Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0048920 | A0A072UVF9 | 96.117 | 206 | 7 | 1 | 1 | 206 | 1 | 205 | 1.87e-142 | 404 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002690 | Msa0048920 | 0.810813 | 9.563208e-51 | -8.615850e-47 |
Msa0002700 | Msa0048920 | 0.807982 | 3.873715e-50 | -8.615850e-47 |
Msa0018110 | Msa0048920 | 0.847686 | 9.882084e-60 | -8.615850e-47 |
Msa0021570 | Msa0048920 | 0.809505 | 1.830874e-50 | -8.615850e-47 |
Msa0024070 | Msa0048920 | 0.815542 | 8.762720e-52 | -8.615850e-47 |
Msa0028410 | Msa0048920 | 0.804364 | 2.238766e-49 | -8.615850e-47 |
Msa0028450 | Msa0048920 | 0.811496 | 6.801349e-51 | -8.615850e-47 |
Msa0028940 | Msa0048920 | 0.806785 | 6.948900e-50 | -8.615850e-47 |
Msa0030710 | Msa0048920 | 0.824988 | 5.988488e-54 | -8.615850e-47 |
Msa0036620 | Msa0048920 | 0.809026 | 2.318845e-50 | -8.615850e-47 |
Msa0038860 | Msa0048920 | 0.820223 | 7.685098e-53 | -8.615850e-47 |
Msa0044700 | Msa0048920 | 0.810811 | 9.575217e-51 | -8.615850e-47 |
Msa0045530 | Msa0048920 | 0.822992 | 1.760675e-53 | -8.615850e-47 |
Msa0046090 | Msa0048920 | 0.805604 | 1.231756e-49 | -8.615850e-47 |
Msa0046800 | Msa0048920 | 0.805385 | 1.369153e-49 | -8.615850e-47 |
Msa0048920 | Msa0052180 | 0.830504 | 2.829671e-55 | -8.615850e-47 |
Msa0048920 | Msa0058140 | 0.810537 | 1.097445e-50 | -8.615850e-47 |
Msa0048920 | Msa0058970 | 0.807618 | 4.629647e-50 | -8.615850e-47 |
Msa0048920 | Msa0060720 | 0.803060 | 4.174277e-49 | -8.615850e-47 |
Msa0048920 | Msa0067820 | 0.828922 | 6.865961e-55 | -8.615850e-47 |
Msa0048920 | Msa0069590 | 0.803241 | 3.828758e-49 | -8.615850e-47 |
Msa0048920 | Msa0077990 | 0.814852 | 1.247443e-51 | -8.615850e-47 |
Msa0048920 | Msa0078110 | 0.814564 | 1.444951e-51 | -8.615850e-47 |
Msa0048920 | Msa0081920 | -0.805817 | 1.111506e-49 | -8.615850e-47 |
Msa0048920 | Msa0082340 | 0.804128 | 2.506372e-49 | -8.615850e-47 |
Msa0048920 | Msa0086460 | 0.817286 | 3.568748e-52 | -8.615850e-47 |
Msa0048920 | Msa0093830 | 0.829465 | 5.070110e-55 | -8.615850e-47 |
Msa0048920 | Msa0097220 | 0.838094 | 3.526174e-57 | -8.615850e-47 |
Msa0048920 | Msa0097490 | 0.823594 | 1.273571e-53 | -8.615850e-47 |
Msa0048920 | Msa0124070 | 0.805739 | 1.154290e-49 | -8.615850e-47 |
Msa0048920 | Msa0128840 | 0.827296 | 1.692270e-54 | -8.615850e-47 |
Msa0048920 | Msa0138800 | 0.818379 | 2.021669e-52 | -8.615850e-47 |
Msa0048920 | Msa0141090 | 0.807350 | 5.277332e-50 | -8.615850e-47 |
Msa0048920 | Msa0147070 | 0.819753 | 9.842654e-53 | -8.615850e-47 |
Msa0048920 | Msa0147960 | 0.801821 | 7.515313e-49 | -8.615850e-47 |
Msa0048920 | Msa0168950 | 0.800214 | 1.600405e-48 | -8.615850e-47 |
Msa0048920 | Msa0170550 | 0.810892 | 9.195163e-51 | -8.615850e-47 |
Msa0048920 | Msa0172820 | 0.802391 | 5.736022e-49 | -8.615850e-47 |
Msa0048920 | Msa0181380 | 0.815024 | 1.142815e-51 | -8.615850e-47 |
Msa0048920 | Msa0181740 | 0.835606 | 1.521954e-56 | -8.615850e-47 |
Msa0048920 | Msa0185770 | 0.831274 | 1.831279e-55 | -8.615850e-47 |
Msa0048920 | Msa0186750 | 0.820226 | 7.672084e-53 | -8.615850e-47 |
Msa0048920 | Msa0195850 | 0.805862 | 1.087386e-49 | -8.615850e-47 |
Msa0048920 | Msa0196620 | 0.826919 | 2.082522e-54 | -8.615850e-47 |
Msa0048920 | Msa0231180 | 0.815754 | 7.861471e-52 | -8.615850e-47 |
Msa0048920 | Msa0232160 | 0.812393 | 4.337549e-51 | -8.615850e-47 |
Msa0048920 | Msa0232170 | 0.816748 | 4.713270e-52 | -8.615850e-47 |
Msa0048920 | Msa0238530 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
Msa0048920 | Msa0245690 | 0.809395 | 1.933224e-50 | -8.615850e-47 |
Msa0048920 | Msa0246470 | 0.812104 | 5.015139e-51 | -8.615850e-47 |
Msa0048920 | Msa0246510 | 0.829710 | 4.420049e-55 | -8.615850e-47 |
Msa0048920 | Msa0259570 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
Msa0048920 | Msa0266100 | 0.830360 | 3.069069e-55 | -8.615850e-47 |
Msa0048920 | Msa0269610 | 0.817821 | 2.703206e-52 | -8.615850e-47 |
Msa0048920 | Msa0269790 | 0.818381 | 2.018954e-52 | -8.615850e-47 |
Msa0048920 | Msa0275260 | 0.816571 | 5.162315e-52 | -8.615850e-47 |
Msa0048920 | Msa0276030 | 0.812226 | 4.715636e-51 | -8.615850e-47 |
Msa0048920 | Msa0284980 | 0.830331 | 3.118631e-55 | -8.615850e-47 |
Msa0048920 | Msa0285510 | 0.804207 | 2.413307e-49 | -8.615850e-47 |
Msa0048920 | Msa0288300 | 0.820814 | 5.621651e-53 | -8.615850e-47 |
Msa0048920 | Msa0288360 | 0.812537 | 4.034274e-51 | -8.615850e-47 |
Msa0048920 | Msa0294650 | 0.820739 | 5.851014e-53 | -8.615850e-47 |
Msa0048920 | Msa0305630 | 0.812736 | 3.648069e-51 | -8.615850e-47 |
Msa0048920 | Msa0305810 | 0.805029 | 1.625544e-49 | -8.615850e-47 |
Msa0048920 | Msa0307490 | 0.820268 | 7.503423e-53 | -8.615850e-47 |
Msa0048920 | Msa0307750 | 0.831700 | 1.438699e-55 | -8.615850e-47 |
Msa0048920 | Msa0307780 | 0.856763 | 2.581145e-62 | -8.615850e-47 |
Msa0048920 | Msa0317820 | 0.804861 | 1.762822e-49 | -8.615850e-47 |
Msa0048920 | Msa0323790 | 0.800759 | 1.239639e-48 | -8.615850e-47 |
Msa0048920 | Msa0333290 | 0.806485 | 8.039656e-50 | -8.615850e-47 |
Msa0048920 | Msa0341710 | 0.817980 | 2.488957e-52 | -8.615850e-47 |
Msa0048920 | Msa0353890 | 0.813928 | 1.996823e-51 | -8.615850e-47 |
Msa0048920 | Msa0369770 | 0.808132 | 3.599329e-50 | -8.615850e-47 |
Msa0048920 | Msa0371010 | 0.803857 | 2.853267e-49 | -8.615850e-47 |
Msa0048920 | Msa0371050 | 0.822788 | 1.963826e-53 | -8.615850e-47 |
Msa0048920 | Msa0371640 | 0.802179 | 6.342203e-49 | -8.615850e-47 |
Msa0048920 | Msa0374840 | 0.806998 | 6.263730e-50 | -8.615850e-47 |
Msa0048920 | Msa0375100 | 0.811034 | 8.568024e-51 | -8.615850e-47 |
Msa0048920 | Msa0377990 | 0.811840 | 5.725358e-51 | -8.615850e-47 |
Msa0048920 | Msa0379590 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
Msa0048920 | Msa0380470 | 0.812243 | 4.676715e-51 | -8.615850e-47 |
Msa0048920 | Msa0383110 | 0.808529 | 2.962296e-50 | -8.615850e-47 |
Msa0048920 | Msa0384130 | 0.815265 | 1.009885e-51 | -8.615850e-47 |
Msa0048920 | Msa0384570 | 0.838064 | 3.589879e-57 | -8.615850e-47 |
Msa0048920 | Msa0388000 | 0.802125 | 6.506734e-49 | -8.615850e-47 |
Msa0048920 | Msa0398990 | 0.805678 | 1.188668e-49 | -8.615850e-47 |
Msa0048920 | Msa0404840 | 0.808505 | 2.997383e-50 | -8.615850e-47 |
Msa0048920 | Msa0415860 | 0.804327 | 2.278747e-49 | -8.615850e-47 |
Msa0048920 | Msa0417140 | 0.800192 | 1.617205e-48 | -8.615850e-47 |
Msa0048920 | Msa0429990 | 0.806801 | 6.895816e-50 | -8.615850e-47 |
Msa0048920 | Msa0433090 | -0.800236 | 1.584338e-48 | -8.615850e-47 |
Msa0048920 | Msa0434140 | -0.802144 | 6.448013e-49 | -8.615850e-47 |
Msa0048920 | Msa0439130 | 0.812011 | 5.252973e-51 | -8.615850e-47 |
Msa0048920 | Msa0457750 | 0.808579 | 2.889753e-50 | -8.615850e-47 |
Msa0048920 | Msa0463980 | 0.810065 | 1.387150e-50 | -8.615850e-47 |
Msa0048920 | Msa0474290 | 0.828715 | 7.707430e-55 | -8.615850e-47 |
Msa0048920 | Msa0475080 | 0.832472 | 9.271854e-56 | -8.615850e-47 |
Msa0048920 | Msa0475130 | 0.818956 | 1.495589e-52 | -8.615850e-47 |
Msa0048920 | Msa0477660 | -0.800569 | 1.355429e-48 | -8.615850e-47 |
Msa0048920 | Msa0485350 | 0.802610 | 5.170864e-49 | -8.615850e-47 |
Msa0048920 | Msa0500580 | 0.809622 | 1.727632e-50 | -8.615850e-47 |
Msa0048920 | Msa0501920 | 0.819656 | 1.035482e-52 | -8.615850e-47 |
Msa0048920 | Msa0506740 | 0.830035 | 3.683423e-55 | -8.615850e-47 |
Msa0048920 | Msa0509530 | 0.808530 | 2.960463e-50 | -8.615850e-47 |
Msa0048920 | Msa0511930 | 0.810773 | 9.754916e-51 | -8.615850e-47 |
Msa0048920 | Msa0517820 | 0.811780 | 5.897950e-51 | -8.615850e-47 |
Msa0048920 | Msa0518720 | 0.839321 | 1.699173e-57 | -8.615850e-47 |
Msa0048920 | Msa0521720 | -0.800773 | 1.231567e-48 | -8.615850e-47 |
Msa0048920 | Msa0522510 | 0.820221 | 7.690206e-53 | -8.615850e-47 |
Msa0048920 | Msa0524570 | 0.807848 | 4.135467e-50 | -8.615850e-47 |
Msa0048920 | Msa0527210 | 0.802551 | 5.316750e-49 | -8.615850e-47 |
Msa0048920 | Msa0527420 | 0.813699 | 2.243046e-51 | -8.615850e-47 |
Msa0048920 | Msa0532910 | 0.802554 | 5.310396e-49 | -8.615850e-47 |
Msa0048920 | Msa0545520 | 0.919690 | 3.282917e-87 | -8.615850e-47 |
Msa0048920 | Msa0549700 | 0.817714 | 2.856926e-52 | -8.615850e-47 |
Msa0048920 | Msa0550820 | 0.858054 | 1.071944e-62 | -8.615850e-47 |
Msa0048920 | Msa0550890 | 0.823033 | 1.722309e-53 | -8.615850e-47 |
Msa0048920 | Msa0562040 | 0.808952 | 2.404609e-50 | -8.615850e-47 |
Msa0048920 | Msa0562740 | 0.834307 | 3.232068e-56 | -8.615850e-47 |
Msa0048920 | Msa0577140 | 0.819689 | 1.018123e-52 | -8.615850e-47 |
Msa0048920 | Msa0577910 | 0.803355 | 3.625954e-49 | -8.615850e-47 |
Msa0048920 | Msa0578400 | 0.810158 | 1.324868e-50 | -8.615850e-47 |
Msa0048920 | Msa0583810 | 0.808702 | 2.719608e-50 | -8.615850e-47 |
Msa0048920 | Msa0585810 | 0.807725 | 4.393521e-50 | -8.615850e-47 |
Msa0048920 | Msa0605210 | 0.802080 | 6.648570e-49 | -8.615850e-47 |
Msa0048920 | Msa0606180 | 0.807561 | 4.759731e-50 | -8.615850e-47 |
Msa0048920 | Msa0606230 | 0.871273 | 7.746102e-67 | -8.615850e-47 |
Msa0048920 | Msa0606260 | 0.851343 | 9.441131e-61 | -8.615850e-47 |
Msa0048920 | Msa0608720 | 0.833031 | 6.734410e-56 | -8.615850e-47 |
Msa0048920 | Msa0616570 | 0.838772 | 2.357626e-57 | -8.615850e-47 |
Msa0048920 | Msa0623350 | 0.820614 | 6.248776e-53 | -8.615850e-47 |
Msa0048920 | Msa0624890 | 0.804208 | 2.412570e-49 | -8.615850e-47 |
Msa0048920 | Msa0625820 | 0.822987 | 1.764630e-53 | -8.615850e-47 |
Msa0048920 | Msa0641970 | 0.814245 | 1.699428e-51 | -8.615850e-47 |
Msa0048920 | Msa0646310 | 0.825614 | 4.257397e-54 | -8.615850e-47 |
Msa0048920 | Msa0649140 | 0.847205 | 1.339863e-59 | -8.615850e-47 |
Msa0048920 | Msa0652270 | 0.815856 | 7.460299e-52 | -8.615850e-47 |
Msa0048920 | Msa0654560 | 0.819283 | 1.259783e-52 | -8.615850e-47 |
Msa0048920 | Msa0655980 | 0.840429 | 8.740131e-58 | -8.615850e-47 |
Msa0048920 | Msa0660160 | 0.804991 | 1.656062e-49 | -8.615850e-47 |
Msa0048920 | Msa0661490 | 0.816922 | 4.308350e-52 | -8.615850e-47 |
Msa0048920 | Msa0663540 | 0.804598 | 2.000389e-49 | -8.615850e-47 |
Msa0048920 | Msa0667710 | 0.812701 | 3.713480e-51 | -8.615850e-47 |
Msa0048920 | Msa0681100 | 0.801425 | 9.057567e-49 | -8.615850e-47 |
Msa0048920 | Msa0689980 | 0.842999 | 1.834661e-58 | -8.615850e-47 |
Msa0048920 | Msa0694810 | 0.844771 | 6.151111e-59 | -8.615850e-47 |
Msa0048920 | Msa0696600 | 0.808939 | 2.420321e-50 | -8.615850e-47 |
Msa0048920 | Msa0699200 | 0.803242 | 3.827912e-49 | -8.615850e-47 |
Msa0048920 | Msa0699900 | 0.835625 | 1.504463e-56 | -8.615850e-47 |
Msa0048920 | Msa0703620 | 0.807221 | 5.617991e-50 | -8.615850e-47 |
Msa0048920 | Msa0704750 | 0.815173 | 1.058522e-51 | -8.615850e-47 |
Msa0048920 | Msa0708120 | 0.804814 | 1.803286e-49 | -8.615850e-47 |
Msa0048920 | Msa0708380 | 0.801891 | 7.268759e-49 | -8.615850e-47 |
Msa0048920 | Msa0708450 | 0.816173 | 6.339859e-52 | -8.615850e-47 |
Msa0048920 | Msa0716670 | 0.803755 | 2.995912e-49 | -8.615850e-47 |
Msa0048920 | Msa0742690 | 0.813876 | 2.049848e-51 | -8.615850e-47 |
Msa0048920 | Msa0744070 | 0.805846 | 1.096036e-49 | -8.615850e-47 |
Msa0048920 | Msa0748470 | 0.815476 | 9.066491e-52 | -8.615850e-47 |
Msa0048920 | Msa0762390 | 0.814431 | 1.545821e-51 | -8.615850e-47 |
Msa0048920 | Msa0762470 | 0.802938 | 4.423673e-49 | -8.615850e-47 |
Msa0048920 | Msa0762860 | 0.836926 | 7.029088e-57 | -8.615850e-47 |
Msa0048920 | Msa0762900 | 0.834147 | 3.545488e-56 | -8.615850e-47 |
Msa0048920 | Msa0772530 | 0.804210 | 2.409972e-49 | -8.615850e-47 |
Msa0048920 | Msa0775970 | 0.806730 | 7.137472e-50 | -8.615850e-47 |
Msa0048920 | Msa0796840 | 0.810482 | 1.127734e-50 | -8.615850e-47 |
Msa0048920 | Msa0797180 | 0.801259 | 9.797082e-49 | -8.615850e-47 |
Msa0048920 | Msa0799150 | 0.814058 | 1.869275e-51 | -8.615850e-47 |
Msa0048920 | Msa0811710 | 0.813725 | 2.212964e-51 | -8.615850e-47 |
Msa0048920 | Msa0823760 | 0.800844 | 1.190998e-48 | -8.615850e-47 |
Msa0048920 | Msa0825300 | 0.809726 | 1.640718e-50 | -8.615850e-47 |
Msa0048920 | Msa0827560 | 0.819103 | 1.384517e-52 | -8.615850e-47 |
Msa0048920 | Msa0833980 | 0.801263 | 9.779653e-49 | -8.615850e-47 |
Msa0048920 | Msa0837040 | 0.819172 | 1.335624e-52 | -8.615850e-47 |
Msa0048920 | Msa0841570 | 0.812022 | 5.224393e-51 | -8.615850e-47 |
Msa0048920 | Msa0842660 | 0.837733 | 4.366982e-57 | -8.615850e-47 |
Msa0048920 | Msa0854520 | 0.800690 | 1.280618e-48 | -8.615850e-47 |
Msa0048920 | Msa0854560 | 0.808836 | 2.546633e-50 | -8.615850e-47 |
Msa0048920 | Msa0862750 | 0.813291 | 2.757812e-51 | -8.615850e-47 |
Msa0048920 | Msa0869060 | 0.810073 | 1.381562e-50 | -8.615850e-47 |
Msa0048920 | Msa0879820 | 0.805962 | 1.036255e-49 | -8.615850e-47 |
Msa0048920 | Msa0880200 | 0.808213 | 3.459363e-50 | -8.615850e-47 |
Msa0048920 | Msa0883880 | 0.831839 | 1.329162e-55 | -8.615850e-47 |
Msa0048920 | Msa0907520 | 0.807201 | 5.674239e-50 | -8.615850e-47 |
Msa0048920 | Msa0929440 | 0.813776 | 2.156780e-51 | -8.615850e-47 |
Msa0048920 | Msa0932040 | 0.817750 | 2.804468e-52 | -8.615850e-47 |
Msa0048920 | Msa0933320 | 0.811866 | 5.650118e-51 | -8.615850e-47 |
Msa0048920 | Msa0933500 | 0.808252 | 3.393500e-50 | -8.615850e-47 |
Msa0048920 | Msa0940400 | 0.815672 | 8.198753e-52 | -8.615850e-47 |
Msa0048920 | Msa0967940 | 0.829318 | 5.504192e-55 | -8.615850e-47 |
Msa0048920 | Msa0970160 | 0.819077 | 1.403673e-52 | -8.615850e-47 |
Msa0048920 | Msa0970940 | 0.816105 | 6.565338e-52 | -8.615850e-47 |
Msa0048920 | Msa0971100 | 0.814003 | 1.921659e-51 | -8.615850e-47 |
Msa0048920 | Msa0976950 | 0.829424 | 5.188567e-55 | -8.615850e-47 |
Msa0048920 | Msa0978540 | 0.805420 | 1.346399e-49 | -8.615850e-47 |
Msa0048920 | Msa0985570 | 0.827916 | 1.200855e-54 | -8.615850e-47 |
Msa0048920 | Msa1022590 | 0.826126 | 3.219190e-54 | -8.615850e-47 |
Msa0048920 | Msa1031620 | 0.813450 | 2.543431e-51 | -8.615850e-47 |
Msa0048920 | Msa1033250 | 0.813010 | 3.178322e-51 | -8.615850e-47 |
Msa0048920 | Msa1044520 | 0.853940 | 1.714349e-61 | -8.615850e-47 |
Msa0048920 | Msa1055490 | 0.813678 | 2.266893e-51 | -8.615850e-47 |
Msa0048920 | Msa1061420 | 0.824102 | 9.682646e-54 | -8.615850e-47 |
Msa0048920 | Msa1066930 | 0.801543 | 8.570249e-49 | -8.615850e-47 |
Msa0048920 | Msa1070710 | 0.807946 | 3.941638e-50 | -8.615850e-47 |
Msa0048920 | Msa1072850 | 0.807828 | 4.176193e-50 | -8.615850e-47 |
Msa0048920 | Msa1074490 | -0.806563 | 7.743025e-50 | -8.615850e-47 |
Msa0048920 | Msa1082760 | 0.812218 | 4.735407e-51 | -8.615850e-47 |
Msa0048920 | Msa1095880 | 0.812428 | 4.260941e-51 | -8.615850e-47 |
Msa0048920 | Msa1106760 | 0.851702 | 7.473395e-61 | -8.615850e-47 |
Msa0048920 | Msa1115000 | -0.800534 | 1.378051e-48 | -8.615850e-47 |
Msa0048920 | Msa1118870 | 0.814975 | 1.171475e-51 | -8.615850e-47 |
Msa0048920 | Msa1118890 | 0.808032 | 3.780275e-50 | -8.615850e-47 |
Msa0048920 | Msa1126980 | 0.820223 | 7.685098e-53 | -8.615850e-47 |
Msa0048920 | Msa1131010 | 0.803406 | 3.539814e-49 | -8.615850e-47 |
Msa0048920 | Msa1134840 | 0.812972 | 3.238680e-51 | -8.615850e-47 |
Msa0048920 | Msa1144470 | 0.839213 | 1.812609e-57 | -8.615850e-47 |
Msa0048920 | Msa1150170 | 0.834935 | 2.247568e-56 | -8.615850e-47 |
Msa0048920 | Msa1154130 | 0.806613 | 7.556310e-50 | -8.615850e-47 |
Msa0048920 | Msa1162050 | -0.818393 | 2.007113e-52 | -8.615850e-47 |
Msa0048920 | Msa1174450 | -0.800088 | 1.698099e-48 | -8.615850e-47 |
Msa0048920 | Msa1175740 | 0.818446 | 1.951882e-52 | -8.615850e-47 |
Msa0048920 | Msa1177300 | 0.825391 | 4.808057e-54 | -8.615850e-47 |
Msa0048920 | Msa1190670 | 0.825185 | 5.381399e-54 | -8.615850e-47 |
Msa0048920 | Msa1197210 | 0.833408 | 5.424191e-56 | -8.615850e-47 |
Msa0048920 | Msa1222900 | 0.803069 | 4.157000e-49 | -8.615850e-47 |
Msa0048920 | Msa1223050 | 0.814240 | 1.703807e-51 | -8.615850e-47 |
Msa0048920 | Msa1223520 | 0.824828 | 6.531106e-54 | -8.615850e-47 |
Msa0048920 | Msa1223600 | 0.809284 | 2.041884e-50 | -8.615850e-47 |
Msa0048920 | Msa1225280 | 0.840194 | 1.006978e-57 | -8.615850e-47 |
Msa0048920 | Msa1226330 | 0.807240 | 5.567198e-50 | -8.615850e-47 |
Msa0048920 | Msa1235880 | 0.831349 | 1.755203e-55 | -8.615850e-47 |
Msa0048920 | Msa1235960 | 0.853122 | 2.944520e-61 | -8.615850e-47 |
Msa0048920 | Msa1235990 | 0.847036 | 1.490745e-59 | -8.615850e-47 |
Msa0048920 | Msa1236090 | 0.822835 | 1.915097e-53 | -8.615850e-47 |
Msa0048920 | Msa1244940 | 0.822286 | 2.568927e-53 | -8.615850e-47 |
Msa0048920 | Msa1251830 | 0.809180 | 2.149292e-50 | -8.615850e-47 |
Msa0048920 | Msa1251890 | 0.831231 | 1.877361e-55 | -8.615850e-47 |
Msa0048920 | Msa1263460 | 0.833592 | 4.882104e-56 | -8.615850e-47 |
Msa0048920 | Msa1263600 | 0.842759 | 2.124706e-58 | -8.615850e-47 |
Msa0048920 | Msa1264300 | 0.854594 | 1.109042e-61 | -8.615850e-47 |
Msa0048920 | Msa1302750 | 0.803489 | 3.401423e-49 | -8.615850e-47 |
Msa0048920 | Msa1303040 | 0.810021 | 1.417917e-50 | -8.615850e-47 |
Msa0048920 | Msa1307380 | 0.811720 | 6.079357e-51 | -8.615850e-47 |
Msa0048920 | Msa1315990 | 0.828998 | 6.580713e-55 | -8.615850e-47 |
Msa0048920 | Msa1316090 | 0.857872 | 1.214263e-62 | -8.615850e-47 |
Msa0048920 | Msa1317090 | 0.805739 | 1.154290e-49 | -8.615850e-47 |
Msa0048920 | Msa1325260 | 0.822225 | 2.654942e-53 | -8.615850e-47 |
Msa0048920 | Msa1334350 | 0.827152 | 1.831705e-54 | -8.615850e-47 |
Msa0048920 | Msa1349720 | 0.816400 | 5.639346e-52 | -8.615850e-47 |
Msa0048920 | Msa1356500 | 0.817230 | 3.673012e-52 | -8.615850e-47 |
Msa0048920 | Msa1358590 | 0.801527 | 8.635453e-49 | -8.615850e-47 |
Msa0048920 | Msa1366400 | 0.803812 | 2.915817e-49 | -8.615850e-47 |
Msa0048920 | Msa1371690 | 0.821410 | 4.097668e-53 | -8.615850e-47 |
Msa0048920 | Msa1372460 | 0.801260 | 9.791269e-49 | -8.615850e-47 |
Msa0048920 | Msa1373570 | 0.801533 | 8.608194e-49 | -8.615850e-47 |
Msa0048920 | Msa1376230 | 0.801389 | 9.214759e-49 | -8.615850e-47 |
Msa0048920 | Msa1387650 | 0.835364 | 1.752045e-56 | -8.615850e-47 |
Msa0048920 | Msa1402340 | 0.827117 | 1.867654e-54 | -8.615850e-47 |
Msa0048920 | Msa1405990 | 0.821793 | 3.342779e-53 | -8.615850e-47 |
Msa0048920 | Msa1412810 | 0.820071 | 8.322646e-53 | -8.615850e-47 |
Msa0048920 | Msa1414280 | 0.826232 | 3.037683e-54 | -8.615850e-47 |
Msa0048920 | Msa1420630 | 0.802615 | 5.157034e-49 | -8.615850e-47 |
Msa0048920 | Msa1425570 | 0.801877 | 7.316583e-49 | -8.615850e-47 |
Msa0048920 | Msa1428050 | 0.818277 | 2.132121e-52 | -8.615850e-47 |
Msa0048920 | Msa1430940 | 0.818627 | 1.776086e-52 | -8.615850e-47 |
Msa0048920 | Msa1438380 | 0.818638 | 1.765546e-52 | -8.615850e-47 |
Msa0048920 | Msa1439000 | 0.801872 | 7.334766e-49 | -8.615850e-47 |
Msa0048920 | Msa1444750 | 0.843964 | 1.013329e-58 | -8.615850e-47 |
Msa0048920 | Msa1449510 | 0.811693 | 6.161557e-51 | -8.615850e-47 |
Msa0048920 | Msa1453130 | 0.805818 | 1.110914e-49 | -8.615850e-47 |
Msa0048920 | Msa1453900 | 0.812265 | 4.625189e-51 | -8.615850e-47 |
Msa0048920 | Msa1455000 | 0.811234 | 7.751954e-51 | -8.615850e-47 |
Msa0048920 | Msa1462700 | 0.802389 | 5.742879e-49 | -8.615850e-47 |
Msa0048920 | Msa1465950 | 0.803031 | 4.231631e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0048920 | MtrunA17_Chr4g0026241 | 96.117 | 206 | 7 | 1 | 1 | 206 | 1 | 205 | 3.60e-146 | 404 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0048920 | AT3G44380.1 | 67.598 | 179 | 58 | 0 | 5 | 183 | 6 | 184 | 4.48e-83 | 244 |
Find 86 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTACAAACTTACGAAATA+AGG | 0.225859 | 1_2:-2015971 | None:intergenic |
AGTGAAAACGTGGTCAAATT+TGG | 0.233053 | 1_2:-2015997 | None:intergenic |
TAACTCTCACTTTAAACTTA+TGG | 0.256093 | 1_2:-2013746 | None:intergenic |
AGGTGGAATGTTGGGTCTTT+TGG | 0.258820 | 1_2:-2013387 | None:intergenic |
TTTACTGTTTGAAATGCTTT+TGG | 0.258972 | 1_2:+2016024 | Msa0048920:three_prime_UTR |
GTGATGGTGTTGTTGTTATA+TGG | 0.327349 | 1_2:-2013095 | None:intergenic |
ACGGAGGAAGGATGAAATTA+AGG | 0.329845 | 1_2:-2012995 | None:intergenic |
ACTGCACAACTTGAACTCTT+TGG | 0.363523 | 1_2:+2013822 | Msa0048920:CDS |
TTTACAAACTTACGAAATAA+GGG | 0.378352 | 1_2:-2015970 | None:intergenic |
AGAACTTCTGCGTCTACAAC+GGG | 0.388729 | 1_2:-2013447 | None:intergenic |
GTTGAGTTAAGATTCTTGAT+TGG | 0.393041 | 1_2:+2016121 | Msa0048920:three_prime_UTR |
TAGTTGATTGGGGCTATGTT+TGG | 0.400386 | 1_2:-2013492 | None:intergenic |
GATGCGGCTGTTGATATTGC+TGG | 0.402057 | 1_2:+2013699 | Msa0048920:CDS |
TTGTTATATGGTTATTATTG+TGG | 0.419717 | 1_2:-2013083 | None:intergenic |
TAACGACTTTACAAGCTTTG+AGG | 0.428220 | 1_2:+2016099 | Msa0048920:three_prime_UTR |
GGCTGAGACCCGGCTTGGAC+AGG | 0.429344 | 1_2:-2013567 | None:intergenic |
GTTGTTGAAGAGTAGTTGAT+TGG | 0.439944 | 1_2:-2013504 | None:intergenic |
TTCTACGAAGGTTCTCTCCT+CGG | 0.440988 | 1_2:+2013537 | Msa0048920:CDS |
GGTTCAGCTCCTGTCCAAGC+CGG | 0.442027 | 1_2:+2013558 | Msa0048920:CDS |
TTCCCTTACAGCTCTATACT+AGG | 0.444135 | 1_2:-2016069 | None:intergenic |
AGCTGGACATCAGCAATAAT+AGG | 0.444898 | 1_2:+2013321 | Msa0048920:CDS |
TTGAGATGAGGTGGAATGTT+GGG | 0.453056 | 1_2:-2013395 | None:intergenic |
GAAGCCATGAGTTTGGTGTT+TGG | 0.457305 | 1_2:-2013168 | None:intergenic |
AGAAAAGAATGGACGGAGGA+AGG | 0.463692 | 1_2:-2013007 | None:intergenic |
GTTCAGCTCCTGTCCAAGCC+GGG | 0.468167 | 1_2:+2013559 | Msa0048920:CDS |
ACATCTCAGCTCCTCAGAAC+CGG | 0.474289 | 1_2:+2013205 | Msa0048920:five_prime_UTR |
CAACTTGAACTCTTTGGCTC+AGG | 0.480208 | 1_2:+2013828 | Msa0048920:CDS |
AATTAAGGATAATGCGTTTG+AGG | 0.485940 | 1_2:-2012980 | None:intergenic |
GCGTCTACAACGGGGAGGCT+TGG | 0.496927 | 1_2:-2013438 | None:intergenic |
GATTGGGGCTATGTTTGGAT+TGG | 0.499436 | 1_2:-2013487 | None:intergenic |
TCGGTGGCTGAGACCCGGCT+TGG | 0.502166 | 1_2:-2013572 | None:intergenic |
TTGTTGAAGAGTAGTTGATT+GGG | 0.503825 | 1_2:-2013503 | None:intergenic |
GTGCTAGGAAGCCATGAGTT+TGG | 0.507496 | 1_2:-2013175 | None:intergenic |
GGGAATGATTGTATTGGTAA+AGG | 0.514283 | 1_2:-2013034 | None:intergenic |
GGCAAAGGGAATGATTGTAT+TGG | 0.519499 | 1_2:-2013040 | None:intergenic |
CGGCTCGGCTTAAAGCTCTT+CGG | 0.519771 | 1_2:+2013619 | Msa0048920:CDS |
AAAAGAGGTCACAATGGAGC+TGG | 0.519825 | 1_2:+2013304 | Msa0048920:CDS |
TTCCCTTTGCCTCTCATAGT+CGG | 0.523144 | 1_2:+2013052 | Msa0048920:five_prime_UTR |
GCCCCTAGTATAGAGCTGTA+AGG | 0.524647 | 1_2:+2016066 | Msa0048920:three_prime_UTR |
CGAAGAGCTTTAAGCCGAGC+CGG | 0.530739 | 1_2:-2013618 | None:intergenic |
TCCCTTACAGCTCTATACTA+GGG | 0.534035 | 1_2:-2016068 | None:intergenic |
CCCCTAGTATAGAGCTGTAA+GGG | 0.534430 | 1_2:+2016067 | Msa0048920:three_prime_UTR |
TCGCCACGTCAGACATTACT+CGG | 0.536903 | 1_2:-2013659 | None:intergenic |
ATGTCAGTTACTGAGACTTC+CGG | 0.538438 | 1_2:+2013599 | Msa0048920:CDS |
GTAAAGGAGGAAGAAAAGAA+TGG | 0.544660 | 1_2:-2013018 | None:intergenic |
AATGATTGTATTGGTAAAGG+AGG | 0.551508 | 1_2:-2013031 | None:intergenic |
GATGATGAGTTGGCAGGTGA+AGG | 0.551759 | 1_2:+2015741 | Msa0048920:CDS |
ATTGAGATGAGGTGGAATGT+TGG | 0.554077 | 1_2:-2013396 | None:intergenic |
GTGTTAACCCTCCGGTTCTG+AGG | 0.555034 | 1_2:-2013216 | None:intergenic |
GCACCGACTATGAGAGGCAA+AGG | 0.556990 | 1_2:-2013055 | None:intergenic |
TGAAGTTGATTGAGATGAGG+TGG | 0.561080 | 1_2:-2013404 | None:intergenic |
TATGCAAGTAGATGATGAGT+TGG | 0.566187 | 1_2:+2015731 | Msa0048920:intron |
AGGAGGAAGAAAAGAATGGA+CGG | 0.577208 | 1_2:-2013014 | None:intergenic |
AGTTACTGAGACTTCCGGCT+CGG | 0.580095 | 1_2:+2013604 | Msa0048920:CDS |
TGAGATGTATCTGAAGTGCT+AGG | 0.586842 | 1_2:-2013190 | None:intergenic |
TGTTGAAGAGTAGTTGATTG+GGG | 0.588353 | 1_2:-2013502 | None:intergenic |
AGGAAGAAAAGAATGGACGG+AGG | 0.588813 | 1_2:-2013011 | None:intergenic |
TACACCAAACACCAAACTCA+TGG | 0.599095 | 1_2:+2013164 | Msa0048920:five_prime_UTR |
AAGAACTTCTGCGTCTACAA+CGG | 0.599919 | 1_2:-2013448 | None:intergenic |
ATGTCACATGATCTCAAAGT+CGG | 0.602542 | 1_2:-2015897 | None:intergenic |
TGACCTCGGTGGCTGAGACC+CGG | 0.603018 | 1_2:-2013577 | None:intergenic |
GTCATTGCACCGACTATGAG+AGG | 0.603941 | 1_2:-2013061 | None:intergenic |
GTATGAGATTGTGATGGATG+TGG | 0.605181 | 1_2:-2013134 | None:intergenic |
CACCGACTATGAGAGGCAAA+GGG | 0.606633 | 1_2:-2013054 | None:intergenic |
CAAGTAGATGATGAGTTGGC+AGG | 0.612414 | 1_2:+2015735 | Msa0048920:intron |
GTTTGGATTGGTGACATGAA+CGG | 0.614061 | 1_2:-2013475 | None:intergenic |
ATATGAATTATTATGTGTGA+TGG | 0.620244 | 1_2:-2013111 | None:intergenic |
TCTCAGCTCCTCAGAACCGG+AGG | 0.634975 | 1_2:+2013208 | Msa0048920:five_prime_UTR |
CCCTTACAGCTCTATACTAG+GGG | 0.636040 | 1_2:-2016067 | None:intergenic |
CTCAGTAACTGACATGACCT+CGG | 0.639739 | 1_2:-2013591 | None:intergenic |
CTTGGACAGGAGCTGAACCG+AGG | 0.641650 | 1_2:-2013554 | None:intergenic |
AATTGAGTATGAGATTGTGA+TGG | 0.645677 | 1_2:-2013140 | None:intergenic |
TGAAACTGAAGCAAAAGCTG+AGG | 0.653198 | 1_2:+2015776 | Msa0048920:CDS |
CTCAGCTCCTCAGAACCGGA+GGG | 0.664025 | 1_2:+2013209 | Msa0048920:five_prime_UTR |
AAGTGAAGTTGATTGAGATG+AGG | 0.676539 | 1_2:-2013407 | None:intergenic |
GAGCCGAGTAATGTCTGACG+TGG | 0.684373 | 1_2:+2013656 | Msa0048920:CDS |
ACGTGAGATGGTTCTTGATG+CGG | 0.689072 | 1_2:+2013683 | Msa0048920:CDS |
TGACGTGGCGAAACGTGAGA+TGG | 0.689628 | 1_2:+2013671 | Msa0048920:CDS |
GTCCCACCACAAAACTCTAG+CGG | 0.692849 | 1_2:-2013724 | None:intergenic |
ACCTTCGTAGAAAATTGACA+TGG | 0.695121 | 1_2:-2013526 | None:intergenic |
GAGTTGGCAGGTGAAGGTGA+AGG | 0.709725 | 1_2:+2015747 | Msa0048920:CDS |
AGTAAAACATAGTGAAAACG+TGG | 0.721954 | 1_2:-2016007 | None:intergenic |
AAGCCGGGTCTCAGCCACCG+AGG | 0.724149 | 1_2:+2013574 | Msa0048920:CDS |
CTTCTGCGTCTACAACGGGG+AGG | 0.732058 | 1_2:-2013443 | None:intergenic |
AGTAACTGACATGACCTCGG+TGG | 0.742599 | 1_2:-2013588 | None:intergenic |
GAACTTCTGCGTCTACAACG+GGG | 0.764589 | 1_2:-2013446 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTTTATAATTTTTTATTAG+TGG | - | chr1_2:2015514-2015533 | None:intergenic | 10.0% |
!!! | AATAATTTTAAAAGTTGAAC+AGG | + | chr1_2:2015574-2015593 | Msa0048920:intron | 15.0% |
!!! | ATTTAAAGTTGAGATATTTT+AGG | + | chr1_2:2015873-2015892 | Msa0048920:three_prime_UTR | 15.0% |
!! | TTGTTATATGGTTATTATTG+TGG | - | chr1_2:2013086-2013105 | None:intergenic | 20.0% |
!! | ATATGAATTATTATGTGTGA+TGG | - | chr1_2:2013114-2013133 | None:intergenic | 20.0% |
!! | CGAAATAATCAAACAAATTA+TGG | - | chr1_2:2014127-2014146 | None:intergenic | 20.0% |
!!! | ATATTATTGTGTTGATGTAA+TGG | + | chr1_2:2014191-2014210 | Msa0048920:intron | 20.0% |
!!! | TATTATTGTGTTGATGTAAT+GGG | + | chr1_2:2014192-2014211 | Msa0048920:intron | 20.0% |
!!! | AATTTTCAACACAACAAATA+CGG | - | chr1_2:2014570-2014589 | None:intergenic | 20.0% |
!! | TATAAAAAGAAAAACTTAGC+CGG | - | chr1_2:2014720-2014739 | None:intergenic | 20.0% |
!! | TAGAAGAAAAAAAACAATGA+AGG | - | chr1_2:2015186-2015205 | None:intergenic | 20.0% |
!! | AGAATGTAAAATTTCTAAAC+CGG | + | chr1_2:2015532-2015551 | Msa0048920:intron | 20.0% |
!! | TCAAAGATAAAATGAGTAAA+GGG | - | chr1_2:2015660-2015679 | None:intergenic | 20.0% |
!! | TTTACAAACTTACGAAATAA+GGG | - | chr1_2:2015973-2015992 | None:intergenic | 20.0% |
!! | ATTTACAAACTTACGAAATA+AGG | - | chr1_2:2015974-2015993 | None:intergenic | 20.0% |
!! | CAACAAAACTAATCTTTTCA+TGG | + | chr1_2:2013275-2013294 | Msa0048920:exon | 25.0% |
! | TAACTCTCACTTTAAACTTA+TGG | - | chr1_2:2013749-2013768 | None:intergenic | 25.0% |
! | TCAATAACATCAAGAAAAAC+AGG | - | chr1_2:2013792-2013811 | None:intergenic | 25.0% |
!! | TTTTCTTGATGTTATTGATC+AGG | + | chr1_2:2013794-2013813 | Msa0048920:CDS | 25.0% |
! | CAAATTAAGCATAGAAAAAG+TGG | + | chr1_2:2013886-2013905 | Msa0048920:intron | 25.0% |
! | AGCACAAAACATTAAAAACA+GGG | - | chr1_2:2013987-2014006 | None:intergenic | 25.0% |
! | AAGCACAAAACATTAAAAAC+AGG | - | chr1_2:2013988-2014007 | None:intergenic | 25.0% |
! | TTTATACGTAGGATGTATAT+TGG | + | chr1_2:2014294-2014313 | Msa0048920:intron | 25.0% |
! | AAATCATCCTACAAATGTTA+AGG | - | chr1_2:2014358-2014377 | None:intergenic | 25.0% |
!!! | TGCTATTGATTTCTCATAAT+GGG | - | chr1_2:2015130-2015149 | None:intergenic | 25.0% |
!!! | TTGCTATTGATTTCTCATAA+TGG | - | chr1_2:2015131-2015150 | None:intergenic | 25.0% |
! | AAGAAAAAAAACAATGAAGG+CGG | - | chr1_2:2015183-2015202 | None:intergenic | 25.0% |
!! | TTTAAACGGTTATTGGTTAA+GGG | - | chr1_2:2015290-2015309 | None:intergenic | 25.0% |
!!! | AATTTTAAAAGTTGAACAGG+TGG | + | chr1_2:2015577-2015596 | Msa0048920:intron | 25.0% |
! | CAAAGATAAAATGAGTAAAG+GGG | - | chr1_2:2015659-2015678 | None:intergenic | 25.0% |
! | CTCAAAGATAAAATGAGTAA+AGG | - | chr1_2:2015661-2015680 | None:intergenic | 25.0% |
!!! | TTTACTGTTTGAAATGCTTT+TGG | + | chr1_2:2016024-2016043 | Msa0048920:three_prime_UTR | 25.0% |
!!! | TTACTGTTTGAAATGCTTTT+GGG | + | chr1_2:2016025-2016044 | Msa0048920:three_prime_UTR | 25.0% |
AATTAAGGATAATGCGTTTG+AGG | - | chr1_2:2012983-2013002 | None:intergenic | 30.0% | |
! | AATGATTGTATTGGTAAAGG+AGG | - | chr1_2:2013034-2013053 | None:intergenic | 30.0% |
AATTGAGTATGAGATTGTGA+TGG | - | chr1_2:2013143-2013162 | None:intergenic | 30.0% | |
!!! | TTTTTTTTGTGTTAACCCTC+CGG | - | chr1_2:2013227-2013246 | None:intergenic | 30.0% |
! | TTTTCATGGAAGAGAAAAAG+AGG | + | chr1_2:2013289-2013308 | Msa0048920:exon | 30.0% |
TTGTTGAAGAGTAGTTGATT+GGG | - | chr1_2:2013506-2013525 | None:intergenic | 30.0% | |
!! | AAAAAGTGGTGTGATTTGTT+AGG | + | chr1_2:2013900-2013919 | Msa0048920:intron | 30.0% |
! | ATTTGTTAGGTTTGGGAAAT+TGG | + | chr1_2:2013913-2013932 | Msa0048920:intron | 30.0% |
AAAAATCAAAACGTGACGTT+AGG | - | chr1_2:2013946-2013965 | None:intergenic | 30.0% | |
TAATGGGATATTCATAGTCT+CGG | + | chr1_2:2014208-2014227 | Msa0048920:intron | 30.0% | |
TTACACGTGTATTTATACGT+AGG | + | chr1_2:2014283-2014302 | Msa0048920:intron | 30.0% | |
AATCTTCTTTGATTCAATCG+CGG | - | chr1_2:2014328-2014347 | None:intergenic | 30.0% | |
TGAATCAAAGAAGATTGATG+TGG | + | chr1_2:2014332-2014351 | Msa0048920:intron | 30.0% | |
TGAATTAAAGAGTTTCGTCA+AGG | - | chr1_2:2014430-2014449 | None:intergenic | 30.0% | |
TGACGAAACTCTTTAATTCA+TGG | + | chr1_2:2014430-2014449 | Msa0048920:intron | 30.0% | |
GACGAAACTCTTTAATTCAT+GGG | + | chr1_2:2014431-2014450 | Msa0048920:intron | 30.0% | |
!! | GCATTTTAATGAAAATGACG+TGG | - | chr1_2:2014683-2014702 | None:intergenic | 30.0% |
TAAAATATCATGCAGTGCAA+AGG | - | chr1_2:2014877-2014896 | None:intergenic | 30.0% | |
GCACAACAGTATTATAAACA+CGG | + | chr1_2:2014897-2014916 | Msa0048920:intron | 30.0% | |
TCAATAGAATTCCATGAGAT+TGG | + | chr1_2:2014922-2014941 | Msa0048920:intron | 30.0% | |
CAATAGAATTCCATGAGATT+GGG | + | chr1_2:2014923-2014942 | Msa0048920:intron | 30.0% | |
!! | TTGTCTTGTTCGATAACTTT+TGG | + | chr1_2:2015076-2015095 | Msa0048920:intron | 30.0% |
! | ATTGATTTCTCATAATGGGA+TGG | - | chr1_2:2015126-2015145 | None:intergenic | 30.0% |
GAAATCAATAGCAATTCCAA+TGG | + | chr1_2:2015137-2015156 | Msa0048920:intron | 30.0% | |
AGAGCTTAAGTAGTTATTGA+TGG | - | chr1_2:2015218-2015237 | None:intergenic | 30.0% | |
! | GTTTAAACGGTTATTGGTTA+AGG | - | chr1_2:2015291-2015310 | None:intergenic | 30.0% |
ATCTTGGTTTAAACGGTTAT+TGG | - | chr1_2:2015297-2015316 | None:intergenic | 30.0% | |
TTGACAGATCTTGGTTTAAA+CGG | - | chr1_2:2015304-2015323 | None:intergenic | 30.0% | |
AGTAAAACATAGTGAAAACG+TGG | - | chr1_2:2016010-2016029 | None:intergenic | 30.0% | |
!! | TACTGTTTGAAATGCTTTTG+GGG | + | chr1_2:2016026-2016045 | Msa0048920:three_prime_UTR | 30.0% |
GTTGAGTTAAGATTCTTGAT+TGG | + | chr1_2:2016121-2016140 | Msa0048920:three_prime_UTR | 30.0% | |
GTAAAGGAGGAAGAAAAGAA+TGG | - | chr1_2:2013021-2013040 | None:intergenic | 35.0% | |
! | GGGAATGATTGTATTGGTAA+AGG | - | chr1_2:2013037-2013056 | None:intergenic | 35.0% |
!! | GTGATGGTGTTGTTGTTATA+TGG | - | chr1_2:2013098-2013117 | None:intergenic | 35.0% |
AAGAGAAAAAGAGGTCACAA+TGG | + | chr1_2:2013298-2013317 | Msa0048920:CDS | 35.0% | |
! | AAGTGAAGTTGATTGAGATG+AGG | - | chr1_2:2013410-2013429 | None:intergenic | 35.0% |
TGTTGAAGAGTAGTTGATTG+GGG | - | chr1_2:2013505-2013524 | None:intergenic | 35.0% | |
GTTGTTGAAGAGTAGTTGAT+TGG | - | chr1_2:2013507-2013526 | None:intergenic | 35.0% | |
! | ACCATGTCAATTTTCTACGA+AGG | + | chr1_2:2013525-2013544 | Msa0048920:CDS | 35.0% |
ACCTTCGTAGAAAATTGACA+TGG | - | chr1_2:2013529-2013548 | None:intergenic | 35.0% | |
!! | TGGTGTGATTTGTTAGGTTT+GGG | + | chr1_2:2013906-2013925 | Msa0048920:intron | 35.0% |
GCTTCTCAAGTTTGAATTGT+AGG | + | chr1_2:2014004-2014023 | Msa0048920:intron | 35.0% | |
ATACGTAGGATGTATATTGG+AGG | + | chr1_2:2014297-2014316 | Msa0048920:intron | 35.0% | |
CTGCACAATCTAGGTTAATA+CGG | - | chr1_2:2014477-2014496 | None:intergenic | 35.0% | |
!! | AATGCCATTTAACTTGCAAC+CGG | + | chr1_2:2014698-2014717 | Msa0048920:intron | 35.0% |
TGACTGTAACTAGTGATTTG+AGG | - | chr1_2:2014796-2014815 | None:intergenic | 35.0% | |
TCACTAGTTACAGTCATTAG+TGG | + | chr1_2:2014800-2014819 | Msa0048920:intron | 35.0% | |
AAAAAAAACAATGAAGGCGG+TGG | - | chr1_2:2015180-2015199 | None:intergenic | 35.0% | |
TGAGTAGTGATGTTCTGTTA+TGG | - | chr1_2:2015259-2015278 | None:intergenic | 35.0% | |
TGGTTATAGAAGATGTTGCA+GGG | - | chr1_2:2015334-2015353 | None:intergenic | 35.0% | |
TTCTATAACCAGGTGTGTTA+AGG | + | chr1_2:2015343-2015362 | Msa0048920:intron | 35.0% | |
AGAATGAAAAGAAAAGGCCA+TGG | - | chr1_2:2015374-2015393 | None:intergenic | 35.0% | |
! | TTTTCTTTTCATTCTCACCG+CGG | + | chr1_2:2015379-2015398 | Msa0048920:intron | 35.0% |
ACAGATTCGATGGTGTATAT+GGG | - | chr1_2:2015416-2015435 | None:intergenic | 35.0% | |
TGTCACAAAACAAATGGCTA+AGG | - | chr1_2:2015445-2015464 | None:intergenic | 35.0% | |
AATTTCTAAACCGGTTGACT+CGG | + | chr1_2:2015541-2015560 | Msa0048920:intron | 35.0% | |
! | ACCTTCATTTGTTTCTCATG+TGG | + | chr1_2:2015692-2015711 | Msa0048920:intron | 35.0% |
! | CCTTCATTTGTTTCTCATGT+GGG | + | chr1_2:2015693-2015712 | Msa0048920:intron | 35.0% |
TATGCAAGTAGATGATGAGT+TGG | + | chr1_2:2015731-2015750 | Msa0048920:intron | 35.0% | |
ATGTCACATGATCTCAAAGT+CGG | - | chr1_2:2015900-2015919 | None:intergenic | 35.0% | |
AGTGAAAACGTGGTCAAATT+TGG | - | chr1_2:2016000-2016019 | None:intergenic | 35.0% | |
TAACGACTTTACAAGCTTTG+AGG | + | chr1_2:2016099-2016118 | Msa0048920:three_prime_UTR | 35.0% | |
ACGGAGGAAGGATGAAATTA+AGG | - | chr1_2:2012998-2013017 | None:intergenic | 40.0% | |
AGGAGGAAGAAAAGAATGGA+CGG | - | chr1_2:2013017-2013036 | None:intergenic | 40.0% | |
GGCAAAGGGAATGATTGTAT+TGG | - | chr1_2:2013043-2013062 | None:intergenic | 40.0% | |
!! | GTATGAGATTGTGATGGATG+TGG | - | chr1_2:2013137-2013156 | None:intergenic | 40.0% |
TACACCAAACACCAAACTCA+TGG | + | chr1_2:2013164-2013183 | Msa0048920:five_prime_UTR | 40.0% | |
! | TGAGATGTATCTGAAGTGCT+AGG | - | chr1_2:2013193-2013212 | None:intergenic | 40.0% |
AGCTGGACATCAGCAATAAT+AGG | + | chr1_2:2013321-2013340 | Msa0048920:CDS | 40.0% | |
TTGAGATGAGGTGGAATGTT+GGG | - | chr1_2:2013398-2013417 | None:intergenic | 40.0% | |
ATTGAGATGAGGTGGAATGT+TGG | - | chr1_2:2013399-2013418 | None:intergenic | 40.0% | |
! | TGAAGTTGATTGAGATGAGG+TGG | - | chr1_2:2013407-2013426 | None:intergenic | 40.0% |
AAGAACTTCTGCGTCTACAA+CGG | - | chr1_2:2013451-2013470 | None:intergenic | 40.0% | |
!! | GTTTGGATTGGTGACATGAA+CGG | - | chr1_2:2013478-2013497 | None:intergenic | 40.0% |
TAGTTGATTGGGGCTATGTT+TGG | - | chr1_2:2013495-2013514 | None:intergenic | 40.0% | |
ATGTCAGTTACTGAGACTTC+CGG | + | chr1_2:2013599-2013618 | Msa0048920:CDS | 40.0% | |
ACTGCACAACTTGAACTCTT+TGG | + | chr1_2:2013822-2013841 | Msa0048920:CDS | 40.0% | |
!! | GTGGTGTGATTTGTTAGGTT+TGG | + | chr1_2:2013905-2013924 | Msa0048920:intron | 40.0% |
! | GATGTGGCCTTAACATTTGT+AGG | + | chr1_2:2014348-2014367 | Msa0048920:intron | 40.0% |
GTAAATGTAGCGTACCTTTG+AGG | + | chr1_2:2014381-2014400 | Msa0048920:intron | 40.0% | |
CGTATTAACCTAGATTGTGC+AGG | + | chr1_2:2014475-2014494 | Msa0048920:intron | 40.0% | |
TATGTGATCCTGCACAATCT+AGG | - | chr1_2:2014486-2014505 | None:intergenic | 40.0% | |
TTGAACACTTCCCCTGTTAT+TGG | + | chr1_2:2014656-2014675 | Msa0048920:intron | 40.0% | |
AATGACGTGGACCAATAACA+GGG | - | chr1_2:2014670-2014689 | None:intergenic | 40.0% | |
AAATGACGTGGACCAATAAC+AGG | - | chr1_2:2014671-2014690 | None:intergenic | 40.0% | |
TTAGCCGGTTGCAAGTTAAA+TGG | - | chr1_2:2014705-2014724 | None:intergenic | 40.0% | |
GATTTGAGGAAAACGATGAG+TGG | - | chr1_2:2014782-2014801 | None:intergenic | 40.0% | |
AATTCCATGAGATTGGGTGA+GGG | + | chr1_2:2014929-2014948 | Msa0048920:intron | 40.0% | |
ACCAACACATTCCATCAACA+TGG | + | chr1_2:2015050-2015069 | Msa0048920:intron | 40.0% | |
! | ACCATGTTGATGGAATGTGT+TGG | - | chr1_2:2015054-2015073 | None:intergenic | 40.0% |
CAAGACAAACACCATGTTGA+TGG | - | chr1_2:2015064-2015083 | None:intergenic | 40.0% | |
TGATTGGAGAAGAAGACCAT+TGG | - | chr1_2:2015156-2015175 | None:intergenic | 40.0% | |
ATGTTCTGTTATGGAGAGGT+TGG | - | chr1_2:2015250-2015269 | None:intergenic | 40.0% | |
AGTGATGTTCTGTTATGGAG+AGG | - | chr1_2:2015254-2015273 | None:intergenic | 40.0% | |
! | GGTTATTGGTTAAGGGCTTA+GGG | - | chr1_2:2015283-2015302 | None:intergenic | 40.0% |
GGCTCATAATTGACAGATCT+TGG | - | chr1_2:2015313-2015332 | None:intergenic | 40.0% | |
CTGGTTATAGAAGATGTTGC+AGG | - | chr1_2:2015335-2015354 | None:intergenic | 40.0% | |
CTGCAACATCTTCTATAACC+AGG | + | chr1_2:2015333-2015352 | Msa0048920:intron | 40.0% | |
GCGGTGAGAATGAAAAGAAA+AGG | - | chr1_2:2015380-2015399 | None:intergenic | 40.0% | |
! | TTTCTTTTCATTCTCACCGC+GGG | + | chr1_2:2015380-2015399 | Msa0048920:intron | 40.0% |
ATTCGATGGTGTATATGGGT+CGG | - | chr1_2:2015412-2015431 | None:intergenic | 40.0% | |
GACAGATTCGATGGTGTATA+TGG | - | chr1_2:2015417-2015436 | None:intergenic | 40.0% | |
AAGGTTCATGACAGATTCGA+TGG | - | chr1_2:2015426-2015445 | None:intergenic | 40.0% | |
CTCACGTGTCACAAAACAAA+TGG | - | chr1_2:2015451-2015470 | None:intergenic | 40.0% | |
! | TACTTGTTAACCGAGTCAAC+CGG | - | chr1_2:2015554-2015573 | None:intergenic | 40.0% |
ATGAGTAAAGGGGAATGCTA+AGG | - | chr1_2:2015649-2015668 | None:intergenic | 40.0% | |
CCCACATGAGAAACAAATGA+AGG | - | chr1_2:2015696-2015715 | None:intergenic | 40.0% | |
TGAAACTGAAGCAAAAGCTG+AGG | + | chr1_2:2015776-2015795 | Msa0048920:CDS | 40.0% | |
!!! | TGAAATGCTTTTGGGGTGAA+TGG | + | chr1_2:2016033-2016052 | Msa0048920:three_prime_UTR | 40.0% |
TCCCTTACAGCTCTATACTA+GGG | - | chr1_2:2016071-2016090 | None:intergenic | 40.0% | |
TTCCCTTACAGCTCTATACT+AGG | - | chr1_2:2016072-2016091 | None:intergenic | 40.0% | |
AGAAAAGAATGGACGGAGGA+AGG | - | chr1_2:2013010-2013029 | None:intergenic | 45.0% | |
AGGAAGAAAAGAATGGACGG+AGG | - | chr1_2:2013014-2013033 | None:intergenic | 45.0% | |
TTCCCTTTGCCTCTCATAGT+CGG | + | chr1_2:2013052-2013071 | Msa0048920:five_prime_UTR | 45.0% | |
!! | GAAGCCATGAGTTTGGTGTT+TGG | - | chr1_2:2013171-2013190 | None:intergenic | 45.0% |
AAAAGAGGTCACAATGGAGC+TGG | + | chr1_2:2013304-2013323 | Msa0048920:CDS | 45.0% | |
! | AGGTGGAATGTTGGGTCTTT+TGG | - | chr1_2:2013390-2013409 | None:intergenic | 45.0% |
AGAACTTCTGCGTCTACAAC+GGG | - | chr1_2:2013450-2013469 | None:intergenic | 45.0% | |
GATTGGGGCTATGTTTGGAT+TGG | - | chr1_2:2013490-2013509 | None:intergenic | 45.0% | |
TTCTACGAAGGTTCTCTCCT+CGG | + | chr1_2:2013537-2013556 | Msa0048920:CDS | 45.0% | |
CTCAGTAACTGACATGACCT+CGG | - | chr1_2:2013594-2013613 | None:intergenic | 45.0% | |
ACGTGAGATGGTTCTTGATG+CGG | + | chr1_2:2013683-2013702 | Msa0048920:CDS | 45.0% | |
! | CAACTTGAACTCTTTGGCTC+AGG | + | chr1_2:2013828-2013847 | Msa0048920:CDS | 45.0% |
! | TTGAACTCTTTGGCTCAGGT+CGG | + | chr1_2:2013832-2013851 | Msa0048920:intron | 45.0% |
CATAGTCTCGGATATGTGCA+AGG | + | chr1_2:2014220-2014239 | Msa0048920:intron | 45.0% | |
GGTACTCTAGATAGAGTCGA+CGG | + | chr1_2:2014241-2014260 | Msa0048920:intron | 45.0% | |
!! | AGCGTACCTTTGAGGTGTTT+CGG | + | chr1_2:2014389-2014408 | Msa0048920:intron | 45.0% |
ATGACGTGGACCAATAACAG+GGG | - | chr1_2:2014669-2014688 | None:intergenic | 45.0% | |
GTCAAGCTCGGAGAAATCAT+GGG | + | chr1_2:2014837-2014856 | Msa0048920:intron | 45.0% | |
GAATTCCATGAGATTGGGTG+AGG | + | chr1_2:2014928-2014947 | Msa0048920:intron | 45.0% | |
! | ATGAGATTGGGTGAGGGTAT+GGG | + | chr1_2:2014935-2014954 | Msa0048920:intron | 45.0% |
! | CGGTTATTGGTTAAGGGCTT+AGG | - | chr1_2:2015284-2015303 | None:intergenic | 45.0% |
ACACGTGAGACTGAATGAAG+AGG | + | chr1_2:2015462-2015481 | Msa0048920:intron | 45.0% | |
GTGAGACTGAATGAAGAGGT+GGG | + | chr1_2:2015466-2015485 | Msa0048920:intron | 45.0% | |
TGAGACTGAATGAAGAGGTG+GGG | + | chr1_2:2015467-2015486 | Msa0048920:intron | 45.0% | |
! | CAAGTAGATGATGAGTTGGC+AGG | + | chr1_2:2015735-2015754 | Msa0048920:intron | 45.0% |
CCCTTACAGCTCTATACTAG+GGG | - | chr1_2:2016070-2016089 | None:intergenic | 45.0% | |
CCCCTAGTATAGAGCTGTAA+GGG | + | chr1_2:2016067-2016086 | Msa0048920:three_prime_UTR | 45.0% | |
!!! | TTTTATAATTTTTTATTAGT+GGG | - | chr1_2:2015513-2015532 | None:intergenic | 5.0% |
! | CACCGACTATGAGAGGCAAA+GGG | - | chr1_2:2013057-2013076 | None:intergenic | 50.0% |
!! | GTCATTGCACCGACTATGAG+AGG | - | chr1_2:2013064-2013083 | None:intergenic | 50.0% |
GTGCTAGGAAGCCATGAGTT+TGG | - | chr1_2:2013178-2013197 | None:intergenic | 50.0% | |
ACATCTCAGCTCCTCAGAAC+CGG | + | chr1_2:2013205-2013224 | Msa0048920:five_prime_UTR | 50.0% | |
!!! | AACGGGGAGGCTTGGTTTTA+AGG | - | chr1_2:2013433-2013452 | None:intergenic | 50.0% |
GAACTTCTGCGTCTACAACG+GGG | - | chr1_2:2013449-2013468 | None:intergenic | 50.0% | |
AGTAACTGACATGACCTCGG+TGG | - | chr1_2:2013591-2013610 | None:intergenic | 50.0% | |
AGTTACTGAGACTTCCGGCT+CGG | + | chr1_2:2013604-2013623 | Msa0048920:CDS | 50.0% | |
TCGCCACGTCAGACATTACT+CGG | - | chr1_2:2013662-2013681 | None:intergenic | 50.0% | |
GATGCGGCTGTTGATATTGC+TGG | + | chr1_2:2013699-2013718 | Msa0048920:CDS | 50.0% | |
!! | CACCGCTAGAGTTTTGTGGT+GGG | + | chr1_2:2013722-2013741 | Msa0048920:CDS | 50.0% |
GTCCCACCACAAAACTCTAG+CGG | - | chr1_2:2013727-2013746 | None:intergenic | 50.0% | |
!! | TACCTTTGAGGTGTTTCGGC+TGG | + | chr1_2:2014393-2014412 | Msa0048920:intron | 50.0% |
ATCCAGCCGAAACACCTCAA+AGG | - | chr1_2:2014398-2014417 | None:intergenic | 50.0% | |
ACCGCTTTCATCGTCAAGCT+CGG | + | chr1_2:2014825-2014844 | Msa0048920:intron | 50.0% | |
TCCGAGCTTGACGATGAAAG+CGG | - | chr1_2:2014829-2014848 | None:intergenic | 50.0% | |
CGTCAAGCTCGGAGAAATCA+TGG | + | chr1_2:2014836-2014855 | Msa0048920:intron | 50.0% | |
CATACCCTCACCCAATCTCA+TGG | - | chr1_2:2014936-2014955 | None:intergenic | 50.0% | |
CATGAGATTGGGTGAGGGTA+TGG | + | chr1_2:2014934-2014953 | Msa0048920:intron | 50.0% | |
CAATGAAGGCGGTGGTTGAT+TGG | - | chr1_2:2015172-2015191 | None:intergenic | 50.0% | |
!! | TGGAAGCACCTTAACACACC+TGG | - | chr1_2:2015354-2015373 | None:intergenic | 50.0% |
! | GGTGTGTTAAGGTGCTTCCA+TGG | + | chr1_2:2015354-2015373 | Msa0048920:intron | 50.0% |
CGTGAGACTGAATGAAGAGG+TGG | + | chr1_2:2015465-2015484 | Msa0048920:intron | 50.0% | |
ACAGATGCGCGTGTGTTAGA+TGG | + | chr1_2:2015604-2015623 | Msa0048920:intron | 50.0% | |
! | GATGATGAGTTGGCAGGTGA+AGG | + | chr1_2:2015741-2015760 | Msa0048920:CDS | 50.0% |
GCCCCTAGTATAGAGCTGTA+AGG | + | chr1_2:2016066-2016085 | Msa0048920:three_prime_UTR | 50.0% | |
!! | GCACCGACTATGAGAGGCAA+AGG | - | chr1_2:2013058-2013077 | None:intergenic | 55.0% |
GTGTTAACCCTCCGGTTCTG+AGG | - | chr1_2:2013219-2013238 | None:intergenic | 55.0% | |
!! | CGAAGAGCTTTAAGCCGAGC+CGG | - | chr1_2:2013621-2013640 | None:intergenic | 55.0% |
! | CGGCTCGGCTTAAAGCTCTT+CGG | + | chr1_2:2013619-2013638 | Msa0048920:CDS | 55.0% |
GAGCCGAGTAATGTCTGACG+TGG | + | chr1_2:2013656-2013675 | Msa0048920:CDS | 55.0% | |
TGACGTGGCGAAACGTGAGA+TGG | + | chr1_2:2013671-2013690 | Msa0048920:CDS | 55.0% | |
! | CTGGCACCGCTAGAGTTTTG+TGG | + | chr1_2:2013718-2013737 | Msa0048920:CDS | 55.0% |
!! | GCACCGCTAGAGTTTTGTGG+TGG | + | chr1_2:2013721-2013740 | Msa0048920:CDS | 55.0% |
GAGTTGGCAGGTGAAGGTGA+AGG | + | chr1_2:2015747-2015766 | Msa0048920:CDS | 55.0% | |
TCTCAGCTCCTCAGAACCGG+AGG | + | chr1_2:2013208-2013227 | Msa0048920:five_prime_UTR | 60.0% | |
CTCAGCTCCTCAGAACCGGA+GGG | + | chr1_2:2013209-2013228 | Msa0048920:five_prime_UTR | 60.0% | |
CTTCTGCGTCTACAACGGGG+AGG | - | chr1_2:2013446-2013465 | None:intergenic | 60.0% | |
CTTGGACAGGAGCTGAACCG+AGG | - | chr1_2:2013557-2013576 | None:intergenic | 60.0% | |
GGTTCAGCTCCTGTCCAAGC+CGG | + | chr1_2:2013558-2013577 | Msa0048920:CDS | 60.0% | |
GTTCAGCTCCTGTCCAAGCC+GGG | + | chr1_2:2013559-2013578 | Msa0048920:CDS | 60.0% | |
TATGGGTCGGTTGTGTCCCG+CGG | - | chr1_2:2015399-2015418 | None:intergenic | 60.0% | |
GCGTCTACAACGGGGAGGCT+TGG | - | chr1_2:2013441-2013460 | None:intergenic | 65.0% | |
TGACCTCGGTGGCTGAGACC+CGG | - | chr1_2:2013580-2013599 | None:intergenic | 65.0% | |
!! | GGCTGAGACCCGGCTTGGAC+AGG | - | chr1_2:2013570-2013589 | None:intergenic | 70.0% |
TCGGTGGCTGAGACCCGGCT+TGG | - | chr1_2:2013575-2013594 | None:intergenic | 70.0% | |
AAGCCGGGTCTCAGCCACCG+AGG | + | chr1_2:2013574-2013593 | Msa0048920:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 2012974 | 2016221 | 2012974 | ID=Msa0048920;Name=Msa0048920 |
chr1_2 | mRNA | 2012974 | 2016221 | 2012974 | ID=Msa0048920-mRNA-1;Parent=Msa0048920;Name=Msa0048920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=320|0|0.5|1|1|1|2|418|206 |
chr1_2 | exon | 2012974 | 2013849 | 2012974 | ID=Msa0048920-mRNA-1:exon:361;Parent=Msa0048920-mRNA-1 |
chr1_2 | exon | 2015739 | 2016221 | 2015739 | ID=Msa0048920-mRNA-1:exon:362;Parent=Msa0048920-mRNA-1 |
chr1_2 | five_prime_UTR | 2012974 | 2013293 | 2012974 | ID=Msa0048920-mRNA-1:five_prime_utr;Parent=Msa0048920-mRNA-1 |
chr1_2 | CDS | 2013294 | 2013849 | 2013294 | ID=Msa0048920-mRNA-1:cds;Parent=Msa0048920-mRNA-1 |
chr1_2 | CDS | 2015739 | 2015803 | 2015739 | ID=Msa0048920-mRNA-1:cds;Parent=Msa0048920-mRNA-1 |
chr1_2 | three_prime_UTR | 2015804 | 2016221 | 2015804 | ID=Msa0048920-mRNA-1:three_prime_utr;Parent=Msa0048920-mRNA-1 |
Gene Sequence |
Protein sequence |