AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0142430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0142430 MtrunA17_Chr8g0384021 93.025 1319 36 2 1 1263 1 1319 0.0 2503
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0142430 AT3G18730.1 46.293 1322 607 20 16 1262 17 1310 0.0 1075

Find 253 sgRNAs with CRISPR-Local

Find 799 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGAAGTGCTTAACATTTC+TGG 0.089131 1_4:+1332052 Msa0142430:CDS
AGTAGGTTACATCACAATTT+AGG 0.138361 1_4:+1324982 Msa0142430:CDS
GAAGAAACTTTACAATTTAC+AGG 0.213785 1_4:+1330411 Msa0142430:CDS
TGGCCCAACAACTTTGTTTC+AGG 0.217721 1_4:+1331505 Msa0142430:CDS
AGGACATTTCTATGAATAAA+AGG 0.220207 1_4:+1335227 Msa0142430:three_prime_UTR
GTTTGACATTGACTCGTTAA+AGG 0.223882 1_4:+1329311 Msa0142430:CDS
ACACTTTATGTGCTGAATAA+TGG 0.232404 1_4:-1329615 None:intergenic
AATTAATATTGGTAATGTTT+TGG 0.234892 1_4:+1327350 Msa0142430:CDS
CGACGATGAACGGTGTTGTT+TGG 0.235947 1_4:-1324259 None:intergenic
CCAAGCTTTCTACTTTAAAA+AGG 0.242882 1_4:+1332616 Msa0142430:CDS
TTCTTCAGCACCTTGATCTT+TGG 0.259197 1_4:-1330394 None:intergenic
AGTGAGCATCAAGCAGTTTC+TGG 0.262583 1_4:+1328542 Msa0142430:CDS
GCAGGGACCTTGACTTTATC+AGG 0.265053 1_4:+1332812 Msa0142430:CDS
TACCTTCTTCTTTGGCGTTC+CGG 0.271035 1_4:-1324324 None:intergenic
GGAAACTGTTGAAAATATTA+TGG 0.291437 1_4:+1329661 Msa0142430:CDS
AAATGTCAACTTGGGCTTGC+TGG 0.292500 1_4:+1334519 Msa0142430:CDS
AGGGCAGAAGCTGCTGCTTC+TGG 0.296208 1_4:+1334868 Msa0142430:CDS
GATAGCCTTTGCCAGCTTGC+AGG 0.297613 1_4:+1332794 Msa0142430:CDS
GGACACAATCACCCTGTAAC+TGG 0.299379 1_4:+1332570 Msa0142430:intron
CACTTTATGTGCTGAATAAT+GGG 0.305515 1_4:-1329614 None:intergenic
TTTGATCTATAAGTTGTCTT+TGG 0.307239 1_4:-1328356 None:intergenic
GACGATGAACGGTGTTGTTT+GGG 0.309620 1_4:-1324258 None:intergenic
ACCACAGCATTCCCAGTTAC+AGG 0.313274 1_4:-1332582 None:intergenic
CAATTTAGGGAATGTGTATA+TGG 0.313585 1_4:+1324996 Msa0142430:CDS
CACATAATTGAGGCTCTTGC+AGG 0.330311 1_4:+1334549 Msa0142430:CDS
ACGGTGGTTACCTTCTTCTT+TGG 0.332835 1_4:-1324332 None:intergenic
ATGGTTGAAGCTTTCATTGA+TGG 0.336748 1_4:+1329701 Msa0142430:CDS
CCTGACTCCTGAAGATGAAT+TGG 0.341764 1_4:+1328382 Msa0142430:CDS
GATATATTGCATGTCGGATT+GGG 0.345438 1_4:+1329241 Msa0142430:CDS
GTAGGTTACATCACAATTTA+GGG 0.345533 1_4:+1324983 Msa0142430:CDS
AATCAGTCCTAGTAAAATTC+AGG 0.346057 1_4:+1328776 Msa0142430:CDS
GACATCTCTCACAATTGTTT+AGG 0.350263 1_4:+1330662 Msa0142430:CDS
TGAATTTCTTTGACATGAAC+TGG 0.352727 1_4:-1334908 None:intergenic
GTACTTTCACACCTTTGTAT+AGG 0.354070 1_4:+1332472 Msa0142430:CDS
ACAATGCTGTCTCAAAGTTT+TGG 0.361105 1_4:+1334488 Msa0142430:CDS
CCAATTCATCTTCAGGAGTC+AGG 0.361308 1_4:-1328382 None:intergenic
ATCTTGGGGAAGTGCATTAC+CGG 0.361904 1_4:+1325118 Msa0142430:CDS
TCATCATCCAATTCATCTTC+AGG 0.367415 1_4:-1328389 None:intergenic
GCCCAAGTTGACATTTCTTA+AGG 0.370537 1_4:-1334512 None:intergenic
AGAAGCGTGTGATGCATATA+AGG 0.372974 1_4:+1327392 Msa0142430:CDS
TGGCAGGTTCTCCCGGAGTA+TGG 0.373131 1_4:+1328875 Msa0142430:intron
GCTAAAGGGTATATTAATCT+TGG 0.373279 1_4:+1325102 Msa0142430:CDS
CTAAAGGGTATATTAATCTT+GGG 0.376172 1_4:+1325103 Msa0142430:CDS
AGTATCTGCTGCAGGAAAAC+GGG 0.377233 1_4:+1325358 Msa0142430:CDS
GATTTGCATTGTAATCGATT+TGG 0.378583 1_4:+1331485 Msa0142430:CDS
GCACTGGTGAAAATTAATAT+TGG 0.384243 1_4:+1327339 Msa0142430:CDS
ATAGTGAAGATAATCAAGTT+AGG 0.388166 1_4:+1334848 Msa0142430:CDS
TAACATTGGTATGCTTGAAA+TGG 0.390187 1_4:+1324867 Msa0142430:CDS
AACGTACTTGTATCATAATT+AGG 0.390793 1_4:-1328662 None:intergenic
TTGTCAGACTTCTGGGTGAC+TGG 0.394961 1_4:-1328511 None:intergenic
TTGCCCAACGCGCTTCTTCA+CGG 0.397193 1_4:-1324351 None:intergenic
AAGTATCTGCTGCAGGAAAA+CGG 0.399328 1_4:+1325357 Msa0142430:CDS
TGGTGTACAGCTTTCTGCCT+TGG 0.400503 1_4:+1327983 Msa0142430:CDS
GCTGTTGAAGCAGACCTTCC+TGG 0.402121 1_4:+1327963 Msa0142430:CDS
TTTAGAGGATGAGGATGCTT+TGG 0.402342 1_4:+1325200 Msa0142430:CDS
TGGAAAATGTACAAAACAAT+TGG 0.406577 1_4:+1326715 Msa0142430:CDS
TTATGAGAAGGCGCTTGGTT+TGG 0.408365 1_4:+1325170 Msa0142430:CDS
TAGTATCAAGTTTCTGCTCC+TGG 0.409281 1_4:-1334756 None:intergenic
TGGTTTGGCGAAGTCTTTAG+AGG 0.410254 1_4:+1325185 Msa0142430:CDS
TTTGGGATGGCAGGTTCTCC+CGG 0.414807 1_4:+1328868 Msa0142430:intron
ATACTTGGAGGCACTGGTAT+TGG 0.417390 1_4:+1332839 Msa0142430:CDS
CAAAACAATTGGCAACTTAG+AGG 0.419791 1_4:+1326726 Msa0142430:CDS
TATATTGACTAAAGAATAAG+AGG 0.420214 1_4:+1335187 Msa0142430:three_prime_UTR
AGTTTCGCTGAAGTTCTTAT+CGG 0.423030 1_4:+1324447 Msa0142430:CDS
TTGAAATTTGCTGAGTGAAA+TGG 0.425143 1_4:-1334942 None:intergenic
TAAAGAAGCAGTTAAAGTTA+TGG 0.429094 1_4:+1325254 Msa0142430:CDS
TGCATCGATCAATGGTGTTA+TGG 0.430412 1_4:-1330609 None:intergenic
GCTCAATGACCTGGAACGTC+TGG 0.430819 1_4:-1328975 None:intergenic
AATCGGCGAAATCTGCTTAC+CGG 0.431632 1_4:+1324305 Msa0142430:CDS
AGATATATTGCATGTCGGAT+TGG 0.434560 1_4:+1329240 Msa0142430:CDS
ACTTTATCAGGACTAATACT+TGG 0.437994 1_4:+1332824 Msa0142430:CDS
TTAGAACCACTAGGAAAGTA+AGG 0.438324 1_4:-1329016 None:intergenic
CCACCGTGAAGAAGCGCGTT+GGG 0.439179 1_4:+1324348 Msa0142430:CDS
CAATCCTCTCCTGAGTATAT+TGG 0.444261 1_4:-1324914 None:intergenic
AACGAAGACTTATTATTTGG+CGG 0.444910 1_4:-1324817 None:intergenic
TATACCTGAAACAAAGTTGT+TGG 0.451537 1_4:-1331509 None:intergenic
GATGATTGTATGTCAAATAG+TGG 0.453901 1_4:+1328314 Msa0142430:CDS
ATTGCTGATGCATTGGACTC+TGG 0.454023 1_4:+1332445 Msa0142430:CDS
ATGGTGTTATGGACAAATCT+TGG 0.456050 1_4:-1330598 None:intergenic
CAAGCTGCAGAAACACTCTA+TGG 0.461807 1_4:+1335027 Msa0142430:CDS
GACTGATACATTGACATAAG+AGG 0.463561 1_4:-1328419 None:intergenic
CTGTAAGAAAGTTTGATTCG+TGG 0.469659 1_4:+1335152 Msa0142430:exon
GGCGAAGTCTTTAGAGGATG+AGG 0.470864 1_4:+1325191 Msa0142430:CDS
CTAAAACTTCCAGACGTTCC+AGG 0.472289 1_4:+1328966 Msa0142430:CDS
AAGAATAAGAGGCAATTCTC+TGG 0.473430 1_4:+1335198 Msa0142430:three_prime_UTR
AAGGTTGGGTGATTCATATC+TGG 0.474819 1_4:+1326627 Msa0142430:CDS
CGAAAGGTATTCACAACATC+AGG 0.475544 1_4:+1331437 Msa0142430:CDS
GAAGTCAAATGAAGAGATAG+AGG 0.478986 1_4:+1328244 Msa0142430:CDS
CGTTAACTAAGTGTACATCT+TGG 0.484209 1_4:+1335359 Msa0142430:three_prime_UTR
GCGAAACTTCATAATCGATT+CGG 0.486422 1_4:-1324432 None:intergenic
ATGACCTTTGTGACAGGCAA+AGG 0.486707 1_4:+1326608 Msa0142430:CDS
AATACGTTAAAGCTCTCAAA+TGG 0.488240 1_4:+1324407 Msa0142430:CDS
GAGATTAGCGAGTATGATGA+TGG 0.489297 1_4:+1324955 Msa0142430:CDS
TGGCAAAGGCTATCGACAAC+CGG 0.489738 1_4:-1332785 None:intergenic
GTCAACCTGCTTTGTAGAGT+TGG 0.492455 1_4:-1328489 None:intergenic
CATTGTCAAGGGGAAGCTAA+AGG 0.492547 1_4:+1325087 Msa0142430:CDS
TCAAATGGTATGAAAAGAGT+TGG 0.494262 1_4:+1326695 Msa0142430:CDS
AGTATGATGATGGGCGTAGT+AGG 0.494266 1_4:+1324965 Msa0142430:CDS
GAAGAAGCCTTGTGTGCTGC+TGG 0.494813 1_4:+1329282 Msa0142430:CDS
GTCCTTAAGAAATGTCAACT+TGG 0.496426 1_4:+1334510 Msa0142430:CDS
GAAACTTGATACTATGAAAG+TGG 0.497234 1_4:+1334765 Msa0142430:CDS
TACGACCCCTTTCAAGTCAC+AGG 0.497390 1_4:+1335064 Msa0142430:CDS
CTTTAGTCAATATATTAACA+TGG 0.497964 1_4:-1335178 None:intergenic
GTTTCAGAGCAACAATCATC+AGG 0.500220 1_4:-1328278 None:intergenic
TAAAAGCTGTTCACAGAACC+AGG 0.501606 1_4:+1334738 Msa0142430:CDS
TGCTGATAATTCTGTTTCAA+CGG 0.502372 1_4:+1334684 Msa0142430:CDS
CAATTCATCTTCAGGAGTCA+GGG 0.504803 1_4:-1328381 None:intergenic
ATCTTACGGCGACTTAACTC+TGG 0.506663 1_4:+1331463 Msa0142430:CDS
CATAAAATTGGACATTGTCA+AGG 0.507240 1_4:+1325075 Msa0142430:CDS
ATTGTCAAGGGGAAGCTAAA+GGG 0.508598 1_4:+1325088 Msa0142430:CDS
AATTAGGCAAGTCTTCTAAC+GGG 0.512043 1_4:-1328646 None:intergenic
ATGTACGTAGACTGCTGCAA+GGG 0.513069 1_4:+1330358 Msa0142430:CDS
CGAGCGCAAGTATCTGCTGC+AGG 0.513407 1_4:+1325350 Msa0142430:CDS
TGCTGAGTGAAATGGCAGTT+GGG 0.513677 1_4:-1334934 None:intergenic
TCTTATTATGAGAAGGCGCT+TGG 0.514420 1_4:+1325165 Msa0142430:CDS
GAGATGTAGCCTCGGCTAGA+GGG 0.515123 1_4:+1325319 Msa0142430:CDS
TCCTTAAGAAATGTCAACTT+GGG 0.518872 1_4:+1334511 Msa0142430:CDS
CGGATTCTCTTTCAGACTAA+CGG 0.519515 1_4:-1324797 None:intergenic
CAAAGAGCTAGCACGCAGCT+AGG 0.521257 1_4:+1324682 Msa0142430:CDS
ATACCTGAAACAAAGTTGTT+GGG 0.522135 1_4:-1331508 None:intergenic
ATAAAATTGGACATTGTCAA+GGG 0.523025 1_4:+1325076 Msa0142430:CDS
ATGCATATAAGGAGAGCTAC+AGG 0.523215 1_4:+1327403 Msa0142430:CDS
AGTAGAACTCACATCATGTA+GGG 0.524653 1_4:-1329098 None:intergenic
AAGTAGAACTCACATCATGT+AGG 0.524815 1_4:-1329099 None:intergenic
CGTTCATCGTCGTTTCTCGA+TGG 0.525239 1_4:+1324270 Msa0142430:exon
GCGCGTTGGGCAAACGTCAT+CGG 0.525249 1_4:+1324361 Msa0142430:CDS
TACCGGAACGCCAAAGAAGA+AGG 0.526433 1_4:+1324322 Msa0142430:CDS
GGAATGTGTATATGGAATTG+AGG 0.527177 1_4:+1325004 Msa0142430:CDS
TGGAGTTGTTCACATAATTG+AGG 0.528217 1_4:+1334539 Msa0142430:CDS
GAAAGTAGTAGTTCTTTCAA+AGG 0.532731 1_4:+1328923 Msa0142430:CDS
GGACATTTCTATGAATAAAA+GGG 0.532895 1_4:+1335228 Msa0142430:three_prime_UTR
ATGTAGGGAATGATGCATCA+TGG 0.533394 1_4:-1329083 None:intergenic
ATAGCCTTTGCCAGCTTGCA+GGG 0.534052 1_4:+1332795 Msa0142430:CDS
ACAACATCAGGTCAATCTTA+CGG 0.534414 1_4:+1331449 Msa0142430:CDS
AAATACTTTAGACGATCAGC+TGG 0.535628 1_4:+1334816 Msa0142430:CDS
AAATGCGATACAGATGTCTC+TGG 0.536190 1_4:+1329037 Msa0142430:CDS
TTTATCAGATAACAGCAGCC+TGG 0.536365 1_4:+1334648 Msa0142430:intron
GATGTGCCTGTGACTTGAAA+GGG 0.536434 1_4:-1335070 None:intergenic
CAGAAACACTCTATGGTTCG+TGG 0.537191 1_4:+1335034 Msa0142430:CDS
GTCTGTGGAACCAAAGATCA+AGG 0.538998 1_4:+1330384 Msa0142430:CDS
AATTCAACAAGGCAATCAAA+TGG 0.539789 1_4:+1326680 Msa0142430:CDS
CCTCTTCATACTTCTGAGTC+CGG 0.540010 1_4:-1325137 None:intergenic
TTATCAGGACTAATACTTGG+AGG 0.540389 1_4:+1332827 Msa0142430:CDS
ATTGATGCTTATAATAACAT+TGG 0.540583 1_4:+1324853 Msa0142430:CDS
TAGTGAAGATAATCAAGTTA+GGG 0.543361 1_4:+1334849 Msa0142430:CDS
CCACAGCATTCCCAGTTACA+GGG 0.543787 1_4:-1332581 None:intergenic
TCATCCTTGCTTTCTCAACA+AGG 0.543876 1_4:-1325392 None:intergenic
GGACTAATACTTGGAGGCAC+TGG 0.546493 1_4:+1332833 Msa0142430:CDS
ATTCAGCACATAAAGTGTGC+TGG 0.546576 1_4:+1329620 Msa0142430:CDS
TGATGATGAAATCATTGCAT+CGG 0.546953 1_4:+1330565 Msa0142430:CDS
AAGTCAAGGTCCCTGCAAGC+TGG 0.547103 1_4:-1332805 None:intergenic
AGCAAGGATGATCGCTGCAT+GGG 0.547239 1_4:+1325404 Msa0142430:CDS
CAGCAAGATTAAGCTCCTCC+AGG 0.548771 1_4:-1334666 None:intergenic
TTGCTGAGTGAAATGGCAGT+TGG 0.550989 1_4:-1334935 None:intergenic
AATCAAACTTTCTTACAGCA+AGG 0.551137 1_4:-1335147 None:intergenic
GATGGACTCAGAGCTCAAAT+CGG 0.551160 1_4:+1324288 Msa0142430:exon
CACATTTAGATCCATACTCC+GGG 0.551397 1_4:-1328886 None:intergenic
AGGTCCCTGCAAGCTGGCAA+AGG 0.552004 1_4:-1332799 None:intergenic
GGGAATGATGCATCATGGGA+TGG 0.552972 1_4:-1329078 None:intergenic
AGAAACATCTAGATCTAGCA+AGG 0.555236 1_4:+1324635 Msa0142430:CDS
AAAGGCTCGAGTCCAAATAC+AGG 0.557390 1_4:+1328941 Msa0142430:CDS
TAATTAGGCAAGTCTTCTAA+CGG 0.558109 1_4:-1328647 None:intergenic
CATCGAGAAACGACGATGAA+CGG 0.558144 1_4:-1324269 None:intergenic
TGTATATGGAATTGAGGAAG+TGG 0.558312 1_4:+1325010 Msa0142430:CDS
GCACATTTAGATCCATACTC+CGG 0.560871 1_4:-1328887 None:intergenic
TAGCGAATGACCTTTGTGAC+AGG 0.560949 1_4:+1326602 Msa0142430:CDS
AATTTCAAGTGCTATTACAA+AGG 0.562599 1_4:+1334957 Msa0142430:CDS
GGAATGATGCATCATGGGAT+GGG 0.562867 1_4:-1329077 None:intergenic
AACGCCTTGTTGAGAAAGCA+AGG 0.563106 1_4:+1325388 Msa0142430:CDS
AACATCAATTGTAACTTGCA+AGG 0.564722 1_4:+1335299 Msa0142430:three_prime_UTR
CGATGCACTGCATTCACAGA+TGG 0.565109 1_4:+1330625 Msa0142430:CDS
GACACAATCACCCTGTAACT+GGG 0.568974 1_4:+1332571 Msa0142430:CDS
TGATGTGCCTGTGACTTGAA+AGG 0.569787 1_4:-1335071 None:intergenic
TCATACCAACTCTACAAAGC+AGG 0.569932 1_4:+1328484 Msa0142430:CDS
CTTTGTGACAGGCAAAGGTT+GGG 0.570383 1_4:+1326613 Msa0142430:CDS
AATATGAGTGGTCTAAAACT+AGG 0.571267 1_4:+1332758 Msa0142430:CDS
CATTATCCATTTCTCAACAA+AGG 0.571546 1_4:+1335101 Msa0142430:CDS
TTTAGTCAATATATTAACAT+GGG 0.572302 1_4:-1335177 None:intergenic
GATGATCGCTGCATGGGAGA+AGG 0.573409 1_4:+1325410 Msa0142430:CDS
TGCAGAGATATATTGCATGT+CGG 0.573604 1_4:+1329235 Msa0142430:intron
CGCTATGAAGAATATGAAGA+GGG 0.574039 1_4:+1325038 Msa0142430:CDS
CCTTTGTGACAGGCAAAGGT+TGG 0.574193 1_4:+1326612 Msa0142430:CDS
AGAGATGTAGCCTCGGCTAG+AGG 0.577083 1_4:+1325318 Msa0142430:CDS
AAGCAAGGATGATCGCTGCA+TGG 0.577140 1_4:+1325403 Msa0142430:CDS
GTCACAACTTGTCAATCCCT+CGG 0.578288 1_4:+1324481 Msa0142430:CDS
ACGCTATGAAGAATATGAAG+AGG 0.578906 1_4:+1325037 Msa0142430:CDS
TGGAGGAGATCTAGAATCGC+TGG 0.579552 1_4:+1329640 Msa0142430:CDS
CTGATCACCAGCAGCACACA+AGG 0.580672 1_4:-1329289 None:intergenic
GCTGAACCTTACTTTCCTAG+TGG 0.585760 1_4:+1329010 Msa0142430:CDS
AGTGGAATGCTCAAGCAGAA+AGG 0.588930 1_4:+1328613 Msa0142430:CDS
ACCACCGTGAAGAAGCGCGT+TGG 0.592374 1_4:+1324347 Msa0142430:CDS
TATATCGTTGCTCAATGACC+TGG 0.592451 1_4:-1328984 None:intergenic
AAGTGGTGAATCTCTCTGAA+AGG 0.594685 1_4:-1324222 None:intergenic
TCAATGTATCAGTCTATCAA+AGG 0.595400 1_4:+1328428 Msa0142430:CDS
TGGTCTAAAACTAGGCAGAC+CGG 0.596349 1_4:+1332766 Msa0142430:CDS
TAAAGGGTATATTAATCTTG+GGG 0.597879 1_4:+1325104 Msa0142430:CDS
CCAGCAGAAAAGAAATCAGA+GGG 0.601683 1_4:+1329366 Msa0142430:CDS
CTGCTGCAAGGGGTTGTCTG+TGG 0.604385 1_4:+1330369 Msa0142430:CDS
CCAACCTTTGCCTGTCACAA+AGG 0.604669 1_4:-1326612 None:intergenic
ATTGTGAATTTGCGAAGGAG+AGG 0.604841 1_4:+1326572 Msa0142430:CDS
AGATTAGCGAGTATGATGAT+GGG 0.605604 1_4:+1324956 Msa0142430:CDS
ATTGAAGATTTGCGACGAAG+AGG 0.606184 1_4:+1324933 Msa0142430:CDS
ACGGAGATAGATTTCACCGA+GGG 0.606325 1_4:-1324497 None:intergenic
CATGATCAGATTTGATGACG+AGG 0.606387 1_4:+1328025 Msa0142430:CDS
TGTAGGGAATGATGCATCAT+GGG 0.607187 1_4:-1329082 None:intergenic
ACTCAAGAGAGATGTAGCCT+CGG 0.607299 1_4:+1325311 Msa0142430:CDS
ATGATTGTATGTCAAATAGT+GGG 0.608032 1_4:+1328315 Msa0142430:CDS
GGTGATTCATATCTGGATGT+CGG 0.608044 1_4:+1326634 Msa0142430:CDS
GGCGCGGTCTTATTATGAGA+AGG 0.609532 1_4:+1325158 Msa0142430:CDS
GAATGCAGTGCATCGATCAA+TGG 0.610466 1_4:-1330617 None:intergenic
TTGCTTATAGGGGCAAGCAC+TGG 0.613554 1_4:+1327323 Msa0142430:intron
GTGTTATGGACAAATCTTGG+AGG 0.614059 1_4:-1330595 None:intergenic
AAGGCAGAAAGCTGTACACC+AGG 0.614490 1_4:-1327981 None:intergenic
ATCCACATGCATCAGTAAGA+CGG 0.616095 1_4:-1332078 None:intergenic
GTGCAGTGTCCCTCTAGCCG+AGG 0.623267 1_4:-1325328 None:intergenic
AGGCAATTCTCTGGTCAATG+AGG 0.624110 1_4:+1335207 Msa0142430:three_prime_UTR
TCAGTATTGTGAATTTGCGA+AGG 0.626543 1_4:+1326567 Msa0142430:intron
GAAAGTGGATGATAATCAAG+AGG 0.626899 1_4:+1334780 Msa0142430:CDS
ATATATTGCATGTCGGATTG+GGG 0.628585 1_4:+1329242 Msa0142430:CDS
TCCAGCAGAAAAGAAATCAG+AGG 0.629533 1_4:+1329365 Msa0142430:CDS
TTACATGATAAAGAAACTAG+AGG 0.632059 1_4:-1335332 None:intergenic
TGATGACGAGGATGATGAAG+TGG 0.635870 1_4:+1328595 Msa0142430:CDS
CATCGGAAAATTGCTCAAGA+CGG 0.637389 1_4:-1324516 None:intergenic
ATCAGATAACAGCAGCCTGG+AGG 0.641615 1_4:+1334651 Msa0142430:intron
TATTAGTCCTGATAAAGTCA+AGG 0.643837 1_4:-1332819 None:intergenic
ACGAGGCGGCCAATATACTC+AGG 0.644083 1_4:+1324905 Msa0142430:CDS
AATGTACGTAGACTGCTGCA+AGG 0.644632 1_4:+1330357 Msa0142430:CDS
CATCATCAGAAAGAATTACA+CGG 0.645079 1_4:-1328577 None:intergenic
CAGAAAGCTGTACACCAGGA+AGG 0.647923 1_4:-1327977 None:intergenic
CAGCACATAAAGTGTGCTGG+AGG 0.648707 1_4:+1329623 Msa0142430:CDS
GTATCTGCTGCAGGAAAACG+GGG 0.648754 1_4:+1325359 Msa0142430:CDS
GGAGCATCTGCAAAATAACA+TGG 0.649768 1_4:+1329682 Msa0142430:CDS
GACAATGGAGAAACTTCGAA+AGG 0.650768 1_4:+1331421 Msa0142430:CDS
TTGATGACGAGGATGAGACC+AGG 0.652930 1_4:+1328036 Msa0142430:CDS
CCGGACTCAGAAGTATGAAG+AGG 0.653448 1_4:+1325137 Msa0142430:CDS
GAAACATCTAGATCTAGCAA+GGG 0.658489 1_4:+1324636 Msa0142430:CDS
GCTTGATAACTTGCACGAGG+CGG 0.663492 1_4:+1324891 Msa0142430:CDS
CTCAGAAGTATGAAGAGGCG+CGG 0.664193 1_4:+1325142 Msa0142430:CDS
CCCTGTAACTGGGAATGCTG+TGG 0.664904 1_4:+1332581 Msa0142430:CDS
TAAAATTGGACATTGTCAAG+GGG 0.672258 1_4:+1325077 Msa0142430:CDS
AACCGTCTTACTGATGCATG+TGG 0.676038 1_4:+1332076 Msa0142430:CDS
GCGGCCAATATACTCAGGAG+AGG 0.678149 1_4:+1324910 Msa0142430:CDS
GATTTATCGTACCTATACAA+AGG 0.678847 1_4:-1332483 None:intergenic
TGTACGTAGACTGCTGCAAG+GGG 0.679759 1_4:+1330359 Msa0142430:CDS
CCCAACGCGCTTCTTCACGG+TGG 0.680138 1_4:-1324348 None:intergenic
CATTTCTATGAATAAAAGGG+TGG 0.691214 1_4:+1335231 Msa0142430:three_prime_UTR
GTATCGCATTTAGAACCACT+AGG 0.698771 1_4:-1329025 None:intergenic
ATGTGCCTGTGACTTGAAAG+GGG 0.702623 1_4:-1335069 None:intergenic
AATTCTTTCTGATGATGACG+AGG 0.714829 1_4:+1328583 Msa0142430:CDS
GGCGATATACTCAAGAACAG+AGG 0.723753 1_4:+1324382 Msa0142430:CDS
GACGGAGATAGATTTCACCG+AGG 0.730813 1_4:-1324498 None:intergenic
GGAGCTTGATAACTTGCACG+AGG 0.747640 1_4:+1324888 Msa0142430:CDS
GAAGCTCAGAAAATTCAACA+AGG 0.757883 1_4:+1326669 Msa0142430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAAATGATAATACAA+TGG - chr1_4:1325668-1325687 None:intergenic 10.0%
!! AATTAGAGAAATTAAATTTA+TGG + chr1_4:1327475-1327494 Msa0142430:intron 10.0%
!! TATCTTGATAAAAATATATT+TGG + chr1_4:1327734-1327753 Msa0142430:intron 10.0%
!! AAAATAGAATTTAATCTAAT+TGG + chr1_4:1333517-1333536 Msa0142430:intron 10.0%
!!! TTAACAAATTTTATTATCAA+TGG + chr1_4:1334402-1334421 Msa0142430:intron 10.0%
!!! ATTTTGATTTGTCATAAAAT+TGG + chr1_4:1325063-1325082 Msa0142430:CDS 15.0%
!! AAACAGTATTAATAAATTCA+TGG - chr1_4:1326235-1326254 None:intergenic 15.0%
!!! AATTAATATTGGTAATGTTT+TGG + chr1_4:1327350-1327369 Msa0142430:CDS 15.0%
!! GAAATGTATATAAAAAGATA+CGG - chr1_4:1328081-1328100 None:intergenic 15.0%
!!! TATCTTTTTATATACATTTC+AGG + chr1_4:1328081-1328100 Msa0142430:intron 15.0%
!! ATGGCATAAAAATAATAAAA+TGG - chr1_4:1329766-1329785 None:intergenic 15.0%
!!! TTATTTTATTTTATCCTTCA+AGG + chr1_4:1330310-1330329 Msa0142430:intron 15.0%
!! TTATATACTTATATTGTATG+TGG + chr1_4:1332313-1332332 Msa0142430:intron 15.0%
!!! TACAGAAATTACATTATTTT+AGG + chr1_4:1332686-1332705 Msa0142430:intron 15.0%
!!! ACAGAAATTACATTATTTTA+GGG + chr1_4:1332687-1332706 Msa0142430:intron 15.0%
!! TAATATGCTTAAATTAATGA+AGG - chr1_4:1333400-1333419 None:intergenic 15.0%
!! ACTTATACAAAAAAACATTA+AGG - chr1_4:1333911-1333930 None:intergenic 15.0%
!!! TTATTTTCTCTAATTAATAC+AGG + chr1_4:1334431-1334450 Msa0142430:intron 15.0%
!!! TATTTTCTCTAATTAATACA+GGG + chr1_4:1334432-1334451 Msa0142430:intron 15.0%
!! TTTAGTCAATATATTAACAT+GGG - chr1_4:1335180-1335199 None:intergenic 15.0%
!! AAAAACGAAGACTTATTATT+TGG - chr1_4:1324823-1324842 None:intergenic 20.0%
!! ATTGATGCTTATAATAACAT+TGG + chr1_4:1324853-1324872 Msa0142430:CDS 20.0%
!! TTCATTGCAAATTGTATAAA+GGG + chr1_4:1325705-1325724 Msa0142430:intron 20.0%
!! AAAGATTATGTATGTTGAAA+GGG - chr1_4:1326137-1326156 None:intergenic 20.0%
!! ATTCACCAAATAATACTAAT+AGG - chr1_4:1326473-1326492 None:intergenic 20.0%
!! TGTTGAATTAAATTAAAGTC+AGG - chr1_4:1326811-1326830 None:intergenic 20.0%
!! TCTATAGTTATTCAAAACAT+TGG + chr1_4:1326870-1326889 Msa0142430:intron 20.0%
!!! AATGTGAGTATATTTCTATT+TGG + chr1_4:1326894-1326913 Msa0142430:intron 20.0%
!! AATCTATTCTAACATATACA+TGG - chr1_4:1326958-1326977 None:intergenic 20.0%
!! ATTTGTCCTAAATTTATCTT+TGG - chr1_4:1327232-1327251 None:intergenic 20.0%
!! ATATAATGTGATCAAATCAA+TGG - chr1_4:1327933-1327952 None:intergenic 20.0%
!! ATCACTTAACAATGTTATAT+GGG - chr1_4:1328723-1328742 None:intergenic 20.0%
!!! TTTTTTACCTGAATTTTACT+AGG - chr1_4:1328786-1328805 None:intergenic 20.0%
!!! ATGACAAAAGTATATAAAAC+AGG - chr1_4:1329401-1329420 None:intergenic 20.0%
!!! GATAATTTTTCAGACAAAAA+AGG - chr1_4:1329802-1329821 None:intergenic 20.0%
!! ATTTGAGCTGTATTATTATT+AGG + chr1_4:1329994-1330013 Msa0142430:intron 20.0%
!! ATAAAAATTCAAATTGTGAC+AGG - chr1_4:1330294-1330313 None:intergenic 20.0%
!! TAAAATATCAATTCAGTGAA+AGG - chr1_4:1331393-1331412 None:intergenic 20.0%
!!! TTTCACTGAATTGATATTTT+AGG + chr1_4:1331392-1331411 Msa0142430:intron 20.0%
!!! TGAATTGATATTTTAGGAAA+TGG + chr1_4:1331398-1331417 Msa0142430:intron 20.0%
!!! GAATTGATATTTTAGGAAAT+GGG + chr1_4:1331399-1331418 Msa0142430:intron 20.0%
!! AAGAACTAATATTAGAAACA+TGG - chr1_4:1331814-1331833 None:intergenic 20.0%
!! TATATCAACAATAGCAAATT+GGG - chr1_4:1331987-1332006 None:intergenic 20.0%
!! ATATATCAACAATAGCAAAT+TGG - chr1_4:1331988-1332007 None:intergenic 20.0%
!!! CTGTATCAAATTTTAAGTTT+TGG + chr1_4:1332265-1332284 Msa0142430:intron 20.0%
!! AAATAGAAGACAAATGATAT+CGG - chr1_4:1332349-1332368 None:intergenic 20.0%
!!! TTGTTAGTTTTCTTGTAATT+AGG + chr1_4:1333158-1333177 Msa0142430:intron 20.0%
!!! TGTTAGTTTTCTTGTAATTA+GGG + chr1_4:1333159-1333178 Msa0142430:intron 20.0%
!! GTCTATATAATGAAAAAATC+TGG - chr1_4:1333241-1333260 None:intergenic 20.0%
!!! AAGTCTTCTAAAAAAAAGTA+GGG + chr1_4:1333627-1333646 Msa0142430:intron 20.0%
!!! TTGTAACGAATTTGTTTTAA+AGG + chr1_4:1334196-1334215 Msa0142430:intron 20.0%
!! TCTATATAAACTGCAAAATA+AGG - chr1_4:1334342-1334361 None:intergenic 20.0%
!! CAGAAAAATTATTATTGCTA+AGG - chr1_4:1335005-1335024 None:intergenic 20.0%
!! CTTTAGTCAATATATTAACA+TGG - chr1_4:1335181-1335200 None:intergenic 20.0%
!!! TATATTGACTAAAGAATAAG+AGG + chr1_4:1335187-1335206 Msa0142430:three_prime_UTR 20.0%
!!! AAAGTATTTTAAGTCTGCTA+TGG + chr1_4:1324768-1324787 Msa0142430:CDS 25.0%
!!! TAATAAGTCTTCGTTTTTGA+AGG + chr1_4:1324825-1324844 Msa0142430:CDS 25.0%
! ATAAAATTGGACATTGTCAA+GGG + chr1_4:1325076-1325095 Msa0142430:CDS 25.0%
!! CTAAAGGGTATATTAATCTT+GGG + chr1_4:1325103-1325122 Msa0142430:CDS 25.0%
!! TAAAGGGTATATTAATCTTG+GGG + chr1_4:1325104-1325123 Msa0142430:CDS 25.0%
! TAAAGAAGCAGTTAAAGTTA+TGG + chr1_4:1325254-1325273 Msa0142430:CDS 25.0%
! GTTCATTGCAAATTGTATAA+AGG + chr1_4:1325704-1325723 Msa0142430:intron 25.0%
! TCATTGCAAATTGTATAAAG+GGG + chr1_4:1325706-1325725 Msa0142430:intron 25.0%
!! TTTTCAACACTATATAGTGA+CGG - chr1_4:1325840-1325859 None:intergenic 25.0%
!!! TGTTGAAAGGGTATTATAAA+AGG - chr1_4:1326125-1326144 None:intergenic 25.0%
! GAAAGATTATGTATGTTGAA+AGG - chr1_4:1326138-1326157 None:intergenic 25.0%
! TTCAACATACATAATCTTTC+TGG + chr1_4:1326138-1326157 Msa0142430:intron 25.0%
! CATCAAATTATAGTATGTGA+AGG - chr1_4:1326449-1326468 None:intergenic 25.0%
! GATGACCTATTAGTATTATT+TGG + chr1_4:1326465-1326484 Msa0142430:intron 25.0%
! AAAACATTGCTCAATAAGAA+AGG - chr1_4:1326545-1326564 None:intergenic 25.0%
! TGGAAAATGTACAAAACAAT+TGG + chr1_4:1326715-1326734 Msa0142430:CDS 25.0%
! CTGAGTATATTTCAAAACAT+TGG + chr1_4:1326841-1326860 Msa0142430:intron 25.0%
!! AAATACAGATACTTTGAAAG+AGG + chr1_4:1326930-1326949 Msa0142430:intron 25.0%
! AGAAGTTCTTAATGTATACA+TGG - chr1_4:1327076-1327095 None:intergenic 25.0%
! ATGCATGTTAGATATAACAT+GGG - chr1_4:1327129-1327148 None:intergenic 25.0%
! GCATATACATAAAAGTTGAA+GGG - chr1_4:1327175-1327194 None:intergenic 25.0%
! TGCATATACATAAAAGTTGA+AGG - chr1_4:1327176-1327195 None:intergenic 25.0%
! CTGTATCCAAAGATAAATTT+AGG + chr1_4:1327223-1327242 Msa0142430:intron 25.0%
! TTCATTACATTAAGCTTTAC+TGG + chr1_4:1327435-1327454 Msa0142430:intron 25.0%
!! AAGTTGTATCAAAAGTATAC+GGG - chr1_4:1327580-1327599 None:intergenic 25.0%
!! CAAGTTGTATCAAAAGTATA+CGG - chr1_4:1327581-1327600 None:intergenic 25.0%
! TTATAGTTGCTTAACAAACT+TGG + chr1_4:1327873-1327892 Msa0142430:intron 25.0%
! TTTGATCACATTATATTTGC+AGG + chr1_4:1327937-1327956 Msa0142430:intron 25.0%
! TGTTTCCATTATCATATTCA+CGG + chr1_4:1328130-1328149 Msa0142430:intron 25.0%
! CAGTAATATACTAATATCAC+AGG - chr1_4:1328170-1328189 None:intergenic 25.0%
!! TATCAGTTGTGATATTTTAC+AGG + chr1_4:1328192-1328211 Msa0142430:intron 25.0%
! ATGATTGTATGTCAAATAGT+GGG + chr1_4:1328315-1328334 Msa0142430:CDS 25.0%
! TTTGATCTATAAGTTGTCTT+TGG - chr1_4:1328359-1328378 None:intergenic 25.0%
! AACGTACTTGTATCATAATT+AGG - chr1_4:1328665-1328684 None:intergenic 25.0%
! CATCACTTAACAATGTTATA+TGG - chr1_4:1328724-1328743 None:intergenic 25.0%
!!! TGATTTTACTTTTAACTGCA+TGG - chr1_4:1328761-1328780 None:intergenic 25.0%
! GTAAAAAATCTTCATCTCTT+TGG + chr1_4:1328798-1328817 Msa0142430:intron 25.0%
! TAATGATGAACATATGAGTT+TGG - chr1_4:1329166-1329185 None:intergenic 25.0%
! TCTGCAAATAGAGAATATAA+AGG - chr1_4:1329221-1329240 None:intergenic 25.0%
! AAAGGAATAAACAAACAGAA+AGG - chr1_4:1329501-1329520 None:intergenic 25.0%
! ACATTCAATCACAAAGTAAA+AGG - chr1_4:1329519-1329538 None:intergenic 25.0%
! GGAAACTGTTGAAAATATTA+TGG + chr1_4:1329661-1329680 Msa0142430:CDS 25.0%
! AAGAACAAAAATCATCAGTA+AGG - chr1_4:1329731-1329750 None:intergenic 25.0%
! AGACAAAAAAGGAGATAAAA+AGG - chr1_4:1329791-1329810 None:intergenic 25.0%
! TGATGATTCATACATTTGTA+CGG - chr1_4:1329940-1329959 None:intergenic 25.0%
!!! TTTATTTTATCCTTCAAGGA+TGG + chr1_4:1330314-1330333 Msa0142430:intron 25.0%
!! AGTCTACGTACATTTTTATT+AGG - chr1_4:1330351-1330370 None:intergenic 25.0%
! GAAGAAACTTTACAATTTAC+AGG + chr1_4:1330411-1330430 Msa0142430:CDS 25.0%
! CAAAACATATCAAAATTCAG+GGG - chr1_4:1330512-1330531 None:intergenic 25.0%
! GCAAAACATATCAAAATTCA+GGG - chr1_4:1330513-1330532 None:intergenic 25.0%
! TGCAAAACATATCAAAATTC+AGG - chr1_4:1330514-1330533 None:intergenic 25.0%
!!! ATATGTTTTGCAACTGATTT+TGG + chr1_4:1330522-1330541 Msa0142430:intron 25.0%
!! TTAGGTACATATTTTATCTG+TGG + chr1_4:1330680-1330699 Msa0142430:intron 25.0%
! ATTTGCAAACAATAATACAG+TGG - chr1_4:1330724-1330743 None:intergenic 25.0%
! AGATTTACTGGATGAAATAA+AGG - chr1_4:1330816-1330835 None:intergenic 25.0%
! TCGAAAATATCTTTCTCTAA+GGG - chr1_4:1331889-1331908 None:intergenic 25.0%
! TTCGAAAATATCTTTCTCTA+AGG - chr1_4:1331890-1331909 None:intergenic 25.0%
! ATATCAACAATAGCAAATTG+GGG - chr1_4:1331986-1332005 None:intergenic 25.0%
! ACAATCTTAAAAAACTGTAC+AGG + chr1_4:1332112-1332131 Msa0142430:CDS 25.0%
! AATAATAGCAATATTCCAGT+TGG - chr1_4:1332162-1332181 None:intergenic 25.0%
! ATTTGATACAGACATTATCA+CGG - chr1_4:1332256-1332275 None:intergenic 25.0%
!!! AGCAATTTTTTGAATGGTTT+TGG - chr1_4:1332431-1332450 None:intergenic 25.0%
! AAGTTGAATATCTTCATTGT+AGG + chr1_4:1332723-1332742 Msa0142430:intron 25.0%
! AATGATGCAATAAAGTGAAT+AGG - chr1_4:1332893-1332912 None:intergenic 25.0%
! AAATTTGACCTATCATATTG+TGG + chr1_4:1333017-1333036 Msa0142430:intron 25.0%
! AATTTGACCTATCATATTGT+GGG + chr1_4:1333018-1333037 Msa0142430:intron 25.0%
!!! GTTAGTTTTCTTGTAATTAG+GGG + chr1_4:1333160-1333179 Msa0142430:intron 25.0%
!! TCCTAAAATCTGATCATTTT+GGG - chr1_4:1333278-1333297 None:intergenic 25.0%
! ACACAAAAAAAGTCTTTATC+AGG + chr1_4:1333297-1333316 Msa0142430:intron 25.0%
!!! TGAAGGCATTAATATGAAAT+AGG + chr1_4:1333587-1333606 Msa0142430:intron 25.0%
!! GAAGTCTTCTAAAAAAAAGT+AGG + chr1_4:1333626-1333645 Msa0142430:intron 25.0%
!!! GCTTTTTTGAAAGTATGATA+CGG - chr1_4:1333660-1333679 None:intergenic 25.0%
! ATCAGTCATATTCTATTTGT+AGG - chr1_4:1333693-1333712 None:intergenic 25.0%
! AATAGAATATGACTGATAAC+AGG + chr1_4:1333696-1333715 Msa0142430:intron 25.0%
! AAGACACAAATTTGAAAGTT+TGG - chr1_4:1334067-1334086 None:intergenic 25.0%
! AAAAGATCACATGATGTATT+TGG + chr1_4:1334295-1334314 Msa0142430:intron 25.0%
!! TTTTGCAGTTTATATAGATC+TGG + chr1_4:1334344-1334363 Msa0142430:intron 25.0%
! ATAGTGAAGATAATCAAGTT+AGG + chr1_4:1334848-1334867 Msa0142430:CDS 25.0%
! TAGTGAAGATAATCAAGTTA+GGG + chr1_4:1334849-1334868 Msa0142430:CDS 25.0%
!! AATTTCAAGTGCTATTACAA+AGG + chr1_4:1334957-1334976 Msa0142430:CDS 25.0%
! AGGACATTTCTATGAATAAA+AGG + chr1_4:1335227-1335246 Msa0142430:three_prime_UTR 25.0%
! GGACATTTCTATGAATAAAA+GGG + chr1_4:1335228-1335247 Msa0142430:three_prime_UTR 25.0%
! TTACATGATAAAGAAACTAG+AGG - chr1_4:1335335-1335354 None:intergenic 25.0%
AATACGTTAAAGCTCTCAAA+TGG + chr1_4:1324407-1324426 Msa0142430:CDS 30.0%
CATACTGACCTGAAAAATTA+GGG - chr1_4:1324542-1324561 None:intergenic 30.0%
TCATACTGACCTGAAAAATT+AGG - chr1_4:1324543-1324562 None:intergenic 30.0%
AACGAAGACTTATTATTTGG+CGG - chr1_4:1324820-1324839 None:intergenic 30.0%
TAACATTGGTATGCTTGAAA+TGG + chr1_4:1324867-1324886 Msa0142430:CDS 30.0%
AGTAGGTTACATCACAATTT+AGG + chr1_4:1324982-1325001 Msa0142430:CDS 30.0%
GTAGGTTACATCACAATTTA+GGG + chr1_4:1324983-1325002 Msa0142430:CDS 30.0%
CAATTTAGGGAATGTGTATA+TGG + chr1_4:1324996-1325015 Msa0142430:CDS 30.0%
CATAAAATTGGACATTGTCA+AGG + chr1_4:1325075-1325094 Msa0142430:CDS 30.0%
TAAAATTGGACATTGTCAAG+GGG + chr1_4:1325077-1325096 Msa0142430:CDS 30.0%
! GCTAAAGGGTATATTAATCT+TGG + chr1_4:1325102-1325121 Msa0142430:CDS 30.0%
!! TCTATGTACAAGTATTGATG+AGG + chr1_4:1325526-1325545 Msa0142430:intron 30.0%
!! AGCACAAGTGTTGAAAATTA+TGG - chr1_4:1325556-1325575 None:intergenic 30.0%
ATTAAAAAAGGGAGAAAGGT+TGG - chr1_4:1325612-1325631 None:intergenic 30.0%
AAGGATTAAAAAAGGGAGAA+AGG - chr1_4:1325616-1325635 None:intergenic 30.0%
!!! CTTTTTGTTTTGGTCAAAGT+TGG + chr1_4:1325880-1325899 Msa0142430:intron 30.0%
TGAAGGAAAACTACAAGTTA+GGG - chr1_4:1326432-1326451 None:intergenic 30.0%
AATTCAACAAGGCAATCAAA+TGG + chr1_4:1326680-1326699 Msa0142430:CDS 30.0%
TCAAATGGTATGAAAAGAGT+TGG + chr1_4:1326695-1326714 Msa0142430:CDS 30.0%
CATGCATGTTAGATATAACA+TGG - chr1_4:1327130-1327149 None:intergenic 30.0%
CATGTTATATCTAACATGCA+TGG + chr1_4:1327128-1327147 Msa0142430:intron 30.0%
ATGTCAAGTCTATTCTTCTT+AGG + chr1_4:1327195-1327214 Msa0142430:intron 30.0%
! GCACTGGTGAAAATTAATAT+TGG + chr1_4:1327339-1327358 Msa0142430:CDS 30.0%
! TTTTGGATTCTACTCACAAT+TGG + chr1_4:1327367-1327386 Msa0142430:CDS 30.0%
TAAATTCAGCTACTTAGACT+TGG - chr1_4:1327534-1327553 None:intergenic 30.0%
TACGGGTAAAGCAAATTATA+TGG - chr1_4:1327563-1327582 None:intergenic 30.0%
! CGTATACTTTTGATACAACT+TGG + chr1_4:1327579-1327598 Msa0142430:intron 30.0%
TGATTATACTCCTTGCATAT+TGG + chr1_4:1327685-1327704 Msa0142430:intron 30.0%
GTTTCCATTATCATATTCAC+GGG + chr1_4:1328131-1328150 Msa0142430:intron 30.0%
GATGATTGTATGTCAAATAG+TGG + chr1_4:1328314-1328333 Msa0142430:CDS 30.0%
TTTGGAAAGCAAAAATCATC+TGG - chr1_4:1328341-1328360 None:intergenic 30.0%
TCAATGTATCAGTCTATCAA+AGG + chr1_4:1328428-1328447 Msa0142430:CDS 30.0%
TAGAAAAATTACAGGTCACA+AGG + chr1_4:1328457-1328476 Msa0142430:CDS 30.0%
!!! TTTAGTTTTGTCAGACTTCT+GGG - chr1_4:1328521-1328540 None:intergenic 30.0%
!!! TTTTAGTTTTGTCAGACTTC+TGG - chr1_4:1328522-1328541 None:intergenic 30.0%
CATCATCAGAAAGAATTACA+CGG - chr1_4:1328580-1328599 None:intergenic 30.0%
TAATTAGGCAAGTCTTCTAA+CGG - chr1_4:1328650-1328669 None:intergenic 30.0%
! AATGTTATATGGGAGTCTTT+TGG - chr1_4:1328713-1328732 None:intergenic 30.0%
AATCAGTCCTAGTAAAATTC+AGG + chr1_4:1328776-1328795 Msa0142430:CDS 30.0%
GAAAGTAGTAGTTCTTTCAA+AGG + chr1_4:1328923-1328942 Msa0142430:CDS 30.0%
!! TGAGTTCTACTTTTATGACT+TGG + chr1_4:1329110-1329129 Msa0142430:intron 30.0%
TGAACATATGAGTTTGGAAA+AGG - chr1_4:1329160-1329179 None:intergenic 30.0%
! ATGGATATTTTTCTAACCTC+AGG + chr1_4:1329192-1329211 Msa0142430:intron 30.0%
GCAAATAGAGAATATAAAGG+AGG - chr1_4:1329218-1329237 None:intergenic 30.0%
TAAAACTGCAACTTATTGAC+TGG - chr1_4:1329442-1329461 None:intergenic 30.0%
TGAGTAAATGTAACAGAAGA+TGG - chr1_4:1329474-1329493 None:intergenic 30.0%
AGAAAAAAATGGTGAACTGA+AGG - chr1_4:1329544-1329563 None:intergenic 30.0%
GCTTACATAAATTTGTGAGT+AGG + chr1_4:1329584-1329603 Msa0142430:intron 30.0%
CACTTTATGTGCTGAATAAT+GGG - chr1_4:1329617-1329636 None:intergenic 30.0%
ACACTTTATGTGCTGAATAA+TGG - chr1_4:1329618-1329637 None:intergenic 30.0%
AAAAGGAGATAAAAAGGACA+TGG - chr1_4:1329785-1329804 None:intergenic 30.0%
! TTTTGTAAATGACAGCAAAC+AGG + chr1_4:1329909-1329928 Msa0142430:intron 30.0%
ATTATTAGGAACCCAGATAA+AGG + chr1_4:1330008-1330027 Msa0142430:intron 30.0%
GAAACTCAAATCCTTTATCT+GGG - chr1_4:1330022-1330041 None:intergenic 30.0%
TGAAACTCAAATCCTTTATC+TGG - chr1_4:1330023-1330042 None:intergenic 30.0%
TTTACAATTTACAGGTGAGA+AGG + chr1_4:1330419-1330438 Msa0142430:intron 30.0%
!!! ATTTTGGCTTTGTTGTAAAC+AGG + chr1_4:1330538-1330557 Msa0142430:intron 30.0%
! TGATGATGAAATCATTGCAT+CGG + chr1_4:1330565-1330584 Msa0142430:CDS 30.0%
AGCATGATTAAAGACAAGAT+GGG - chr1_4:1330757-1330776 None:intergenic 30.0%
AAGCATGATTAAAGACAAGA+TGG - chr1_4:1330758-1330777 None:intergenic 30.0%
TTTAATCATGCTTCTTCAAG+AGG + chr1_4:1330765-1330784 Msa0142430:intron 30.0%
GGACTTATTATCAGATTTAC+TGG - chr1_4:1330828-1330847 None:intergenic 30.0%
TAAGGAATACTAGGATTCTA+GGG + chr1_4:1330868-1330887 Msa0142430:intron 30.0%
! GGACTTTAGGAATATTATGA+CGG + chr1_4:1331159-1331178 Msa0142430:intron 30.0%
! AACTTTCTAAAGGGATTCAA+TGG - chr1_4:1331257-1331276 None:intergenic 30.0%
! TGAATCCCTTTAGAAAGTTA+TGG + chr1_4:1331258-1331277 Msa0142430:intron 30.0%
TTCACTTATTCACCAACAAA+AGG - chr1_4:1331294-1331313 None:intergenic 30.0%
!! TATTTTAGGAAATGGGACAA+TGG + chr1_4:1331406-1331425 Msa0142430:intron 30.0%
GATTTGCATTGTAATCGATT+TGG + chr1_4:1331485-1331504 Msa0142430:CDS 30.0%
ATACCTGAAACAAAGTTGTT+GGG - chr1_4:1331511-1331530 None:intergenic 30.0%
TATACCTGAAACAAAGTTGT+TGG - chr1_4:1331512-1331531 None:intergenic 30.0%
AACATAAAAAAGGTTGCATG+TGG - chr1_4:1331540-1331559 None:intergenic 30.0%
TAACAGGCACAACATAAAAA+AGG - chr1_4:1331550-1331569 None:intergenic 30.0%
!!! TTTTTTATGTTGTGCCTGTT+AGG + chr1_4:1331549-1331568 Msa0142430:intron 30.0%
TCATTTGTACACATGCAAAA+GGG - chr1_4:1331591-1331610 None:intergenic 30.0%
TTCATTTGTACACATGCAAA+AGG - chr1_4:1331592-1331611 None:intergenic 30.0%
TTCTGTTATTATTCCTGCAA+GGG - chr1_4:1331674-1331693 None:intergenic 30.0%
CAGAATTGTAAAAAAGAGAG+GGG - chr1_4:1331744-1331763 None:intergenic 30.0%
CCAGAATTGTAAAAAAGAGA+GGG - chr1_4:1331745-1331764 None:intergenic 30.0%
ACCAGAATTGTAAAAAAGAG+AGG - chr1_4:1331746-1331765 None:intergenic 30.0%
ATATTAGAAACATGGCACAA+GGG - chr1_4:1331806-1331825 None:intergenic 30.0%
AATATTAGAAACATGGCACA+AGG - chr1_4:1331807-1331826 None:intergenic 30.0%
! TTACTTCATTTTGCATGACT+AGG + chr1_4:1331939-1331958 Msa0142430:intron 30.0%
! ATTGCTATTATTATCTCCCA+AGG + chr1_4:1332170-1332189 Msa0142430:intron 30.0%
! TTGCTATTATTATCTCCCAA+GGG + chr1_4:1332171-1332190 Msa0142430:intron 30.0%
AGAGCAATGTATACTTAAAC+GGG - chr1_4:1332224-1332243 None:intergenic 30.0%
GAGAGCAATGTATACTTAAA+CGG - chr1_4:1332225-1332244 None:intergenic 30.0%
!! TTTAAGTTTTGGTGCACTTA+TGG + chr1_4:1332276-1332295 Msa0142430:intron 30.0%
!!! TGCATCAGCAATTTTTTGAA+TGG - chr1_4:1332437-1332456 None:intergenic 30.0%
TCAAAAAATTGCTGATGCAT+TGG + chr1_4:1332438-1332457 Msa0142430:CDS 30.0%
GATTTATCGTACCTATACAA+AGG - chr1_4:1332486-1332505 None:intergenic 30.0%
! ATTTTCAATACCCTGATACT+AGG + chr1_4:1332511-1332530 Msa0142430:intron 30.0%
! TTTTCAATACCCTGATACTA+GGG + chr1_4:1332512-1332531 Msa0142430:intron 30.0%
! TAGGGATCTTTCTTGTTTAA+TGG + chr1_4:1332530-1332549 Msa0142430:intron 30.0%
! AGGGATCTTTCTTGTTTAAT+GGG + chr1_4:1332531-1332550 Msa0142430:intron 30.0%
!!! CCTTTTTAAAGTAGAAAGCT+TGG - chr1_4:1332619-1332638 None:intergenic 30.0%
! CCAAGCTTTCTACTTTAAAA+AGG + chr1_4:1332616-1332635 Msa0142430:CDS 30.0%
!! TTTTCTGAGTTGAATATGAG+TGG + chr1_4:1332746-1332765 Msa0142430:CDS 30.0%
! AATATGAGTGGTCTAAAACT+AGG + chr1_4:1332758-1332777 Msa0142430:CDS 30.0%
TATTAGTCCTGATAAAGTCA+AGG - chr1_4:1332822-1332841 None:intergenic 30.0%
ACTTTATCAGGACTAATACT+TGG + chr1_4:1332824-1332843 Msa0142430:CDS 30.0%
!!! CAATGGTTCTGTTACTTTTA+TGG - chr1_4:1332973-1332992 None:intergenic 30.0%
! GTCCTAAAATCTGATCATTT+TGG - chr1_4:1333279-1333298 None:intergenic 30.0%
AAAAAAAGTCTTTATCAGGC+TGG + chr1_4:1333301-1333320 Msa0142430:intron 30.0%
GTCTATTCAAAAGATATGTC+AGG + chr1_4:1333555-1333574 Msa0142430:intron 30.0%
ATGTCAGGTTACTTATTTGA+AGG + chr1_4:1333570-1333589 Msa0142430:intron 30.0%
TATGAAATAGGTCTTCAAGT+AGG + chr1_4:1333599-1333618 Msa0142430:intron 30.0%
ATGAAATAGGTCTTCAAGTA+GGG + chr1_4:1333600-1333619 Msa0142430:intron 30.0%
! TTTTTGTGTATTGCTGTAAG+TGG + chr1_4:1333806-1333825 Msa0142430:intron 30.0%
GAATTTGGCCTAAATTGTAA+GGG - chr1_4:1333847-1333866 None:intergenic 30.0%
TGAATTTGGCCTAAATTGTA+AGG - chr1_4:1333848-1333867 None:intergenic 30.0%
GTTTGATGTTTGTAACAAGT+TGG + chr1_4:1333884-1333903 Msa0142430:intron 30.0%
TCACATATTCTTCTTCATGT+AGG - chr1_4:1334026-1334045 None:intergenic 30.0%
ATGAAGAAGAATATGTGATG+AGG + chr1_4:1334028-1334047 Msa0142430:intron 30.0%
ATGATTGCTCTACATATCTT+GGG - chr1_4:1334108-1334127 None:intergenic 30.0%
TATGATTGCTCTACATATCT+TGG - chr1_4:1334109-1334128 None:intergenic 30.0%
AAGATATGTAGAGCAATCAT+AGG + chr1_4:1334108-1334127 Msa0142430:intron 30.0%
AGATATGTAGAGCAATCATA+GGG + chr1_4:1334109-1334128 Msa0142430:intron 30.0%
TAAACTGCAAAATAAGGCAA+AGG - chr1_4:1334336-1334355 None:intergenic 30.0%
ATCACAATTATCAGTAAAGC+AGG - chr1_4:1334381-1334400 None:intergenic 30.0%
TCCTTAAGAAATGTCAACTT+GGG + chr1_4:1334511-1334530 Msa0142430:CDS 30.0%
TATTGCCATTGTAATTCCTA+GGG + chr1_4:1334611-1334630 Msa0142430:intron 30.0%
AAAGAGAATAACATAACCCT+AGG - chr1_4:1334630-1334649 None:intergenic 30.0%
TGCTGATAATTCTGTTTCAA+CGG + chr1_4:1334684-1334703 Msa0142430:CDS 30.0%
GAAACTTGATACTATGAAAG+TGG + chr1_4:1334765-1334784 Msa0142430:CDS 30.0%
TGAATTTCTTTGACATGAAC+TGG - chr1_4:1334911-1334930 None:intergenic 30.0%
!! TTGAAATTTGCTGAGTGAAA+TGG - chr1_4:1334945-1334964 None:intergenic 30.0%
CATTATCCATTTCTCAACAA+AGG + chr1_4:1335101-1335120 Msa0142430:CDS 30.0%
! TCTTTTCCTTTGTTGAGAAA+TGG - chr1_4:1335110-1335129 None:intergenic 30.0%
AATCAAACTTTCTTACAGCA+AGG - chr1_4:1335150-1335169 None:intergenic 30.0%
CATTTCTATGAATAAAAGGG+TGG + chr1_4:1335231-1335250 Msa0142430:three_prime_UTR 30.0%
! AACATCAATTGTAACTTGCA+AGG + chr1_4:1335299-1335318 Msa0142430:three_prime_UTR 30.0%
GCGAAACTTCATAATCGATT+CGG - chr1_4:1324435-1324454 None:intergenic 35.0%
AGTTTCGCTGAAGTTCTTAT+CGG + chr1_4:1324447-1324466 Msa0142430:CDS 35.0%
AGAAACATCTAGATCTAGCA+AGG + chr1_4:1324635-1324654 Msa0142430:CDS 35.0%
GAAACATCTAGATCTAGCAA+GGG + chr1_4:1324636-1324655 Msa0142430:CDS 35.0%
AGATTAGCGAGTATGATGAT+GGG + chr1_4:1324956-1324975 Msa0142430:CDS 35.0%
GGAATGTGTATATGGAATTG+AGG + chr1_4:1325004-1325023 Msa0142430:CDS 35.0%
TGTATATGGAATTGAGGAAG+TGG + chr1_4:1325010-1325029 Msa0142430:CDS 35.0%
ACGCTATGAAGAATATGAAG+AGG + chr1_4:1325037-1325056 Msa0142430:CDS 35.0%
CGCTATGAAGAATATGAAGA+GGG + chr1_4:1325038-1325057 Msa0142430:CDS 35.0%
AGCTGCGAAGGATTAAAAAA+GGG - chr1_4:1325623-1325642 None:intergenic 35.0%
ATTGTCCCAACTTTACAAGT+TGG + chr1_4:1325748-1325767 Msa0142430:intron 35.0%
TTGAAAACTAGCAATTGCCA+TGG + chr1_4:1325853-1325872 Msa0142430:intron 35.0%
CCAAAACAAAAAGATAGCCA+TGG - chr1_4:1325873-1325892 None:intergenic 35.0%
!! CCATGGCTATCTTTTTGTTT+TGG + chr1_4:1325870-1325889 Msa0142430:intron 35.0%
! ACTTTCTAATTTTGCCGTTG+CGG + chr1_4:1325907-1325926 Msa0142430:intron 35.0%
AGGTTGAAAATGAGCATACT+TGG - chr1_4:1325992-1326011 None:intergenic 35.0%
! CTGGCTTGATGTATTAATGT+TGG + chr1_4:1326157-1326176 Msa0142430:intron 35.0%
CAACCATGATAACCTATTTC+TGG - chr1_4:1326377-1326396 None:intergenic 35.0%
GTGAAGGAAAACTACAAGTT+AGG - chr1_4:1326433-1326452 None:intergenic 35.0%
AAACACCTCATAGCTTCAAA+AGG - chr1_4:1326503-1326522 None:intergenic 35.0%
TCAGTATTGTGAATTTGCGA+AGG + chr1_4:1326567-1326586 Msa0142430:intron 35.0%
! TGTTGAATTTTCTGAGCTTC+TGG - chr1_4:1326669-1326688 None:intergenic 35.0%
GAAGCTCAGAAAATTCAACA+AGG + chr1_4:1326669-1326688 Msa0142430:CDS 35.0%
CAAAACAATTGGCAACTTAG+AGG + chr1_4:1326726-1326745 Msa0142430:CDS 35.0%
GAGTTATACAGCAATCCAAA+TGG + chr1_4:1326992-1327011 Msa0142430:intron 35.0%
GTCAAAGGTTATACTCCATT+TGG - chr1_4:1327010-1327029 None:intergenic 35.0%
CTGCTTAATTTCTGTGTCAA+AGG - chr1_4:1327025-1327044 None:intergenic 35.0%
CTTTGACACAGAAATTAAGC+AGG + chr1_4:1327023-1327042 Msa0142430:intron 35.0%
! TGCTGGTAATGATTGCTTAT+AGG + chr1_4:1327311-1327330 Msa0142430:intron 35.0%
! GCTGGTAATGATTGCTTATA+GGG + chr1_4:1327312-1327331 Msa0142430:intron 35.0%
! CTGGTAATGATTGCTTATAG+GGG + chr1_4:1327313-1327332 Msa0142430:intron 35.0%
! ATGCTAGCAATTTTCTTCCA+TGG - chr1_4:1327646-1327665 None:intergenic 35.0%
GGAAGAAAATTGCTAGCATA+AGG + chr1_4:1327647-1327666 Msa0142430:intron 35.0%
GAATGAGTCACATAAGCAAT+AGG - chr1_4:1327849-1327868 None:intergenic 35.0%
TAGTTGCTTAACAAACTTGG+TGG + chr1_4:1327876-1327895 Msa0142430:intron 35.0%
! GCTATAATGCATGTTTTCCA+AGG - chr1_4:1328003-1328022 None:intergenic 35.0%
! CTTTTAATGAATCAGCTACC+TGG - chr1_4:1328057-1328076 None:intergenic 35.0%
AATATCACAGGTCCAGAAAA+AGG - chr1_4:1328158-1328177 None:intergenic 35.0%
! CAGTTGTGATATTTTACAGG+AGG + chr1_4:1328195-1328214 Msa0142430:intron 35.0%
GAAGTCAAATGAAGAGATAG+AGG + chr1_4:1328244-1328263 Msa0142430:CDS 35.0%
TCATCATCCAATTCATCTTC+AGG - chr1_4:1328392-1328411 None:intergenic 35.0%
GACTGATACATTGACATAAG+AGG - chr1_4:1328422-1328441 None:intergenic 35.0%
GGCTCATCTAGAAAAATTAC+AGG + chr1_4:1328449-1328468 Msa0142430:CDS 35.0%
! AATTCTTTCTGATGATGACG+AGG + chr1_4:1328583-1328602 Msa0142430:CDS 35.0%
AATTAGGCAAGTCTTCTAAC+GGG - chr1_4:1328649-1328668 None:intergenic 35.0%
!! GAAGTTTTAGTGCCTGTATT+TGG - chr1_4:1328956-1328975 None:intergenic 35.0%
TTAGAACCACTAGGAAAGTA+AGG - chr1_4:1329019-1329038 None:intergenic 35.0%
AGTAGAACTCACATCATGTA+GGG - chr1_4:1329101-1329120 None:intergenic 35.0%
AAGTAGAACTCACATCATGT+AGG - chr1_4:1329102-1329121 None:intergenic 35.0%
AAGGCATGAATCTCATACAT+AGG - chr1_4:1329141-1329160 None:intergenic 35.0%
TGCAGAGATATATTGCATGT+CGG + chr1_4:1329235-1329254 Msa0142430:intron 35.0%
AGATATATTGCATGTCGGAT+TGG + chr1_4:1329240-1329259 Msa0142430:CDS 35.0%
GATATATTGCATGTCGGATT+GGG + chr1_4:1329241-1329260 Msa0142430:CDS 35.0%
ATATATTGCATGTCGGATTG+GGG + chr1_4:1329242-1329261 Msa0142430:CDS 35.0%
!! GTTTGACATTGACTCGTTAA+AGG + chr1_4:1329311-1329330 Msa0142430:CDS 35.0%
GTAAATGTAACAGAAGATGG+CGG - chr1_4:1329471-1329490 None:intergenic 35.0%
CTTCTGTTACATTTACTCAG+TGG + chr1_4:1329475-1329494 Msa0142430:intron 35.0%
TATGTAAGCCAAGTGAACAA+GGG - chr1_4:1329573-1329592 None:intergenic 35.0%
TTATGTAAGCCAAGTGAACA+AGG - chr1_4:1329574-1329593 None:intergenic 35.0%
ATGGTTGAAGCTTTCATTGA+TGG + chr1_4:1329701-1329720 Msa0142430:CDS 35.0%
TAGAGATCCAAATACTTACG+TGG - chr1_4:1329832-1329851 None:intergenic 35.0%
TTGGATCTCTAAACTAGTTG+AGG + chr1_4:1329841-1329860 Msa0142430:intron 35.0%
TTTGAAAATCACGCAGTCAT+AGG + chr1_4:1329961-1329980 Msa0142430:intron 35.0%
GGATGAAGAACTTTCTCTAT+GGG - chr1_4:1330122-1330141 None:intergenic 35.0%
TGGATGAAGAACTTTCTCTA+TGG - chr1_4:1330123-1330142 None:intergenic 35.0%
TAGAGAAAGTTCTTCATCCA+AGG + chr1_4:1330123-1330142 Msa0142430:intron 35.0%
AGAGAAAGTTCTTCATCCAA+GGG + chr1_4:1330124-1330143 Msa0142430:intron 35.0%
GTGGTAAAAAGATAAACCCT+TGG - chr1_4:1330143-1330162 None:intergenic 35.0%
!!! ATGCTTTTTAGAATGGGCAA+AGG - chr1_4:1330170-1330189 None:intergenic 35.0%
!!! CACAGGATGCTTTTTAGAAT+GGG - chr1_4:1330176-1330195 None:intergenic 35.0%
TCTATCAAGCAGTTAGGTAA+AGG - chr1_4:1330199-1330218 None:intergenic 35.0%
TTGGAATCTATCAAGCAGTT+AGG - chr1_4:1330205-1330224 None:intergenic 35.0%
TCCAACTGCAGCTAAATAAT+CGG + chr1_4:1330220-1330239 Msa0142430:intron 35.0%
GGAATGGGATCATAATTAGA+AGG - chr1_4:1330254-1330273 None:intergenic 35.0%
CCAGAAGAATAAATGGGAAT+GGG - chr1_4:1330269-1330288 None:intergenic 35.0%
CCATTCCCATTTATTCTTCT+GGG + chr1_4:1330267-1330286 Msa0142430:intron 35.0%
!! ATGGTGTTATGGACAAATCT+TGG - chr1_4:1330601-1330620 None:intergenic 35.0%
GACATCTCTCACAATTGTTT+AGG + chr1_4:1330662-1330681 Msa0142430:CDS 35.0%
GTAAGGAATACTAGGATTCT+AGG + chr1_4:1330867-1330886 Msa0142430:intron 35.0%
AGGCTATAAATACCACTCTT+GGG - chr1_4:1330928-1330947 None:intergenic 35.0%
AAGGCTATAAATACCACTCT+TGG - chr1_4:1330929-1330948 None:intergenic 35.0%
TGGTATTTATAGCCTTCCAT+GGG + chr1_4:1330933-1330952 Msa0142430:intron 35.0%
! TTTCTAGAAGCTCAATGAGT+CGG + chr1_4:1331023-1331042 Msa0142430:intron 35.0%
! GGTCTTAAACCTCTAAAAGA+GGG + chr1_4:1331110-1331129 Msa0142430:intron 35.0%
CATAATATTCCTAAAGTCCC+AGG - chr1_4:1331158-1331177 None:intergenic 35.0%
! ATCCCTTTAGAAAGTTATGG+CGG + chr1_4:1331261-1331280 Msa0142430:intron 35.0%
TATTCACCAACAAAAGGACT+TGG - chr1_4:1331288-1331307 None:intergenic 35.0%
TTCAGTGAAAGGCAAAAACA+AGG - chr1_4:1331382-1331401 None:intergenic 35.0%
ACAACATCAGGTCAATCTTA+CGG + chr1_4:1331449-1331468 Msa0142430:CDS 35.0%
CATTTGTACACATGCAAAAG+GGG - chr1_4:1331590-1331609 None:intergenic 35.0%
GTTCTGTTATTATTCCTGCA+AGG - chr1_4:1331675-1331694 None:intergenic 35.0%
!!! CCCTCTCTTTTTTACAATTC+TGG + chr1_4:1331742-1331761 Msa0142430:intron 35.0%
GGAAGATAAAGACACTGATA+GGG - chr1_4:1331784-1331803 None:intergenic 35.0%
TATTAGAAACATGGCACAAG+GGG - chr1_4:1331805-1331824 None:intergenic 35.0%
GTTCTTGTTCCATGAGAATT+AGG + chr1_4:1331828-1331847 Msa0142430:intron 35.0%
TTGTTCCATGAGAATTAGGT+TGG + chr1_4:1331832-1331851 Msa0142430:intron 35.0%
AACAATAGCAAATTGGGGAT+GGG - chr1_4:1331981-1332000 None:intergenic 35.0%
!! TACTTAAACGGGTTAAGAGA+AGG - chr1_4:1332213-1332232 None:intergenic 35.0%
GTACTTTCACACCTTTGTAT+AGG + chr1_4:1332472-1332491 Msa0142430:CDS 35.0%
AAGAAAGATCCCTAGTATCA+GGG - chr1_4:1332524-1332543 None:intergenic 35.0%
TAAAGATGCGATGTAAGAGA+TGG - chr1_4:1332668-1332687 None:intergenic 35.0%
TTATCAGGACTAATACTTGG+AGG + chr1_4:1332827-1332846 Msa0142430:CDS 35.0%
CAATAAAGTGAATAGGTGGT+AGG - chr1_4:1332886-1332905 None:intergenic 35.0%
GATGCAATAAAGTGAATAGG+TGG - chr1_4:1332890-1332909 None:intergenic 35.0%
CATGCTTACATCATGTATTG+AGG + chr1_4:1332927-1332946 Msa0142430:intron 35.0%
TAACAGAACCATTGCTCAAA+GGG + chr1_4:1332979-1332998 Msa0142430:intron 35.0%
ATGTTAGCCCACAATATGAT+AGG - chr1_4:1333028-1333047 None:intergenic 35.0%
AGGAAATCCTATAATGCTTG+AGG + chr1_4:1333109-1333128 Msa0142430:intron 35.0%
GAACAAACCTCAAGCATTAT+AGG - chr1_4:1333119-1333138 None:intergenic 35.0%
! GTTTTCTTGTAATTAGGGGT+TGG + chr1_4:1333164-1333183 Msa0142430:intron 35.0%
TTGTAATTAGGGGTTGGAAA+AGG + chr1_4:1333170-1333189 Msa0142430:intron 35.0%
! GCCCAAAATGATCAGATTTT+AGG + chr1_4:1333274-1333293 Msa0142430:intron 35.0%
CATATTCTATTTGTAGGCCT+GGG - chr1_4:1333687-1333706 None:intergenic 35.0%
TCATATTCTATTTGTAGGCC+TGG - chr1_4:1333688-1333707 None:intergenic 35.0%
TTTAGGCCAAATTCATCATG+CGG + chr1_4:1333853-1333872 Msa0142430:intron 35.0%
AAAAGACCGCATGATGAATT+TGG - chr1_4:1333862-1333881 None:intergenic 35.0%
CTTCATGTAGGTCAATCATA+GGG - chr1_4:1334014-1334033 None:intergenic 35.0%
TCTTCATGTAGGTCAATCAT+AGG - chr1_4:1334015-1334034 None:intergenic 35.0%
ATGTTTGTACACCTTACGAT+GGG + chr1_4:1334136-1334155 Msa0142430:intron 35.0%
TGTATGTTTATCCCATCGTA+AGG - chr1_4:1334150-1334169 None:intergenic 35.0%
ACATACAATTCAAACACACC+CGG + chr1_4:1334163-1334182 Msa0142430:intron 35.0%
CTTGTTGCAAAAAACACTTC+AGG + chr1_4:1334246-1334265 Msa0142430:intron 35.0%
! ACAATGCTGTCTCAAAGTTT+TGG + chr1_4:1334488-1334507 Msa0142430:CDS 35.0%
GTCCTTAAGAAATGTCAACT+TGG + chr1_4:1334510-1334529 Msa0142430:CDS 35.0%
TGGAGTTGTTCACATAATTG+AGG + chr1_4:1334539-1334558 Msa0142430:CDS 35.0%
CTATTGCCATTGTAATTCCT+AGG + chr1_4:1334610-1334629 Msa0142430:intron 35.0%
CATAACCCTAGGAATTACAA+TGG - chr1_4:1334619-1334638 None:intergenic 35.0%
GAAAGTGGATGATAATCAAG+AGG + chr1_4:1334780-1334799 Msa0142430:CDS 35.0%
AAATACTTTAGACGATCAGC+TGG + chr1_4:1334816-1334835 Msa0142430:CDS 35.0%
! CTGTAAGAAAGTTTGATTCG+TGG + chr1_4:1335152-1335171 Msa0142430:exon 35.0%
AAGAATAAGAGGCAATTCTC+TGG + chr1_4:1335198-1335217 Msa0142430:three_prime_UTR 35.0%
CGTTAACTAAGTGTACATCT+TGG + chr1_4:1335359-1335378 Msa0142430:three_prime_UTR 35.0%
AAGTGGTGAATCTCTCTGAA+AGG - chr1_4:1324225-1324244 None:intergenic 40.0%
!! TGGGTTTTGTGAAGTGAAAG+TGG - chr1_4:1324242-1324261 None:intergenic 40.0%
CATCGGAAAATTGCTCAAGA+CGG - chr1_4:1324519-1324538 None:intergenic 40.0%
! TTCCGATGCCCTAATTTTTC+AGG + chr1_4:1324531-1324550 Msa0142430:CDS 40.0%
GACCTGAAAAATTAGGGCAT+CGG - chr1_4:1324536-1324555 None:intergenic 40.0%
CGGATTCTCTTTCAGACTAA+CGG - chr1_4:1324800-1324819 None:intergenic 40.0%
CAATCCTCTCCTGAGTATAT+TGG - chr1_4:1324917-1324936 None:intergenic 40.0%
ATTGAAGATTTGCGACGAAG+AGG + chr1_4:1324933-1324952 Msa0142430:CDS 40.0%
GAGATTAGCGAGTATGATGA+TGG + chr1_4:1324955-1324974 Msa0142430:CDS 40.0%
ATTGTCAAGGGGAAGCTAAA+GGG + chr1_4:1325088-1325107 Msa0142430:CDS 40.0%
!! TCTTATTATGAGAAGGCGCT+TGG + chr1_4:1325165-1325184 Msa0142430:CDS 40.0%
TTTAGAGGATGAGGATGCTT+TGG + chr1_4:1325200-1325219 Msa0142430:CDS 40.0%
AAGTATCTGCTGCAGGAAAA+CGG + chr1_4:1325357-1325376 Msa0142430:CDS 40.0%
TCATCCTTGCTTTCTCAACA+AGG - chr1_4:1325395-1325414 None:intergenic 40.0%
GAGCTGCGAAGGATTAAAAA+AGG - chr1_4:1325624-1325643 None:intergenic 40.0%
!! TCCCAACTTTACAAGTTGGT+TGG + chr1_4:1325752-1325771 Msa0142430:intron 40.0%
CCCAACCAACTTGTAAAGTT+GGG - chr1_4:1325756-1325775 None:intergenic 40.0%
!! CCCAACTTTACAAGTTGGTT+GGG + chr1_4:1325753-1325772 Msa0142430:intron 40.0%
! AACCTCAGAACTGTGTTTTC+TGG + chr1_4:1326007-1326026 Msa0142430:intron 40.0%
!!! AACTGTGTTTTCTGGAGTGT+TGG + chr1_4:1326015-1326034 Msa0142430:intron 40.0%
AGACAAAAGCTTAGCTGTCA+TGG + chr1_4:1326067-1326086 Msa0142430:intron 40.0%
ACCTGTGTATGGTTTAGTTG+TGG + chr1_4:1326198-1326217 Msa0142430:intron 40.0%
TCCACAACTAAACCATACAC+AGG - chr1_4:1326202-1326221 None:intergenic 40.0%
GCTCCAGAAATAGGTTATCA+TGG + chr1_4:1326371-1326390 Msa0142430:intron 40.0%
!!! AGAGTCCTTTTGAAGCTATG+AGG + chr1_4:1326495-1326514 Msa0142430:intron 40.0%
ATTGTGAATTTGCGAAGGAG+AGG + chr1_4:1326572-1326591 Msa0142430:CDS 40.0%
AAGGTTGGGTGATTCATATC+TGG + chr1_4:1326627-1326646 Msa0142430:CDS 40.0%
GGTGATTCATATCTGGATGT+CGG + chr1_4:1326634-1326653 Msa0142430:CDS 40.0%
AAGCATACAGATCAACCAAC+TGG - chr1_4:1327291-1327310 None:intergenic 40.0%
! AGAAGCGTGTGATGCATATA+AGG + chr1_4:1327392-1327411 Msa0142430:CDS 40.0%
ATGCATATAAGGAGAGCTAC+AGG + chr1_4:1327403-1327422 Msa0142430:CDS 40.0%
GCAGTTGTTCTGTAAAACCA+TGG + chr1_4:1327626-1327645 Msa0142430:intron 40.0%
CGTAAAGACACCAATATGCA+AGG - chr1_4:1327698-1327717 None:intergenic 40.0%
!! CATGATCAGATTTGATGACG+AGG + chr1_4:1328025-1328044 Msa0142430:CDS 40.0%
AGGACCCGTGAATATGATAA+TGG - chr1_4:1328138-1328157 None:intergenic 40.0%
! ATATTCACGGGTCCTTTTTC+TGG + chr1_4:1328143-1328162 Msa0142430:intron 40.0%
GTTTCAGAGCAACAATCATC+AGG - chr1_4:1328281-1328300 None:intergenic 40.0%
CAATTCATCTTCAGGAGTCA+GGG - chr1_4:1328384-1328403 None:intergenic 40.0%
TCATACCAACTCTACAAAGC+AGG + chr1_4:1328484-1328503 Msa0142430:CDS 40.0%
TCAGAGCATAGCAACTAACA+AGG - chr1_4:1328690-1328709 None:intergenic 40.0%
!! CTGTGGATGATTTGGGTTTT+GGG + chr1_4:1328851-1328870 Msa0142430:intron 40.0%
CACATTTAGATCCATACTCC+GGG - chr1_4:1328889-1328908 None:intergenic 40.0%
GCACATTTAGATCCATACTC+CGG - chr1_4:1328890-1328909 None:intergenic 40.0%
TATATCGTTGCTCAATGACC+TGG - chr1_4:1328987-1329006 None:intergenic 40.0%
! GTATCGCATTTAGAACCACT+AGG - chr1_4:1329028-1329047 None:intergenic 40.0%
AAATGCGATACAGATGTCTC+TGG + chr1_4:1329037-1329056 Msa0142430:CDS 40.0%
TGTAGGGAATGATGCATCAT+GGG - chr1_4:1329085-1329104 None:intergenic 40.0%
ATGTAGGGAATGATGCATCA+TGG - chr1_4:1329086-1329105 None:intergenic 40.0%
TCCAGCAGAAAAGAAATCAG+AGG + chr1_4:1329365-1329384 Msa0142430:CDS 40.0%
CCAGCAGAAAAGAAATCAGA+GGG + chr1_4:1329366-1329385 Msa0142430:CDS 40.0%
CAGAAAAGAAATCAGAGGGT+AGG + chr1_4:1329370-1329389 Msa0142430:intron 40.0%
ATTCAGCACATAAAGTGTGC+TGG + chr1_4:1329620-1329639 Msa0142430:CDS 40.0%
! GGAGCATCTGCAAAATAACA+TGG + chr1_4:1329682-1329701 Msa0142430:CDS 40.0%
TCCAAGACCACGTAAGTATT+TGG + chr1_4:1329822-1329841 Msa0142430:intron 40.0%
TCCAAATACTTACGTGGTCT+TGG - chr1_4:1329826-1329845 None:intergenic 40.0%
!! GCACAGGATGCTTTTTAGAA+TGG - chr1_4:1330177-1330196 None:intergenic 40.0%
ACCGATTATTTAGCTGCAGT+TGG - chr1_4:1330224-1330243 None:intergenic 40.0%
CCCATTCCCATTTATTCTTC+TGG + chr1_4:1330266-1330285 Msa0142430:intron 40.0%
CCCAGAAGAATAAATGGGAA+TGG - chr1_4:1330270-1330289 None:intergenic 40.0%
CAGGACCCAGAAGAATAAAT+GGG - chr1_4:1330275-1330294 None:intergenic 40.0%
ACAGGACCCAGAAGAATAAA+TGG - chr1_4:1330276-1330295 None:intergenic 40.0%
TTCTTCAGCACCTTGATCTT+TGG - chr1_4:1330397-1330416 None:intergenic 40.0%
TAGAGGAATTGGTATTCGCT+AGG - chr1_4:1330447-1330466 None:intergenic 40.0%
AGAAGTGGCAATAGAGGAAT+TGG - chr1_4:1330458-1330477 None:intergenic 40.0%
AGGCATATATGTCACAGAAG+TGG - chr1_4:1330473-1330492 None:intergenic 40.0%
GTGTTATGGACAAATCTTGG+AGG - chr1_4:1330598-1330617 None:intergenic 40.0%
! TGCATCGATCAATGGTGTTA+TGG - chr1_4:1330612-1330631 None:intergenic 40.0%
TTCAAGAGGAGTCACTCTAA+TGG + chr1_4:1330779-1330798 Msa0142430:intron 40.0%
TCCTGTACTTGCAAGAAGTA+CGG + chr1_4:1330845-1330864 Msa0142430:intron 40.0%
! TACTTGCAAGAAGTACGGTA+AGG + chr1_4:1330850-1330869 Msa0142430:intron 40.0%
GAAGTACGGTAAGGAATACT+AGG + chr1_4:1330859-1330878 Msa0142430:intron 40.0%
AGACTGATAATTCGATGCCT+TGG + chr1_4:1330895-1330914 Msa0142430:intron 40.0%
GACTGATAATTCGATGCCTT+GGG + chr1_4:1330896-1330915 Msa0142430:intron 40.0%
GTGGTATTTATAGCCTTCCA+TGG + chr1_4:1330932-1330951 Msa0142430:intron 40.0%
TTACTTGGTTTCCAAGCAAC+AGG + chr1_4:1330968-1330987 Msa0142430:intron 40.0%
TACTTGGTTTCCAAGCAACA+GGG + chr1_4:1330969-1330988 Msa0142430:intron 40.0%
! GGGTCTTAAACCTCTAAAAG+AGG + chr1_4:1331109-1331128 Msa0142430:intron 40.0%
! TAAACCTCTAAAAGAGGGTC+TGG + chr1_4:1331115-1331134 Msa0142430:intron 40.0%
! AAACCTCTAAAAGAGGGTCT+GGG + chr1_4:1331116-1331135 Msa0142430:intron 40.0%
AATATTCCTAAAGTCCCAGG+AGG - chr1_4:1331155-1331174 None:intergenic 40.0%
GACCGCCATAACTTTCTAAA+GGG - chr1_4:1331266-1331285 None:intergenic 40.0%
GACAATGGAGAAACTTCGAA+AGG + chr1_4:1331421-1331440 Msa0142430:CDS 40.0%
!! CGAAAGGTATTCACAACATC+AGG + chr1_4:1331437-1331456 Msa0142430:CDS 40.0%
CTGTCAATACAGTCGAGAAA+AGG + chr1_4:1331644-1331663 Msa0142430:intron 40.0%
GGGAAGATAAAGACACTGAT+AGG - chr1_4:1331785-1331804 None:intergenic 40.0%
ATTCGCCAACCTAATTCTCA+TGG - chr1_4:1331840-1331859 None:intergenic 40.0%
TGGGGATGGGTCAAATAAAA+CGG - chr1_4:1331968-1331987 None:intergenic 40.0%
CAACAATAGCAAATTGGGGA+TGG - chr1_4:1331982-1332001 None:intergenic 40.0%
! CTCGAAGTGCTTAACATTTC+TGG + chr1_4:1332052-1332071 Msa0142430:CDS 40.0%
ATCCACATGCATCAGTAAGA+CGG - chr1_4:1332081-1332100 None:intergenic 40.0%
AAGACAAATGATATCGGCAG+CGG - chr1_4:1332343-1332362 None:intergenic 40.0%
CAAGAAAGATCCCTAGTATC+AGG - chr1_4:1332525-1332544 None:intergenic 40.0%
ATGGGTAGTTTACCTTTGAC+AGG + chr1_4:1332549-1332568 Msa0142430:intron 40.0%
! GTATTGAGGCATTATTCTGC+AGG + chr1_4:1332941-1332960 Msa0142430:intron 40.0%
GTAACAGAACCATTGCTCAA+AGG + chr1_4:1332978-1332997 Msa0142430:intron 40.0%
GCATTATAGGATTTCCTTCC+AGG - chr1_4:1333106-1333125 None:intergenic 40.0%
CTTTCAAAAAAGCCAAACCC+AGG + chr1_4:1333667-1333686 Msa0142430:intron 40.0%
AAACCGAGTTAGACTTTGCA+AGG - chr1_4:1333733-1333752 None:intergenic 40.0%
! TCACAAGTAGTGGTGGAATT+AGG - chr1_4:1333758-1333777 None:intergenic 40.0%
CAAACATGCATCACAAGTAG+TGG - chr1_4:1333768-1333787 None:intergenic 40.0%
GCTGTAAGTGGCATAAAATC+TGG + chr1_4:1333818-1333837 Msa0142430:intron 40.0%
! TCTGGCTTCCCTTACAATTT+AGG + chr1_4:1333836-1333855 Msa0142430:intron 40.0%
CATGTTTGTACACCTTACGA+TGG + chr1_4:1334135-1334154 Msa0142430:intron 40.0%
! GCCCAAGTTGACATTTCTTA+AGG - chr1_4:1334515-1334534 None:intergenic 40.0%
TTTATCAGATAACAGCAGCC+TGG + chr1_4:1334648-1334667 Msa0142430:intron 40.0%
TAAAAGCTGTTCACAGAACC+AGG + chr1_4:1334738-1334757 Msa0142430:CDS 40.0%
TAGTATCAAGTTTCTGCTCC+TGG - chr1_4:1334759-1334778 None:intergenic 40.0%
!! GACGATGAACGGTGTTGTTT+GGG - chr1_4:1324261-1324280 None:intergenic 45.0%
CATCGAGAAACGACGATGAA+CGG - chr1_4:1324272-1324291 None:intergenic 45.0%
! GATGGACTCAGAGCTCAAAT+CGG + chr1_4:1324288-1324307 Msa0142430:exon 45.0%
AATCGGCGAAATCTGCTTAC+CGG + chr1_4:1324305-1324324 Msa0142430:CDS 45.0%
TACCTTCTTCTTTGGCGTTC+CGG - chr1_4:1324327-1324346 None:intergenic 45.0%
ACGGTGGTTACCTTCTTCTT+TGG - chr1_4:1324335-1324354 None:intergenic 45.0%
GGCGATATACTCAAGAACAG+AGG + chr1_4:1324382-1324401 Msa0142430:CDS 45.0%
GTCACAACTTGTCAATCCCT+CGG + chr1_4:1324481-1324500 Msa0142430:CDS 45.0%
ACGGAGATAGATTTCACCGA+GGG - chr1_4:1324500-1324519 None:intergenic 45.0%
!! AGTATGATGATGGGCGTAGT+AGG + chr1_4:1324965-1324984 Msa0142430:CDS 45.0%
CATTGTCAAGGGGAAGCTAA+AGG + chr1_4:1325087-1325106 Msa0142430:CDS 45.0%
! ATCTTGGGGAAGTGCATTAC+CGG + chr1_4:1325118-1325137 Msa0142430:CDS 45.0%
CCTCTTCATACTTCTGAGTC+CGG - chr1_4:1325140-1325159 None:intergenic 45.0%
!! TTATGAGAAGGCGCTTGGTT+TGG + chr1_4:1325170-1325189 Msa0142430:CDS 45.0%
! TGGTTTGGCGAAGTCTTTAG+AGG + chr1_4:1325185-1325204 Msa0142430:CDS 45.0%
ACTCAAGAGAGATGTAGCCT+CGG + chr1_4:1325311-1325330 Msa0142430:CDS 45.0%
AGTATCTGCTGCAGGAAAAC+GGG + chr1_4:1325358-1325377 Msa0142430:CDS 45.0%
! AACGCCTTGTTGAGAAAGCA+AGG + chr1_4:1325388-1325407 Msa0142430:CDS 45.0%
!! CACTTGTGCTTGTTATGCCA+AGG + chr1_4:1325566-1325585 Msa0142430:intron 45.0%
GCCCAACCAACTTGTAAAGT+TGG - chr1_4:1325757-1325776 None:intergenic 45.0%
! TACCAGTTAATGGACCGCAA+CGG - chr1_4:1325924-1325943 None:intergenic 45.0%
TTGCGGTCCATTAACTGGTA+GGG + chr1_4:1325924-1325943 Msa0142430:intron 45.0%
CTCCAGAAAACACAGTTCTG+AGG - chr1_4:1326012-1326031 None:intergenic 45.0%
AACGTTGCAGCTCCAGAAAT+AGG + chr1_4:1326362-1326381 Msa0142430:intron 45.0%
TAGCGAATGACCTTTGTGAC+AGG + chr1_4:1326602-1326621 Msa0142430:CDS 45.0%
ATGACCTTTGTGACAGGCAA+AGG + chr1_4:1326608-1326627 Msa0142430:CDS 45.0%
CTTTGTGACAGGCAAAGGTT+GGG + chr1_4:1326613-1326632 Msa0142430:CDS 45.0%
AAAAGTTGAAGGGTCGCATC+AGG - chr1_4:1327165-1327184 None:intergenic 45.0%
GGTTGATCTGTATGCTTTGC+TGG + chr1_4:1327294-1327313 Msa0142430:intron 45.0%
CCAATTCATCTTCAGGAGTC+AGG - chr1_4:1328385-1328404 None:intergenic 45.0%
CCTGACTCCTGAAGATGAAT+TGG + chr1_4:1328382-1328401 Msa0142430:CDS 45.0%
GTCAACCTGCTTTGTAGAGT+TGG - chr1_4:1328492-1328511 None:intergenic 45.0%
AGTGAGCATCAAGCAGTTTC+TGG + chr1_4:1328542-1328561 Msa0142430:CDS 45.0%
! TGATGACGAGGATGATGAAG+TGG + chr1_4:1328595-1328614 Msa0142430:CDS 45.0%
AGTGGAATGCTCAAGCAGAA+AGG + chr1_4:1328613-1328632 Msa0142430:CDS 45.0%
TATCCGCCTGTGGATGATTT+GGG + chr1_4:1328844-1328863 Msa0142430:intron 45.0%
AAACCCAAATCATCCACAGG+CGG - chr1_4:1328850-1328869 None:intergenic 45.0%
CCAAAACCCAAATCATCCAC+AGG - chr1_4:1328853-1328872 None:intergenic 45.0%
!! CCTGTGGATGATTTGGGTTT+TGG + chr1_4:1328850-1328869 Msa0142430:intron 45.0%
!!! GGATGATTTGGGTTTTGGGA+TGG + chr1_4:1328855-1328874 Msa0142430:intron 45.0%
AAAGGCTCGAGTCCAAATAC+AGG + chr1_4:1328941-1328960 Msa0142430:CDS 45.0%
CTAAAACTTCCAGACGTTCC+AGG + chr1_4:1328966-1328985 Msa0142430:CDS 45.0%
GCTGAACCTTACTTTCCTAG+TGG + chr1_4:1329010-1329029 Msa0142430:CDS 45.0%
GGAATGATGCATCATGGGAT+GGG - chr1_4:1329080-1329099 None:intergenic 45.0%
GAGAATATAAAGGAGGCCTG+AGG - chr1_4:1329211-1329230 None:intergenic 45.0%
! CCCTCTGATTTCTTTTCTGC+TGG - chr1_4:1329369-1329388 None:intergenic 45.0%
AAGGGCTCGGCAGAAAAAAA+TGG - chr1_4:1329555-1329574 None:intergenic 45.0%
! AAGCAGTTAGGTAAAGGCAC+AGG - chr1_4:1330193-1330212 None:intergenic 45.0%
GCTTCTGAATCCATCCTTGA+AGG - chr1_4:1330327-1330346 None:intergenic 45.0%
AATGTACGTAGACTGCTGCA+AGG + chr1_4:1330357-1330376 Msa0142430:CDS 45.0%
ATGTACGTAGACTGCTGCAA+GGG + chr1_4:1330358-1330377 Msa0142430:CDS 45.0%
GTCTGTGGAACCAAAGATCA+AGG + chr1_4:1330384-1330403 Msa0142430:CDS 45.0%
TGTCACAGAAGTGGCAATAG+AGG - chr1_4:1330464-1330483 None:intergenic 45.0%
!! GGGGAGCATCTAAAAGCAAA+AGG - chr1_4:1330493-1330512 None:intergenic 45.0%
! GAATGCAGTGCATCGATCAA+TGG - chr1_4:1330620-1330639 None:intergenic 45.0%
ACCGTACTTCTTGCAAGTAC+AGG - chr1_4:1330849-1330868 None:intergenic 45.0%
TTTATAGCCTTCCATGGGCT+TGG + chr1_4:1330938-1330957 Msa0142430:intron 45.0%
TTATAGCCTTCCATGGGCTT+GGG + chr1_4:1330939-1330958 Msa0142430:intron 45.0%
ACTTGGTTTCCAAGCAACAG+GGG + chr1_4:1330970-1330989 Msa0142430:intron 45.0%
! AACCTCTAAAAGAGGGTCTG+GGG + chr1_4:1331117-1331136 Msa0142430:intron 45.0%
GGACCGCCATAACTTTCTAA+AGG - chr1_4:1331267-1331286 None:intergenic 45.0%
ATCTTACGGCGACTTAACTC+TGG + chr1_4:1331463-1331482 Msa0142430:CDS 45.0%
! TGGCCCAACAACTTTGTTTC+AGG + chr1_4:1331505-1331524 Msa0142430:CDS 45.0%
CAAAAGGGGTGGCTTATAAG+GGG - chr1_4:1331576-1331595 None:intergenic 45.0%
GCAAAAGGGGTGGCTTATAA+GGG - chr1_4:1331577-1331596 None:intergenic 45.0%
TGCAAAAGGGGTGGCTTATA+AGG - chr1_4:1331578-1331597 None:intergenic 45.0%
TTGTACACATGCAAAAGGGG+TGG - chr1_4:1331587-1331606 None:intergenic 45.0%
GAGAAAAGGTTTACCCTTGC+AGG + chr1_4:1331658-1331677 Msa0142430:intron 45.0%
AACCGTCTTACTGATGCATG+TGG + chr1_4:1332076-1332095 Msa0142430:CDS 45.0%
TGGCAGAGATTCAAGTCATG+TGG - chr1_4:1332142-1332161 None:intergenic 45.0%
TGACTTGAATCTCTGCCAAC+TGG + chr1_4:1332144-1332163 Msa0142430:intron 45.0%
! CAAGGTATTCAGCATCCCTT+GGG - chr1_4:1332189-1332208 None:intergenic 45.0%
! TCAAGGTATTCAGCATCCCT+TGG - chr1_4:1332190-1332209 None:intergenic 45.0%
!! AACGGGTTAAGAGAAGGTCA+AGG - chr1_4:1332207-1332226 None:intergenic 45.0%
CACTTATGGTCTCTCGAATG+TGG + chr1_4:1332290-1332309 Msa0142430:intron 45.0%
AGACAAATGATATCGGCAGC+GGG - chr1_4:1332342-1332361 None:intergenic 45.0%
ATTGCTGATGCATTGGACTC+TGG + chr1_4:1332445-1332464 Msa0142430:CDS 45.0%
GACACAATCACCCTGTAACT+GGG + chr1_4:1332571-1332590 Msa0142430:CDS 45.0%
! TAAGAGATGGATGGTGGCAT+CGG - chr1_4:1332655-1332674 None:intergenic 45.0%
GATGCGATGTAAGAGATGGA+TGG - chr1_4:1332664-1332683 None:intergenic 45.0%
! TGGTCTAAAACTAGGCAGAC+CGG + chr1_4:1332766-1332785 Msa0142430:CDS 45.0%
!! ATACTTGGAGGCACTGGTAT+TGG + chr1_4:1332839-1332858 Msa0142430:CDS 45.0%
! TGAGGCATTATTCTGCAGGA+AGG + chr1_4:1332945-1332964 Msa0142430:intron 45.0%
! GAGGCATTATTCTGCAGGAA+GGG + chr1_4:1332946-1332965 Msa0142430:intron 45.0%
AGGCATTATTCTGCAGGAAG+GGG + chr1_4:1332947-1332966 Msa0142430:intron 45.0%
TAGGATTTCCTTCCAGGTTC+AGG - chr1_4:1333100-1333119 None:intergenic 45.0%
GCTAAGTTGTGGATCCATGT+CGG - chr1_4:1333205-1333224 None:intergenic 45.0%
TGTCTGACAAGGCTAAGTTG+TGG - chr1_4:1333216-1333235 None:intergenic 45.0%
!! ACAACTTAGCCTTGTCAGAC+AGG + chr1_4:1333215-1333234 Msa0142430:intron 45.0%
AAAATCTGGCCTGTCTGACA+AGG - chr1_4:1333227-1333246 None:intergenic 45.0%
TCTATTTGTAGGCCTGGGTT+TGG - chr1_4:1333682-1333701 None:intergenic 45.0%
ACTGATAACAGGCCAGACTT+GGG + chr1_4:1333707-1333726 Msa0142430:intron 45.0%
ACATGCATCACAAGTAGTGG+TGG - chr1_4:1333765-1333784 None:intergenic 45.0%
GTGATGCATGTTTGCTTGAC+TGG + chr1_4:1333774-1333793 Msa0142430:intron 45.0%
CAATCATAGGGCTTGATGGA+GGG - chr1_4:1334002-1334021 None:intergenic 45.0%
TCAATCATAGGGCTTGATGG+AGG - chr1_4:1334003-1334022 None:intergenic 45.0%
AGGTCAATCATAGGGCTTGA+TGG - chr1_4:1334006-1334025 None:intergenic 45.0%
AAATGTCAACTTGGGCTTGC+TGG + chr1_4:1334519-1334538 Msa0142430:CDS 45.0%
CACATAATTGAGGCTCTTGC+AGG + chr1_4:1334549-1334568 Msa0142430:CDS 45.0%
TGCTGAGTGAAATGGCAGTT+GGG - chr1_4:1334937-1334956 None:intergenic 45.0%
TTGCTGAGTGAAATGGCAGT+TGG - chr1_4:1334938-1334957 None:intergenic 45.0%
CAAGCTGCAGAAACACTCTA+TGG + chr1_4:1335027-1335046 Msa0142430:CDS 45.0%
CAGAAACACTCTATGGTTCG+TGG + chr1_4:1335034-1335053 Msa0142430:CDS 45.0%
ATGTGCCTGTGACTTGAAAG+GGG - chr1_4:1335072-1335091 None:intergenic 45.0%
GATGTGCCTGTGACTTGAAA+GGG - chr1_4:1335073-1335092 None:intergenic 45.0%
TGATGTGCCTGTGACTTGAA+AGG - chr1_4:1335074-1335093 None:intergenic 45.0%
AGGCAATTCTCTGGTCAATG+AGG + chr1_4:1335207-1335226 Msa0142430:three_prime_UTR 45.0%
!! TTAATTAAATGTATTAATTA+GGG - chr1_4:1324573-1324592 None:intergenic 5.0%
!! ATTAATTAAATGTATTAATT+AGG - chr1_4:1324574-1324593 None:intergenic 5.0%
!! TGTAATTAATTATTTATTTA+TGG + chr1_4:1324604-1324623 Msa0142430:intron 5.0%
!! AATTTAATAAATATAACTAA+TGG + chr1_4:1325682-1325701 Msa0142430:intron 5.0%
!!! ATTCATTTTATAATAAAATA+TGG + chr1_4:1327049-1327068 Msa0142430:intron 5.0%
!!! TATTTTTTTCTATTTTTTTA+TGG - chr1_4:1331334-1331353 None:intergenic 5.0%
!! CGACGATGAACGGTGTTGTT+TGG - chr1_4:1324262-1324281 None:intergenic 50.0%
CGTTCATCGTCGTTTCTCGA+TGG + chr1_4:1324270-1324289 Msa0142430:exon 50.0%
TACCGGAACGCCAAAGAAGA+AGG + chr1_4:1324322-1324341 Msa0142430:CDS 50.0%
GACGGAGATAGATTTCACCG+AGG - chr1_4:1324501-1324520 None:intergenic 50.0%
! GGAGCTTGATAACTTGCACG+AGG + chr1_4:1324888-1324907 Msa0142430:CDS 50.0%
! GCTTGATAACTTGCACGAGG+CGG + chr1_4:1324891-1324910 Msa0142430:CDS 50.0%
! CCGGACTCAGAAGTATGAAG+AGG + chr1_4:1325137-1325156 Msa0142430:CDS 50.0%
! CTCAGAAGTATGAAGAGGCG+CGG + chr1_4:1325142-1325161 Msa0142430:CDS 50.0%
!! GGCGCGGTCTTATTATGAGA+AGG + chr1_4:1325158-1325177 Msa0142430:CDS 50.0%
! GGCGAAGTCTTTAGAGGATG+AGG + chr1_4:1325191-1325210 Msa0142430:CDS 50.0%
GTATCTGCTGCAGGAAAACG+GGG + chr1_4:1325359-1325378 Msa0142430:CDS 50.0%
AAGCAAGGATGATCGCTGCA+TGG + chr1_4:1325403-1325422 Msa0142430:CDS 50.0%
AGCAAGGATGATCGCTGCAT+GGG + chr1_4:1325404-1325423 Msa0142430:CDS 50.0%
AAGGCAGAGCCAAGTTTGCA+GGG + chr1_4:1325585-1325604 Msa0142430:intron 50.0%
GTTGCGGTCCATTAACTGGT+AGG + chr1_4:1325923-1325942 Msa0142430:intron 50.0%
TGCGGTCCATTAACTGGTAG+GGG + chr1_4:1325925-1325944 Msa0142430:intron 50.0%
AACTGCTGTGCACCTGTGTA+TGG + chr1_4:1326187-1326206 Msa0142430:intron 50.0%
CCAACCTTTGCCTGTCACAA+AGG - chr1_4:1326615-1326634 None:intergenic 50.0%
CCTTTGTGACAGGCAAAGGT+TGG + chr1_4:1326612-1326631 Msa0142430:CDS 50.0%
TTGCCTATCCGTCCATGATG+AGG + chr1_4:1327262-1327281 Msa0142430:intron 50.0%
CATCCTCATCATGGACGGAT+AGG - chr1_4:1327268-1327287 None:intergenic 50.0%
ACTGGCATCCTCATCATGGA+CGG - chr1_4:1327273-1327292 None:intergenic 50.0%
TCCATGATGAGGATGCCAGT+TGG + chr1_4:1327273-1327292 Msa0142430:intron 50.0%
ACCAACTGGCATCCTCATCA+TGG - chr1_4:1327277-1327296 None:intergenic 50.0%
TTGCTTATAGGGGCAAGCAC+TGG + chr1_4:1327323-1327342 Msa0142430:intron 50.0%
! CAACTGTTTGAAGCACGTCG+TGG - chr1_4:1327793-1327812 None:intergenic 50.0%
CAGAAAGCTGTACACCAGGA+AGG - chr1_4:1327980-1327999 None:intergenic 50.0%
AAGGCAGAAAGCTGTACACC+AGG - chr1_4:1327984-1328003 None:intergenic 50.0%
TGGTGTACAGCTTTCTGCCT+TGG + chr1_4:1327983-1328002 Msa0142430:CDS 50.0%
!! TTGATGACGAGGATGAGACC+AGG + chr1_4:1328036-1328055 Msa0142430:CDS 50.0%
TTGTCAGACTTCTGGGTGAC+TGG - chr1_4:1328514-1328533 None:intergenic 50.0%
CTATCCGCCTGTGGATGATT+TGG + chr1_4:1328843-1328862 Msa0142430:intron 50.0%
!!! GATTTGGGTTTTGGGATGGC+AGG + chr1_4:1328859-1328878 Msa0142430:intron 50.0%
GGGAATGATGCATCATGGGA+TGG - chr1_4:1329081-1329100 None:intergenic 50.0%
!! GTAACAGAAGATGGCGGAGA+TGG - chr1_4:1329465-1329484 None:intergenic 50.0%
AAGCCAAGTGAACAAGGGCT+CGG - chr1_4:1329568-1329587 None:intergenic 50.0%
CAGCACATAAAGTGTGCTGG+AGG + chr1_4:1329623-1329642 Msa0142430:CDS 50.0%
! TGGAGGAGATCTAGAATCGC+TGG + chr1_4:1329640-1329659 Msa0142430:CDS 50.0%
TAGAATGGGCAAAGGCTCTG+TGG - chr1_4:1330162-1330181 None:intergenic 50.0%
TGTACGTAGACTGCTGCAAG+GGG + chr1_4:1330359-1330378 Msa0142430:CDS 50.0%
CGATGCACTGCATTCACAGA+TGG + chr1_4:1330625-1330644 Msa0142430:CDS 50.0%
TAGGTACTTACGTTAGCCCC+AGG + chr1_4:1330997-1331016 Msa0142430:intron 50.0%
! TGAGCTTCTAGAAACCGCCT+GGG - chr1_4:1331017-1331036 None:intergenic 50.0%
! TTGAGCTTCTAGAAACCGCC+TGG - chr1_4:1331018-1331037 None:intergenic 50.0%
! AATGAGTCGGTGCCTTTCAG+CGG + chr1_4:1331036-1331055 Msa0142430:intron 50.0%
! GAGGTTTAAGACCCCCAGAA+GGG - chr1_4:1331103-1331122 None:intergenic 50.0%
! AGAGGTTTAAGACCCCCAGA+AGG - chr1_4:1331104-1331123 None:intergenic 50.0%
TTGTCCCAAGACTCGTGCTT+GGG - chr1_4:1331195-1331214 None:intergenic 50.0%
! AAGGCGAAGTGATGACGTCA+GGG + chr1_4:1331213-1331232 Msa0142430:intron 50.0%
GGCTTATAAGGGGTCCTAAC+AGG - chr1_4:1331566-1331585 None:intergenic 50.0%
GGGTGATTGTGTCCTGTCAA+AGG - chr1_4:1332564-1332583 None:intergenic 50.0%
GGACACAATCACCCTGTAAC+TGG + chr1_4:1332570-1332589 Msa0142430:intron 50.0%
CCACAGCATTCCCAGTTACA+GGG - chr1_4:1332584-1332603 None:intergenic 50.0%
ACCACAGCATTCCCAGTTAC+AGG - chr1_4:1332585-1332604 None:intergenic 50.0%
GCGATGTAAGAGATGGATGG+TGG - chr1_4:1332661-1332680 None:intergenic 50.0%
TGGCAAAGGCTATCGACAAC+CGG - chr1_4:1332788-1332807 None:intergenic 50.0%
ATAGCCTTTGCCAGCTTGCA+GGG + chr1_4:1332795-1332814 Msa0142430:CDS 50.0%
GCAGGGACCTTGACTTTATC+AGG + chr1_4:1332812-1332831 Msa0142430:CDS 50.0%
! GGACTAATACTTGGAGGCAC+TGG + chr1_4:1332833-1332852 Msa0142430:CDS 50.0%
GTGAATAGGTGGTAGGAGCA+AGG - chr1_4:1332879-1332898 None:intergenic 50.0%
ACCATTGCTCAAAGGGACTG+AGG + chr1_4:1332986-1333005 Msa0142430:intron 50.0%
TCCTCAGTCCCTTTGAGCAA+TGG - chr1_4:1332990-1333009 None:intergenic 50.0%
TTCCATCACTGACCTGAACC+TGG + chr1_4:1333085-1333104 Msa0142430:intron 50.0%
TTCCAGGTTCAGGTCAGTGA+TGG - chr1_4:1333090-1333109 None:intergenic 50.0%
ATCACTGACCTGAACCTGGA+AGG + chr1_4:1333089-1333108 Msa0142430:intron 50.0%
GACTGATAACAGGCCAGACT+TGG + chr1_4:1333706-1333725 Msa0142430:intron 50.0%
GGGCCTTGCAAAGTCTAACT+CGG + chr1_4:1333727-1333746 Msa0142430:intron 50.0%
GGCTTGATGGAGGGAAAAGT+AGG - chr1_4:1333993-1334012 None:intergenic 50.0%
ATCAGATAACAGCAGCCTGG+AGG + chr1_4:1334651-1334670 Msa0142430:intron 50.0%
CAGCAAGATTAAGCTCCTCC+AGG - chr1_4:1334669-1334688 None:intergenic 50.0%
! TACGACCCCTTTCAAGTCAC+AGG + chr1_4:1335064-1335083 Msa0142430:CDS 50.0%
TTGCCCAACGCGCTTCTTCA+CGG - chr1_4:1324354-1324373 None:intergenic 55.0%
CAAAGAGCTAGCACGCAGCT+AGG + chr1_4:1324682-1324701 Msa0142430:CDS 55.0%
ACGAGGCGGCCAATATACTC+AGG + chr1_4:1324905-1324924 Msa0142430:CDS 55.0%
GCGGCCAATATACTCAGGAG+AGG + chr1_4:1324910-1324929 Msa0142430:CDS 55.0%
AGAGATGTAGCCTCGGCTAG+AGG + chr1_4:1325318-1325337 Msa0142430:CDS 55.0%
GAGATGTAGCCTCGGCTAGA+GGG + chr1_4:1325319-1325338 Msa0142430:CDS 55.0%
GATGATCGCTGCATGGGAGA+AGG + chr1_4:1325410-1325429 Msa0142430:CDS 55.0%
!! CTGCAAACTTGGCTCTGCCT+TGG - chr1_4:1325586-1325605 None:intergenic 55.0%
CAAGGCAGAGCCAAGTTTGC+AGG + chr1_4:1325584-1325603 Msa0142430:intron 55.0%
AGGCAGAGCCAAGTTTGCAG+GGG + chr1_4:1325586-1325605 Msa0142430:intron 55.0%
! AAGGTTGGCCCCTGCAAACT+TGG - chr1_4:1325597-1325616 None:intergenic 55.0%
CACAGAGCTATGAGCTGCGA+AGG - chr1_4:1325635-1325654 None:intergenic 55.0%
TGCCGTTGCGGTCCATTAAC+TGG + chr1_4:1325919-1325938 Msa0142430:intron 55.0%
GCTGTTGAAGCAGACCTTCC+TGG + chr1_4:1327963-1327982 Msa0142430:CDS 55.0%
! TTTGGGATGGCAGGTTCTCC+CGG + chr1_4:1328868-1328887 Msa0142430:intron 55.0%
GCTCAATGACCTGGAACGTC+TGG - chr1_4:1328978-1328997 None:intergenic 55.0%
! GAAGAAGCCTTGTGTGCTGC+TGG + chr1_4:1329282-1329301 Msa0142430:CDS 55.0%
CTGATCACCAGCAGCACACA+AGG - chr1_4:1329292-1329311 None:intergenic 55.0%
!! CACTCTTGGGAGCATTCCCA+AGG - chr1_4:1330915-1330934 None:intergenic 55.0%
CTTGGGAATGCTCCCAAGAG+TGG + chr1_4:1330913-1330932 Msa0142430:intron 55.0%
GTAACCAAAGCCCAAGCCCA+TGG - chr1_4:1330952-1330971 None:intergenic 55.0%
! GGGCTTGGGCTTTGGTTACT+TGG + chr1_4:1330953-1330972 Msa0142430:intron 55.0%
!! TCCAAGCAACAGGGGCGTTT+AGG + chr1_4:1330978-1330997 Msa0142430:intron 55.0%
ACCTAAACGCCCCTGTTGCT+TGG - chr1_4:1330982-1331001 None:intergenic 55.0%
GTACTTACGTTAGCCCCAGG+CGG + chr1_4:1331000-1331019 Msa0142430:intron 55.0%
! GAGCTTCTAGAAACCGCCTG+GGG - chr1_4:1331016-1331035 None:intergenic 55.0%
! ATGAGTCGGTGCCTTTCAGC+GGG + chr1_4:1331037-1331056 Msa0142430:intron 55.0%
! GTCCCCAGACCCTCTTTTAG+AGG - chr1_4:1331122-1331141 None:intergenic 55.0%
TGTCCCAAGACTCGTGCTTG+GGG - chr1_4:1331194-1331213 None:intergenic 55.0%
CTTGTCCCAAGACTCGTGCT+TGG - chr1_4:1331196-1331215 None:intergenic 55.0%
CAAGCACGAGTCTTGGGACA+AGG + chr1_4:1331194-1331213 Msa0142430:intron 55.0%
! CAAGGCGAAGTGATGACGTC+AGG + chr1_4:1331212-1331231 Msa0142430:intron 55.0%
! AGGCGAAGTGATGACGTCAG+GGG + chr1_4:1331214-1331233 Msa0142430:intron 55.0%
GGGATTCAATGGCCTCCAGA+AGG - chr1_4:1331246-1331265 None:intergenic 55.0%
! GGCGGTCCAAGTCCTTTTGT+TGG + chr1_4:1331279-1331298 Msa0142430:intron 55.0%
CCCTGTAACTGGGAATGCTG+TGG + chr1_4:1332581-1332600 Msa0142430:CDS 55.0%
GATAGCCTTTGCCAGCTTGC+AGG + chr1_4:1332794-1332813 Msa0142430:CDS 55.0%
AAGTCAAGGTCCCTGCAAGC+TGG - chr1_4:1332808-1332827 None:intergenic 55.0%
AAAGGCCAGACTGTCCGACA+TGG + chr1_4:1333188-1333207 Msa0142430:intron 55.0%
TGGATCCATGTCGGACAGTC+TGG - chr1_4:1333196-1333215 None:intergenic 55.0%
GACTTTGCAAGGCCCAAGTC+TGG - chr1_4:1333722-1333741 None:intergenic 55.0%
! ACCACCGTGAAGAAGCGCGT+TGG + chr1_4:1324347-1324366 Msa0142430:CDS 60.0%
! CCACCGTGAAGAAGCGCGTT+GGG + chr1_4:1324348-1324367 Msa0142430:CDS 60.0%
GCGCGTTGGGCAAACGTCAT+CGG + chr1_4:1324361-1324380 Msa0142430:CDS 60.0%
CGAGCGCAAGTATCTGCTGC+AGG + chr1_4:1325350-1325369 Msa0142430:CDS 60.0%
CCAGGGCCCCTACCAGTTAA+TGG - chr1_4:1325934-1325953 None:intergenic 60.0%
CCATTAACTGGTAGGGGCCC+TGG + chr1_4:1325931-1325950 Msa0142430:intron 60.0%
TAACGAGTGCCTCCGTCGCT+GGG + chr1_4:1325965-1325984 Msa0142430:intron 60.0%
AGCATACTTGGCCCCAGCGA+CGG - chr1_4:1325980-1325999 None:intergenic 60.0%
TCTCCAGTGCTATCCGCCTG+TGG + chr1_4:1328834-1328853 Msa0142430:intron 60.0%
CATCCACAGGCGGATAGCAC+TGG - chr1_4:1328840-1328859 None:intergenic 60.0%
TGGCAGGTTCTCCCGGAGTA+TGG + chr1_4:1328875-1328894 Msa0142430:intron 60.0%
CTGCCGAGCCCTTGTTCACT+TGG + chr1_4:1329562-1329581 Msa0142430:intron 60.0%
CTGCTGCAAGGGGTTGTCTG+TGG + chr1_4:1330369-1330388 Msa0142430:CDS 60.0%
CCAAAGCCCAAGCCCATGGA+AGG - chr1_4:1330948-1330967 None:intergenic 60.0%
CCTTCCATGGGCTTGGGCTT+TGG + chr1_4:1330945-1330964 Msa0142430:intron 60.0%
! TGAGTCGGTGCCTTTCAGCG+GGG + chr1_4:1331038-1331057 Msa0142430:intron 60.0%
TTAAGACCCCCAGAAGGGCC+AGG - chr1_4:1331098-1331117 None:intergenic 60.0%
AAGAGGGTCTGGGGACCTTC+TGG + chr1_4:1331126-1331145 Msa0142430:intron 60.0%
TGGAGGCCTCCTGGGACTTT+AGG + chr1_4:1331146-1331165 Msa0142430:intron 60.0%
TCCCAAGACTCGTGCTTGGG+GGG - chr1_4:1331192-1331211 None:intergenic 60.0%
GTCCCAAGACTCGTGCTTGG+GGG - chr1_4:1331193-1331212 None:intergenic 60.0%
! GGCGAAGTGATGACGTCAGG+GGG + chr1_4:1331215-1331234 Msa0142430:intron 60.0%
CGTCAGGGGGATAGACCTTC+TGG + chr1_4:1331228-1331247 Msa0142430:intron 60.0%
CAGGGGGATAGACCTTCTGG+AGG + chr1_4:1331231-1331250 Msa0142430:intron 60.0%
AGGTCCCTGCAAGCTGGCAA+AGG - chr1_4:1332802-1332821 None:intergenic 60.0%
! AGGGCAGAAGCTGCTGCTTC+TGG + chr1_4:1334868-1334887 Msa0142430:CDS 60.0%
CCCAACGCGCTTCTTCACGG+TGG - chr1_4:1324351-1324370 None:intergenic 65.0%
GTGCAGTGTCCCTCTAGCCG+AGG - chr1_4:1325331-1325350 None:intergenic 65.0%
AGGCACTCGTTACCCTCCGG+GGG - chr1_4:1325957-1325976 None:intergenic 65.0%
! GAGGCACTCGTTACCCTCCG+GGG - chr1_4:1325958-1325977 None:intergenic 65.0%
!! GGAGGCACTCGTTACCCTCC+GGG - chr1_4:1325959-1325978 None:intergenic 65.0%
!! CGGAGGCACTCGTTACCCTC+CGG - chr1_4:1325960-1325979 None:intergenic 65.0%
GTAACGAGTGCCTCCGTCGC+TGG + chr1_4:1325964-1325983 Msa0142430:intron 65.0%
AACGAGTGCCTCCGTCGCTG+GGG + chr1_4:1325966-1325985 Msa0142430:intron 65.0%
ATACTTGGCCCCAGCGACGG+AGG - chr1_4:1325977-1325996 None:intergenic 65.0%
AGGGTCTGGGGACCTTCTGG+AGG + chr1_4:1331129-1331148 Msa0142430:intron 65.0%
! GGACCTTCTGGAGGCCTCCT+GGG + chr1_4:1331138-1331157 Msa0142430:intron 65.0%
AGTCCCAGGAGGCCTCCAGA+AGG - chr1_4:1331144-1331163 None:intergenic 65.0%
AGCCCCCCAAGCACGAGTCT+TGG + chr1_4:1331187-1331206 Msa0142430:intron 65.0%
GCCCCCCAAGCACGAGTCTT+GGG + chr1_4:1331188-1331207 Msa0142430:intron 65.0%
TCGTTACCCTCCGGGGGCCA+GGG - chr1_4:1325951-1325970 None:intergenic 70.0%
TCCAAGAGGGCTCCCCAGCC+CGG - chr1_4:1331069-1331088 None:intergenic 70.0%
GGCTGGGGAGCCCTCTTGGA+GGG + chr1_4:1331069-1331088 Msa0142430:intron 70.0%
AGCCCTCTTGGAGGGCGACC+TGG + chr1_4:1331077-1331096 Msa0142430:intron 70.0%
GGCCAGGTCGCCCTCCAAGA+GGG - chr1_4:1331082-1331101 None:intergenic 70.0%
GAGGGCGACCTGGCCCTTCT+GGG + chr1_4:1331087-1331106 Msa0142430:intron 70.0%
AGGGCGACCTGGCCCTTCTG+GGG + chr1_4:1331088-1331107 Msa0142430:intron 70.0%
! GGGACCTTCTGGAGGCCTCC+TGG + chr1_4:1331137-1331156 Msa0142430:intron 70.0%
GACTCGTGCTTGGGGGGCTG+TGG - chr1_4:1331186-1331205 None:intergenic 70.0%
CTCGTTACCCTCCGGGGGCC+AGG - chr1_4:1325952-1325971 None:intergenic 75.0%
CCAAGAGGGCTCCCCAGCCC+GGG - chr1_4:1331068-1331087 None:intergenic 75.0%
GGGCTGGGGAGCCCTCTTGG+AGG + chr1_4:1331068-1331087 Msa0142430:intron 75.0%
GGGCCAGGTCGCCCTCCAAG+AGG - chr1_4:1331083-1331102 None:intergenic 75.0%
GGAGGGCGACCTGGCCCTTC+TGG + chr1_4:1331086-1331105 Msa0142430:intron 75.0%
GGGCGACCTGGCCCTTCTGG+GGG + chr1_4:1331089-1331108 Msa0142430:intron 75.0%
! CTGGTAGGGGCCCTGGCCCC+CGG + chr1_4:1325938-1325957 Msa0142430:intron 80.0%
! TAGGGGCCCTGGCCCCCGGA+GGG + chr1_4:1325942-1325961 Msa0142430:intron 80.0%
! GCCTTTCAGCGGGGCGCGCC+CGG + chr1_4:1331047-1331066 Msa0142430:intron 80.0%
! CCTTTCAGCGGGGCGCGCCC+GGG + chr1_4:1331048-1331067 Msa0142430:intron 80.0%
!! CCCGGGCTGGGGAGCCCTCT+TGG + chr1_4:1331065-1331084 Msa0142430:intron 80.0%
! GTAGGGGCCCTGGCCCCCGG+AGG + chr1_4:1325941-1325960 Msa0142430:intron 85.0%
! CCCGGGCGCGCCCCGCTGAA+AGG - chr1_4:1331051-1331070 None:intergenic 85.0%
! TCAGCGGGGCGCGCCCGGGC+TGG + chr1_4:1331052-1331071 Msa0142430:intron 90.0%
! CAGCGGGGCGCGCCCGGGCT+GGG + chr1_4:1331053-1331072 Msa0142430:intron 90.0%
! AGCGGGGCGCGCCCGGGCTG+GGG + chr1_4:1331054-1331073 Msa0142430:intron 90.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 1324188 1335400 1324188 ID=Msa0142430;Name=Msa0142430
chr1_4 mRNA 1324188 1335400 1324188 ID=Msa0142430-mRNA-1;Parent=Msa0142430;Name=Msa0142430-mRNA-1;_AED=0.07;_eAED=0.07;_QI=101|0.94|0.94|1|1|1|19|233|1263
chr1_4 exon 1324188 1324552 1324188 ID=Msa0142430-mRNA-1:exon:430;Parent=Msa0142430-mRNA-1
chr1_4 exon 1324634 1325431 1324634 ID=Msa0142430-mRNA-1:exon:431;Parent=Msa0142430-mRNA-1
chr1_4 exon 1326571 1326747 1326571 ID=Msa0142430-mRNA-1:exon:432;Parent=Msa0142430-mRNA-1
chr1_4 exon 1327333 1327424 1327333 ID=Msa0142430-mRNA-1:exon:433;Parent=Msa0142430-mRNA-1
chr1_4 exon 1327959 1328057 1327959 ID=Msa0142430-mRNA-1:exon:434;Parent=Msa0142430-mRNA-1
chr1_4 exon 1328214 1328677 1328214 ID=Msa0142430-mRNA-1:exon:435;Parent=Msa0142430-mRNA-1
chr1_4 exon 1328766 1328797 1328766 ID=Msa0142430-mRNA-1:exon:436;Parent=Msa0142430-mRNA-1
chr1_4 exon 1328881 1329108 1328881 ID=Msa0142430-mRNA-1:exon:437;Parent=Msa0142430-mRNA-1
chr1_4 exon 1329240 1329387 1329240 ID=Msa0142430-mRNA-1:exon:438;Parent=Msa0142430-mRNA-1
chr1_4 exon 1329606 1329722 1329606 ID=Msa0142430-mRNA-1:exon:439;Parent=Msa0142430-mRNA-1
chr1_4 exon 1330332 1330432 1330332 ID=Msa0142430-mRNA-1:exon:440;Parent=Msa0142430-mRNA-1
chr1_4 exon 1330560 1330683 1330560 ID=Msa0142430-mRNA-1:exon:441;Parent=Msa0142430-mRNA-1
chr1_4 exon 1331414 1331526 1331414 ID=Msa0142430-mRNA-1:exon:442;Parent=Msa0142430-mRNA-1
chr1_4 exon 1332022 1332133 1332022 ID=Msa0142430-mRNA-1:exon:443;Parent=Msa0142430-mRNA-1
chr1_4 exon 1332389 1332493 1332389 ID=Msa0142430-mRNA-1:exon:444;Parent=Msa0142430-mRNA-1
chr1_4 exon 1332571 1332637 1332571 ID=Msa0142430-mRNA-1:exon:445;Parent=Msa0142430-mRNA-1
chr1_4 exon 1332745 1332865 1332745 ID=Msa0142430-mRNA-1:exon:446;Parent=Msa0142430-mRNA-1
chr1_4 exon 1334453 1334570 1334453 ID=Msa0142430-mRNA-1:exon:447;Parent=Msa0142430-mRNA-1
chr1_4 exon 1334656 1335400 1334656 ID=Msa0142430-mRNA-1:exon:448;Parent=Msa0142430-mRNA-1
chr1_4 five_prime_UTR 1324188 1324288 1324188 ID=Msa0142430-mRNA-1:five_prime_utr;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1324289 1324552 1324289 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1324634 1325431 1324634 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1326571 1326747 1326571 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1327333 1327424 1327333 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1327959 1328057 1327959 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1328214 1328677 1328214 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1328766 1328797 1328766 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1328881 1329108 1328881 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1329240 1329387 1329240 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1329606 1329722 1329606 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1330332 1330432 1330332 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1330560 1330683 1330560 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1331414 1331526 1331414 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1332022 1332133 1332022 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1332389 1332493 1332389 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1332571 1332637 1332571 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1332745 1332865 1332745 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1334453 1334570 1334453 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 CDS 1334656 1335167 1334656 ID=Msa0142430-mRNA-1:cds;Parent=Msa0142430-mRNA-1
chr1_4 three_prime_UTR 1335168 1335400 1335168 ID=Msa0142430-mRNA-1:three_prime_utr;Parent=Msa0142430-mRNA-1
Gene Sequence

>Msa0142430

ATGGACTCAGAGCTCAAATCGGCGAAATCTGCTTACCGGAACGCCAAAGAAGAAGGTAACCACCGTGAAGAAGCGCGTTGGGCAAACGTCATCGGCGATATACTCAAGAACAGAGGTGAATACGTTAAAGCTCTCAAATGGCTCCGAATCGATTATGAAGTTTCGCTGAAGTTCTTATCGGAGAATCACTTAGTCACAACTTGTCAATCCCTCGGTGAAATCTATCTCCGTCTTGAGCAATTTTCCGATGCCCTAATTTTTCAGAAGAAACATCTAGATCTAGCAAGGGATAATGAAGATCTAGTTGAGCAACAAAGAGCTAGCACGCAGCTAGGTCGAACTTATCACGAACTGTTTTCGAGATCTGAACATGATCACAATTCAATTCGCAATGCGAAAAAGTATTTTAAGTCTGCTATGGATCTCGCCGTTAGTCTGAAAGAGAATCCGCCAAATAATAAGTCTTCGTTTTTGAAGGAATATATTGATGCTTATAATAACATTGGTATGCTTGAAATGGAGCTTGATAACTTGCACGAGGCGGCCAATATACTCAGGAGAGGATTGAAGATTTGCGACGAAGAGGAGATTAGCGAGTATGATGATGGGCGTAGTAGGTTACATCACAATTTAGGGAATGTGTATATGGAATTGAGGAAGTGGAATGACGCTATGAAGAATATGAAGAGGGATATTTTGATTTGTCATAAAATTGGACATTGTCAAGGGGAAGCTAAAGGGTATATTAATCTTGGGGAAGTGCATTACCGGACTCAGAAGTATGAAGAGGCGCGGTCTTATTATGAGAAGGCGCTTGGTTTGGCGAAGTCTTTAGAGGATGAGGATGCTTTGGTCAGACAAATTAATCAGAACATTGAAACTGTTAAAGAAGCAGTTAAAGTTATGGATGAAATCAAGAAAGAAGAGCAGAAACTTAAAAAACTCAAGAGAGATGTAGCCTCGGCTAGAGGGACACTGCACGAGCGCAAGTATCTGCTGCAGGAAAACGGGGCTCTTGAACGCCTTGTTGAGAAAGCAAGGATGATCGCTGCATGGGAGAAGTATTGTGAATTTGCGAAGGAGAGGAAGAAAGTAGCGAATGACCTTTGTGACAGGCAAAGGTTGGGTGATTCATATCTGGATGTCGGAGAATCTTACCAGAAGCTCAGAAAATTCAACAAGGCAATCAAATGGTATGAAAAGAGTTGGAAAATGTACAAAACAATTGGCAACTTAGAGGGGCAAGCACTGGTGAAAATTAATATTGGTAATGTTTTGGATTCTACTCACAATTGGAAAGAAGCGTGTGATGCATATAAGGAGAGCTACAGGATTGCTGTTGAAGCAGACCTTCCTGGTGTACAGCTTTCTGCCTTGGAAAACATGCATTATAGCAACATGATCAGATTTGATGACGAGGATGAGACCAGGAGGTTGAAACTTCTAATTGATGAGCTTAAGAAGTCAAATGAAGAGATAGAGGCTAATAATGCGCCTGATGATTGTTGCTCTGAAACTGATACTGAAGCAGATGATTGTATGTCAAATAGTGGGCCAGATGATTTTTGCTTTCCAAAGACAACTTATAGATCAAAAACCCTGACTCCTGAAGATGAATTGGATGATGATACTACGCCTCTTATGTCAATGTATCAGTCTATCAAAGGCTCATCTAGAAAAATTACAGGTCACAAGGAAAGTCATACCAACTCTACAAAGCAGGTTGACCAGTCACCCAGAAGTCTGACAAAACTAAAAAGTGAGCATCAAGCAGTTTCTGGTCGTAAACGTGTCCGTGTAATTCTTTCTGATGATGACGAGGATGATGAAGTGGAATGCTCAAGCAGAAAGGATCGTGACTACCCGTTAGAAGACTTGCCTAATTATGATACAATTAAAAGTAAAATCAGTCCTAGTAAAATTCAGGTTCTCCCGGAGTATGGATCTAAATGTGCAATTAATGTTGAAGAAAGTAGTAGTTCTTTCAAAGGCTCGAGTCCAAATACAGGCACTAAAACTTCCAGACGTTCCAGGTCATTGAGCAACGATATAGTTGCTGAACCTTACTTTCCTAGTGGTTCTAAATGCGATACAGATGTCTCTGGCAAACAAAATGTTGTAGCCCATCCCATGATGCATCATTCCCTACATGATAGATATATTGCATGTCGGATTGGGGATGATATAGTTTATGTAGAAGAAGCCTTGTGTGCTGCTGGTGATCAGTTTGACATTGACTCGTTAAAGGCTGTAGTTGCATGCAAATACTATCTACAATTTCCAGCAGAAAAGAAATCAGAGGGTTTGTTGCCCATTATTCAGCACATAAAGTGTGCTGGAGGAGATCTAGAATCGCTGGAAACTGTTGAAAATATTATGGAGCATCTGCAAAATAACATGGTTGAAGCTTTCATTGATGGATGGATTCAGAAGCGCCTAATAAAAATGTACGTAGACTGCTGCAAGGGGTTGTCTGTGGAACCAAAGATCAAGGTGCTGAAGAAACTTTACAATTTACAGGTTTCTGATGATGAAATCATTGCATCGGACTGCGACCTCCAAGATTTGTCCATAACACCATTGATCGATGCACTGCATTCACAGATGGCATTTTCAATGCTTGACATCTCTCACAATTGTTTAGGAAATGGGACAATGGAGAAACTTCGAAAGGTATTCACAACATCAGGTCAATCTTACGGCGACTTAACTCTGGATTTGCATTGTAATCGATTTGGCCCAACAACTTTGTTTCAGATTTGTGAATGCTCTGTGCTATTTGCTCGACTCGAAGTGCTTAACATTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACAATCTTAAAAAACTGTACAGCTCTTTGTAGCTTGAATGTAGAGAACTGTAGTATCACATCCAAAACCATTCAAAAAATTGCTGATGCATTGGACTCTGGATCTGTACTTTCACACCTTTGTATAGGACACAATCACCCTGTAACTGGGAATGCTGTGGTTAATCTTCTATCCAAGCTTTCTACTTTAAAAAGGTTTTCTGAGTTGAATATGAGTGGTCTAAAACTAGGCAGACCGGTTGTCGATAGCCTTTGCCAGCTTGCAGGGACCTTGACTTTATCAGGACTAATACTTGGAGGCACTGGTATTGGAAATGGCTGCAATACTCTATTTTCGCTTCTCATAAACTCACAATGCTGTCTCAAAGTTTTGGTCCTTAAGAAATGTCAACTTGGGCTTGCTGGAGTTGTTCACATAATTGAGGCTCTTGCAGATAACAGCAGCCTGGAGGAGCTTAATCTTGCTGATAATTCTGTTTCAACGGAACTTTCTGCTCAACAATGTGATGCATCAGCTAAAAGCTGTTCACAGAACCAGGAGCAGAAACTTGATACTATGAAAGTGGATGATAATCAAGAGGTCTTTTGCTCTCTAAATACTTTAGACGATCAGCTGGAAGTTGCTGATAGTGAAGATAATCAAGTTAGGGCAGAAGCTGCTGCTTCTGGAATTGACGACAGTTGTGCCAGTTCATGTCAAAGAAATTCATCTCCCAACTGCCATTTCACTCAGCAAATTTCAAGTGCTATTACAAAGGCAAAGAACTTACAATCTCTAGACCTTAGCAATAATAATTTTTCTGCACAAGCTGCAGAAACACTCTATGGTTCGTGGACAACTTTACGACCCCTTTCAAGTCACAGGCACATCACTAAGCACATTATCCATTTCTCAACAAAGGAAAAGAAATGCTGCAGCATGAAACCTTGCTGTAAGAAAGTTTGA
Protein sequence

>Msa0142430

MDSELKSAKSAYRNAKEEGNHREEARWANVIGDILKNRGEYVKALKWLRIDYEVSLKFLSENHLVTTCQSLGEIYLRLEQFSDALIFQKKHLDLARDNEDLVEQQRASTQLGRTYHELFSRSEHDHNSIRNAKKYFKSAMDLAVSLKENPPNNKSSFLKEYIDAYNNIGMLEMELDNLHEAANILRRGLKICDEEEISEYDDGRSRLHHNLGNVYMELRKWNDAMKNMKRDILICHKIGHCQGEAKGYINLGEVHYRTQKYEEARSYYEKALGLAKSLEDEDALVRQINQNIETVKEAVKVMDEIKKEEQKLKKLKRDVASARGTLHERKYLLQENGALERLVEKARMIAAWEKYCEFAKERKKVANDLCDRQRLGDSYLDVGESYQKLRKFNKAIKWYEKSWKMYKTIGNLEGQALVKINIGNVLDSTHNWKEACDAYKESYRIAVEADLPGVQLSALENMHYSNMIRFDDEDETRRLKLLIDELKKSNEEIEANNAPDDCCSETDTEADDCMSNSGPDDFCFPKTTYRSKTLTPEDELDDDTTPLMSMYQSIKGSSRKITGHKESHTNSTKQVDQSPRSLTKLKSEHQAVSGRKRVRVILSDDDEDDEVECSSRKDRDYPLEDLPNYDTIKSKISPSKIQVLPEYGSKCAINVEESSSSFKGSSPNTGTKTSRRSRSLSNDIVAEPYFPSGSKCDTDVSGKQNVVAHPMMHHSLHDRYIACRIGDDIVYVEEALCAAGDQFDIDSLKAVVACKYYLQFPAEKKSEGLLPIIQHIKCAGGDLESLETVENIMEHLQNNMVEAFIDGWIQKRLIKMYVDCCKGLSVEPKIKVLKKLYNLQVSDDEIIASDCDLQDLSITPLIDALHSQMAFSMLDISHNCLGNGTMEKLRKVFTTSGQSYGDLTLDLHCNRFGPTTLFQICECSVLFARLEVLNISGNRLTDACGSYLSTILKNCTALCSLNVENCSITSKTIQKIADALDSGSVLSHLCIGHNHPVTGNAVVNLLSKLSTLKRFSELNMSGLKLGRPVVDSLCQLAGTLTLSGLILGGTGIGNGCNTLFSLLINSQCCLKVLVLKKCQLGLAGVVHIIEALADNSSLEELNLADNSVSTELSAQQCDASAKSCSQNQEQKLDTMKVDDNQEVFCSLNTLDDQLEVADSEDNQVRAEAAASGIDDSCASSCQRNSSPNCHFTQQISSAITKAKNLQSLDLSNNNFSAQAAETLYGSWTTLRPLSSHRHITKHIIHFSTKEKKCCSMKPCCKKV*