | Msa1327870:intron | 30.0% | |
| AACCTACTATTAAAGACATC+AGG | + | chr8_4:45588148-45588167 | None:intergenic | 30.0% | |
| ! | CAATATTCCAGCATTTGTTT+TGG | - | chr8_4:45588364-45588383 | Msa1327870:intron | 30.0% |
| ! | AAGTCATCAGGTTTTCATTT+CGG | - | chr8_4:45588455-45588474 | Msa1327870:intron | 30.0% |
| TCATGTTATTCCAATTTCTG+AGG | + | chr8_4:45588530-45588549 | None:intergenic | 30.0% | |
| !! | ACATGAAAATTTTGGAGAGT+AGG | - | chr8_4:45588544-45588563 | Msa1327870:CDS | 30.0% |
| TGCACAATAGAAGAAAACTT+AGG | - | chr8_4:45588685-45588704 | Msa1327870:CDS | 30.0% | |
| ! | AAACTTACACGTTTTATGGA+GGG | + | chr8_4:45588845-45588864 | None:intergenic | 30.0% |
| ! | TCTCAAACTTACACGTTTTA+TGG | + | chr8_4:45588849-45588868 | None:intergenic | 30.0% |
| AGAAGGTCAAAGAATTTAGG+CGG | + | chr8_4:45581164-45581183 | None:intergenic | 35.0% | |
| ! | AACGAAGCATTATTCTTCGT+CGG | + | chr8_4:45581464-45581483 | None:intergenic | 35.0% |
| GGAAATTCGAAACTAATCTG+AGG | + | chr8_4:45581713-45581732 | None:intergenic | 35.0% | |
| TGACGATTAAAAAGACGCAT+AGG | - | chr8_4:45581872-45581891 | Msa1327870:intron | 35.0% | |
| TGGTTGTTTACTCTTGGATT+TGG | - | chr8_4:45581963-45581982 | Msa1327870:intron | 35.0% | |
| GGTTGTTTACTCTTGGATTT+GGG | - | chr8_4:45581964-45581983 | Msa1327870:intron | 35.0% | |
| !!! | TTTGGTTTTGATGCAGACAT+TGG | - | chr8_4:45582012-45582031 | Msa1327870:intron | 35.0% |
| !!! | TTGGTTTTGATGCAGACATT+GGG | - | chr8_4:45582013-45582032 | Msa1327870:intron | 35.0% |
| TGAAAAGAAAACCTACCACA+AGG | + | chr8_4:45582090-45582109 | None:intergenic | 35.0% | |
| ! | TTCAACCTTGTGTTGGTATT+TGG | - | chr8_4:45582872-45582891 | Msa1327870:intron | 35.0% |
| GCAGACATTGGATACATATT+AGG | - | chr8_4:45583075-45583094 | Msa1327870:CDS | 35.0% | |
| CTAGAGAATCACTGTACTAA+TGG | + | chr8_4:45583545-45583564 | None:intergenic | 35.0% | |
| TTCTCTAGTTGTTAGTTCAC+AGG | - | chr8_4:45583557-45583576 | Msa1327870:intron | 35.0% | |
| ! | TTTGATACATTGCGTTGATC+AGG | + | chr8_4:45583804-45583823 | None:intergenic | 35.0% |
| !! | AACATTCTAGGATATTCGTC+TGG | - | chr8_4:45583855-45583874 | Msa1327870:CDS | 35.0% |
| ! | TTCTTGAGGTGATTTTCGTA+TGG | - | chr8_4:45584016-45584035 | Msa1327870:intron | 35.0% |
| CTGAGAAAATCATGGATTTG+AGG | - | chr8_4:45584079-45584098 | Msa1327870:intron | 35.0% | |
| TCATGGATTTGAGGAAATCA+TGG | - | chr8_4:45584088-45584107 | Msa1327870:intron | 35.0% | |
| !! | AACCATACAAAAAGCACCTA+AGG | - | chr8_4:45584125-45584144 | Msa1327870:intron | 35.0% |
| !! | ACCATACAAAAAGCACCTAA+GGG | - | chr8_4:45584126-45584145 | Msa1327870:intron | 35.0% |
| !!! | AGATTTTGACTATGATCAGG+AGG | - | chr8_4:45584648-45584667 | Msa1327870:intron | 35.0% |
| !!! | GATTTTGACTATGATCAGGA+GGG | - | chr8_4:45584649-45584668 | Msa1327870:intron | 35.0% |
| !!! | ATTTTGACTATGATCAGGAG+GGG | - | chr8_4:45584650-45584669 | Msa1327870:intron | 35.0% |
| TATCATTCTCACTATCTGTC+AGG | + | chr8_4:45584720-45584739 | None:intergenic | 35.0% | |
| TGACAGATAGTGAGAATGAT+AGG | - | chr8_4:45584719-45584738 | Msa1327870:intron | 35.0% | |
| AAAGAACGAGTTTGACATCT+CGG | + | chr8_4:45584983-45585002 | None:intergenic | 35.0% | |
| ! | ACTTGCGATCTTGATAACAT+TGG | - | chr8_4:45585027-45585046 | Msa1327870:intron | 35.0% |
| CAAGCTCTATTTGTCAAGAA+AGG | + | chr8_4:45585221-45585240 | None:intergenic | 35.0% | |
| ! | ATGTTTGAAACTTGACCTAG+GGG | - | chr8_4:45585417-45585436 | Msa1327870:intron | 35.0% |
| ACAGAAGTCCATTAATGTAG+AGG | - | chr8_4:45585874-45585893 | Msa1327870:intron | 35.0% | |
| !! | CGTGATTTTAGTACCTTAGT+AGG | - | chr8_4:45585930-45585949 | Msa1327870:intron | 35.0% |
| ATCTACTAGCTAATAACTCC+AGG | + | chr8_4:45586007-45586026 | None:intergenic | 35.0% | |
| TGTTTACTTGCAGTAGTAAG+CGG | + | chr8_4:45586181-45586200 | None:intergenic | 35.0% | |
| ATCAGATTCTGCTCCTTTAT+TGG | - | chr8_4:45586210-45586229 | Msa1327870:CDS | 35.0% | |
| TTATTGGTATTGTCTTGTGC+TGG | - | chr8_4:45586565-45586584 | Msa1327870:intron | 35.0% | |
| ! | TCCCTTCTTTTTGTTCGATA+CGG | - | chr8_4:45586652-45586671 | Msa1327870:intron | 35.0% |
| TCCGTATCGAACAAAAAGAA+GGG | + | chr8_4:45586656-45586675 | None:intergenic | 35.0% | |
| ATCCGTATCGAACAAAAAGA+AGG | + | chr8_4:45586657-45586676 | None:intergenic | 35.0% | |
| ! | TCTTTTTGTTCGATACGGAT+TGG | - | chr8_4:45586657-45586676 | Msa1327870:intron | 35.0% |
| ATGGGAAGAGAAGTTTATCA+TGG | - | chr8_4:45586680-45586699 | Msa1327870:intron | 35.0% | |
| TGGGAAGAGAAGTTTATCAT+GGG | - | chr8_4:45586681-45586700 | Msa1327870:intron | 35.0% | |
| TTTATCATGGGGATCCAAAA+GGG | - | chr8_4:45586693-45586712 | Msa1327870:intron | 35.0% | |
| ! | TATGATCAAGGTGTTAGAGA+AGG | - | chr8_4:45586737-45586756 | Msa1327870:intron | 35.0% |
| !! | GAACCAATGTGTAAGTTGAT+GGG | - | chr8_4:45586958-45586977 | Msa1327870:intron | 35.0% |
| !! | TTTTGTCGTCTTTGTTTGCA+TGG | - | chr8_4:45587008-45587027 | Msa1327870:intron | 35.0% |
| AGAAGATTGGTAGGAAAAGA+AGG | + | chr8_4:45587210-45587229 | None:intergenic | 35.0% | |
| ! | CAATGATTGGTCAAGAAGAT+TGG | + | chr8_4:45587223-45587242 | None:intergenic | 35.0% |
| ! | CGAAAATAACAAGGAAGTGT+TGG | + | chr8_4:45587707-45587726 | None:intergenic | 35.0% |
| TGTTCGAAAATGAATTGCAC+TGG | + | chr8_4:45587739-45587758 | None:intergenic | 35.0% | |
| ! | AGTGCAATTCATTTTCGAAC+AGG | - | chr8_4:45587738-45587757 | Msa1327870:intron | 35.0% |
| ! | GTGCAATTCATTTTCGAACA+GGG | - | chr8_4:45587739-45587758 | Msa1327870:intron | 35.0% |
| ! | GCTAATTTTCATTTAGCACG+AGG | + | chr8_4:45587792-45587811 | None:intergenic | 35.0% |
| ! | GAAAATTAGCTACTTTGAGC+TGG | - | chr8_4:45587802-45587821 | Msa1327870:intron | 35.0% |
| TGTTGCAAACCTTCCTAATT+GGG | + | chr8_4:45587952-45587971 | None:intergenic | 35.0% | |
| AAGGTTTGCAACAGAAGTTA+GGG | - | chr8_4:45587959-45587978 | Msa1327870:intron | 35.0% | |
| TTGGCTATTAAAATTGGGAG+TGG | - | chr8_4:45588107-45588126 | Msa1327870:intron | 35.0% | |
| ATGATTATATCCCTTGGTTC+TGG | - | chr8_4:45588314-45588333 | Msa1327870:intron | 35.0% | |
| TTGAAACTGCTAGAAAGGTT+TGG | + | chr8_4:45588437-45588456 | None:intergenic | 35.0% | |
| ATGACTTGAAACTGCTAGAA+AGG | + | chr8_4:45588442-45588461 | None:intergenic | 35.0% | |
| ! | GTTGCTTTCCATTACACAAA+AGG | - | chr8_4:45588584-45588603 | Msa1327870:CDS | 35.0% |
| TGATAGTTAATCTTGCGACT+TGG | - | chr8_4:45588781-45588800 | Msa1327870:exon | 35.0% | |
| GATAGTTAATCTTGCGACTT+GGG | - | chr8_4:45588782-45588801 | Msa1327870:exon | 35.0% | |
| ! | CAAACTTACACGTTTTATGG+AGG | + | chr8_4:45588846-45588865 | None:intergenic | 35.0% |
| TGTCTGAAAGCTAATCTTAG+AGG | - | chr8_4:45588934-45588953 | Msa1327870:five_prime_UTR | 35.0% | |
| GAAGGTCAAAGAATTTAGGC+GGG | + | chr8_4:45581163-45581182 | None:intergenic | 40.0% | |
| GAATGGAATCGTGGAAAAGA+AGG | + | chr8_4:45581194-45581213 | None:intergenic | 40.0% | |
| TTGAAATGGGAATGGAATCG+TGG | + | chr8_4:45581203-45581222 | None:intergenic | 40.0% | |
| !!! | CTAGGGTTTTGAAATGGGAA+TGG | + | chr8_4:45581211-45581230 | None:intergenic | 40.0% |
| TCTTCTCACACCTTACATTC+AGG | - | chr8_4:45581550-45581569 | Msa1327870:three_prime_UTR | 40.0% | |
| ! | ATGATGGTGTGTCACATTCA+GGG | - | chr8_4:45581933-45581952 | Msa1327870:intron | 40.0% |
| GTCACATTCAGGGACTAAAA+TGG | - | chr8_4:45581943-45581962 | Msa1327870:intron | 40.0% | |
| TTGATGCAGACATTGGGAAT+AGG | - | chr8_4:45582019-45582038 | Msa1327870:intron | 40.0% | |
| TGATGCAGACATTGGGAATA+GGG | - | chr8_4:45582020-45582039 | Msa1327870:intron | 40.0% | |
| GTGCGAGCTTACAAATAGTT+AGG | + | chr8_4:45582315-45582334 | None:intergenic | 40.0% | |
| GCACTATTCACACTTATCTC+AGG | - | chr8_4:45582566-45582585 | Msa1327870:intron | 40.0% | |
| AGAACAAGCTCTTCGATTCT+TGG | + | chr8_4:45582698-45582717 | None:intergenic | 40.0% | |
| GGAGAAAGTGACTATGAGAT+AGG | + | chr8_4:45582742-45582761 | None:intergenic | 40.0% | |
| TTACAGGTTCAACCTTGTGT+TGG | - | chr8_4:45582865-45582884 | Msa1327870:intron | 40.0% | |
| TCACTCCAAATACCAACACA+AGG | + | chr8_4:45582880-45582899 | None:intergenic | 40.0% | |
| AGAGATCCTGCTAGAATGAA+TGG | + | chr8_4:45582934-45582953 | None:intergenic | 40.0% | |
| ATTTAAAGGGACCCGAACAA+GGG | - | chr8_4:45583239-45583258 | Msa1327870:intron | 40.0% | |
| ATATAACAGCAGCCCTTGTT+CGG | + | chr8_4:45583254-45583273 | None:intergenic | 40.0% | |
| GCGCAAGTTATCTCTATACA+AGG | + | chr8_4:45583512-45583531 | None:intergenic | 40.0% | |
| ! | CAAATGCTGTCTTTTGCTCA+TGG | - | chr8_4:45583820-45583839 | Msa1327870:CDS | 40.0% |
| ! | GTGAGACCTTGCTACTATTT+TGG | - | chr8_4:45583899-45583918 | Msa1327870:CDS | 40.0% |
| !! | TCCCTTAGGTGCTTTTTGTA+TGG | + | chr8_4:45584130-45584149 | None:intergenic | 40.0% |
| ! | AAAGGATCTAACGGAAGTGT+TGG | - | chr8_4:45584321-45584340 | Msa1327870:intron | 40.0% |
| !!! | TTTTTGGCTTTGACAGATGG+AGG | + | chr8_4:45584377-45584396 | None:intergenic | 40.0% |
| TCCGATATGTGTTAGACACT+CGG | - | chr8_4:45584445-45584464 | Msa1327870:intron | 40.0% | |
| TCCGAGTGTCTAACACATAT+CGG | + | chr8_4:45584449-45584468 | None:intergenic | 40.0% | |
| ATAGATCCTAGTTGCGATCT+TGG | + | chr8_4:45584678-45584697 | None:intergenic | 40.0% | |
| GGATCTATCCCAAAGGTTTA+TGG | - | chr8_4:45584690-45584709 | Msa1327870:intron | 40.0% | |
| GTGAGAATGATAGGCAGAAA+TGG | - | chr8_4:45584728-45584747 | Msa1327870:intron | 40.0% | |
| TGTGGAGAAGGTCATAAAAG+AGG | - | chr8_4:45584770-45584789 | Msa1327870:intron | 40.0% | |
| GTGGAGAAGGTCATAAAAGA+GGG | - | chr8_4:45584771-45584790 | Msa1327870:intron | 40.0% | |
| AAGGTCATAAAAGAGGGTGA+AGG | - | chr8_4:45584777-45584796 | Msa1327870:intron | 40.0% | |
| TGTGGATCACAAAATCGCTT+CGG | + | chr8_4:45584885-45584904 | None:intergenic | 40.0% | |
| ! | GCAATACTCAACGGATTTCA+TGG | + | chr8_4:45585061-45585080 | None:intergenic | 40.0% |
| AGAAAGGGAACCATCTGTTA+AGG | + | chr8_4:45585205-45585224 | None:intergenic | 40.0% | |
| ! | TGTTTGAAACTTGACCTAGG+GGG | - | chr8_4:45585418-45585437 | Msa1327870:intron | 40.0% |
| TATAGTAACGAGAGTAGGTG+AGG | - | chr8_4:45585473-45585492 | Msa1327870:intron | 40.0% | |
| TTGTTCTGACTCCACTTAGT+AGG | - | chr8_4:45585617-45585636 | Msa1327870:intron | 40.0% | |
| ! | CCAAGCTTTATCCTACTAAG+TGG | + | chr8_4:45585631-45585650 | None:intergenic | 40.0% |
| CCACTTAGTAGGATAAAGCT+TGG | - | chr8_4:45585628-45585647 | Msa1327870:intron | 40.0% | |
| CATATATGGACTCTGACAAC+AGG | + | chr8_4:45585807-45585826 | None:intergenic | 40.0% | |
| CTGTTGTCAGAGTCCATATA+TGG | - | chr8_4:45585805-45585824 | Msa1327870:intron | 40.0% | |
| ! | AAAGCAGTGCTATTGTTTCC+TGG | - | chr8_4:45585986-45586005 | Msa1327870:intron | 40.0% |
| AAGGAGCAGAATCTGATAAC+TGG | + | chr8_4:45586207-45586226 | None:intergenic | 40.0% | |
| ATCCTCGCTTAACTTACCAT+TGG | + | chr8_4:45586293-45586312 | None:intergenic | 40.0% | |
| AAGCATGAGAGTTTCAATGC+TGG | - | chr8_4:45586337-45586356 | Msa1327870:intron | 40.0% | |
| AGCATGAGAGTTTCAATGCT+GGG | - | chr8_4:45586338-45586357 | Msa1327870:intron | 40.0% | |
| ! | GAAAATTTAATGGATGGGCC+TGG | - | chr8_4:45586373-45586392 | Msa1327870:intron | 40.0% |
| AAGTTAACCAATACTGCTCC+AGG | + | chr8_4:45586394-45586413 | None:intergenic | 40.0% | |
| GGGTTGGAGGAAATATAAGA+AGG | + | chr8_4:45586608-45586627 | None:intergenic | 40.0% | |
| !! | TTTGTTCGATACGGATTGGA+TGG | - | chr8_4:45586661-45586680 | Msa1327870:intron | 40.0% |
| !! | TTGTTCGATACGGATTGGAT+GGG | - | chr8_4:45586662-45586681 | Msa1327870:intron | 40.0% |
| GGGAAGAGAAGTTTATCATG+GGG | - | chr8_4:45586682-45586701 | Msa1327870:intron | 40.0% | |
| GTTTATCATGGGGATCCAAA+AGG | - | chr8_4:45586692-45586711 | Msa1327870:intron | 40.0% | |
| !! | ATGGCTTTATAGGTTGTGCT+TGG | - | chr8_4:45586916-45586935 | Msa1327870:intron | 40.0% |
| ! | CGAACCAATGTGTAAGTTGA+TGG | - | chr8_4:45586957-45586976 | Msa1327870:intron | 40.0% |
| ! | TGATGGGTGCAAGATTAGTA+TGG | - | chr8_4:45586974-45586993 | Msa1327870:intron | 40.0% |
| GATGGGTGCAAGATTAGTAT+GGG | - | chr8_4:45586975-45586994 | Msa1327870:CDS | 40.0% | |
| TCTGTCCATGATTATACTCG+AGG | - | chr8_4:45587057-45587076 | Msa1327870:intron | 40.0% | |
| CTGTCCATGATTATACTCGA+GGG | - | chr8_4:45587058-45587077 | Msa1327870:intron | 40.0% | |
| CTATCCCTCGAGTATAATCA+TGG | + | chr8_4:45587065-45587084 | None:intergenic | 40.0% | |
| AAGCAGAACAAACACAACCA+GGG | + | chr8_4:45587127-45587146 | None:intergenic | 40.0% | |
| ! | GATTGGTCAAGAAGATTGGT+AGG | + | chr8_4:45587219-45587238 | None:intergenic | 40.0% |
| AACTCTGCTGTAACAGCAAA+GGG | + | chr8_4:45587347-45587366 | None:intergenic | 40.0% | |
| TCTACATCTGATACCAACCT+TGG | + | chr8_4:45587391-45587410 | None:intergenic | 40.0% | |
| !!! | TTTTCTGCAGGATTGGCTAT+AGG | - | chr8_4:45587465-45587484 | Msa1327870:intron | 40.0% |
| TGAGAAGAAAATGGTACCTG+TGG | + | chr8_4:45587516-45587535 | None:intergenic | 40.0% | |
| ! | TATTAGTTTGATGGCACTGG+TGG | - | chr8_4:45587618-45587637 | Msa1327870:intron | 40.0% |
| TGGTATCCAAATGGAACTAG+TGG | - | chr8_4:45587849-45587868 | Msa1327870:intron | 40.0% | |
| TTTACATCCAACCCCCAATT+AGG | - | chr8_4:45587936-45587955 | Msa1327870:intron | 40.0% | |
| TTGCAAACCTTCCTAATTGG+GGG | + | chr8_4:45587950-45587969 | None:intergenic | 40.0% | |
| GTTGCAAACCTTCCTAATTG+GGG | + | chr8_4:45587951-45587970 | None:intergenic | 40.0% | |
| CTGTTGCAAACCTTCCTAAT+TGG | + | chr8_4:45587953-45587972 | None:intergenic | 40.0% | |
| GAAGGTTTGCAACAGAAGTT+AGG | - | chr8_4:45587958-45587977 | Msa1327870:intron | 40.0% | |
| !! | AAGCCTTGTCTTTTAAGAGC+AGG | - | chr8_4:45588019-45588038 | Msa1327870:CDS | 40.0% |
| AGACCTGCTCTTAAAAGACA+AGG | + | chr8_4:45588025-45588044 | None:intergenic | 40.0% | |
| ACATCAGGTAATTGAGAGCT+TGG | + | chr8_4:45588133-45588152 | None:intergenic | 40.0% | |
| ! | TCTAGCAGTTTCAAGTCATC+AGG | - | chr8_4:45588443-45588462 | Msa1327870:intron | 40.0% |
| !! | TTTTCATTTCGGCTAGCTGT+TGG | - | chr8_4:45588466-45588485 | Msa1327870:intron | 40.0% |
| ! | TTTCATTTCGGCTAGCTGTT+GGG | - | chr8_4:45588467-45588486 | Msa1327870:intron | 40.0% |
| TGTACATGGTCCTCAGAAAT+TGG | - | chr8_4:45588517-45588536 | Msa1327870:intron | 40.0% | |
| ! | GTAATGCGCCTTTTGTGTAA+TGG | + | chr8_4:45588595-45588614 | None:intergenic | 40.0% |
| ! | ACGTTTTATGGAGGGAAAAG+TGG | + | chr8_4:45588837-45588856 | None:intergenic | 40.0% |
| !! | GTTTGAGACTTTTGCCTGAA+TGG | - | chr8_4:45588861-45588880 | Msa1327870:five_prime_UTR | 40.0% |
| GCAGATCTGACTTTCAACCA+TGG | - | chr8_4:45581120-45581139 | Msa1327870:three_prime_UTR | 45.0% | |
| CAAAGAATTTAGGCGGGTGA+AGG | + | chr8_4:45581157-45581176 | None:intergenic | 45.0% | |
| TTCACAACACGTCGTCGTAA+TGG | - | chr8_4:45581283-45581302 | Msa1327870:three_prime_UTR | 45.0% | |
| AAGAAATGATTCTTCCGCCC+CGG | - | chr8_4:45581352-45581371 | Msa1327870:three_prime_UTR | 45.0% | |
| GCGGTGAATTAAGATCGATC+CGG | + | chr8_4:45581424-45581443 | None:intergenic | 45.0% | |
| AAACTGAACACCAGCAGCAA+CGG | + | chr8_4:45581510-45581529 | None:intergenic | 45.0% | |
| TGCTGGTGTTCAGTTTGGTT+GGG | - | chr8_4:45581514-45581533 | Msa1327870:three_prime_UTR | 45.0% | |
| CGTGTTAGGACCTGAATGTA+AGG | + | chr8_4:45581563-45581582 | None:intergenic | 45.0% | |
| ! | GATGATGGTGTGTCACATTC+AGG | - | chr8_4:45581932-45581951 | Msa1327870:intron | 45.0% |
| CAAGCTCTTCGATTCTTGGA+GGG | + | chr8_4:45582694-45582713 | None:intergenic | 45.0% | |
| ACAAGCTCTTCGATTCTTGG+AGG | + | chr8_4:45582695-45582714 | None:intergenic | 45.0% | |
| GGCAGTTACAGTTATCGTGT+CGG | + | chr8_4:45582801-45582820 | None:intergenic | 45.0% | |
| AGACGTCCATTCATTCTAGC+AGG | - | chr8_4:45582925-45582944 | Msa1327870:intron | 45.0% | |
| ! | ATCGGGTTTTCTGCAGACAT+TGG | - | chr8_4:45583063-45583082 | Msa1327870:CDS | 45.0% |
| !! | GGGATACAAAAGAGCATTGC+AGG | - | chr8_4:45583097-45583116 | Msa1327870:CDS | 45.0% |
| CATTTAAAGGGACCCGAACA+AGG | - | chr8_4:45583238-45583257 | Msa1327870:intron | 45.0% | |
| TATAACAGCAGCCCTTGTTC+GGG | + | chr8_4:45583253-45583272 | None:intergenic | 45.0% | |
| ACTTACCTGCACTGTGTTGT+TGG | + | chr8_4:45583307-45583326 | None:intergenic | 45.0% | |
| !! | TAGAGCACTTTTGGCAGATC+TGG | - | chr8_4:45583439-45583458 | Msa1327870:intron | 45.0% |
| ! | TGCTGTCTTTTGCTCATGGA+TGG | - | chr8_4:45583824-45583843 | Msa1327870:CDS | 45.0% |
| ! | TTTTGCTCATGGATGGCAGT+GGG | - | chr8_4:45583831-45583850 | Msa1327870:CDS | 45.0% |
| CGAACACTTCATTCTAGCGT+CGG | + | chr8_4:45584415-45584434 | None:intergenic | 45.0% | |
| ACGTCTTCAACTTGGAGTGT+TGG | - | chr8_4:45584470-45584489 | Msa1327870:intron | 45.0% | |
| GCAACTAGGATCTATCCCAA+AGG | - | chr8_4:45584683-45584702 | Msa1327870:intron | 45.0% | |
| ATAAAAGAGGGTGAAGGTCG+AGG | - | chr8_4:45584783-45584802 | Msa1327870:intron | 45.0% | |
| ! | TATTAGGGCTTTTCCCAACC+AGG | - | chr8_4:45584848-45584867 | Msa1327870:CDS | 45.0% |
| !! | GACAAATAGAGCTTGCTGTG+AGG | - | chr8_4:45585226-45585245 | Msa1327870:intron | 45.0% |
| TGAGGCATGTGGCAATCTTA+AGG | - | chr8_4:45585244-45585263 | Msa1327870:intron | 45.0% | |
| GCATTTCTTGTTGCTGTGGT+AGG | - | chr8_4:45585269-45585288 | Msa1327870:intron | 45.0% | |
| ! | AAACTTGACCTAGGGGGTTT+TGG | - | chr8_4:45585424-45585443 | Msa1327870:intron | 45.0% |
| GAGGGTAGTCAAATCACTAG+AGG | - | chr8_4:45585498-45585517 | Msa1327870:intron | 45.0% | |
| GTTGCATCATGGACCTACTA+AGG | + | chr8_4:45585946-45585965 | None:intergenic | 45.0% | |
| GTCCAATGGTAAGTTAAGCG+AGG | - | chr8_4:45586288-45586307 | Msa1327870:intron | 45.0% | |
| GCATGAGAGTTTCAATGCTG+GGG | - | chr8_4:45586339-45586358 | Msa1327870:intron | 45.0% | |
| !! | GCATTCAGTGCTGGTTGTAA+TGG | - | chr8_4:45586447-45586466 | Msa1327870:intron | 45.0% |
| TGGTTGTAATGGCTCTCACT+TGG | - | chr8_4:45586458-45586477 | Msa1327870:intron | 45.0% | |
| GGTTGTAATGGCTCTCACTT+GGG | - | chr8_4:45586459-45586478 | Msa1327870:intron | 45.0% | |
| ATGACAACTGCAGGTAGACA+GGG | + | chr8_4:45586628-45586647 | None:intergenic | 45.0% | |
| ! | ACTTCCAAAGTGGTCCCTTT+TGG | + | chr8_4:45586710-45586729 | None:intergenic | 45.0% |
| ! | GGTGTTAGAGAAGGTGCATT+TGG | - | chr8_4:45586746-45586765 | Msa1327870:intron | 45.0% |
| GCACCCATCAACTTACACAT+TGG | + | chr8_4:45586964-45586983 | None:intergenic | 45.0% | |
| CGAGGGATAGAACATGCAAT+TGG | - | chr8_4:45587075-45587094 | Msa1327870:intron | 45.0% | |
| CATGCAATTGGAGCAAGTGA+AGG | - | chr8_4:45587087-45587106 | Msa1327870:intron | 45.0% | |
| AGGAATCAAGTATGCTTCCC+TGG | - | chr8_4:45587107-45587126 | Msa1327870:intron | 45.0% | |
| CAAGCAGAACAAACACAACC+AGG | + | chr8_4:45587128-45587147 | None:intergenic | 45.0% | |
| CTGGTTGTGTTTGTTCTGCT+TGG | - | chr8_4:45587126-45587145 | Msa1327870:CDS | 45.0% | |
| TCTGCTTGGATTTCCACTTG+CGG | - | chr8_4:45587140-45587159 | Msa1327870:CDS | 45.0% | |
| AAAACTTCACTCACCGCAAG+TGG | + | chr8_4:45587156-45587175 | None:intergenic | 45.0% | |
| AACAGCAAAGGGAACACTGT+AGG | + | chr8_4:45587336-45587355 | None:intergenic | 45.0% | |
| CAACTCTGCTGTAACAGCAA+AGG | + | chr8_4:45587348-45587367 | None:intergenic | 45.0% | |
| TCTTGCAATTGTTGCTCCAC+AGG | - | chr8_4:45587497-45587516 | Msa1327870:intron | 45.0% | |
| CTGCTAGTCCTCTCCATATT+TGG | - | chr8_4:45587547-45587566 | Msa1327870:intron | 45.0% | |
| TCTGCTCTCCAAATATGGAG+AGG | + | chr8_4:45587558-45587577 | None:intergenic | 45.0% | |
| AAGGGTCTGCTCTCCAAATA+TGG | + | chr8_4:45587563-45587582 | None:intergenic | 45.0% | |
| !! | CAAGGAAGTGTTGGTTGCAT+AGG | + | chr8_4:45587698-45587717 | None:intergenic | 45.0% |
| CCAATGCCACTAGTTCCATT+TGG | + | chr8_4:45587858-45587877 | None:intergenic | 45.0% | |
| CCAAATGGAACTAGTGGCAT+TGG | - | chr8_4:45587855-45587874 | Msa1327870:intron | 45.0% | |
| !! | GTGGCATTGGTCTTCATCAA+TGG | - | chr8_4:45587868-45587887 | Msa1327870:intron | 45.0% |
| AAACCTTCCTAATTGGGGGT+TGG | + | chr8_4:45587946-45587965 | None:intergenic | 45.0% | |
| GTTTGCAACAGAAGTTAGGG+TGG | - | chr8_4:45587962-45587981 | Msa1327870:intron | 45.0% | |
| CCTGTAACACTTGATCCCTT+GGG | + | chr8_4:45587989-45588008 | None:intergenic | 45.0% | |
| ACCTGTAACACTTGATCCCT+TGG | + | chr8_4:45587990-45588009 | None:intergenic | 45.0% | |
| !! | GGGACAGCTAGTTTGTTGAT+TGG | - | chr8_4:45588088-45588107 | Msa1327870:intron | 45.0% |
| ATGGACGCCAAAACAAATGC+TGG | + | chr8_4:45588374-45588393 | None:intergenic | 45.0% | |
| TAGAGTTGCAACAATGCCAC+CGG | + | chr8_4:45588408-45588427 | None:intergenic | 45.0% | |
| TCATTCTTCCTCCCACATTG+CGG | - | chr8_4:45588629-45588648 | Msa1327870:CDS | 45.0% | |
| AATACAGACACCCGCAATGT+GGG | + | chr8_4:45588643-45588662 | None:intergenic | 45.0% | |
| ACTCAACATGTGCTCCATTC+AGG | + | chr8_4:45588878-45588897 | None:intergenic | 45.0% | |
| !! | ATTTGTTTAAATTTAAATTT+AGG | - | chr8_4:45583409-45583428 | Msa1327870:CDS | 5.0% |
| !! | TTTGTTTAAATTTAAATTTA+GGG | - | chr8_4:45583410-45583429 | Msa1327870:CDS | 5.0% |
| !!! | GAAAATAAAAATATTATTTT+TGG | + | chr8_4:45584393-45584412 | None:intergenic | 5.0% |
| !! | AAATAAATATTATAGTATTA+GGG | - | chr8_4:45584833-45584852 | Msa1327870:CDS | 5.0% |
| !! | AATAGAATTAATAAAAAAAA+AGG | + | chr8_4:45585734-45585753 | None:intergenic | 5.0% |
| ! | TGAAGGAAGCTATGGTGCCA+TGG | + | chr8_4:45581140-45581159 | None:intergenic | 50.0% |
| ACAACACGTCGTCGTAATGG+CGG | - | chr8_4:45581286-45581305 | Msa1327870:three_prime_UTR | 50.0% | |
| GTCGGTAATTGATCTCCACG+CGG | + | chr8_4:45581446-45581465 | None:intergenic | 50.0% | |
| CTTAGTTGTACCGTTGCTGC+TGG | - | chr8_4:45581497-45581516 | Msa1327870:three_prime_UTR | 50.0% | |
| GTTGCTGCTGGTGTTCAGTT+TGG | - | chr8_4:45581509-45581528 | Msa1327870:three_prime_UTR | 50.0% | |
| CTGCTGGTGTTCAGTTTGGT+TGG | - | chr8_4:45581513-45581532 | Msa1327870:three_prime_UTR | 50.0% | |
| CTACCACAAGGCCTGTAATG+GGG | + | chr8_4:45582078-45582097 | None:intergenic | 50.0% | |
| CCTACCACAAGGCCTGTAAT+GGG | + | chr8_4:45582079-45582098 | None:intergenic | 50.0% | |
| ACCTACCACAAGGCCTGTAA+TGG | + | chr8_4:45582080-45582099 | None:intergenic | 50.0% | |
| CCGTCGTTCAACTGCATCAT+CGG | + | chr8_4:45583374-45583393 | None:intergenic | 50.0% | |
| CCGATGATGCAGTTGAACGA+CGG | - | chr8_4:45583371-45583390 | Msa1327870:CDS | 50.0% | |
| !! | TCTGCCAAAAGTGCTCTAGC+TGG | + | chr8_4:45583437-45583456 | None:intergenic | 50.0% |
| ! | CTTTTGCTCATGGATGGCAG+TGG | - | chr8_4:45583830-45583849 | Msa1327870:CDS | 50.0% |
| ATGGCAGTGGGCAACATTCT+AGG | - | chr8_4:45583843-45583862 | Msa1327870:CDS | 50.0% | |
| ! | GGATATTCGTCTGGTGCTAG+TGG | - | chr8_4:45583864-45583883 | Msa1327870:CDS | 50.0% |
| ACTCGGACACGTCTTCAACT+TGG | - | chr8_4:45584462-45584481 | Msa1327870:intron | 50.0% | |
| CAGGCGAGCCATAAACCTTT+GGG | + | chr8_4:45584701-45584720 | None:intergenic | 50.0% | |
| TCAGGCGAGCCATAAACCTT+TGG | + | chr8_4:45584702-45584721 | None:intergenic | 50.0% | |
| GCAGAAATGGTCGTGAGAGA+GGG | - | chr8_4:45584741-45584760 | Msa1327870:intron | 50.0% | |
| AGAGGGTGAAGATGTGGAGA+AGG | - | chr8_4:45584758-45584777 | Msa1327870:intron | 50.0% | |
| TTGCTCACGATTCCGATCGT+AGG | - | chr8_4:45584951-45584970 | Msa1327870:intron | 50.0% | |
| TGCTCACGATTCCGATCGTA+GGG | - | chr8_4:45584952-45584971 | Msa1327870:intron | 50.0% | |
| GGCAGCATTTCTTGTTGCTG+TGG | - | chr8_4:45585265-45585284 | Msa1327870:intron | 50.0% | |
| AACGAGAGTAGGTGAGGTAG+AGG | - | chr8_4:45585479-45585498 | Msa1327870:intron | 50.0% | |
| ACGAGAGTAGGTGAGGTAGA+GGG | - | chr8_4:45585480-45585499 | Msa1327870:intron | 50.0% | |
| GTGCTTCTCACGTTGCATCA+TGG | + | chr8_4:45585957-45585976 | None:intergenic | 50.0% | |
| ! | AGCACTGAATGCATAGCAGG+TGG | + | chr8_4:45586439-45586458 | None:intergenic | 50.0% |
| ACCTGCTATGCATTCAGTGC+TGG | - | chr8_4:45586438-45586457 | Msa1327870:intron | 50.0% | |
| ! | ACCAGCACTGAATGCATAGC+AGG | + | chr8_4:45586442-45586461 | None:intergenic | 50.0% |
| GTAATGGCTCTCACTTGGGT+AGG | - | chr8_4:45586463-45586482 | Msa1327870:intron | 50.0% | |
| CTCTCACTTGGGTAGGTACT+AGG | - | chr8_4:45586470-45586489 | Msa1327870:intron | 50.0% | |
| CATGACAACTGCAGGTAGAC+AGG | + | chr8_4:45586629-45586648 | None:intergenic | 50.0% | |
| CTGTCTACCTGCAGTTGTCA+TGG | - | chr8_4:45586627-45586646 | Msa1327870:intron | 50.0% | |
| AGGGAAACCATGACAACTGC+AGG | + | chr8_4:45586637-45586656 | None:intergenic | 50.0% | |
| GGATCCAAAAGGGACCACTT+TGG | - | chr8_4:45586703-45586722 | Msa1327870:intron | 50.0% | |
| ! | GTCGTCTTTGTTTGCATGGC+TGG | - | chr8_4:45587012-45587031 | Msa1327870:intron | 50.0% |
| !! | GCAGAGTTGACTGCTGATTC+AGG | - | chr8_4:45587359-45587378 | Msa1327870:intron | 50.0% |
| !! | GAGTTGACTGCTGATTCAGG+TGG | - | chr8_4:45587362-45587381 | Msa1327870:intron | 50.0% |
| !! | TTGACTGCTGATTCAGGTGG+TGG | - | chr8_4:45587365-45587384 | Msa1327870:intron | 50.0% |
| CATCCAACCCCCAATTAGGA+AGG | - | chr8_4:45587940-45587959 | Msa1327870:intron | 50.0% | |
| AGAAGTTAGGGTGGACCCAA+GGG | - | chr8_4:45587971-45587990 | Msa1327870:intron | 50.0% | |
| CCCAAGGGATCAAGTGTTAC+AGG | - | chr8_4:45587986-45588005 | Msa1327870:intron | 50.0% | |
| !! | TATCCCTTGGTTCTGGTCCA+TGG | - | chr8_4:45588321-45588340 | Msa1327870:intron | 50.0% |
| !! | ATCCCTTGGTTCTGGTCCAT+GGG | - | chr8_4:45588322-45588341 | Msa1327870:intron | 50.0% |
| ATCCCATGGACCAGAACCAA+GGG | + | chr8_4:45588327-45588346 | None:intergenic | 50.0% | |
| CATTCTTCCTCCCACATTGC+GGG | - | chr8_4:45588630-45588649 | Msa1327870:CDS | 50.0% | |
| CAATACAGACACCCGCAATG+TGG | + | chr8_4:45588644-45588663 | None:intergenic | 50.0% | |
| TAGGCGGGTGAAGGAAGCTA+TGG | + | chr8_4:45581148-45581167 | None:intergenic | 55.0% | |
| CAACACGTCGTCGTAATGGC+GGG | - | chr8_4:45581287-45581306 | Msa1327870:three_prime_UTR | 55.0% | |
| ATGCCGACGAGTTCGACTTC+CGG | + | chr8_4:45581374-45581393 | None:intergenic | 55.0% | |
| ! | TTAAGATCGATCCGGTGCCG+AGG | + | chr8_4:45581416-45581435 | None:intergenic | 55.0% |
| GATCTTAATTCACCGCCGCG+TGG | - | chr8_4:45581428-45581447 | Msa1327870:three_prime_UTR | 55.0% | |
| GGTAATTGATCTCCACGCGG+CGG | + | chr8_4:45581443-45581462 | None:intergenic | 55.0% | |
| !! | TGGCTTTGTGGCCCCATTAC+AGG | - | chr8_4:45582064-45582083 | Msa1327870:intron | 55.0% |
| ! | CCCATTACAGGCCTTGTGGT+AGG | - | chr8_4:45582076-45582095 | Msa1327870:intron | 55.0% |
| ! | CCTGCACTGTGTTGTTGGCA+AGG | + | chr8_4:45583302-45583321 | None:intergenic | 55.0% |
| CCTTGCCAACAACACAGTGC+AGG | - | chr8_4:45583299-45583318 | Msa1327870:intron | 55.0% | |
| ! | GCACTTTTGGCAGATCTGGC+AGG | - | chr8_4:45583443-45583462 | Msa1327870:intron | 55.0% |
| ! | CGTCTGGTGCTAGTGGAAAG+TGG | - | chr8_4:45583871-45583890 | Msa1327870:CDS | 55.0% |
| CCACGGCTAGAATACAGCTC+TGG | + | chr8_4:45584354-45584373 | None:intergenic | 55.0% | |
| CCAGAGCTGTATTCTAGCCG+TGG | - | chr8_4:45584351-45584370 | Msa1327870:intron | 55.0% | |
| GCTTTGACAGATGGAGGCCA+CGG | + | chr8_4:45584371-45584390 | None:intergenic | 55.0% | |
| ! | GGGGTACCAAGATCGCAACT+AGG | - | chr8_4:45584669-45584688 | Msa1327870:intron | 55.0% |
| GGCAGAAATGGTCGTGAGAG+AGG | - | chr8_4:45584740-45584759 | Msa1327870:intron | 55.0% | |
| CGTGAGAGAGGGTGAAGATG+TGG | - | chr8_4:45584752-45584771 | Msa1327870:intron | 55.0% | |
| TTTCCCAACCAGGTTGCGCA+TGG | - | chr8_4:45584858-45584877 | Msa1327870:CDS | 55.0% | |
| GCTCACGATTCCGATCGTAG+GGG | - | chr8_4:45584953-45584972 | Msa1327870:intron | 55.0% | |
| CTCACGATTCCGATCGTAGG+GGG | - | chr8_4:45584954-45584973 | Msa1327870:intron | 55.0% | |
| !! | AGAGCTTGCTGTGAGGCATG+TGG | - | chr8_4:45585233-45585252 | Msa1327870:intron | 55.0% |
| !! | ACCTAGGGGGTTTTGGCATG+TGG | - | chr8_4:45585431-45585450 | Msa1327870:intron | 55.0% |
| TCCACATGCCAAAACCCCCT+AGG | + | chr8_4:45585435-45585454 | None:intergenic | 55.0% | |
| GTTAAGCGAGGATCGCTCTG+AGG | - | chr8_4:45586300-45586319 | Msa1327870:intron | 55.0% | |
| CAACTGCAGGTAGACAGGGT+TGG | + | chr8_4:45586624-45586643 | None:intergenic | 55.0% | |
| ! | ATTCAGGTGGTGGCCAAGGT+TGG | - | chr8_4:45587375-45587394 | Msa1327870:intron | 55.0% |
| CAGAAGTTAGGGTGGACCCA+AGG | - | chr8_4:45587970-45587989 | Msa1327870:intron | 55.0% | |
| CATCCCATGGACCAGAACCA+AGG | + | chr8_4:45588328-45588347 | None:intergenic | 55.0% | |
| GGTCCATGGGATGCTCTCTT+TGG | - | chr8_4:45588335-45588354 | Msa1327870:intron | 55.0% | |
| !! | CCACCAAAGAGAGCATCCCA+TGG | + | chr8_4:45588341-45588360 | None:intergenic | 55.0% |
| CCATGGGATGCTCTCTTTGG+TGG | - | chr8_4:45588338-45588357 | Msa1327870:intron | 55.0% | |
| TGGGATGCTCTCTTTGGTGG+TGG | - | chr8_4:45588341-45588360 | Msa1327870:intron | 55.0% | |
| TGCCGACGAGTTCGACTTCC+GGG | + | chr8_4:45581373-45581392 | None:intergenic | 60.0% | |
| ! | GTCGAACTCGTCGGCATCGA+CGG | - | chr8_4:45581377-45581396 | Msa1327870:three_prime_UTR | 60.0% |
| TGGCCCCATTACAGGCCTTG+TGG | - | chr8_4:45582072-45582091 | Msa1327870:intron | 60.0% | |
| !! | GGGGCCAGCTAGAGCACTTT+TGG | - | chr8_4:45583430-45583449 | Msa1327870:CDS | 60.0% |
| AAGGTCGAGGCTGCGAGAGA+CGG | - | chr8_4:45584796-45584815 | Msa1327870:intron | 60.0% | |
| GGACCATGCGCAACCTGGTT+GGG | + | chr8_4:45584864-45584883 | None:intergenic | 60.0% | |
| TCTCGGTCACCCCCTACGAT+CGG | + | chr8_4:45584966-45584985 | None:intergenic | 60.0% | |
| GGATGGGCCTGGAGCAGTAT+TGG | - | chr8_4:45586384-45586403 | Msa1327870:intron | 60.0% | |
| CTGCAGGTAGACAGGGTTGG+AGG | + | chr8_4:45586621-45586640 | None:intergenic | 60.0% | |
| ! | GCTGATTCAGGTGGTGGCCA+AGG | - | chr8_4:45587371-45587390 | Msa1327870:intron | 60.0% |
| GCGTCCATCTGTGCTCTAGC+CGG | - | chr8_4:45588386-45588405 | Msa1327870:intron | 60.0% | |
| TCCATCTGTGCTCTAGCCGG+TGG | - | chr8_4:45588389-45588408 | Msa1327870:intron | 60.0% | |
| ACAGACACCCGCAATGTGGG+AGG | + | chr8_4:45588640-45588659 | None:intergenic | 60.0% | |
| GACGAGTTCGACTTCCGGGG+CGG | + | chr8_4:45581369-45581388 | None:intergenic | 65.0% | |
| GCCCCGGAAGTCGAACTCGT+CGG | - | chr8_4:45581368-45581387 | Msa1327870:three_prime_UTR | 65.0% | |
| GCCGACGAGTTCGACTTCCG+GGG | + | chr8_4:45581372-45581391 | None:intergenic | 65.0% | |
| ACGGCGACGGCGATGAACCT+CGG | - | chr8_4:45581396-45581415 | Msa1327870:three_prime_UTR | 65.0% | |
| ACGGCGATGAACCTCGGCAC+CGG | - | chr8_4:45581402-45581421 | Msa1327870:three_prime_UTR | 65.0% | |
| AGGCTGCGAGAGACGGTGCA+AGG | - | chr8_4:45584803-45584822 | Msa1327870:intron | 65.0% | |
| CGGACCATGCGCAACCTGGT+TGG | + | chr8_4:45584865-45584884 | None:intergenic | 65.0% | |
| GCTTCGGACCATGCGCAACC+TGG | + | chr8_4:45584869-45584888 | None:intergenic | 65.0% | |
| ! | GCCACCGGCTAGAGCACAGA+TGG | + | chr8_4:45588393-45588412 | None:intergenic | 65.0% |
| !! | CTCGTCGGCATCGACGGCGA+CGG | - | chr8_4:45581383-45581402 | Msa1327870:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 45581120 | 45588973 | 45581120 | ID=Msa1327870;Name=Msa1327870 |
| chr8_4 | mRNA | 45581120 | 45588973 | 45581120 | ID=Msa1327870-mRNA-1;Parent=Msa1327870;Name=Msa1327870-mRNA-1;_AED=0.14;_eAED=0.14;_QI=182|0.76|0.71|1|1|1|14|492|544 |
| chr8_4 | exon | 45581120 | 45581779 | 45581120 | ID=Msa1327870-mRNA-1:exon:12734;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45582575 | 45582618 | 45582575 | ID=Msa1327870-mRNA-1:exon:12733;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45582701 | 45582733 | 45582701 | ID=Msa1327870-mRNA-1:exon:12732;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45582991 | 45583165 | 45582991 | ID=Msa1327870-mRNA-1:exon:12731;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45583309 | 45583452 | 45583309 | ID=Msa1327870-mRNA-1:exon:12730;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45583613 | 45583966 | 45583613 | ID=Msa1327870-mRNA-1:exon:12729;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45584807 | 45584882 | 45584807 | ID=Msa1327870-mRNA-1:exon:12728;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45586195 | 45586294 | 45586195 | ID=Msa1327870-mRNA-1:exon:12727;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45586629 | 45586662 | 45586629 | ID=Msa1327870-mRNA-1:exon:12726;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45586773 | 45586857 | 45586773 | ID=Msa1327870-mRNA-1:exon:12725;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45586975 | 45587014 | 45586975 | ID=Msa1327870-mRNA-1:exon:12724;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45587124 | 45587169 | 45587124 | ID=Msa1327870-mRNA-1:exon:12723;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45588000 | 45588065 | 45588000 | ID=Msa1327870-mRNA-1:exon:12722;Parent=Msa1327870-mRNA-1 |
| chr8_4 | exon | 45588522 | 45588973 | 45588522 | ID=Msa1327870-mRNA-1:exon:12721;Parent=Msa1327870-mRNA-1 |
| chr8_4 | five_prime_UTR | 45588792 | 45588973 | 45588792 | ID=Msa1327870-mRNA-1:five_prime_utr;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45588522 | 45588791 | 45588522 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45588000 | 45588065 | 45588000 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45587124 | 45587169 | 45587124 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45586975 | 45587014 | 45586975 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45586773 | 45586857 | 45586773 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45586629 | 45586662 | 45586629 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45586195 | 45586294 | 45586195 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45584807 | 45584882 | 45584807 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45583613 | 45583966 | 45583613 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45583309 | 45583452 | 45583309 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45582991 | 45583165 | 45582991 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45582701 | 45582733 | 45582701 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45582575 | 45582618 | 45582575 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | CDS | 45581612 | 45581779 | 45581612 | ID=Msa1327870-mRNA-1:cds;Parent=Msa1327870-mRNA-1 |
| chr8_4 | three_prime_UTR | 45581120 | 45581611 | 45581120 | ID=Msa1327870-mRNA-1:three_prime_utr;Parent=Msa1327870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
