AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0310260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0310260 MtrunA17_Chr2g0278991 80.349 1262 167 8 1 1187 35 1290 0.0 1898
Msa0310260 MtrunA17_Chr1g0154711 39.024 246 143 5 943 1184 260 502 2.49e-41 160
Msa0310260 MtrunA17_Chr5g0403781 35.458 251 156 4 938 1184 196 444 3.25e-38 149
Msa0310260 MtrunA17_Chr3g0106291 32.210 267 149 7 938 1184 52 306 5.36e-23 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0310260 AT4G33500.1 50.752 266 127 2 923 1185 456 720 1.12e-81 283
Msa0310260 AT5G66720.2 39.271 247 146 3 941 1184 163 408 9.20e-44 165
Msa0310260 AT5G66720.1 39.184 245 145 3 943 1184 168 411 2.39e-43 164
Msa0310260 AT4G16580.1 35.739 291 175 6 899 1184 175 458 9.47e-42 160
Msa0310260 AT2G30170.1 31.538 260 157 8 940 1184 42 295 2.36e-25 108
Msa0310260 AT2G30170.3 31.250 224 135 7 974 1184 1 218 5.71e-21 93.6
Msa0310260 AT2G30170.5 30.890 191 125 5 940 1125 42 230 4.55e-18 86.3
Msa0310260 AT2G30170.6 30.890 191 125 5 940 1125 7 195 8.06e-18 84.3
Msa0310260 AT2G30170.2 34.211 152 84 5 1045 1184 8 155 8.19e-14 70.9
Msa0310260 AT2G30170.7 30.323 155 103 4 974 1125 1 153 1.22e-13 71.2

Find 263 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTCATGGATTATGTTTC+TGG 0.090596 2_4:+5106675 None:intergenic
TTTCCGATACATATAGTTAA+AGG 0.210970 2_4:-5100488 Msa0310260:CDS
GCACCGGTATCTACTTCTTT+GGG 0.256310 2_4:-5103550 Msa0310260:CDS
TCCAGGGTCATCTTCTGTTT+TGG 0.256931 2_4:-5101677 Msa0310260:CDS
CAAGAAGCTTCCACTGTCTA+TGG 0.257958 2_4:-5106608 Msa0310260:CDS
GAGAATCAACCTCAGGTTTC+AGG 0.262814 2_4:+5100114 None:intergenic
GCCAATATCCACTTCTTTAG+AGG 0.266786 2_4:-5103734 Msa0310260:CDS
GGCACCGGTATCTACTTCTT+TGG 0.271048 2_4:-5103551 Msa0310260:CDS
CAGCCACAACTAGCCAGTTT+AGG 0.273827 2_4:+5102106 None:intergenic
GAGTCTAAACAAGTTGATTA+TGG 0.279847 2_4:-5103904 Msa0310260:CDS
GTTTGAGAAGGTGGTGGTTT+AGG 0.281424 2_4:+5106561 None:intergenic
ATGCATTTGATTCTCCCTTT+TGG 0.282550 2_4:+5099101 None:intergenic
GATGGTGATGTGATTGTATT+TGG 0.289321 2_4:-5100209 Msa0310260:CDS
GTAATACTGGAGTGTATATC+AGG 0.291464 2_4:-5101801 Msa0310260:CDS
ATCAACTTGTTTGGACTCTA+AGG 0.292328 2_4:+5103999 None:intergenic
TGGCACCGATTCACTTGTTT+TGG 0.304893 2_4:+5104962 None:intergenic
GTACTATAATTAGCTTGTTC+AGG 0.305511 2_4:+5103619 None:intergenic
TGCACTATAATCAACTTGTT+TGG 0.305805 2_4:+5104176 None:intergenic
TCTGAGTAGTGGTCCTTCTT+TGG 0.309038 2_4:-5105427 Msa0310260:CDS
ATTAGCTTGTTCAGGTTCTA+AGG 0.316680 2_4:+5103627 None:intergenic
CAGTATCATGTTTACCAAAC+TGG 0.324194 2_4:+5099326 None:intergenic
ATATTATTTCTCCCCTAAAC+TGG 0.324245 2_4:-5102119 Msa0310260:CDS
TTAGACTCTAAAGTAGATAT+TGG 0.325562 2_4:+5103919 None:intergenic
GGGATTATTACTGTATATAA+TGG 0.326805 2_4:-5099264 Msa0310260:three_prime_UTR
AGTGGGGTTGGAGTAGAAAA+TGG 0.328519 2_4:+5106531 None:intergenic
AGGGAGAATCAAATGCATTA+TGG 0.342843 2_4:-5099096 Msa0310260:three_prime_UTR
AGCCACAACTAGCCAGTTTA+GGG 0.343048 2_4:+5102107 None:intergenic
TTAACATAAACATTAATTCA+TGG 0.351731 2_4:+5106662 None:intergenic
TGATAGCGAAACAAATGATA+TGG 0.352841 2_4:-5104256 Msa0310260:CDS
TGCACTGTAATCAACTTGTT+TGG 0.354242 2_4:+5103990 None:intergenic
CAATATCAAGACTGCCAGTT+AGG 0.356638 2_4:+5104331 None:intergenic
GGTGAAGGTGAAGAATCTTC+TGG 0.357767 2_4:+5106506 None:intergenic
TCCCTTTGGTGATGCAGCTC+AGG 0.365043 2_4:-5099480 Msa0310260:CDS
GGTGATGCAGCTCAGGCTTT+AGG 0.366266 2_4:-5099473 Msa0310260:CDS
TTGTGTTTAGTTGGATGATT+TGG 0.367992 2_4:-5103345 Msa0310260:intron
GAGTCAGAGCAAGTTGGTTA+TGG 0.373321 2_4:-5104924 Msa0310260:CDS
GACTCTATGGTAGTGGATAC+TGG 0.375502 2_4:+5104663 None:intergenic
ACCAACTTCTTCAGACTCTA+AGG 0.378636 2_4:+5104557 None:intergenic
TTCTCTTCAGTTTCCAAAGA+AGG 0.378711 2_4:+5105414 None:intergenic
ACCAACTTGTTCAGACTCTA+TGG 0.380754 2_4:+5104650 None:intergenic
GCCTCTAAAGAAGTGGATAT+TGG 0.382317 2_4:+5103733 None:intergenic
GACTCTAAAGAGAAGGATTC+TGG 0.383176 2_4:+5104291 None:intergenic
AATTATGCAGGGAGTAATAC+TGG 0.387479 2_4:-5101814 Msa0310260:intron
TGCTGCTGACTTGACTGAAT+TGG 0.391750 2_4:-5105210 Msa0310260:CDS
TGAAGAAGGTGTTAGTGTTT+TGG 0.392220 2_4:-5105844 Msa0310260:CDS
GACTCTAAGGTAGTGGATAC+TGG 0.398173 2_4:+5104570 None:intergenic
ACCTGCACATACAACCAGTT+TGG 0.400048 2_4:-5099340 Msa0310260:three_prime_UTR
GTGAAGAATCTTCTGGGAAG+TGG 0.400053 2_4:+5106513 None:intergenic
TGATGCTGACAATATTGATT+TGG 0.400786 2_4:-5103944 Msa0310260:CDS
TTAGGCTATGTGGGTTATGC+AGG 0.403492 2_4:-5099455 Msa0310260:CDS
AATTCATGGATTATGTTTCT+GGG 0.405047 2_4:+5106676 None:intergenic
GCAGGAAATAGCAGAAATAT+TGG 0.409348 2_4:-5099546 Msa0310260:intron
GAAGTTGAATTGAGAAGTGT+AGG 0.415809 2_4:+5106468 None:intergenic
CATGTTCTTCTTGAGGAGAA+GGG 0.416075 2_4:+5106436 None:intergenic
CAAGCTAATTATAGTACAAC+AGG 0.420508 2_4:-5103613 Msa0310260:CDS
GACTCTGAAGAAATTGATAC+TGG 0.422017 2_4:+5104942 None:intergenic
TACATAGGTGGGAAGTTCAT+TGG 0.422151 2_4:+5099287 None:intergenic
TCATGTTCTTCTTGAGGAGA+AGG 0.427379 2_4:+5106435 None:intergenic
ATCACAGGTGTCTCACTCTC+AGG 0.431084 2_4:+5105666 None:intergenic
ATGAGGATGATAGTAACTTA+AGG 0.431210 2_4:-5105791 Msa0310260:CDS
AGTGAAACAGACAATCTTAC+TGG 0.433299 2_4:-5104531 Msa0310260:CDS
CCCTCCATGCAGCTAACGTT+GGG 0.434196 2_4:-5100583 Msa0310260:CDS
TGTGCCATTATCCACTTCCT+TGG 0.434488 2_4:-5104388 Msa0310260:CDS
GAAACAATCCACCAGATTGA+TGG 0.435059 2_4:-5103784 Msa0310260:CDS
TGGCATCAGCACTGCCAGTC+AGG 0.436271 2_4:+5104052 None:intergenic
CTGTACTGACATAAGTGAAC+TGG 0.437884 2_4:-5104874 Msa0310260:CDS
GATTCCAAGGAAGTGGATAA+TGG 0.440228 2_4:+5104384 None:intergenic
AGAGCAGCAAACGGCGTAGC+AGG 0.440780 2_4:-5105242 Msa0310260:CDS
GTATCCACTTCTTTAGAGTC+TGG 0.448484 2_4:-5105182 Msa0310260:CDS
TGAAAATCCAATACTTAATA+CGG 0.448797 2_4:-5103264 Msa0310260:CDS
ATTATCCACTTCCTTGGAAT+CGG 0.450007 2_4:-5104382 Msa0310260:CDS
GGTTCTAAGGAAGTGGATAA+TGG 0.453069 2_4:+5103640 None:intergenic
GTGATTGTATTTGGCACAAA+TGG 0.455025 2_4:-5100200 Msa0310260:CDS
GTTTGCTTTGACAGAGCATC+CGG 0.455862 2_4:-5105964 Msa0310260:intron
TTCGCTATCATTAGCTTGTA+CGG 0.457627 2_4:+5104269 None:intergenic
CTTGATGTCATCTCTTCAAC+TGG 0.457786 2_4:-5106408 Msa0310260:intron
AGTGCAACAGACAACCTAAC+TGG 0.458889 2_4:-5104345 Msa0310260:CDS
TGAGGATGATAGTAACTTAA+GGG 0.460749 2_4:-5105790 Msa0310260:CDS
GAAGGTGGTGGTTTAGGAGA+AGG 0.461134 2_4:+5106567 None:intergenic
TGTAACTGTTATAGTGTCAT+TGG 0.461295 2_4:-5099417 Msa0310260:CDS
AGTGGAAGCTTCTTGAGAAT+AGG 0.463168 2_4:+5106616 None:intergenic
GAGTCTGAAGAAGTGGATAC+TGG 0.464490 2_4:+5104477 None:intergenic
AATGAACTTCCCACCTATGT+AGG 0.466503 2_4:-5099285 Msa0310260:three_prime_UTR
TCTGGTACCGTATTAAGTAT+TGG 0.466981 2_4:+5103257 None:intergenic
AGCTCAGGCTTTAGGCTATG+TGG 0.467198 2_4:-5099465 Msa0310260:CDS
TGATGCCGACAGAAGTGAAT+TGG 0.467871 2_4:-5105153 Msa0310260:CDS
CAGCATCAACACCATCAATC+TGG 0.469660 2_4:+5103773 None:intergenic
TGATATTGCAAGAAGTGAAT+TGG 0.469666 2_4:-5104316 Msa0310260:CDS
ATCTGAACTGAATGTATCTC+TGG 0.471057 2_4:+5103239 None:intergenic
CTGAATGGAAAAGTTCCAAA+AGG 0.471825 2_4:-5099116 Msa0310260:three_prime_UTR
TTATAGTGCAACAGACGATC+TGG 0.474010 2_4:-5104163 Msa0310260:CDS
TTACAGTGCAACAGACAATC+TGG 0.475600 2_4:-5103977 Msa0310260:CDS
CGATGCTGAAATGAGTGATT+TGG 0.479228 2_4:-5104595 Msa0310260:CDS
GGAGAAGGAAGATTGGAGCA+TGG 0.479429 2_4:+5106582 None:intergenic
AACCGGACAGGCAATCGAAC+CGG 0.480400 2_4:+5099032 None:intergenic
TCCCCTAAACTGGCTAGTTG+TGG 0.482884 2_4:-5102109 Msa0310260:CDS
TGATGCCACAATAAATGAAT+TGG 0.483922 2_4:-5104037 Msa0310260:CDS
TGGTTTAGGAGAAGGAAGAT+TGG 0.484291 2_4:+5106575 None:intergenic
AATCTTCTGGGAAGTGGGGT+TGG 0.487494 2_4:+5106519 None:intergenic
TTGTTCCGATTCCAAGGAAG+TGG 0.487495 2_4:+5104377 None:intergenic
GGAAGAAGGGTTTGAGAAGG+TGG 0.491344 2_4:+5106552 None:intergenic
GAAAACACATCTGACTCTGC+TGG 0.491799 2_4:+5105453 None:intergenic
CTTCTGATAAGAACTTCTGC+AGG 0.494468 2_4:+5101718 None:intergenic
TTGTTCAGGTTCTAAGGAAG+TGG 0.496019 2_4:+5103633 None:intergenic
AGTGTATATCAGGGAACTCA+TGG 0.497532 2_4:-5101791 Msa0310260:CDS
TGATACTAATGATAGTGAAT+TGG 0.498648 2_4:-5104130 Msa0310260:CDS
GAAACTGAAGAGAAAGAAGA+AGG 0.498971 2_4:-5105405 Msa0310260:CDS
CTAGTTGTGGCTGATGGAGT+TGG 0.499488 2_4:-5102096 Msa0310260:CDS
GTGAAGGTGAAGAATCTTCT+GGG 0.499605 2_4:+5106507 None:intergenic
AGATCCACTAGAAGTCCCTT+TGG 0.500751 2_4:-5099494 Msa0310260:CDS
TTGCACCAATTCATTTATTG+TGG 0.500992 2_4:+5104032 None:intergenic
ACCTTAGAGTCTGAAGAAGT+TGG 0.501051 2_4:-5104558 Msa0310260:CDS
TGATACCGAGTTAAGTGAAC+CGG 0.501272 2_4:-5103665 Msa0310260:CDS
CGTCATCAACATTACCAGTC+AGG 0.501930 2_4:+5103869 None:intergenic
ACCGCTGAAACACATTCTCC+AGG 0.502198 2_4:-5101694 Msa0310260:CDS
AACTGGCTAGTTGTGGCTGA+TGG 0.503157 2_4:-5102102 Msa0310260:CDS
TTCTTCAGACTCTAAGGTAG+TGG 0.505929 2_4:+5104563 None:intergenic
AGTTCTTCATGTTCTTCTTG+AGG 0.507019 2_4:+5106429 None:intergenic
TTTGGTTCCATCCTCAGACT+TGG 0.508422 2_4:-5103327 Msa0310260:CDS
CGGTATCAACAACGGCAGTC+AGG 0.509782 2_4:+5103680 None:intergenic
AGCAGAAATATTGGCGACGA+CGG 0.510585 2_4:-5099537 Msa0310260:CDS
TTGTTCAGACTCTGAAGAAG+TGG 0.512425 2_4:+5105028 None:intergenic
GTTGGTCAGTGGTCACTTGA+AGG 0.512818 2_4:-5102078 Msa0310260:intron
TTGTTTGCCAAGTCTGAGGA+TGG 0.513151 2_4:+5103320 None:intergenic
TTGTTCAGAGTCTGAAGAAG+TGG 0.513493 2_4:+5104470 None:intergenic
GAGTCTAAAGAAGTCGGTAC+TGG 0.513722 2_4:+5103826 None:intergenic
TGATGCCAAAACAAGTGAAT+CGG 0.514096 2_4:-5104967 Msa0310260:CDS
GGCACAACTCCATTCATGTC+AGG 0.515492 2_4:+5104405 None:intergenic
GCAGCTAACGTTGGGAACAC+TGG 0.516288 2_4:-5100575 Msa0310260:CDS
AGTACAACAGGCAACTTGAC+AGG 0.516642 2_4:-5103601 Msa0310260:CDS
TTGGCAAACAAAATAGATGT+TGG 0.517860 2_4:-5103308 Msa0310260:CDS
TATAATGGAATGGAATGTTA+TGG 0.520241 2_4:-5099249 Msa0310260:three_prime_UTR
AGAAGGGTTTGAGAAGGTGG+TGG 0.521722 2_4:+5106555 None:intergenic
TTGTTCAGACTCTATGGTAG+TGG 0.522311 2_4:+5104656 None:intergenic
TTGTTCCAATTCACTTCTGT+CGG 0.522865 2_4:+5105148 None:intergenic
GAAATATATGTACATTCTGC+CGG 0.524213 2_4:-5099051 Msa0310260:three_prime_UTR
ATGTTCTTCTTGAGGAGAAG+GGG 0.526853 2_4:+5106437 None:intergenic
TGAAGAATCTTCTGGGAAGT+GGG 0.529167 2_4:+5106514 None:intergenic
GCTCAGGCTTTAGGCTATGT+GGG 0.532313 2_4:-5099464 Msa0310260:CDS
ATCGACTTGTTCCGATTCCA+AGG 0.534276 2_4:+5104371 None:intergenic
CCCAACGTTAGCTGCATGGA+GGG 0.538389 2_4:+5100583 None:intergenic
ACTACCAGACTCTAAAGAAG+TGG 0.539985 2_4:+5105178 None:intergenic
TATTAAATAACATTACTGAA+TGG 0.541772 2_4:-5099131 Msa0310260:three_prime_UTR
GCCCTCCATGCAGCTAACGT+TGG 0.542788 2_4:-5100584 Msa0310260:CDS
ACCAAACTGGTTGTATGTGC+AGG 0.542871 2_4:+5099339 None:intergenic
TGCTGACTTGACTGAATTGG+TGG 0.543677 2_4:-5105207 Msa0310260:CDS
GAGTTTCTGTTTGTTTAACT+CGG 0.544082 2_4:+5105887 None:intergenic
GCCTGAGCTGCATCACCAAA+GGG 0.544140 2_4:+5099479 None:intergenic
TTGTTTGGACTCTAAGGAAG+GGG 0.545864 2_4:+5104005 None:intergenic
GAAGCTTCTTGAGAATAGGT+TGG 0.547720 2_4:+5106620 None:intergenic
ATTGGCGACGACGGCACAAG+AGG 0.548199 2_4:-5099528 Msa0310260:CDS
AGTAATAATCCCTACATAGG+TGG 0.549944 2_4:+5099275 None:intergenic
GAGGAAGAAGATTCTCAAGT+TGG 0.551088 2_4:-5105513 Msa0310260:CDS
TTGCTCAGACTGTAAAGAAG+TGG 0.551220 2_4:+5104842 None:intergenic
TCTTTACAGTCTGAGCAAGA+TGG 0.552610 2_4:-5104837 Msa0310260:CDS
AGAATAGACAATGGATGAGG+TGG 0.553528 2_4:+5099162 None:intergenic
TCAGTTCAGATGGCTAGTGA+TGG 0.553869 2_4:-5103227 Msa0310260:CDS
GCGACGACGGCACAAGAGGT+TGG 0.554934 2_4:-5099524 Msa0310260:CDS
TCTTCATCAACAACACCCTC+AGG 0.555654 2_4:+5105861 None:intergenic
TTGTTCAGCCTCTAAAGAAG+TGG 0.555861 2_4:+5103726 None:intergenic
TATTACTGTATATAATGGAA+TGG 0.555994 2_4:-5099259 Msa0310260:three_prime_UTR
TGAATGGAAAAGTTCCAAAA+GGG 0.556611 2_4:-5099115 Msa0310260:three_prime_UTR
ATGAACTTCCCACCTATGTA+GGG 0.558113 2_4:-5099284 Msa0310260:three_prime_UTR
ACTTGTTTGGACTCTAAGGA+AGG 0.560648 2_4:+5104003 None:intergenic
TGGAGTAGAAAATGGAAGAA+GGG 0.561739 2_4:+5106539 None:intergenic
AGCGAAACAAATGATATGGC+TGG 0.562321 2_4:-5104252 Msa0310260:CDS
AGTGCAACAGACAATCTTAG+TGG 0.563780 2_4:-5105089 Msa0310260:CDS
AGAGATACATTCAGTTCAGA+TGG 0.565033 2_4:-5103237 Msa0310260:CDS
ACTTGCAAGTCATTGATCAC+AGG 0.567258 2_4:+5105651 None:intergenic
TGACATAACTGAATCTGCGC+TGG 0.568271 2_4:-5104775 Msa0310260:CDS
TTGTTTGGACTCTAAAGATG+TGG 0.568461 2_4:+5104191 None:intergenic
GGCTATGTGGGTTATGCAGG+TGG 0.570519 2_4:-5099452 Msa0310260:CDS
TGTTCCCAACGTTAGCTGCA+TGG 0.571239 2_4:+5100579 None:intergenic
AAGTTGAATTGAGAAGTGTA+GGG 0.572629 2_4:+5106469 None:intergenic
ATGAGAATAGACAATGGATG+AGG 0.572687 2_4:+5099159 None:intergenic
GACGGTACCTCAGAGGGATG+AGG 0.573261 2_4:+5102775 None:intergenic
GACTCTGAAGAAGTGGACTC+TGG 0.573904 2_4:+5105035 None:intergenic
TCATCTTCAACTGTGGTAGT+TGG 0.574935 2_4:-5105756 Msa0310260:CDS
TGATGTTGACATATCTGAAT+CGG 0.575447 2_4:-5105060 Msa0310260:CDS
CACCGGTATCTACTTCTTTG+GGG 0.576765 2_4:-5103549 Msa0310260:CDS
AAGGAAGTGGATAATGGCAC+CGG 0.576910 2_4:+5103646 None:intergenic
AGCCTGAGCTGCATCACCAA+AGG 0.577538 2_4:+5099478 None:intergenic
CAGGGAAAATATTTCAAGAA+CGG 0.579773 2_4:-5102830 Msa0310260:CDS
CAGTTCAGATGGCTAGTGAT+GGG 0.581491 2_4:-5103226 Msa0310260:intron
TGCACTGTAACCATCTTGCT+CGG 0.582003 2_4:+5105106 None:intergenic
TTGGAGTAGAAAATGGAAGA+AGG 0.582134 2_4:+5106538 None:intergenic
GACCCCAAAGAAGTAGATAC+CGG 0.582950 2_4:+5103547 None:intergenic
GACTCTAAAGAAGTCGACAT+TGG 0.584037 2_4:+5104105 None:intergenic
TCTTCAGAGTCAGAGCAAGT+TGG 0.584957 2_4:-5104930 Msa0310260:CDS
ACCATAGAGTCTGAACAAGT+TGG 0.585165 2_4:-5104651 Msa0310260:CDS
TGCCAGGACGGTACCTCAGA+GGG 0.585420 2_4:+5102769 None:intergenic
TGTAGGGGTGTGGTGAGTAG+TGG 0.585676 2_4:+5106485 None:intergenic
TTGCTCGGTCTCTAAAGAAG+TGG 0.586443 2_4:+5105121 None:intergenic
AATTGAGAAGTGTAGGGGTG+TGG 0.587912 2_4:+5106475 None:intergenic
GTAATAATCCCTACATAGGT+GGG 0.590512 2_4:+5099276 None:intergenic
TCGCCTTTAACTATATGTAT+CGG 0.591712 2_4:+5100485 None:intergenic
GGTGCAACTGACAACCTGAC+TGG 0.592148 2_4:-5103883 Msa0310260:CDS
AGTGCAACAGACAATCTGGC+TGG 0.593488 2_4:-5103973 Msa0310260:CDS
AGTGCAACAGACGATCTGGC+TGG 0.593999 2_4:-5104159 Msa0310260:CDS
TTGTACGGACTCTAAAGAGA+AGG 0.594348 2_4:+5104284 None:intergenic
GGATTTATCATTATAAGACA+TGG 0.595192 2_4:-5100554 Msa0310260:CDS
CTTGTTTGGACTCTAAGGAA+GGG 0.598794 2_4:+5104004 None:intergenic
ACCAAAACAGAAGATGACCC+TGG 0.601497 2_4:+5101676 None:intergenic
TACAGTAATAATCCCTACAT+AGG 0.601791 2_4:+5099272 None:intergenic
ATTGTTTCTCTATTAACAGA+CGG 0.602319 2_4:+5103799 None:intergenic
TGACTTATGTGAGTCGGCAC+CGG 0.602980 2_4:-5103566 Msa0310260:CDS
GGTGTGGTGAGTAGTGGTGA+AGG 0.606408 2_4:+5106491 None:intergenic
AGTGCAACAGACAACCTGAC+TGG 0.606595 2_4:-5104066 Msa0310260:CDS
AGAGCAACAGACAATGAGAC+TGG 0.606673 2_4:-5104438 Msa0310260:CDS
GTGTATATCAGGGAACTCAT+GGG 0.608071 2_4:-5101790 Msa0310260:CDS
ATCACCAAAGGGACTTCTAG+TGG 0.609039 2_4:+5099490 None:intergenic
TAAAGAAGTGGATATTGGCA+CGG 0.609477 2_4:+5103738 None:intergenic
GAGGGTGTTGTTGATGAAGA+AGG 0.609745 2_4:-5105858 Msa0310260:CDS
CAAACAGAAACTCGTGCCTG+AGG 0.609745 2_4:-5105877 Msa0310260:CDS
TCTTTAGAGACCGAGCAAGA+TGG 0.609839 2_4:-5105116 Msa0310260:CDS
AGTGTCGATCCTGACATGAA+TGG 0.610069 2_4:-5104414 Msa0310260:CDS
AGTGCAACAAGCAATCTGAC+TGG 0.612324 2_4:-5104717 Msa0310260:CDS
ATAGAAATGAGAATAGACAA+TGG 0.613183 2_4:+5099153 None:intergenic
CATCAACACCATCAATCTGG+TGG 0.617106 2_4:+5103776 None:intergenic
AGTGTGGATAGAGCAGCAAA+CGG 0.618569 2_4:-5105251 Msa0310260:CDS
AATGCAAGAGAAAATCTGAC+TGG 0.618931 2_4:-5104996 Msa0310260:CDS
TGGCTGATGGAGTTGGTCAG+TGG 0.619896 2_4:-5102089 Msa0310260:CDS
AATTGAATCATCTTCAACTG+TGG 0.621843 2_4:-5105763 Msa0310260:CDS
TGGCACCGGTTCACTTAACT+CGG 0.622967 2_4:+5103660 None:intergenic
AATGGAAGAAGGGTTTGAGA+AGG 0.624751 2_4:+5106549 None:intergenic
AAACAGAAACTCGTGCCTGA+GGG 0.626228 2_4:-5105876 Msa0310260:CDS
ATTGCAACAGACAATCTGAC+TGG 0.626528 2_4:-5104810 Msa0310260:CDS
CCGCTGAAACACATTCTCCA+GGG 0.628366 2_4:-5101693 Msa0310260:CDS
AAAACTGAATTCATGAAACA+TGG 0.628437 2_4:+5100508 None:intergenic
TCTTCTTCCTCAGACACACT+CGG 0.630495 2_4:+5105525 None:intergenic
GAGGATGATAGTAACTTAAG+GGG 0.634021 2_4:-5105789 Msa0310260:CDS
AGTTGACAATGGCAATAGTG+TGG 0.634719 2_4:-5105267 Msa0310260:CDS
TTGCTTGCCTCATCCCTCTG+AGG 0.636337 2_4:-5102782 Msa0310260:intron
TCCCAACGTTAGCTGCATGG+AGG 0.637846 2_4:+5100582 None:intergenic
TAATACTGGAGTGTATATCA+GGG 0.638011 2_4:-5101800 Msa0310260:CDS
CAACTGAGTCATCCACGACA+TGG 0.638279 2_4:+5103503 None:intergenic
ACAAGTTGATTATAGTGCAA+CGG 0.649019 2_4:-5103707 Msa0310260:CDS
CCCTGGAGAATGTGTTTCAG+CGG 0.654653 2_4:+5101693 None:intergenic
GCAGCAAACGGCGTAGCAGG+TGG 0.656131 2_4:-5105239 Msa0310260:CDS
GAAGAATCTTCTGGGAAGTG+GGG 0.656238 2_4:+5106515 None:intergenic
GGTTCAGAGTCTAAAGAAGT+CGG 0.656325 2_4:+5103820 None:intergenic
TGAAAGAAATCGCCATGTCG+TGG 0.657765 2_4:-5103515 Msa0310260:CDS
GCTTTGACAGAGCATCCGGA+TGG 0.657857 2_4:-5105960 Msa0310260:intron
CATCTCTCTACAGTTGACAA+TGG 0.671445 2_4:-5105278 Msa0310260:CDS
ATGCCAGGACGGTACCTCAG+AGG 0.673301 2_4:+5102768 None:intergenic
CGACCACTCAGAAATCATTG+AGG 0.674072 2_4:-5100462 Msa0310260:intron
TGACGGCATAACAAGTGAGT+TGG 0.674731 2_4:-5103851 Msa0310260:CDS
CTGACTGGTAATGTTGATGA+CGG 0.675013 2_4:-5103868 Msa0310260:CDS
GCCACAACTAGCCAGTTTAG+GGG 0.678427 2_4:+5102108 None:intergenic
TACAAGATCGATCTAAACGA+TGG 0.679121 2_4:-5100227 Msa0310260:CDS
TGTTGTTCCGAGTGTGTCTG+AGG 0.681569 2_4:-5105532 Msa0310260:CDS
GGTGCAACAGACAATGTGAC+TGG 0.685255 2_4:-5104903 Msa0310260:CDS
ACTTAACTCGGTATCAACAA+CGG 0.685429 2_4:+5103672 None:intergenic
TGATACTGACTTATGTGAGT+CGG 0.686378 2_4:-5103572 Msa0310260:CDS
ACAAGCTAGCCTGAAACCTG+AGG 0.691163 2_4:-5100123 Msa0310260:intron
AGCATGGAAACCATAGACAG+TGG 0.696232 2_4:+5106598 None:intergenic
ATACCTCAATGATTTCTGAG+TGG 0.696662 2_4:+5100459 None:intergenic
TGTTGATGCTGAGTTTAGTG+AGG 0.696992 2_4:-5103761 Msa0310260:CDS
AGTTGAATTGAGAAGTGTAG+GGG 0.715031 2_4:+5106470 None:intergenic
ACAACAGGCAACTTGACAGG+CGG 0.720179 2_4:-5103598 Msa0310260:CDS
ATTGAAACAGACAATCTGAG+TGG 0.728724 2_4:-5104624 Msa0310260:CDS
TGTTGAACAAATGAGCAATG+AGG 0.759356 2_4:-5105808 Msa0310260:CDS
GATGATAGTGATGATCAACA+TGG 0.774921 2_4:-5105597 Msa0310260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGATTTATTTTTATAAACT+AGG + chr2_4:5104493-5104512 None:intergenic 10.0%
!! TAAAAATAAATCTTAGAATT+TGG - chr2_4:5104499-5104518 Msa0310260:CDS 10.0%
!! AAAAATAAATCTTAGAATTT+GGG - chr2_4:5104500-5104519 Msa0310260:CDS 10.0%
!! TATTAAAAAAAATCAAGATA+AGG + chr2_4:5106035-5106054 None:intergenic 10.0%
!! TTAACATAAACATTAATTCA+TGG + chr2_4:5099135-5099154 None:intergenic 15.0%
!!! AATTGATAAACATTTTAAGT+TGG - chr2_4:5100166-5100185 Msa0310260:CDS 15.0%
!! TTCAAAGTTTGATTAAATTA+GGG + chr2_4:5103115-5103134 None:intergenic 15.0%
!! TTTCAAAGTTTGATTAAATT+AGG + chr2_4:5103116-5103135 None:intergenic 15.0%
!!! TATATTTTCTTAATTTTGCT+AGG - chr2_4:5103139-5103158 Msa0310260:intron 15.0%
!!! ATATTTTCTTAATTTTGCTA+GGG - chr2_4:5103140-5103159 Msa0310260:intron 15.0%
!! AATGAAATTGTTAAATTTCT+AGG - chr2_4:5103393-5103412 Msa0310260:intron 15.0%
!!! TGTTATATTTTAAGTGATTT+TGG - chr2_4:5103576-5103595 Msa0310260:CDS 15.0%
!! GAGGAAAATAAAAATATATT+TGG + chr2_4:5103815-5103834 None:intergenic 15.0%
!!! TGTATACAAATTATTTTTGT+AGG + chr2_4:5105502-5105521 None:intergenic 15.0%
!!! AAAGTACATTTTATATAATG+TGG + chr2_4:5105811-5105830 None:intergenic 15.0%
!! TATTCAAAATATCAAAATGA+TGG + chr2_4:5105855-5105874 None:intergenic 15.0%
!!! ATTTTTTAATTTTCAAACAG+TGG + chr2_4:5106575-5106594 None:intergenic 15.0%
!! TATTAAATAACATTACTGAA+TGG - chr2_4:5106663-5106682 Msa0310260:five_prime_UTR 15.0%
!! AAGAAAAAATGAATGAACAA+AGG + chr2_4:5099061-5099080 None:intergenic 20.0%
!!! TTTTTTTCCTTTTTCTTTCT+TGG - chr2_4:5099439-5099458 Msa0310260:CDS 20.0%
!!! TTTTTTCCTTTTTCTTTCTT+GGG - chr2_4:5099440-5099459 Msa0310260:CDS 20.0%
!!! TTTTTGTCTATTTTCCATTT+TGG - chr2_4:5099463-5099482 Msa0310260:CDS 20.0%
!!! AAATCTACTACTTTGAAAAA+GGG - chr2_4:5099761-5099780 Msa0310260:intron 20.0%
!! ATAACTATCAAAAACTTCAA+TGG + chr2_4:5100456-5100475 None:intergenic 20.0%
!! TGAAAATCCAATACTTAATA+CGG - chr2_4:5102530-5102549 Msa0310260:intron 20.0%
!! TTTATGGTGCAATTTAAATA+TGG - chr2_4:5102796-5102815 Msa0310260:CDS 20.0%
!! TTATGGTGCAATTTAAATAT+GGG - chr2_4:5102797-5102816 Msa0310260:CDS 20.0%
!!! ATTTAAATATGGGATTTGTT+AGG - chr2_4:5102807-5102826 Msa0310260:CDS 20.0%
!! TTGTTGAAATACTATTATCT+AGG - chr2_4:5102883-5102902 Msa0310260:intron 20.0%
!!! AATTTTATAAGCTAGAACAA+GGG + chr2_4:5103223-5103242 None:intergenic 20.0%
!!! TAATTTTATAAGCTAGAACA+AGG + chr2_4:5103224-5103243 None:intergenic 20.0%
!!! TGTTCTAGCTTATAAAATTA+TGG - chr2_4:5103224-5103243 Msa0310260:intron 20.0%
!! CTTGAGTAAATAAATCATTT+GGG + chr2_4:5103487-5103506 None:intergenic 20.0%
!! ACTTGAGTAAATAAATCATT+TGG + chr2_4:5103488-5103507 None:intergenic 20.0%
!!! ATTATTTTCCATCTACTTTA+AGG + chr2_4:5103609-5103628 None:intergenic 20.0%
!! AAAACATTATTTCCATTTGT+TGG - chr2_4:5103868-5103887 Msa0310260:CDS 20.0%
!! TCAAATTTGAACATAATAAG+TGG - chr2_4:5104190-5104209 Msa0310260:CDS 20.0%
!! CAAATTTGAACATAATAAGT+GGG - chr2_4:5104191-5104210 Msa0310260:CDS 20.0%
!! ATAACTCTACCATATAAAAT+CGG - chr2_4:5104529-5104548 Msa0310260:CDS 20.0%
!!! TTGATATTTTGAATAAAGTG+TGG - chr2_4:5105860-5105879 Msa0310260:CDS 20.0%
!!! TATTACTGTATATAATGGAA+TGG - chr2_4:5106535-5106554 Msa0310260:CDS 20.0%
!!! TCATTCATTTTTTCTTACAC+AGG - chr2_4:5099065-5099084 Msa0310260:three_prime_UTR 25.0%
!! AATTCATGGATTATGTTTCT+GGG + chr2_4:5099121-5099140 None:intergenic 25.0%
!! TAATTCATGGATTATGTTTC+TGG + chr2_4:5099122-5099141 None:intergenic 25.0%
! TACAAATACATTTGATCTGT+TGG - chr2_4:5099594-5099613 Msa0310260:intron 25.0%
!! CAAATCTACTACTTTGAAAA+AGG - chr2_4:5099760-5099779 Msa0310260:intron 25.0%
!! TGATACTAATGATAGTGAAT+TGG - chr2_4:5101664-5101683 Msa0310260:CDS 25.0%
!!! TTAGACTCTAAAGTAGATAT+TGG + chr2_4:5101878-5101897 None:intergenic 25.0%
!! ATTGTTTCTCTATTAACAGA+CGG + chr2_4:5101998-5102017 None:intergenic 25.0%
!!! AGTTTTATTTCCTTTCCTTA+TGG - chr2_4:5102346-5102365 Msa0310260:intron 25.0%
! ATACAGAAAAGAGAAATAGT+TGG + chr2_4:5102598-5102617 None:intergenic 25.0%
!! ACATTTCTTTTCAACGAAAA+AGG + chr2_4:5102700-5102719 None:intergenic 25.0%
! AATGATATAGAGGTTCTTTA+TGG - chr2_4:5102780-5102799 Msa0310260:intron 25.0%
! TTGATTAATTGAATGTGTAC+AGG - chr2_4:5102945-5102964 Msa0310260:intron 25.0%
! TGATTAATTGAATGTGTACA+GGG - chr2_4:5102946-5102965 Msa0310260:intron 25.0%
! TGATAGAAGTAGATGAAATT+TGG - chr2_4:5103365-5103384 Msa0310260:intron 25.0%
!! TGATTTGCAATTACATATTG+CGG + chr2_4:5103527-5103546 None:intergenic 25.0%
! ACTTAAAATATAACAAGCGT+AGG + chr2_4:5103571-5103590 None:intergenic 25.0%
! TGATGATTCAATTGTACTAT+CGG + chr2_4:5103780-5103799 None:intergenic 25.0%
! TACCAACTTAGAATTTATCT+TGG - chr2_4:5104811-5104830 Msa0310260:CDS 25.0%
! ACCAACTTAGAATTTATCTT+GGG - chr2_4:5104812-5104831 Msa0310260:CDS 25.0%
! TTATAGACCTTATAAACCAA+GGG + chr2_4:5104880-5104899 None:intergenic 25.0%
! TTTATAGACCTTATAAACCA+AGG + chr2_4:5104881-5104900 None:intergenic 25.0%
!! TTTGAAATAACCGTTTCATT+CGG - chr2_4:5104946-5104965 Msa0310260:CDS 25.0%
! ATGTATAGCAATTTATTTGC+AGG - chr2_4:5105188-5105207 Msa0310260:CDS 25.0%
! GGATTTATCATTATAAGACA+TGG - chr2_4:5105240-5105259 Msa0310260:CDS 25.0%
! AAAACTGAATTCATGAAACA+TGG + chr2_4:5105289-5105308 None:intergenic 25.0%
! TTTCCGATACATATAGTTAA+AGG - chr2_4:5105306-5105325 Msa0310260:intron 25.0%
! GATGGAAAAGAAAGAAATAA+AGG + chr2_4:5105707-5105726 None:intergenic 25.0%
!!! TTATTTCTTTCTTTTCCATC+TGG - chr2_4:5105707-5105726 Msa0310260:CDS 25.0%
! GGGATTATTACTGTATATAA+TGG - chr2_4:5106530-5106549 Msa0310260:CDS 25.0%
!! TATAATGGAATGGAATGTTA+TGG - chr2_4:5106545-5106564 Msa0310260:CDS 25.0%
! ATAGAAATGAGAATAGACAA+TGG + chr2_4:5106644-5106663 None:intergenic 25.0%
! AAGTTGAATTGAGAAGTGTA+GGG + chr2_4:5099328-5099347 None:intergenic 30.0%
CAAAAACCCAAGAAAGAAAA+AGG + chr2_4:5099449-5099468 None:intergenic 30.0%
!!! ATTTTCCATTTTGGTTAGTG+AGG - chr2_4:5099472-5099491 Msa0310260:CDS 30.0%
! GTATTTTTCGTTGATACTTG+TGG - chr2_4:5099783-5099802 Msa0310260:intron 30.0%
!!! GGAAGTTTTTTGTTCACATT+TGG - chr2_4:5099855-5099874 Msa0310260:intron 30.0%
GAGTTTCTGTTTGTTTAACT+CGG + chr2_4:5099910-5099929 None:intergenic 30.0%
ATGAGGATGATAGTAACTTA+AGG - chr2_4:5100003-5100022 Msa0310260:intron 30.0%
TGAGGATGATAGTAACTTAA+GGG - chr2_4:5100004-5100023 Msa0310260:intron 30.0%
AATTGAATCATCTTCAACTG+TGG - chr2_4:5100031-5100050 Msa0310260:intron 30.0%
!!! AGGTGATATTTTGACTTATG+TGG - chr2_4:5100409-5100428 Msa0310260:intron 30.0%
! TCAATGGACAATGTTGTTTA+CGG + chr2_4:5100440-5100459 None:intergenic 30.0%
TAGTTATTGTTCTGTTTGTC+AGG - chr2_4:5100469-5100488 Msa0310260:CDS 30.0%
TGATGTTGACATATCTGAAT+CGG - chr2_4:5100734-5100753 Msa0310260:intron 30.0%
TGATATTGCAAGAAGTGAAT+TGG - chr2_4:5101478-5101497 Msa0310260:intron 30.0%
! TGATAGCGAAACAAATGATA+TGG - chr2_4:5101538-5101557 Msa0310260:intron 30.0%
! TGCACTATAATCAACTTGTT+TGG + chr2_4:5101621-5101640 None:intergenic 30.0%
TGATGCCACAATAAATGAAT+TGG - chr2_4:5101757-5101776 Msa0310260:CDS 30.0%
TTGCACCAATTCATTTATTG+TGG + chr2_4:5101765-5101784 None:intergenic 30.0%
! TGATGCTGACAATATTGATT+TGG - chr2_4:5101850-5101869 Msa0310260:intron 30.0%
!! GAGTCTAAACAAGTTGATTA+TGG - chr2_4:5101890-5101909 Msa0310260:intron 30.0%
!! ACAAGTTGATTATAGTGCAA+CGG - chr2_4:5101622-5101641 Msa0310260:intron 30.0%
!! GTACTATAATTAGCTTGTTC+AGG + chr2_4:5102178-5102197 None:intergenic 30.0%
CAAGCTAATTATAGTACAAC+AGG - chr2_4:5102181-5102200 Msa0310260:intron 30.0%
TGAAATGAAAAAGTCAGCAT+TGG - chr2_4:5102321-5102340 Msa0310260:intron 30.0%
TTTATTTCCTTTCCTTATGG+AGG - chr2_4:5102349-5102368 Msa0310260:intron 30.0%
TTATTTCCTTTCCTTATGGA+GGG - chr2_4:5102350-5102369 Msa0310260:intron 30.0%
GCTATAATTCACACTTTACT+GGG - chr2_4:5102372-5102391 Msa0310260:intron 30.0%
! GTGTCAATTTTGTGTTTAGT+TGG - chr2_4:5102440-5102459 Msa0310260:intron 30.0%
TTGTGTTTAGTTGGATGATT+TGG - chr2_4:5102449-5102468 Msa0310260:intron 30.0%
TTGGCAAACAAAATAGATGT+TGG - chr2_4:5102486-5102505 Msa0310260:intron 30.0%
TTAGGTAAATGTATTCACAC+TGG - chr2_4:5102663-5102682 Msa0310260:intron 30.0%
TCGTTGAAAAGAAATGTTTC+TGG - chr2_4:5102703-5102722 Msa0310260:intron 30.0%
CGTTGAAAAGAAATGTTTCT+GGG - chr2_4:5102704-5102723 Msa0310260:intron 30.0%
! AACATTCTAGTTGCTGAATT+TGG - chr2_4:5102728-5102747 Msa0310260:intron 30.0%
AAAGTCTGAGAATGATATAG+AGG - chr2_4:5102770-5102789 Msa0310260:intron 30.0%
CAGGGAAAATATTTCAAGAA+CGG - chr2_4:5102964-5102983 Msa0310260:intron 30.0%
!! AAATTAGGGTACTGAAATTC+AGG + chr2_4:5103101-5103120 None:intergenic 30.0%
!!! CATTGCTTTTGTTTCTGTTT+TGG - chr2_4:5103268-5103287 Msa0310260:CDS 30.0%
GATTTGCAATTACATATTGC+GGG + chr2_4:5103526-5103545 None:intergenic 30.0%
TAAAATATAACAAGCGTAGG+CGG + chr2_4:5103568-5103587 None:intergenic 30.0%
TCCTACTAATAACATCTTTC+AGG - chr2_4:5103628-5103647 Msa0310260:CDS 30.0%
TCCTGAAAGATGTTATTAGT+AGG + chr2_4:5103632-5103651 None:intergenic 30.0%
! ATATTATTTCTCCCCTAAAC+TGG - chr2_4:5103675-5103694 Msa0310260:CDS 30.0%
!!! GAGTAAAGAGTATCTTTTCA+AGG - chr2_4:5103894-5103913 Msa0310260:CDS 30.0%
ACTGAAAAATACAAGATCAG+AGG + chr2_4:5103933-5103952 None:intergenic 30.0%
TAGACCAGAAATAATTATGC+AGG - chr2_4:5103968-5103987 Msa0310260:CDS 30.0%
AGACCAGAAATAATTATGCA+GGG - chr2_4:5103969-5103988 Msa0310260:CDS 30.0%
TAATACTGGAGTGTATATCA+GGG - chr2_4:5103994-5104013 Msa0310260:CDS 30.0%
!!! GTTTTGGTTGCTTATTTTGA+TGG - chr2_4:5104133-5104152 Msa0310260:CDS 30.0%
GCAGTACTATAACATAATTC+CGG + chr2_4:5104327-5104346 None:intergenic 30.0%
AACTAGGATAATTCCTCAAA+TGG + chr2_4:5104477-5104496 None:intergenic 30.0%
!! CATATAAAATCGGCTTGTAA+GGG - chr2_4:5104539-5104558 Msa0310260:CDS 30.0%
!! ATATAAAATCGGCTTGTAAG+GGG - chr2_4:5104540-5104559 Msa0310260:CDS 30.0%
GTCCAAACTTTATACTACTT+AGG - chr2_4:5104569-5104588 Msa0310260:CDS 30.0%
TTCAAAAGCTTAAGCTTCAA+AGG + chr2_4:5104932-5104951 None:intergenic 30.0%
TAAACAAAATCTATGTCTGC+CGG + chr2_4:5105092-5105111 None:intergenic 30.0%
!! CAGACATAGATTTTGTTTAC+TGG - chr2_4:5105093-5105112 Msa0310260:CDS 30.0%
TTTACTGGCAACTTAGATTT+AGG - chr2_4:5105108-5105127 Msa0310260:CDS 30.0%
TCGCCTTTAACTATATGTAT+CGG + chr2_4:5105312-5105331 None:intergenic 30.0%
TGTGAAAATGAGGAAATGTT+AGG + chr2_4:5105372-5105391 None:intergenic 30.0%
CATACTTCATTTGAACATTG+AGG - chr2_4:5105412-5105431 Msa0310260:CDS 30.0%
ATTGAGGCTCAAAATTATAG+AGG - chr2_4:5105428-5105447 Msa0310260:CDS 30.0%
! AACATATACGTATAACTTGC+AGG - chr2_4:5106230-5106249 Msa0310260:intron 30.0%
TGTAACTGTTATAGTGTCAT+TGG - chr2_4:5106377-5106396 Msa0310260:intron 30.0%
TACAGTAATAATCCCTACAT+AGG + chr2_4:5106525-5106544 None:intergenic 30.0%
TGAATGGAAAAGTTCCAAAA+GGG - chr2_4:5106679-5106698 Msa0310260:five_prime_UTR 30.0%
GAAATATATGTACATTCTGC+CGG - chr2_4:5106743-5106762 Msa0310260:five_prime_UTR 30.0%
TGGAGTAGAAAATGGAAGAA+GGG + chr2_4:5099258-5099277 None:intergenic 35.0%
TTGGAGTAGAAAATGGAAGA+AGG + chr2_4:5099259-5099278 None:intergenic 35.0%
! AGTTGAATTGAGAAGTGTAG+GGG + chr2_4:5099327-5099346 None:intergenic 35.0%
! GAAGTTGAATTGAGAAGTGT+AGG + chr2_4:5099329-5099348 None:intergenic 35.0%
AGTTCTTCATGTTCTTCTTG+AGG + chr2_4:5099368-5099387 None:intergenic 35.0%
AAACACCTCACTAACCAAAA+TGG + chr2_4:5099480-5099499 None:intergenic 35.0%
GAAAATCACACACCGTAATT+GGG + chr2_4:5099643-5099662 None:intergenic 35.0%
!! TGGTTTGTTCATCATACTTG+AGG - chr2_4:5099803-5099822 Msa0310260:intron 35.0%
GTGAACAAAAAACTTCCATC+CGG + chr2_4:5099852-5099871 None:intergenic 35.0%
!!! TGAAGAAGGTGTTAGTGTTT+TGG - chr2_4:5099950-5099969 Msa0310260:intron 35.0%
TGTTGAACAAATGAGCAATG+AGG - chr2_4:5099986-5100005 Msa0310260:intron 35.0%
GAGGATGATAGTAACTTAAG+GGG - chr2_4:5100005-5100024 Msa0310260:intron 35.0%
! GATGATAGTGATGATCAACA+TGG - chr2_4:5100197-5100216 Msa0310260:CDS 35.0%
TTCTCTTCAGTTTCCAAAGA+AGG + chr2_4:5100383-5100402 None:intergenic 35.0%
GAAACTGAAGAGAAAGAAGA+AGG - chr2_4:5100389-5100408 Msa0310260:intron 35.0%
TTGTTCCAATTCACTTCTGT+CGG + chr2_4:5100649-5100668 None:intergenic 35.0%
AATGCAAGAGAAAATCTGAC+TGG - chr2_4:5100798-5100817 Msa0310260:intron 35.0%
TGATGCCAAAACAAGTGAAT+CGG - chr2_4:5100827-5100846 Msa0310260:intron 35.0%
! GACTCTGAAGAAATTGATAC+TGG + chr2_4:5100855-5100874 None:intergenic 35.0%
! TTGTTCAGACTCTGAAAAAG+TGG + chr2_4:5101048-5101067 None:intergenic 35.0%
! TTTTCAGAGTCTGAACAAGA+TGG - chr2_4:5101050-5101069 Msa0310260:intron 35.0%
ATTGAAACAGACAATCTGAG+TGG - chr2_4:5101170-5101189 Msa0310260:intron 35.0%
AGTGAAACAGACAATCTTAC+TGG - chr2_4:5101263-5101282 Msa0310260:intron 35.0%
ATTATCCACTTCCTTGGAAT+CGG - chr2_4:5101412-5101431 Msa0310260:intron 35.0%
!! TTCGCTATCATTAGCTTGTA+CGG + chr2_4:5101528-5101547 None:intergenic 35.0%
! TTGTTTGGACTCTAAAGATG+TGG + chr2_4:5101606-5101625 None:intergenic 35.0%
! ATCAACTTGTTTGGACTCTA+AGG + chr2_4:5101612-5101631 None:intergenic 35.0%
! TGCACTGTAATCAACTTGTT+TGG + chr2_4:5101807-5101826 None:intergenic 35.0%
TAAAGAAGTGGATATTGGCA+CGG + chr2_4:5102059-5102078 None:intergenic 35.0%
ACTTAACTCGGTATCAACAA+CGG + chr2_4:5102125-5102144 None:intergenic 35.0%
!! ATTAGCTTGTTCAGGTTCTA+AGG + chr2_4:5102170-5102189 None:intergenic 35.0%
!! TGATACTGACTTATGTGAGT+CGG - chr2_4:5102222-5102241 Msa0310260:intron 35.0%
GGCTATAATTCACACTTTAC+TGG - chr2_4:5102371-5102390 Msa0310260:intron 35.0%
!! TATTTTGTTTGCCAAGTCTG+AGG + chr2_4:5102481-5102500 None:intergenic 35.0%
TCTGGTACCGTATTAAGTAT+TGG + chr2_4:5102540-5102559 None:intergenic 35.0%
ATCTGAACTGAATGTATCTC+TGG + chr2_4:5102558-5102577 None:intergenic 35.0%
AGAGATACATTCAGTTCAGA+TGG - chr2_4:5102557-5102576 Msa0310260:intron 35.0%
TTCTAATCCCTATTAATGCC+AGG + chr2_4:5103044-5103063 None:intergenic 35.0%
TAGGGATTAGAAATGAAGTC+AGG - chr2_4:5103052-5103071 Msa0310260:intron 35.0%
CAAGTACTCGCAGAAATTTA+TGG + chr2_4:5103334-5103353 None:intergenic 35.0%
GCTTGAATCCTTAAAGTAGA+TGG - chr2_4:5103598-5103617 Msa0310260:CDS 35.0%
AACTAACATTCTGTGCAGAA+AGG + chr2_4:5103745-5103764 None:intergenic 35.0%
CAAGTTCACAAATTACAACG+AGG + chr2_4:5103834-5103853 None:intergenic 35.0%
TCTTTACTCAGTCCAACAAA+TGG + chr2_4:5103883-5103902 None:intergenic 35.0%
CAAGATCAGAGGTTTGATAA+TGG + chr2_4:5103922-5103941 None:intergenic 35.0%
ACTCCCTGCATAATTATTTC+TGG + chr2_4:5103975-5103994 None:intergenic 35.0%
AATTATGCAGGGAGTAATAC+TGG - chr2_4:5103980-5103999 Msa0310260:CDS 35.0%
GTAATACTGGAGTGTATATC+AGG - chr2_4:5103993-5104012 Msa0310260:CDS 35.0%
GGTAGCTCAAATGAATGATA+AGG - chr2_4:5104212-5104231 Msa0310260:CDS 35.0%
AACAAAAACGTCACTCAATC+TGG + chr2_4:5104243-5104262 None:intergenic 35.0%
GACACAAACGTAATACTATG+AGG + chr2_4:5104297-5104316 None:intergenic 35.0%
TACGTTTGTGTCAATATGTC+CGG - chr2_4:5104305-5104324 Msa0310260:CDS 35.0%
! CAGAAGCATGTTAGATATGT+AGG + chr2_4:5104393-5104412 None:intergenic 35.0%
!! ATGTTTGTAAGTGCCATTTG+AGG - chr2_4:5104461-5104480 Msa0310260:CDS 35.0%
!! CCTTACAAGCCGATTTTATA+TGG + chr2_4:5104541-5104560 None:intergenic 35.0%
!! CCATATAAAATCGGCTTGTA+AGG - chr2_4:5104538-5104557 Msa0310260:CDS 35.0%
GGCCTAAGTAGTATAAAGTT+TGG + chr2_4:5104574-5104593 None:intergenic 35.0%
TGGATATTCCACTCTAATTG+AGG + chr2_4:5104711-5104730 None:intergenic 35.0%
CTTATACTAGATCAGCTGTT+GGG + chr2_4:5104785-5104804 None:intergenic 35.0%
GCCCAAGATAAATTCTAAGT+TGG + chr2_4:5104816-5104835 None:intergenic 35.0%
!!! CATTACACGGTGGTTTTAAA+TGG + chr2_4:5104848-5104867 None:intergenic 35.0%
AGCTTAAGCTTCAAAGGAAT+GGG + chr2_4:5104926-5104945 None:intergenic 35.0%
AAGCTTAAGCTTCAAAGGAA+TGG + chr2_4:5104927-5104946 None:intergenic 35.0%
AAATAACCGTTTCATTCGGA+AGG - chr2_4:5104950-5104969 Msa0310260:CDS 35.0%
! CTTTTTCCTTCCGAATGAAA+CGG + chr2_4:5104959-5104978 None:intergenic 35.0%
AAACAAAATCTATGTCTGCC+GGG + chr2_4:5105091-5105110 None:intergenic 35.0%
!!! GGCATTTGATGTTTTGAAGA+TGG + chr2_4:5105268-5105287 None:intergenic 35.0%
ATACCTCAATGATTTCTGAG+TGG + chr2_4:5105338-5105357 None:intergenic 35.0%
GAAAATGAGGAAATGTTAGG+AGG + chr2_4:5105369-5105388 None:intergenic 35.0%
TCTCAGATCATGTGAAAATG+AGG + chr2_4:5105382-5105401 None:intergenic 35.0%
TCAAAATTATAGAGGTGGCT+TGG - chr2_4:5105436-5105455 Msa0310260:CDS 35.0%
CTCAAAGCAAAATGTGTTTC+AGG - chr2_4:5105542-5105561 Msa0310260:CDS 35.0%
TACAAGATCGATCTAAACGA+TGG - chr2_4:5105567-5105586 Msa0310260:CDS 35.0%
! GATGGTGATGTGATTGTATT+TGG - chr2_4:5105585-5105604 Msa0310260:CDS 35.0%
GTGATTGTATTTGGCACAAA+TGG - chr2_4:5105594-5105613 Msa0310260:CDS 35.0%
GAAAAATAGACAGATCCAGA+TGG + chr2_4:5105725-5105744 None:intergenic 35.0%
AATTTGAACATGCGATCTCT+TGG - chr2_4:5105971-5105990 Msa0310260:intron 35.0%
!! CTCTACTTTTCTCTTCAACA+AGG + chr2_4:5106079-5106098 None:intergenic 35.0%
CTAACAAGTTAGCAATAGGT+TGG + chr2_4:5106147-5106166 None:intergenic 35.0%
CAAGCTAACAAGTTAGCAAT+AGG + chr2_4:5106151-5106170 None:intergenic 35.0%
!! CTATTGCTAACTTGTTAGCT+TGG - chr2_4:5106149-5106168 Msa0310260:intron 35.0%
! TTGTTAGCTTGGCAAAATCA+TGG - chr2_4:5106160-5106179 Msa0310260:intron 35.0%
TACCATGTGCTTAAAACATC+TGG - chr2_4:5106196-5106215 Msa0310260:intron 35.0%
!! TACCAGATGTTTTAAGCACA+TGG + chr2_4:5106201-5106220 None:intergenic 35.0%
GCAGGAAATAGCAGAAATAT+TGG - chr2_4:5106248-5106267 Msa0310260:intron 35.0%
CAGTATCATGTTTACCAAAC+TGG + chr2_4:5106471-5106490 None:intergenic 35.0%
GTAATAATCCCTACATAGGT+GGG + chr2_4:5106521-5106540 None:intergenic 35.0%
AGTAATAATCCCTACATAGG+TGG + chr2_4:5106522-5106541 None:intergenic 35.0%
ATGAGAATAGACAATGGATG+AGG + chr2_4:5106638-5106657 None:intergenic 35.0%
CTGAATGGAAAAGTTCCAAA+AGG - chr2_4:5106678-5106697 Msa0310260:five_prime_UTR 35.0%
! ATGCATTTGATTCTCCCTTT+TGG + chr2_4:5106696-5106715 None:intergenic 35.0%
AGGGAGAATCAAATGCATTA+TGG - chr2_4:5106698-5106717 Msa0310260:five_prime_UTR 35.0%
GAAGCTTCTTGAGAATAGGT+TGG + chr2_4:5099177-5099196 None:intergenic 40.0%
AGTGGAAGCTTCTTGAGAAT+AGG + chr2_4:5099181-5099200 None:intergenic 40.0%
TGGTTTAGGAGAAGGAAGAT+TGG + chr2_4:5099222-5099241 None:intergenic 40.0%
AATGGAAGAAGGGTTTGAGA+AGG + chr2_4:5099248-5099267 None:intergenic 40.0%
! TGAAGAATCTTCTGGGAAGT+GGG + chr2_4:5099283-5099302 None:intergenic 40.0%
GTGAAGGTGAAGAATCTTCT+GGG + chr2_4:5099290-5099309 None:intergenic 40.0%
ATGTTCTTCTTGAGGAGAAG+GGG + chr2_4:5099360-5099379 None:intergenic 40.0%
CATGTTCTTCTTGAGGAGAA+GGG + chr2_4:5099361-5099380 None:intergenic 40.0%
TCATGTTCTTCTTGAGGAGA+AGG + chr2_4:5099362-5099381 None:intergenic 40.0%
CTTGATGTCATCTCTTCAAC+TGG - chr2_4:5099386-5099405 Msa0310260:exon 40.0%
GAACCTGCAATTCCCAATTA+CGG - chr2_4:5099628-5099647 Msa0310260:intron 40.0%
CGAAAATCACACACCGTAAT+TGG + chr2_4:5099644-5099663 None:intergenic 40.0%
!!! AGTGTTTTGGCAACTGATGA+TGG - chr2_4:5099963-5099982 Msa0310260:intron 40.0%
TCATCTTCAACTGTGGTAGT+TGG - chr2_4:5100038-5100057 Msa0310260:intron 40.0%
ACTTGCAAGTCATTGATCAC+AGG + chr2_4:5100146-5100165 None:intergenic 40.0%
GAGGAAGAAGATTCTCAAGT+TGG - chr2_4:5100281-5100300 Msa0310260:intron 40.0%
! GTGTTTTCTGATCTGAGTAG+TGG - chr2_4:5100356-5100375 Msa0310260:intron 40.0%
TGTTCTGTTTGTCAGGTAGA+AGG - chr2_4:5100476-5100495 Msa0310260:CDS 40.0%
CATCTCTCTACAGTTGACAA+TGG - chr2_4:5100516-5100535 Msa0310260:CDS 40.0%
AGTTGACAATGGCAATAGTG+TGG - chr2_4:5100527-5100546 Msa0310260:CDS 40.0%
!! GTATCCACTTCTTTAGAGTC+TGG - chr2_4:5100612-5100631 Msa0310260:intron 40.0%
! ACTACCAGACTCTAAAGAAG+TGG + chr2_4:5100619-5100638 None:intergenic 40.0%
AGTGCAACAGACAATCTTAG+TGG - chr2_4:5100705-5100724 Msa0310260:intron 40.0%
! TTGTTCAGACTCTGAAGAAG+TGG + chr2_4:5100769-5100788 None:intergenic 40.0%
! CTGTACTGACATAAGTGAAC+TGG - chr2_4:5100920-5100939 Msa0310260:intron 40.0%
TTGCTCAGACTGTAAAGAAG+TGG + chr2_4:5100955-5100974 None:intergenic 40.0%
TCTTTACAGTCTGAGCAAGA+TGG - chr2_4:5100957-5100976 Msa0310260:intron 40.0%
ATTGCAACAGACAATCTGAC+TGG - chr2_4:5100984-5101003 Msa0310260:intron 40.0%
TTGTTCAGACTCTATGGTAG+TGG + chr2_4:5101141-5101160 None:intergenic 40.0%
ACCATAGAGTCTGAACAAGT+TGG - chr2_4:5101143-5101162 Msa0310260:intron 40.0%
! ACCAACTTGTTCAGACTCTA+TGG + chr2_4:5101147-5101166 None:intergenic 40.0%
CGATGCTGAAATGAGTGATT+TGG - chr2_4:5101199-5101218 Msa0310260:intron 40.0%
!! TTCTTCAGACTCTAAGGTAG+TGG + chr2_4:5101234-5101253 None:intergenic 40.0%
ACCTTAGAGTCTGAAGAAGT+TGG - chr2_4:5101236-5101255 Msa0310260:intron 40.0%
ACCAACTTCTTCAGACTCTA+AGG + chr2_4:5101240-5101259 None:intergenic 40.0%
TTGTTCAGAGTCTGAAGAAG+TGG + chr2_4:5101327-5101346 None:intergenic 40.0%
GATTCCAAGGAAGTGGATAA+TGG + chr2_4:5101413-5101432 None:intergenic 40.0%
CAATATCAAGACTGCCAGTT+AGG + chr2_4:5101466-5101485 None:intergenic 40.0%
! GACTCTAAAGAGAAGGATTC+TGG + chr2_4:5101506-5101525 None:intergenic 40.0%
! TTGTACGGACTCTAAAGAGA+AGG + chr2_4:5101513-5101532 None:intergenic 40.0%
AGCGAAACAAATGATATGGC+TGG - chr2_4:5101542-5101561 Msa0310260:intron 40.0%
TTATAGTGCAACAGACGATC+TGG - chr2_4:5101631-5101650 Msa0310260:intron 40.0%
! GACTCTAAAGAAGTCGACAT+TGG + chr2_4:5101692-5101711 None:intergenic 40.0%
! TTGTTTGGACTCTAAGGAAG+GGG + chr2_4:5101792-5101811 None:intergenic 40.0%
! CTTGTTTGGACTCTAAGGAA+GGG + chr2_4:5101793-5101812 None:intergenic 40.0%
! ACTTGTTTGGACTCTAAGGA+AGG + chr2_4:5101794-5101813 None:intergenic 40.0%
TTACAGTGCAACAGACAATC+TGG - chr2_4:5100701-5100720 Msa0310260:intron 40.0%
! CTGACTGGTAATGTTGATGA+CGG - chr2_4:5101926-5101945 Msa0310260:intron 40.0%
GGTTCAGAGTCTAAAGAAGT+CGG + chr2_4:5101977-5101996 None:intergenic 40.0%
GAAACAATCCACCAGATTGA+TGG - chr2_4:5102010-5102029 Msa0310260:intron 40.0%
TGTTGATGCTGAGTTTAGTG+AGG - chr2_4:5102033-5102052 Msa0310260:intron 40.0%
GCCAATATCCACTTCTTTAG+AGG - chr2_4:5102060-5102079 Msa0310260:intron 40.0%
! GCCTCTAAAGAAGTGGATAT+TGG + chr2_4:5102064-5102083 None:intergenic 40.0%
! TTGTTCAGCCTCTAAAGAAG+TGG + chr2_4:5102071-5102090 None:intergenic 40.0%
TGATACCGAGTTAAGTGAAC+CGG - chr2_4:5102129-5102148 Msa0310260:CDS 40.0%
!! GGTTCTAAGGAAGTGGATAA+TGG + chr2_4:5102157-5102176 None:intergenic 40.0%
!! TTGTTCAGGTTCTAAGGAAG+TGG + chr2_4:5102164-5102183 None:intergenic 40.0%
TTATAGCCCTCCATAAGGAA+AGG + chr2_4:5102359-5102378 None:intergenic 40.0%
GTGAATTATAGCCCTCCATA+AGG + chr2_4:5102364-5102383 None:intergenic 40.0%
!! GCTCATCAAACCCTTTTTCA+TGG - chr2_4:5102912-5102931 Msa0310260:intron 40.0%
!!! ACGGAGCTTTTTCTAGTTTC+TGG - chr2_4:5102983-5103002 Msa0310260:intron 40.0%
AATCCCTATTAATGCCAGGA+CGG + chr2_4:5103040-5103059 None:intergenic 40.0%
! ATTTTGCTAGGGCATAATGC+AGG - chr2_4:5103151-5103170 Msa0310260:intron 40.0%
! TTTTGCTAGGGCATAATGCA+GGG - chr2_4:5103152-5103171 Msa0310260:intron 40.0%
AGTGTATATCAGGGAACTCA+TGG - chr2_4:5104003-5104022 Msa0310260:CDS 40.0%
GTGTATATCAGGGAACTCAT+GGG - chr2_4:5104004-5104023 Msa0310260:CDS 40.0%
CTTCTGATAAGAACTTCTGC+AGG + chr2_4:5104079-5104098 None:intergenic 40.0%
!!! GGTTGCTTATTTTGATGGAC+TGG - chr2_4:5104138-5104157 Msa0310260:CDS 40.0%
TTCATTGTGTTGGGTGTGAA+GGG + chr2_4:5104627-5104646 None:intergenic 40.0%
TCCAACACCTTCATTGTGTT+GGG + chr2_4:5104636-5104655 None:intergenic 40.0%
ACAACCCAAATGCAGCAATT+AGG - chr2_4:5104671-5104690 Msa0310260:CDS 40.0%
GCTTATACTAGATCAGCTGT+TGG + chr2_4:5104786-5104805 None:intergenic 40.0%
AGGGCAGTTCTTACATTACA+CGG + chr2_4:5104861-5104880 None:intergenic 40.0%
TGTAATGTAAGAACTGCCCT+TGG - chr2_4:5104861-5104880 Msa0310260:CDS 40.0%
AGAACTGCCCTTGGTTTATA+AGG - chr2_4:5104870-5104889 Msa0310260:CDS 40.0%
TTCGGAAGGAAAAAGCAAAG+AGG - chr2_4:5104964-5104983 Msa0310260:CDS 40.0%
TGACGTGCAAAACAATGGTT+TGG + chr2_4:5104990-5105009 None:intergenic 40.0%
CTTCATGACGTGCAAAACAA+TGG + chr2_4:5104995-5105014 None:intergenic 40.0%
TGTGCAGTTAAATAAGCTGC+TGG - chr2_4:5105048-5105067 Msa0310260:CDS 40.0%
AACAAAATCTATGTCTGCCG+GGG + chr2_4:5105090-5105109 None:intergenic 40.0%
GAGGCTCAAAATTATAGAGG+TGG - chr2_4:5105431-5105450 Msa0310260:CDS 40.0%
! AAATTATAGAGGTGGCTTGG+AGG - chr2_4:5105439-5105458 Msa0310260:CDS 40.0%
! GATGGAATTTGAAACACGTG+TGG + chr2_4:5105837-5105856 None:intergenic 40.0%
ATTGGTAAGGTTGCTACCTT+GGG + chr2_4:5105998-5106017 None:intergenic 40.0%
TACATAGGTGGGAAGTTCAT+TGG + chr2_4:5106510-5106529 None:intergenic 40.0%
AATGAACTTCCCACCTATGT+AGG - chr2_4:5106509-5106528 Msa0310260:CDS 40.0%
ATGAACTTCCCACCTATGTA+GGG - chr2_4:5106510-5106529 Msa0310260:CDS 40.0%
AGAATAGACAATGGATGAGG+TGG + chr2_4:5106635-5106654 None:intergenic 40.0%
CAAGAAGCTTCCACTGTCTA+TGG - chr2_4:5099186-5099205 Msa0310260:three_prime_UTR 45.0%
AGCATGGAAACCATAGACAG+TGG + chr2_4:5099199-5099218 None:intergenic 45.0%
! GTTTGAGAAGGTGGTGGTTT+AGG + chr2_4:5099236-5099255 None:intergenic 45.0%
AGTGGGGTTGGAGTAGAAAA+TGG + chr2_4:5099266-5099285 None:intergenic 45.0%
! GAAGAATCTTCTGGGAAGTG+GGG + chr2_4:5099282-5099301 None:intergenic 45.0%
! GTGAAGAATCTTCTGGGAAG+TGG + chr2_4:5099284-5099303 None:intergenic 45.0%
GGTGAAGGTGAAGAATCTTC+TGG + chr2_4:5099291-5099310 None:intergenic 45.0%
! AATTGAGAAGTGTAGGGGTG+TGG + chr2_4:5099322-5099341 None:intergenic 45.0%
ACACCGTAATTGGGAATTGC+AGG + chr2_4:5099634-5099653 None:intergenic 45.0%
! GTTTGCTTTGACAGAGCATC+CGG - chr2_4:5099830-5099849 Msa0310260:intron 45.0%
AAACAGAAACTCGTGCCTGA+GGG - chr2_4:5099918-5099937 Msa0310260:intron 45.0%
TCTTCATCAACAACACCCTC+AGG + chr2_4:5099936-5099955 None:intergenic 45.0%
!! GAGGGTGTTGTTGATGAAGA+AGG - chr2_4:5099936-5099955 Msa0310260:intron 45.0%
! TCGTTTTCACTCTCGAGAAG+CGG + chr2_4:5100083-5100102 None:intergenic 45.0%
TCTTCTTCCTCAGACACACT+CGG + chr2_4:5100272-5100291 None:intergenic 45.0%
GAAAACACATCTGACTCTGC+TGG + chr2_4:5100344-5100363 None:intergenic 45.0%
TCTGAGTAGTGGTCCTTCTT+TGG - chr2_4:5100367-5100386 Msa0310260:intron 45.0%
AGTGTGGATAGAGCAGCAAA+CGG - chr2_4:5100543-5100562 Msa0310260:CDS 45.0%
!! TGCTGCTGACTTGACTGAAT+TGG - chr2_4:5100584-5100603 Msa0310260:CDS 45.0%
!! TGCTGACTTGACTGAATTGG+TGG - chr2_4:5100587-5100606 Msa0310260:CDS 45.0%
TGATGCCGACAGAAGTGAAT+TGG - chr2_4:5100641-5100660 Msa0310260:intron 45.0%
! TTGCTCGGTCTCTAAAGAAG+TGG + chr2_4:5100676-5100695 None:intergenic 45.0%
! TCTTTAGAGACCGAGCAAGA+TGG - chr2_4:5100678-5100697 Msa0310260:intron 45.0%
TGCACTGTAACCATCTTGCT+CGG + chr2_4:5100691-5100710 None:intergenic 45.0%
!!! TGGCACCGATTCACTTGTTT+TGG + chr2_4:5100835-5100854 None:intergenic 45.0%
TCTTCAGAGTCAGAGCAAGT+TGG - chr2_4:5100864-5100883 Msa0310260:intron 45.0%
!! GAGTCAGAGCAAGTTGGTTA+TGG - chr2_4:5100870-5100889 Msa0310260:intron 45.0%
TGACATAACTGAATCTGCGC+TGG - chr2_4:5101019-5101038 Msa0310260:intron 45.0%
AGTGCAACAAGCAATCTGAC+TGG - chr2_4:5101077-5101096 Msa0310260:intron 45.0%
!! GACTCTATGGTAGTGGATAC+TGG + chr2_4:5101134-5101153 None:intergenic 45.0%
!! GACTCTAAGGTAGTGGATAC+TGG + chr2_4:5101227-5101246 None:intergenic 45.0%
GAGTCTGAAGAAGTGGATAC+TGG + chr2_4:5101320-5101339 None:intergenic 45.0%
AGAGCAACAGACAATGAGAC+TGG - chr2_4:5101356-5101375 Msa0310260:intron 45.0%
!! AGTGTCGATCCTGACATGAA+TGG - chr2_4:5101380-5101399 Msa0310260:intron 45.0%
! TGTGCCATTATCCACTTCCT+TGG - chr2_4:5101406-5101425 Msa0310260:intron 45.0%
TTGTTCCGATTCCAAGGAAG+TGG + chr2_4:5101420-5101439 None:intergenic 45.0%
!! ATCGACTTGTTCCGATTCCA+AGG + chr2_4:5101426-5101445 None:intergenic 45.0%
AGTGCAACAGACAACCTAAC+TGG - chr2_4:5101449-5101468 Msa0310260:intron 45.0%
CGTCATCAACATTACCAGTC+AGG + chr2_4:5101928-5101947 None:intergenic 45.0%
TGACGGCATAACAAGTGAGT+TGG - chr2_4:5101943-5101962 Msa0310260:intron 45.0%
GAGTCTAAAGAAGTCGGTAC+TGG + chr2_4:5101971-5101990 None:intergenic 45.0%
CATCAACACCATCAATCTGG+TGG + chr2_4:5102021-5102040 None:intergenic 45.0%
CAGCATCAACACCATCAATC+TGG + chr2_4:5102024-5102043 None:intergenic 45.0%
! AAGGAAGTGGATAATGGCAC+CGG + chr2_4:5101407-5101426 None:intergenic 45.0%
AGTACAACAGGCAACTTGAC+AGG - chr2_4:5102193-5102212 Msa0310260:intron 45.0%
! GCACCGGTATCTACTTCTTT+GGG - chr2_4:5102244-5102263 Msa0310260:intron 45.0%
CACCGGTATCTACTTCTTTG+GGG - chr2_4:5102245-5102264 Msa0310260:intron 45.0%
GACCCCAAAGAAGTAGATAC+CGG + chr2_4:5102250-5102269 None:intergenic 45.0%
TGAAAGAAATCGCCATGTCG+TGG - chr2_4:5102279-5102298 Msa0310260:intron 45.0%
! TTTGGTTCCATCCTCAGACT+TGG - chr2_4:5102467-5102486 Msa0310260:intron 45.0%
TTGTTTGCCAAGTCTGAGGA+TGG + chr2_4:5102477-5102496 None:intergenic 45.0%
TCAGTTCAGATGGCTAGTGA+TGG - chr2_4:5102567-5102586 Msa0310260:intron 45.0%
CAGTTCAGATGGCTAGTGAT+GGG - chr2_4:5102568-5102587 Msa0310260:intron 45.0%
ACGTTTGCTCTTTCTGCACA+CGG - chr2_4:5102626-5102645 Msa0310260:intron 45.0%
ACGGTCTTCAGTATGTGGTT+AGG - chr2_4:5102645-5102664 Msa0310260:intron 45.0%
CCAGCAAGAGCCATGAAAAA+GGG + chr2_4:5102925-5102944 None:intergenic 45.0%
ACCAGCAAGAGCCATGAAAA+AGG + chr2_4:5102926-5102945 None:intergenic 45.0%
GTACCGTCCTGGCATTAATA+GGG - chr2_4:5103034-5103053 Msa0310260:intron 45.0%
!! CTAGGAGTACTTGTGTGTCT+TGG - chr2_4:5103411-5103430 Msa0310260:intron 45.0%
AGCCACAACTAGCCAGTTTA+GGG + chr2_4:5103690-5103709 None:intergenic 45.0%
! TCCAGGGTCATCTTCTGTTT+TGG - chr2_4:5104117-5104136 Msa0310260:CDS 45.0%
ACCAAAACAGAAGATGACCC+TGG + chr2_4:5104121-5104140 None:intergenic 45.0%
GCCATATCTCGAGACAATGT+GGG - chr2_4:5104591-5104610 Msa0310260:CDS 45.0%
TCCCACATTGTCTCGAGATA+TGG + chr2_4:5104595-5104614 None:intergenic 45.0%
CTTCATTGTGTTGGGTGTGA+AGG + chr2_4:5104628-5104647 None:intergenic 45.0%
CTTCACACCCAACACAATGA+AGG - chr2_4:5104626-5104645 Msa0310260:CDS 45.0%
! ACCCAACACAATGAAGGTGT+TGG - chr2_4:5104632-5104651 Msa0310260:CDS 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr2_4:5104637-5104656 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr2_4:5104635-5104654 Msa0310260:CDS 45.0%
ACCCAAATGCAGCAATTAGG+TGG - chr2_4:5104674-5104693 Msa0310260:CDS 45.0%
GCCACCTAATTGCTGCATTT+GGG + chr2_4:5104678-5104697 None:intergenic 45.0%
AGCCACCTAATTGCTGCATT+TGG + chr2_4:5104679-5104698 None:intergenic 45.0%
AATGCAGCAATTAGGTGGCT+AGG - chr2_4:5104679-5104698 Msa0310260:CDS 45.0%
ATGCAGCAATTAGGTGGCTA+GGG - chr2_4:5104680-5104699 Msa0310260:CDS 45.0%
GTCAACACTCCAAGCTCAAT+GGG + chr2_4:5104751-5104770 None:intergenic 45.0%
GCAGTTCTTACATTACACGG+TGG + chr2_4:5104858-5104877 None:intergenic 45.0%
GTGTCCCATTAGTTAATCCC+CGG - chr2_4:5105070-5105089 Msa0310260:CDS 45.0%
TCTGCCGGGGATTAACTAAT+GGG + chr2_4:5105077-5105096 None:intergenic 45.0%
CGACCACTCAGAAATCATTG+AGG - chr2_4:5105332-5105351 Msa0310260:intron 45.0%
GAGAATCAACCTCAGGTTTC+AGG + chr2_4:5105683-5105702 None:intergenic 45.0%
TAAAGGCGAGAATCAACCTC+AGG + chr2_4:5105690-5105709 None:intergenic 45.0%
! AGTAGTCTTACCACCACAAG+TGG - chr2_4:5105932-5105951 Msa0310260:CDS 45.0%
CATTGGTAAGGTTGCTACCT+TGG + chr2_4:5105999-5106018 None:intergenic 45.0%
! AGAGCTTTGACGCATTGGTA+AGG + chr2_4:5106011-5106030 None:intergenic 45.0%
! AAGGAAGAGCTTTGACGCAT+TGG + chr2_4:5106016-5106035 None:intergenic 45.0%
AGCAGAAATATTGGCGACGA+CGG - chr2_4:5106257-5106276 Msa0310260:intron 45.0%
AGATCCACTAGAAGTCCCTT+TGG - chr2_4:5106300-5106319 Msa0310260:intron 45.0%
ATCACCAAAGGGACTTCTAG+TGG + chr2_4:5106307-5106326 None:intergenic 45.0%
! TTAGGCTATGTGGGTTATGC+AGG - chr2_4:5106339-5106358 Msa0310260:intron 45.0%
ACCTGCACATACAACCAGTT+TGG - chr2_4:5106454-5106473 Msa0310260:CDS 45.0%
ACCAAACTGGTTGTATGTGC+AGG + chr2_4:5106458-5106477 None:intergenic 45.0%
!! TTAAAAAATAAATAATAGAA+TGG - chr2_4:5106586-5106605 Msa0310260:CDS 5.0%
GGAGAAGGAAGATTGGAGCA+TGG + chr2_4:5099215-5099234 None:intergenic 50.0%
! GAAGGTGGTGGTTTAGGAGA+AGG + chr2_4:5099230-5099249 None:intergenic 50.0%
AGAAGGGTTTGAGAAGGTGG+TGG + chr2_4:5099242-5099261 None:intergenic 50.0%
GGAAGAAGGGTTTGAGAAGG+TGG + chr2_4:5099245-5099264 None:intergenic 50.0%
! AATCTTCTGGGAAGTGGGGT+TGG + chr2_4:5099278-5099297 None:intergenic 50.0%
CAAACAGAAACTCGTGCCTG+AGG - chr2_4:5099917-5099936 Msa0310260:intron 50.0%
! TTTTCACTCTCGAGAAGCGG+AGG + chr2_4:5100080-5100099 None:intergenic 50.0%
ATCACAGGTGTCTCACTCTC+AGG + chr2_4:5100131-5100150 None:intergenic 50.0%
TGTTGTTCCGAGTGTGTCTG+AGG - chr2_4:5100262-5100281 Msa0310260:intron 50.0%
! GACTCTGAAGAAGTGGACTC+TGG + chr2_4:5100762-5100781 None:intergenic 50.0%
GGTGCAACAGACAATGTGAC+TGG - chr2_4:5100891-5100910 Msa0310260:intron 50.0%
GGCACAACTCCATTCATGTC+AGG + chr2_4:5101392-5101411 None:intergenic 50.0%
AGTGCAACAGACAACCTGAC+TGG - chr2_4:5101728-5101747 Msa0310260:CDS 50.0%
AGTGCAACAGACAATCTGGC+TGG - chr2_4:5101821-5101840 Msa0310260:intron 50.0%
!! TGGCACCGGTTCACTTAACT+CGG + chr2_4:5102137-5102156 None:intergenic 50.0%
ACAACAGGCAACTTGACAGG+CGG - chr2_4:5102196-5102215 Msa0310260:intron 50.0%
TGACTTATGTGAGTCGGCAC+CGG - chr2_4:5102228-5102247 Msa0310260:intron 50.0%
!! GGCACCGGTATCTACTTCTT+TGG - chr2_4:5102243-5102262 Msa0310260:intron 50.0%
CAACTGAGTCATCCACGACA+TGG + chr2_4:5102294-5102313 None:intergenic 50.0%
TGCACACGGTCTTCAGTATG+TGG - chr2_4:5102640-5102659 Msa0310260:intron 50.0%
!! CCCTTTTTCATGGCTCTTGC+TGG - chr2_4:5102922-5102941 Msa0310260:intron 50.0%
GGTACCGTCCTGGCATTAAT+AGG - chr2_4:5103033-5103052 Msa0310260:intron 50.0%
!! TCTTGGTTTGTCCTCAGCTG+TGG - chr2_4:5103428-5103447 Msa0310260:intron 50.0%
!! CTTGGTTTGTCCTCAGCTGT+GGG - chr2_4:5103429-5103448 Msa0310260:intron 50.0%
GATGCTAAATCCCACAGCTG+AGG + chr2_4:5103442-5103461 None:intergenic 50.0%
! TCCCCTAAACTGGCTAGTTG+TGG - chr2_4:5103685-5103704 Msa0310260:CDS 50.0%
GCCACAACTAGCCAGTTTAG+GGG + chr2_4:5103689-5103708 None:intergenic 50.0%
CAGCCACAACTAGCCAGTTT+AGG + chr2_4:5103691-5103710 None:intergenic 50.0%
! AACTGGCTAGTTGTGGCTGA+TGG - chr2_4:5103692-5103711 Msa0310260:CDS 50.0%
CTAGTTGTGGCTGATGGAGT+TGG - chr2_4:5103698-5103717 Msa0310260:CDS 50.0%
GTTGGTCAGTGGTCACTTGA+AGG - chr2_4:5103716-5103735 Msa0310260:CDS 50.0%
ACCGCTGAAACACATTCTCC+AGG - chr2_4:5104100-5104119 Msa0310260:CDS 50.0%
CCCTGGAGAATGTGTTTCAG+CGG + chr2_4:5104104-5104123 None:intergenic 50.0%
CCGCTGAAACACATTCTCCA+GGG - chr2_4:5104101-5104120 Msa0310260:CDS 50.0%
GGCCATATCTCGAGACAATG+TGG - chr2_4:5104590-5104609 Msa0310260:CDS 50.0%
TTGTGTTGGGTGTGAAGGGT+AGG + chr2_4:5104623-5104642 None:intergenic 50.0%
TGCAGCAATTAGGTGGCTAG+GGG - chr2_4:5104681-5104700 Msa0310260:CDS 50.0%
TATCCAACCCTCTCACATCG+AGG - chr2_4:5104725-5104744 Msa0310260:CDS 50.0%
CGTCAACACTCCAAGCTCAA+TGG + chr2_4:5104752-5104771 None:intergenic 50.0%
GTCTGCCGGGGATTAACTAA+TGG + chr2_4:5105078-5105097 None:intergenic 50.0%
TGTTCCCAACGTTAGCTGCA+TGG + chr2_4:5105218-5105237 None:intergenic 50.0%
! ACAAGCTAGCCTGAAACCTG+AGG - chr2_4:5105671-5105690 Msa0310260:CDS 50.0%
TCTTACCACCACAAGTGGAG+AGG - chr2_4:5105937-5105956 Msa0310260:CDS 50.0%
AAAAGCCTCTCCACTTGTGG+TGG + chr2_4:5105945-5105964 None:intergenic 50.0%
CACAAAAGCCTCTCCACTTG+TGG + chr2_4:5105948-5105967 None:intergenic 50.0%
!! AGCTCAGGCTTTAGGCTATG+TGG - chr2_4:5106329-5106348 Msa0310260:intron 50.0%
!! GCTCAGGCTTTAGGCTATGT+GGG - chr2_4:5106330-5106349 Msa0310260:intron 50.0%
GGTGTGGTGAGTAGTGGTGA+AGG + chr2_4:5099306-5099325 None:intergenic 55.0%
! TGTAGGGGTGTGGTGAGTAG+TGG + chr2_4:5099312-5099331 None:intergenic 55.0%
! GCTTTGACAGAGCATCCGGA+TGG - chr2_4:5099834-5099853 Msa0310260:intron 55.0%
AGTGCAACAGACGATCTGGC+TGG - chr2_4:5101635-5101654 Msa0310260:intron 55.0%
GGTGCAACTGACAACCTGAC+TGG - chr2_4:5101911-5101930 Msa0310260:intron 55.0%
CGGTATCAACAACGGCAGTC+AGG + chr2_4:5102117-5102136 None:intergenic 55.0%
TTGCTTGCCTCATCCCTCTG+AGG - chr2_4:5103012-5103031 Msa0310260:intron 55.0%
! TGGCTGATGGAGTTGGTCAG+TGG - chr2_4:5103705-5103724 Msa0310260:CDS 55.0%
GCAATTAGGTGGCTAGGGGA+AGG - chr2_4:5104685-5104704 Msa0310260:CDS 55.0%
GGGGAAGGCCTCAATTAGAG+TGG - chr2_4:5104700-5104719 Msa0310260:CDS 55.0%
CAATGGGCCTCGATGTGAGA+GGG + chr2_4:5104735-5104754 None:intergenic 55.0%
TCAATGGGCCTCGATGTGAG+AGG + chr2_4:5104736-5104755 None:intergenic 55.0%
ACATCGAGGCCCATTGAGCT+TGG - chr2_4:5104739-5104758 Msa0310260:CDS 55.0%
CCCAACGTTAGCTGCATGGA+GGG + chr2_4:5105214-5105233 None:intergenic 55.0%
CCCTCCATGCAGCTAACGTT+GGG - chr2_4:5105211-5105230 Msa0310260:CDS 55.0%
TCCCAACGTTAGCTGCATGG+AGG + chr2_4:5105215-5105234 None:intergenic 55.0%
GCAGCTAACGTTGGGAACAC+TGG - chr2_4:5105219-5105238 Msa0310260:CDS 55.0%
! AAAGTGTGGCCTTGAGCGCT+AGG - chr2_4:5105874-5105893 Msa0310260:CDS 55.0%
CTCTTCAGACCCCACTTGGT+GGG + chr2_4:5105902-5105921 None:intergenic 55.0%
CACCAAGTGGGGTCTGAAGA+GGG - chr2_4:5105901-5105920 Msa0310260:CDS 55.0%
TACCCTCTTCAGACCCCACT+TGG + chr2_4:5105906-5105925 None:intergenic 55.0%
CATGCGATCTCTTGGTCCCA+AGG - chr2_4:5105979-5105998 Msa0310260:intron 55.0%
!! TCCCTTTGGTGATGCAGCTC+AGG - chr2_4:5106314-5106333 Msa0310260:intron 55.0%
GCCTGAGCTGCATCACCAAA+GGG + chr2_4:5106318-5106337 None:intergenic 55.0%
AGCCTGAGCTGCATCACCAA+AGG + chr2_4:5106319-5106338 None:intergenic 55.0%
GGTGATGCAGCTCAGGCTTT+AGG - chr2_4:5106321-5106340 Msa0310260:intron 55.0%
! GGCTATGTGGGTTATGCAGG+TGG - chr2_4:5106342-5106361 Msa0310260:intron 55.0%
AGAGCAGCAAACGGCGTAGC+AGG - chr2_4:5100552-5100571 Msa0310260:CDS 60.0%
TGGCATCAGCACTGCCAGTC+AGG + chr2_4:5101745-5101764 None:intergenic 60.0%
GACGGTACCTCAGAGGGATG+AGG + chr2_4:5103022-5103041 None:intergenic 60.0%
!! ATCCCTCTGAGGTACCGTCC+TGG - chr2_4:5103023-5103042 Msa0310260:intron 60.0%
TGCCAGGACGGTACCTCAGA+GGG + chr2_4:5103028-5103047 None:intergenic 60.0%
ATGCCAGGACGGTACCTCAG+AGG + chr2_4:5103029-5103048 None:intergenic 60.0%
GCCCTCCATGCAGCTAACGT+TGG - chr2_4:5105210-5105229 Msa0310260:CDS 60.0%
CCTCTTCAGACCCCACTTGG+TGG + chr2_4:5105903-5105922 None:intergenic 60.0%
CCACCAAGTGGGGTCTGAAG+AGG - chr2_4:5105900-5105919 Msa0310260:CDS 60.0%
ATTGGCGACGACGGCACAAG+AGG - chr2_4:5106266-5106285 Msa0310260:intron 60.0%
GCAGCAAACGGCGTAGCAGG+TGG - chr2_4:5100555-5100574 Msa0310260:CDS 65.0%
GGGCCTCGATGTGAGAGGGT+TGG + chr2_4:5104731-5104750 None:intergenic 65.0%
TGGTGGGAGCCTAGCGCTCA+AGG + chr2_4:5105886-5105905 None:intergenic 65.0%
AGCGCTAGGCTCCCACCAAG+TGG - chr2_4:5105888-5105907 Msa0310260:CDS 65.0%
GCGCTAGGCTCCCACCAAGT+GGG - chr2_4:5105889-5105908 Msa0310260:CDS 65.0%
CGCTAGGCTCCCACCAAGTG+GGG - chr2_4:5105890-5105909 Msa0310260:CDS 65.0%
GCGACGACGGCACAAGAGGT+TGG - chr2_4:5106270-5106289 Msa0310260:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 5099040 5106776 5099040 ID=Msa0310260;Name=Msa0310260
chr2_4 mRNA 5099040 5106776 5099040 ID=Msa0310260-mRNA-1;Parent=Msa0310260;Name=Msa0310260-mRNA-1;_AED=0.06;_eAED=0.06;_QI=130|0.88|0.8|1|1|1|10|363|1187
chr2_4 exon 5099040 5099564 5099040 ID=Msa0310260-mRNA-1:exon:1786;Parent=Msa0310260-mRNA-1
chr2_4 exon 5100124 5100252 5100124 ID=Msa0310260-mRNA-1:exon:1785;Parent=Msa0310260-mRNA-1
chr2_4 exon 5100463 5100606 5100463 ID=Msa0310260-mRNA-1:exon:1784;Parent=Msa0310260-mRNA-1
chr2_4 exon 5101657 5101826 5101657 ID=Msa0310260-mRNA-1:exon:1783;Parent=Msa0310260-mRNA-1
chr2_4 exon 5102079 5102166 5102079 ID=Msa0310260-mRNA-1:exon:1782;Parent=Msa0310260-mRNA-1
chr2_4 exon 5102783 5102849 5102783 ID=Msa0310260-mRNA-1:exon:1781;Parent=Msa0310260-mRNA-1
chr2_4 exon 5103227 5103357 5103227 ID=Msa0310260-mRNA-1:exon:1780;Parent=Msa0310260-mRNA-1
chr2_4 exon 5103474 5105321 5103474 ID=Msa0310260-mRNA-1:exon:1779;Parent=Msa0310260-mRNA-1
chr2_4 exon 5105386 5105972 5105386 ID=Msa0310260-mRNA-1:exon:1778;Parent=Msa0310260-mRNA-1
chr2_4 exon 5106409 5106776 5106409 ID=Msa0310260-mRNA-1:exon:1777;Parent=Msa0310260-mRNA-1
chr2_4 five_prime_UTR 5106647 5106776 5106647 ID=Msa0310260-mRNA-1:five_prime_utr;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5106409 5106646 5106409 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5105386 5105972 5105386 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5103474 5105321 5103474 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5103227 5103357 5103227 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5102783 5102849 5102783 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5102079 5102166 5102079 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5101657 5101826 5101657 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5100463 5100606 5100463 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5100124 5100252 5100124 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 CDS 5099403 5099564 5099403 ID=Msa0310260-mRNA-1:cds;Parent=Msa0310260-mRNA-1
chr2_4 three_prime_UTR 5099040 5099402 5099040 ID=Msa0310260-mRNA-1:three_prime_utr;Parent=Msa0310260-mRNA-1
Gene Sequence

>Msa0310260

ATGTCCAACCTATTCTCAAGAAGCTTCCACTGTCTATGGTTTCCATGCTCCAATCTTCCTTCTCCTAAACCACCACCTTCTCAAACCCTTCTTCCATTTTCTACTCCAACCCCACTTCCCAGAAGATTCTTCACCTTCACCACTACTCACCACACCCCTACACTTCTCAATTCAACTTCATCTTCAACCCCTTCTCCTCAAGAAGAACATGAAGAACTTGATGTCATCTCTTCAACTGAGCATCCGGATGGAAGTTTTTTGTTCACATTTGGCAATGCTAGCGAGATTAGAGAAAAGATAGCCGAGTTAAACAAACAGAAACTCGTGCCTGAGGGTGTTGTTGATGAAGAAGGTGTTAGTGTTTTGGCAACTGATGATGGTGTTGAACAAATGAGCAATGAGGATGATAGTAACTTAAGGGGAGAAATTGAATCATCTTCAACTGTGGTAGTTGGTGTTGCTGATCAAAATCCTCCGCTTCTCGAGAGTGAAAACGAAAGCAGTGTTGTTCTTGATAGCGAACCTGAGAGTGAGACACCTGTGATCAATGACTTGCAAGTAATTGATAAACATTTTAAGTTGGATTCAGTTGATGATAGTGATGATCAACATGGAGTTTGTAGTGAAGATGTTGCTGCTGCTGCTGTTGAGCATAATGTTGTTCCGAGTGTGTCTGAGGAAGAAGATTCTCAAGTTGGTAGTCACAAAGAAGAAGTTGTCGTTTCAACAGTTTCTCCAGCAGAGTCAGATGTGTTTTCTGATCTGAGTAGTGGTCCTTCTTTGGAAACTGAAGAGAAAGAAGAAGGTGATATTTTGACTTATGTGAAGGCTAACATTGAAGTTGCTCATCTCTCTACAGTTGACAATGGCAATAGTGTGGATAGAGCAGCAAACGGCGTAGCAGGTGGTATTGATGCTGCTGACTTGACTGAATTGGTGGAAGTATCCACTTCTTTAGAGTCTGGTAGTGTTGATGCCGACAGAAGTGAATTGGAACAAGTATCCACTTCTTTAGAGACCGAGCAAGATGGTTACAGTGCAACAGACAATCTTAGTGGTAGTGTTGATGTTGACATATCTGAATCGGTACCAGAGTCCACTTCTTCAGAGTCTGAACAAGTTGATTGTAATGCAAGAGAAAATCTGACTGGCAGCATTGATGCCAAAACAAGTGAATCGGTGCCAGTATCAATTTCTTCAGAGTCAGAGCAAGTTGGTTATGGTGCAACAGACAATGTGACTGGTAGTGTCTGTACTGACATAAGTGAACTGGAACATGTATCCACTTCTTTACAGTCTGAGCAAGATGGTTATATTGCAACAGACAATCTGACTGGCAGTGTTGAGTCTGACATAACTGAATCTGCGCTGGTATCCACTTTTTCAGAGTCTGAACAAGATGGTTTTAGTGCAACAAGCAATCTGACTGGCAGTGTCGATGTTGACATGAGTGAATCAATGCCAGTATCCACTACCATAGAGTCTGAACAAGTTGGTTATATTGAAACAGACAATCTGAGTGGCAGTGTCGATGCTGAAATGAGTGATTTGGTGCCAGTATCCACTACCTTAGAGTCTGAAGAAGTTGGTTACAGTGAAACAGACAATCTTACTGGCAGTGTTGATGCTGACAAAACTGAATTTGTGCCAGTATCCACTTCTTCAGACTCTGAACAAGTTGATTATAGAGCAACAGACAATGAGACTGGCAGTGTCGATCCTGACATGAATGGAGTTGTGCCATTATCCACTTCCTTGGAATCGGAACAAGTCGATTATAGTGCAACAGACAACCTAACTGGCAGTCTTGATATTGCAAGAAGTGAATTGGTGCCAGAATCCTTCTCTTTAGAGTCCGTACAAGCTAATGATAGCGAAACAAATGATATGGCTGGCTGTGTCGATGCTGAAAATAGTGAATTAGTGTCAATATCCACATCTTTAGAGTCCAAACAAGTTGATTATAGTGCAACAGACGATCTGGCTGGCAGTGTTGATACTAATGATAGTGAATTGGTGCCAATGTCGACTTCTTTAGAGTCTGAGCAAGTTGATTATAGTGCAACAGACAACCTGACTGGCAGTGCTGATGCCACAATAAATGAATTGGTGCAAGTATCCCCTTCCTTAGAGTCCAAACAAGTTGATTACAGTGCAACAGACAATCTGGCTGGAAGTGTTGATGCTGACAATATTGATTTGGTGCCAATATCTACTTTAGAGTCTAAACAAGTTGATTATGGTGCAACTGACAACCTGACTGGTAATGTTGATGACGGCATAACAAGTGAGTTGGTGCCAGTACCGACTTCTTTAGACTCTGAACCGTCTGTTAATAGAGAAACAATCCACCAGATTGATGGTGTTGATGCTGAGTTTAGTGAGGCCGTGCCAATATCCACTTCTTTAGAGGCTGAACAAGTTGATTATAGTGCAACGGACAACCTGACTGCCGTTGTTGATACCGAGTTAAGTGAACCGGTGCCATTATCCACTTCCTTAGAACCTGAACAAGCTAATTATAGTACAACAGGCAACTTGACAGGCGGTGTTGATACTGACTTATGTGAGTCGGCACCGGTATCTACTTCTTTGGGGTCTGACGATGATGAAAGAAATCGCCATGTCGTGGATGACTCAGTTGATGCAAGTGAAATGAAAAAGTCAGCATTGTTGGATGATTTGGTTCCATCCTCAGACTTGGCAAACAAAATAGATGTTGGAAATATTGAAAGAAGTGATTATGAAAATCCAATACTTAATACGGTACCAGAGATACATTCAGTTCAGATGGCTAGTGATGGGGAAAATATTTCAAGAACGGAGCTTTTTCTAGTTTCTGGTGCTGCTTGCTTGCCTCATCCCTCTGAGGAACTGACTAGTCGAGAAGATGCTTATATTATTTCTCCCCTAAACTGGCTAGTTGTGGCTGATGGAGTTGGTCAGTGGTCACTTGAAGGGAGTAATACTGGAGTGTATATCAGGGAACTCATGGGAAATTGTGAAGATATCGTGTCAAATTGTGATAACATTTCAACGATAAAACCTGCAGAAGTTCTTATCAGAAGCACCGCTGAAACACATTCTCCAGGGTCATCTTCTGTTTTGGTTGCTTATTTTGATGGACTGGCCCTCCATGCAGCTAACGTTGGGAACACTGGATTTATCATTATAAGACATGGCTCCATCTTCAAAACATCAAATGCCATGTTTCATGAATTCAGTTTTCCGATACATATAGTTAAAGGCGACGACCACTCAGAAATCATTGAGGAGTACAAGATCGATCTAAACGATGGTGATGTGATTGTATTTGGCACAAATGGTCTTTTTGACAATCTTTATGAGAAAGAAATAGCATCAACTGTATCAAAATCACTACAAGCTAGCCTGAAACCTGAGGAAATAGCAGAAATATTGGCGACGACGGCACAAGAGGTTGGAAGATCAAGATCCACTAGAAGTCCCTTTGGTGATGCAGCTCAGGCTTTAGGCTATGTGGGTTATGCAGGTGGCAAGCTTGATGATGTAACTGTTATAGTGTCATTGGTTCAAACTACATAG
Protein sequence

>Msa0310260

MSNLFSRSFHCLWFPCSNLPSPKPPPSQTLLPFSTPTPLPRRFFTFTTTHHTPTLLNSTSSSTPSPQEEHEELDVISSTEHPDGSFLFTFGNASEIREKIAELNKQKLVPEGVVDEEGVSVLATDDGVEQMSNEDDSNLRGEIESSSTVVVGVADQNPPLLESENESSVVLDSEPESETPVINDLQVIDKHFKLDSVDDSDDQHGVCSEDVAAAAVEHNVVPSVSEEEDSQVGSHKEEVVVSTVSPAESDVFSDLSSGPSLETEEKEEGDILTYVKANIEVAHLSTVDNGNSVDRAANGVAGGIDAADLTELVEVSTSLESGSVDADRSELEQVSTSLETEQDGYSATDNLSGSVDVDISESVPESTSSESEQVDCNARENLTGSIDAKTSESVPVSISSESEQVGYGATDNVTGSVCTDISELEHVSTSLQSEQDGYIATDNLTGSVESDITESALVSTFSESEQDGFSATSNLTGSVDVDMSESMPVSTTIESEQVGYIETDNLSGSVDAEMSDLVPVSTTLESEEVGYSETDNLTGSVDADKTEFVPVSTSSDSEQVDYRATDNETGSVDPDMNGVVPLSTSLESEQVDYSATDNLTGSLDIARSELVPESFSLESVQANDSETNDMAGCVDAENSELVSISTSLESKQVDYSATDDLAGSVDTNDSELVPMSTSLESEQVDYSATDNLTGSADATINELVQVSPSLESKQVDYSATDNLAGSVDADNIDLVPISTLESKQVDYGATDNLTGNVDDGITSELVPVPTSLDSEPSVNRETIHQIDGVDAEFSEAVPISTSLEAEQVDYSATDNLTAVVDTELSEPVPLSTSLEPEQANYSTTGNLTGGVDTDLCESAPVSTSLGSDDDERNRHVVDDSVDASEMKKSALLDDLVPSSDLANKIDVGNIERSDYENPILNTVPEIHSVQMASDGENISRTELFLVSGAACLPHPSEELTSREDAYIISPLNWLVVADGVGQWSLEGSNTGVYIRELMGNCEDIVSNCDNISTIKPAEVLIRSTAETHSPGSSSVLVAYFDGLALHAANVGNTGFIIIRHGSIFKTSNAMFHEFSFPIHIVKGDDHSEIIEEYKIDLNDGDVIVFGTNGLFDNLYEKEIASTVSKSLQASLKPEEIAEILATTAQEVGRSRSTRSPFGDAAQALGYVGYAGGKLDDVTVIVSLVQTT*