Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295270 | XP_024632280.1 | 96.089 | 895 | 14 | 3 | 1 | 894 | 1 | 875 | 0.0 | 1764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295270 | sp|Q9LJR3|SPA3_ARATH | 60.596 | 906 | 283 | 14 | 1 | 894 | 1 | 844 | 0.0 | 1065 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295270 | G7IRA7 | 96.089 | 895 | 14 | 3 | 1 | 894 | 1 | 875 | 0.0 | 1764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006820 | Msa0295270 | 0.819178 | 1.330784e-52 | -8.615850e-47 |
| Msa0050500 | Msa0295270 | 0.807681 | 4.488552e-50 | -8.615850e-47 |
| Msa0100910 | Msa0295270 | 0.807196 | 5.688868e-50 | -8.615850e-47 |
| Msa0139740 | Msa0295270 | 0.827704 | 1.350415e-54 | -8.615850e-47 |
| Msa0175720 | Msa0295270 | 0.805606 | 1.231044e-49 | -8.615850e-47 |
| Msa0175900 | Msa0295270 | 0.812593 | 3.921906e-51 | -8.615850e-47 |
| Msa0206080 | Msa0295270 | 0.802652 | 5.068018e-49 | -8.615850e-47 |
| Msa0216010 | Msa0295270 | 0.805462 | 1.319751e-49 | -8.615850e-47 |
| Msa0263430 | Msa0295270 | 0.807232 | 5.590331e-50 | -8.615850e-47 |
| Msa0295270 | Msa0301020 | 0.805874 | 1.081004e-49 | -8.615850e-47 |
| Msa0295270 | Msa0377460 | 0.803970 | 2.703278e-49 | -8.615850e-47 |
| Msa0295270 | Msa0463540 | 0.807179 | 5.734365e-50 | -8.615850e-47 |
| Msa0295270 | Msa0464500 | 0.819380 | 1.197579e-52 | -8.615850e-47 |
| Msa0295270 | Msa0467800 | 0.808054 | 3.738927e-50 | -8.615850e-47 |
| Msa0295270 | Msa0467880 | 0.806385 | 8.441835e-50 | -8.615850e-47 |
| Msa0295270 | Msa0517400 | 0.803234 | 3.841835e-49 | -8.615850e-47 |
| Msa0295270 | Msa0601710 | 0.817677 | 2.912800e-52 | -8.615850e-47 |
| Msa0295270 | Msa0620090 | 0.851122 | 1.090142e-60 | -8.615850e-47 |
| Msa0295270 | Msa0659960 | 0.839165 | 1.865240e-57 | -8.615850e-47 |
| Msa0295270 | Msa0706530 | 0.857680 | 1.383518e-62 | -8.615850e-47 |
| Msa0295270 | Msa0736930 | 0.801163 | 1.025119e-48 | -8.615850e-47 |
| Msa0295270 | Msa0796450 | 0.821114 | 4.794357e-53 | -8.615850e-47 |
| Msa0295270 | Msa0821490 | 0.805688 | 1.183084e-49 | -8.615850e-47 |
| Msa0295270 | Msa0926860 | 0.808538 | 2.948750e-50 | -8.615850e-47 |
| Msa0295270 | Msa0981900 | 0.822656 | 2.108331e-53 | -8.615850e-47 |
| Msa0295270 | Msa0992570 | 0.828967 | 6.695074e-55 | -8.615850e-47 |
| Msa0295270 | Msa0992590 | 0.807504 | 4.894485e-50 | -8.615850e-47 |
| Msa0295270 | Msa1030280 | 0.822431 | 2.377496e-53 | -8.615850e-47 |
| Msa0295270 | Msa1195860 | 0.804910 | 1.721925e-49 | -8.615850e-47 |
| Msa0295270 | Msa1218720 | 0.805566 | 1.254593e-49 | -8.615850e-47 |
| Msa0295270 | Msa1238410 | 0.803944 | 2.737208e-49 | -8.615850e-47 |
| Msa0295270 | Msa1248400 | 0.823850 | 1.109041e-53 | -8.615850e-47 |
| Msa0295270 | Msa1327820 | 0.813359 | 2.664419e-51 | -8.615850e-47 |
| Msa0295270 | Msa1373590 | 0.821471 | 3.967010e-53 | -8.615850e-47 |
| Msa0295270 | Msa1397040 | 0.810598 | 1.064469e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295270 | MtrunA17_Chr2g0317491 | 96.089 | 895 | 14 | 3 | 1 | 894 | 1 | 875 | 0.0 | 1764 |
| Msa0295270 | MtrunA17_Chr5g0396821 | 39.576 | 849 | 391 | 18 | 77 | 894 | 277 | 1034 | 3.15e-177 | 543 |
| Msa0295270 | MtrunA17_Chr8g0347471 | 38.471 | 850 | 433 | 15 | 77 | 894 | 196 | 987 | 3.49e-176 | 538 |
| Msa0295270 | MtrunA17_Chr5g0438901 | 36.364 | 583 | 289 | 10 | 335 | 891 | 147 | 673 | 8.83e-112 | 360 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295270 | AT3G15354.3 | 60.596 | 906 | 283 | 14 | 1 | 894 | 1 | 844 | 0.0 | 1065 |
| Msa0295270 | AT3G15354.1 | 59.713 | 906 | 283 | 14 | 1 | 894 | 1 | 836 | 0.0 | 1045 |
| Msa0295270 | AT1G53090.3 | 58.681 | 910 | 244 | 21 | 1 | 894 | 1 | 794 | 0.0 | 971 |
| Msa0295270 | AT1G53090.1 | 58.681 | 910 | 244 | 21 | 1 | 894 | 1 | 794 | 0.0 | 971 |
| Msa0295270 | AT1G53090.2 | 58.681 | 910 | 244 | 21 | 1 | 894 | 1 | 794 | 0.0 | 971 |
| Msa0295270 | AT3G15354.4 | 64.773 | 616 | 184 | 8 | 290 | 894 | 1 | 594 | 0.0 | 809 |
| Msa0295270 | AT3G15354.5 | 64.773 | 616 | 184 | 8 | 290 | 894 | 1 | 594 | 0.0 | 809 |
| Msa0295270 | AT3G15354.2 | 57.977 | 702 | 240 | 13 | 1 | 690 | 1 | 659 | 0.0 | 761 |
| Msa0295270 | AT1G53090.4 | 63.754 | 618 | 166 | 11 | 290 | 894 | 1 | 573 | 0.0 | 758 |
| Msa0295270 | AT1G53090.5 | 55.853 | 709 | 200 | 20 | 1 | 693 | 1 | 612 | 0.0 | 675 |
| Msa0295270 | AT2G46340.1 | 39.618 | 838 | 403 | 18 | 77 | 894 | 275 | 1029 | 1.33e-178 | 546 |
| Msa0295270 | AT2G46340.2 | 39.618 | 838 | 403 | 18 | 77 | 894 | 275 | 1029 | 1.33e-178 | 546 |
| Msa0295270 | AT4G11110.1 | 37.923 | 828 | 412 | 15 | 77 | 894 | 301 | 1036 | 1.72e-175 | 538 |
| Msa0295270 | AT2G32950.2 | 34.729 | 573 | 301 | 10 | 343 | 891 | 35 | 558 | 1.13e-108 | 348 |
| Msa0295270 | AT2G32950.1 | 35.079 | 573 | 299 | 9 | 343 | 891 | 148 | 671 | 2.55e-107 | 348 |
| Msa0295270 | AT5G52250.1 | 35.207 | 338 | 182 | 12 | 564 | 891 | 70 | 380 | 3.00e-48 | 177 |
| Msa0295270 | AT5G23730.1 | 34.203 | 345 | 183 | 14 | 566 | 890 | 41 | 361 | 4.74e-46 | 170 |
| Msa0295270 | AT2G43770.1 | 24.214 | 318 | 196 | 12 | 568 | 870 | 56 | 343 | 4.02e-12 | 69.3 |
| Msa0295270 | AT2G32700.2 | 24.348 | 230 | 141 | 7 | 564 | 792 | 510 | 707 | 3.52e-11 | 67.8 |
| Msa0295270 | AT2G32700.5 | 24.348 | 230 | 141 | 7 | 564 | 792 | 510 | 707 | 3.52e-11 | 67.8 |
| Msa0295270 | AT2G32700.1 | 24.348 | 230 | 141 | 7 | 564 | 792 | 510 | 707 | 3.52e-11 | 67.8 |
| Msa0295270 | AT2G32700.4 | 24.348 | 230 | 141 | 7 | 564 | 792 | 510 | 707 | 3.52e-11 | 67.8 |
| Msa0295270 | AT2G32700.3 | 24.348 | 230 | 141 | 7 | 564 | 792 | 510 | 707 | 3.52e-11 | 67.8 |
| Msa0295270 | AT2G32700.6 | 24.348 | 230 | 141 | 7 | 564 | 792 | 508 | 705 | 3.61e-11 | 67.8 |
| Msa0295270 | AT2G32700.7 | 24.348 | 230 | 141 | 7 | 564 | 792 | 529 | 726 | 3.82e-11 | 67.8 |
Find 215 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAACACAGATCCAATTTC+TGG | 0.186809 | 2_3:-47779478 | Msa0295270:CDS |
| TCCACTTCGTTACCAGAAAT+TGG | 0.194531 | 2_3:+47779466 | None:intergenic |
| CCCTCATTTCAGATAGTATT+TGG | 0.203996 | 2_3:+47780481 | None:intergenic |
| GTGGCAAATTCTTATCAATT+TGG | 0.218331 | 2_3:-47784053 | Msa0295270:five_prime_UTR |
| TTTAAATCTAGTTTGCTTCT+TGG | 0.245768 | 2_3:+47781573 | None:intergenic |
| TGCATGAGTGTAAAACAATT+TGG | 0.263218 | 2_3:-47783678 | Msa0295270:five_prime_UTR |
| CTGTGGAATTTGCGGCGATT+AGG | 0.275676 | 2_3:+47779392 | None:intergenic |
| TCTAGGGCTTTGAATAGTTC+TGG | 0.281809 | 2_3:-47783569 | Msa0295270:CDS |
| TGTGGAATTTGCGGCGATTA+GGG | 0.286185 | 2_3:+47779393 | None:intergenic |
| CGGACAACACTTTGAAGCTT+TGG | 0.288842 | 2_3:-47780004 | Msa0295270:CDS |
| GATACCAGCTCAGATTCTTT+AGG | 0.297395 | 2_3:-47783167 | Msa0295270:CDS |
| CTGATTCAATAAACGATATA+TGG | 0.308875 | 2_3:+47783201 | None:intergenic |
| AGGAGAATTCTGAGAGTTCT+AGG | 0.309091 | 2_3:-47783586 | Msa0295270:CDS |
| CACAGGGAATGTCAAGATTC+TGG | 0.313427 | 2_3:-47779374 | Msa0295270:CDS |
| GCGAGGGATCACAAGATTCT+AGG | 0.323621 | 2_3:-47783508 | Msa0295270:CDS |
| GGAGTACCAGCAACCTCTTC+AGG | 0.326596 | 2_3:+47782837 | None:intergenic |
| ATCAAAATAATCACCAACTA+TGG | 0.332039 | 2_3:-47778568 | Msa0295270:CDS |
| GGACAACACTTTGAAGCTTT+GGG | 0.345308 | 2_3:-47780003 | Msa0295270:CDS |
| CAACGAACAAAGAGATGATA+TGG | 0.349512 | 2_3:-47781749 | Msa0295270:CDS |
| GCAAAAGATCTCCTTGCTTC+AGG | 0.354806 | 2_3:+47781092 | None:intergenic |
| AAATCAGCTGGAGGATTAGA+AGG | 0.360664 | 2_3:+47778330 | None:intergenic |
| AGCGAGGATTCTGCTTGTTT+AGG | 0.362416 | 2_3:-47781478 | Msa0295270:CDS |
| CTGCCACTCGCCAACATTGT+TGG | 0.363402 | 2_3:+47780414 | None:intergenic |
| CACTTGCGCTGTCCCTTCCT+TGG | 0.364181 | 2_3:+47781185 | None:intergenic |
| TTTCAGTAAGCTTAAAGTTA+AGG | 0.364391 | 2_3:-47781119 | Msa0295270:CDS |
| TCCGCTAGATACCTTGCATT+TGG | 0.366580 | 2_3:-47780158 | Msa0295270:CDS |
| AAGGAAAGGGATTGGATTCA+TGG | 0.376493 | 2_3:-47783479 | Msa0295270:CDS |
| GCTTCAGATGTTTACCGATT+GGG | 0.378627 | 2_3:-47782804 | Msa0295270:CDS |
| CGAAACTGAGTGAGCATACT+AGG | 0.382859 | 2_3:+47781059 | None:intergenic |
| CGGTAGTGGAGATGGCTTGC+AGG | 0.382964 | 2_3:-47780937 | Msa0295270:CDS |
| CCGAGCATCCGTCGAAATCT+TGG | 0.388807 | 2_3:+47783034 | None:intergenic |
| TTATGTTATGTACCTCAAAA+AGG | 0.394788 | 2_3:+47782775 | None:intergenic |
| TTCTAGGTTTAGAAAGGAAA+GGG | 0.399429 | 2_3:-47783492 | Msa0295270:CDS |
| CATACATAGATATATATAGT+AGG | 0.400457 | 2_3:+47778905 | None:intergenic |
| TAATCACCAACTATGGACTA+TGG | 0.402900 | 2_3:-47778561 | Msa0295270:CDS |
| AAGAAAATAAAATGAAAGAT+AGG | 0.405637 | 2_3:-47782944 | Msa0295270:CDS |
| GACATTCCCTGTGGAATTTG+CGG | 0.411834 | 2_3:+47779384 | None:intergenic |
| AGTTTGTCTCCTCGGTTTGT+TGG | 0.414246 | 2_3:-47779432 | Msa0295270:CDS |
| ATGCTGTGTTCAGTTTCCTC+TGG | 0.417797 | 2_3:-47780183 | Msa0295270:CDS |
| ATTATGCATCAGCAGAGTTT+CGG | 0.426090 | 2_3:-47783077 | Msa0295270:CDS |
| TATTGAATCAGCTTCTTGTT+CGG | 0.430659 | 2_3:-47783189 | Msa0295270:CDS |
| GGATAAACTTTAGTCCTTTG+TGG | 0.430838 | 2_3:-47784032 | Msa0295270:five_prime_UTR |
| ACTAGATTTAAAGAGATTGC+TGG | 0.434198 | 2_3:-47781562 | Msa0295270:CDS |
| GTGCCGCTTTGCACTTTAGT+TGG | 0.435655 | 2_3:-47780089 | Msa0295270:CDS |
| TTCAGGTTGTTAACTTTGAC+TGG | 0.435846 | 2_3:-47783814 | Msa0295270:intron |
| GAGATTGCTGGCGTTGAACT+AGG | 0.437162 | 2_3:-47781550 | Msa0295270:CDS |
| TCCCGGTCTTCCTGAGGAAT+AGG | 0.439035 | 2_3:+47781294 | None:intergenic |
| CACTGGTCACACAAATGTTA+AGG | 0.441780 | 2_3:-47779931 | Msa0295270:intron |
| GATGAAACAGATACTTCTAA+TGG | 0.445082 | 2_3:-47782880 | Msa0295270:CDS |
| TCAGCGGGAGGATCCGCAAT+TGG | 0.448780 | 2_3:+47778239 | None:intergenic |
| GAGGCAATGGCTGGATAAAC+CGG | 0.450470 | 2_3:-47783354 | Msa0295270:CDS |
| ACAAGATTCTAGGTTTAGAA+AGG | 0.452039 | 2_3:-47783498 | Msa0295270:CDS |
| GGTTTAGAAAGGAAAGGGAT+TGG | 0.452703 | 2_3:-47783487 | Msa0295270:CDS |
| CCTAGTGTTGGACGACTGCT+AGG | 0.455318 | 2_3:+47782263 | None:intergenic |
| TAGATACCTTGCATTTGGTT+CGG | 0.456079 | 2_3:-47780153 | Msa0295270:CDS |
| TCTGATGGTTATATTGCTAC+TGG | 0.459300 | 2_3:-47779756 | Msa0295270:CDS |
| ATCCTATTCCTCAGGAAGAC+CGG | 0.459568 | 2_3:-47781296 | Msa0295270:CDS |
| CTACTATATATATCTATGTA+TGG | 0.459894 | 2_3:-47778904 | Msa0295270:CDS |
| TGCCACACAGTTTGTCTCCT+CGG | 0.462131 | 2_3:-47779440 | Msa0295270:CDS |
| TGCTTCAGATGTTTACCGAT+TGG | 0.466209 | 2_3:-47782805 | Msa0295270:CDS |
| GAAGGGACAGCGCAAGTGCT+TGG | 0.468483 | 2_3:-47781180 | Msa0295270:CDS |
| CCATCTCCACTACCGGATAG+TGG | 0.470298 | 2_3:+47780945 | None:intergenic |
| GATTCACCATAGTCCATAGT+TGG | 0.471951 | 2_3:+47778555 | None:intergenic |
| AAGAAATCCACCGATCGATC+CGG | 0.472606 | 2_3:+47783335 | None:intergenic |
| GCCAAATACTATCTGAAATG+AGG | 0.473156 | 2_3:-47780482 | Msa0295270:CDS |
| TATTAGTTTGAGGCAATGGC+TGG | 0.473623 | 2_3:-47783363 | Msa0295270:CDS |
| TTGCACAAACCCTCAAGAAA+AGG | 0.481493 | 2_3:+47781151 | None:intergenic |
| TAGGAGGAAGGATGAAGAAG+TGG | 0.482637 | 2_3:-47782925 | Msa0295270:CDS |
| ATACATAGATATATATAGTA+GGG | 0.484289 | 2_3:+47778906 | None:intergenic |
| CCAAGATTTCGACGGATGCT+CGG | 0.485967 | 2_3:-47783034 | Msa0295270:CDS |
| CTTCAGATGTTTACCGATTG+GGG | 0.486473 | 2_3:-47782803 | Msa0295270:CDS |
| TGAAACTTGAATTGTAATGC+TGG | 0.489153 | 2_3:+47779499 | None:intergenic |
| AGCTCAGATTCTTTAGGAGA+TGG | 0.489447 | 2_3:-47783161 | Msa0295270:CDS |
| CCTAGCAGTCGTCCAACACT+AGG | 0.490972 | 2_3:-47782263 | Msa0295270:CDS |
| CTCCACAGTTACTTCTAAAG+TGG | 0.491713 | 2_3:-47782328 | Msa0295270:CDS |
| TTGTGTTAACAAGGTGATGA+TGG | 0.494816 | 2_3:-47783704 | Msa0295270:five_prime_UTR |
| ATGACAGGTTTCAAATCAGC+TGG | 0.498086 | 2_3:+47778318 | None:intergenic |
| TTGAATTGTAATGCTGGCAT+AGG | 0.499477 | 2_3:+47779505 | None:intergenic |
| TAAGCTATGGAGTATCAATC+AGG | 0.501434 | 2_3:-47780376 | Msa0295270:CDS |
| GTTGGACGACTGCTAGGGTC+AGG | 0.502364 | 2_3:+47782269 | None:intergenic |
| GGGAGTTAGACATTCGCATA+TGG | 0.507924 | 2_3:-47781275 | Msa0295270:CDS |
| TGTGATCCCTCGCCGGAGAA+AGG | 0.508129 | 2_3:+47783518 | None:intergenic |
| CAAAGCTGAGCAGTTTATGT+TGG | 0.508521 | 2_3:-47780913 | Msa0295270:CDS |
| CATTTGGTTCGGCAGATCAC+CGG | 0.510202 | 2_3:-47780142 | Msa0295270:CDS |
| CAAAGGGAAAATCCTTTCTC+CGG | 0.511339 | 2_3:-47783530 | Msa0295270:CDS |
| ACTAGTCCTGAAGAGGTTGC+TGG | 0.512720 | 2_3:-47782843 | Msa0295270:CDS |
| TTCTTTGTTTAAGTAATGAA+AGG | 0.514247 | 2_3:+47781662 | None:intergenic |
| CCACTATCCGGTAGTGGAGA+TGG | 0.514371 | 2_3:-47780945 | Msa0295270:CDS |
| AGACATTCGCATATGGCAAA+TGG | 0.515304 | 2_3:-47781268 | Msa0295270:CDS |
| TACTTCTAATGGAGATGAGT+TGG | 0.516417 | 2_3:-47782869 | Msa0295270:CDS |
| TGTCATTACACCTTCAATTG+TGG | 0.516570 | 2_3:-47778301 | Msa0295270:CDS |
| GAATTTGCGGCGATTAGGGT+TGG | 0.517554 | 2_3:+47779397 | None:intergenic |
| TGCAAACCATCCTATTCCTC+AGG | 0.518455 | 2_3:-47781304 | Msa0295270:CDS |
| GCAGAAGGATCCACAATTGA+AGG | 0.523577 | 2_3:+47778291 | None:intergenic |
| ACGATAAATTACCCTAGTGT+TGG | 0.524771 | 2_3:+47782251 | None:intergenic |
| ATTAGAAGTATCTGTTTCAT+CGG | 0.525069 | 2_3:+47782882 | None:intergenic |
| TAGGAACTAGAAAACGAGTC+AGG | 0.527112 | 2_3:-47781459 | Msa0295270:CDS |
| AATGGGGTGATATTAGTTTG+AGG | 0.528270 | 2_3:-47783373 | Msa0295270:CDS |
| CTATCAATGACTGTCATGGA+TGG | 0.529305 | 2_3:+47781499 | None:intergenic |
| AAGCAAAATGAAGCTTCCTT+AGG | 0.530700 | 2_3:+47782305 | None:intergenic |
| ATCATCAAAGTTAATAAATG+AGG | 0.532046 | 2_3:+47784084 | None:intergenic |
| GCTGGATAAACCGGATCGAT+CGG | 0.532948 | 2_3:-47783345 | Msa0295270:CDS |
| ACATCTGAAGCACATGAACT+AGG | 0.533132 | 2_3:+47782816 | None:intergenic |
| GAATTGTGATCAAGAGAGAT+TGG | 0.533596 | 2_3:-47783777 | Msa0295270:five_prime_UTR |
| ACAATTGAAGGTGTAATGAC+AGG | 0.534543 | 2_3:+47778303 | None:intergenic |
| GTGATATTAGTTTGAGGCAA+TGG | 0.534643 | 2_3:-47783367 | Msa0295270:CDS |
| GGACCGTGATATCCACTATC+CGG | 0.534843 | 2_3:-47780957 | Msa0295270:CDS |
| GAATGTCAAGATTCTGGAGA+TGG | 0.535353 | 2_3:-47779368 | Msa0295270:intron |
| ACTAGAAAACGAGTCAGGCT+AGG | 0.535758 | 2_3:-47781454 | Msa0295270:CDS |
| CTAATCGCCGCAAATTCCAC+AGG | 0.536941 | 2_3:-47779391 | Msa0295270:CDS |
| ATTCTAGGTTTAGAAAGGAA+AGG | 0.537012 | 2_3:-47783493 | Msa0295270:CDS |
| TATCATCTCTTTGTTCGTTG+AGG | 0.537830 | 2_3:+47781752 | None:intergenic |
| TCCTATTCCTCAGGAAGACC+GGG | 0.538229 | 2_3:-47781295 | Msa0295270:CDS |
| GTAGATCATAGTAATATATC+CGG | 0.539126 | 2_3:+47780123 | None:intergenic |
| CCAAATACTATCTGAAATGA+GGG | 0.542104 | 2_3:-47780481 | Msa0295270:CDS |
| GAAAATCCTTTCTCCGGCGA+GGG | 0.544427 | 2_3:-47783524 | Msa0295270:CDS |
| AGATTGCTGGCGTTGAACTA+GGG | 0.545351 | 2_3:-47781549 | Msa0295270:CDS |
| CAACCTTGTCTCTGCATCCA+CGG | 0.545526 | 2_3:-47780024 | Msa0295270:CDS |
| TGGCGTTGAAAGACCAAGGA+AGG | 0.546185 | 2_3:-47781198 | Msa0295270:CDS |
| ATGTGATACAATCATAAAAG+AGG | 0.546241 | 2_3:-47780978 | Msa0295270:CDS |
| AAAATAAAATGAAAGATAGG+AGG | 0.548573 | 2_3:-47782941 | Msa0295270:CDS |
| GTCTCCTCGGTTTGTTGGCG+CGG | 0.549529 | 2_3:-47779427 | Msa0295270:CDS |
| ACTAATATCACCCCATTCAA+CGG | 0.550242 | 2_3:+47783379 | None:intergenic |
| TGAATTGTAATGCTGGCATA+GGG | 0.551515 | 2_3:+47779506 | None:intergenic |
| GTTACTTCTAAAGTGGCCTA+AGG | 0.552782 | 2_3:-47782321 | Msa0295270:CDS |
| GGAGAATTCTGAGAGTTCTA+GGG | 0.554319 | 2_3:-47783585 | Msa0295270:CDS |
| ACGACGGTTCAGTTAAGCTA+TGG | 0.554543 | 2_3:-47780389 | Msa0295270:CDS |
| TTCTCTTCTCTTGAGCTCAG+TGG | 0.555018 | 2_3:+47782389 | None:intergenic |
| TCGCCGATTCAATCGTTCAC+TGG | 0.555130 | 2_3:-47779948 | Msa0295270:CDS |
| TAGACAAAAGATAGAAGATG+AGG | 0.557935 | 2_3:-47781701 | Msa0295270:CDS |
| AGGAAGGATGAAGAAGTGGA+AGG | 0.557944 | 2_3:-47782921 | Msa0295270:CDS |
| CTGCAAGCCATCTCCACTAC+CGG | 0.557989 | 2_3:+47780938 | None:intergenic |
| AAGAAGTTGCATCAATAACT+TGG | 0.558161 | 2_3:-47781218 | Msa0295270:CDS |
| GTGGGATTATCAGTATCTGA+TGG | 0.558219 | 2_3:-47779771 | Msa0295270:CDS |
| CTCGCTATCAATGACTGTCA+TGG | 0.558808 | 2_3:+47781495 | None:intergenic |
| CATATGGCAAATGGTGGGAG+AGG | 0.560351 | 2_3:-47781259 | Msa0295270:CDS |
| ATCAGAAGATCCAACAATGT+TGG | 0.562973 | 2_3:-47780424 | Msa0295270:CDS |
| ATAGTTCTGGAGTCTCAGAT+AGG | 0.563617 | 2_3:-47783556 | Msa0295270:CDS |
| ATCTCCTAAAGAATCTGAGC+TGG | 0.565194 | 2_3:+47783163 | None:intergenic |
| GCATCCGTCGAAATCTTGGC+AGG | 0.567107 | 2_3:+47783038 | None:intergenic |
| CTAGAAAACGAGTCAGGCTA+GGG | 0.569677 | 2_3:-47781453 | Msa0295270:CDS |
| TAAAATGAAAGATAGGAGGA+AGG | 0.572736 | 2_3:-47782937 | Msa0295270:CDS |
| TGATATCCACTATCCGGTAG+TGG | 0.574433 | 2_3:-47780951 | Msa0295270:CDS |
| ACTGAGTGAGCATACTAGGT+TGG | 0.574949 | 2_3:+47781063 | None:intergenic |
| TATGCCTGCCAAGATTTCGA+CGG | 0.577851 | 2_3:-47783042 | Msa0295270:CDS |
| ATTAATTGCACCTCCAATTG+CGG | 0.582846 | 2_3:-47778252 | Msa0295270:CDS |
| AGAATCTTGTGATCCCTCGC+CGG | 0.584092 | 2_3:+47783511 | None:intergenic |
| AGTCTCAGATAGGAACCAAA+GGG | 0.584235 | 2_3:-47783546 | Msa0295270:CDS |
| TTGGCGAGTGGCAGCGACGA+CGG | 0.584707 | 2_3:-47780405 | Msa0295270:CDS |
| CATTCAACGGAACAAAAGAA+AGG | 0.584815 | 2_3:+47783392 | None:intergenic |
| ACTTTGATGATGTGTGGTGG+TGG | 0.585646 | 2_3:-47784072 | Msa0295270:five_prime_UTR |
| CATTCGCATATGGCAAATGG+TGG | 0.586354 | 2_3:-47781265 | Msa0295270:CDS |
| GATTGGATTCATGGTGCACA+AGG | 0.586798 | 2_3:-47783470 | Msa0295270:CDS |
| GCGGGAGGATCCGCAATTGG+AGG | 0.589372 | 2_3:+47778242 | None:intergenic |
| TCCAATTTCTGGTAACGAAG+TGG | 0.592211 | 2_3:-47779467 | Msa0295270:CDS |
| ATATGCGAATGTCTAACTCC+CGG | 0.593042 | 2_3:+47781277 | None:intergenic |
| GGATAAACCGGATCGATCGG+TGG | 0.596576 | 2_3:-47783342 | Msa0295270:CDS |
| GTTAAGGCTGACCTGAAGCA+AGG | 0.599999 | 2_3:-47781103 | Msa0295270:CDS |
| GGTCTTCCTGAGGAATAGGA+TGG | 0.601956 | 2_3:+47781298 | None:intergenic |
| GAAAGACGACATGACAAAGC+AGG | 0.603503 | 2_3:+47783226 | None:intergenic |
| TTATTGCAGGGAGTTAGTAT+CGG | 0.604289 | 2_3:-47780230 | Msa0295270:intron |
| CTGAAATGAGGGAGCACGAG+CGG | 0.606838 | 2_3:-47780470 | Msa0295270:CDS |
| CTGGCATAGGGAAGGCCTTG+TGG | 0.608565 | 2_3:+47779518 | None:intergenic |
| GGGAGCACGAGCGGCGAGTG+TGG | 0.609522 | 2_3:-47780461 | Msa0295270:CDS |
| TCACGAGGACAGTGAGATGT+CGG | 0.610989 | 2_3:+47783101 | None:intergenic |
| TTAACTTTGATGATGTGTGG+TGG | 0.612056 | 2_3:-47784075 | Msa0295270:five_prime_UTR |
| TTATTAACTTTGATGATGTG+TGG | 0.613791 | 2_3:-47784078 | Msa0295270:five_prime_UTR |
| TCTGACTTCATATCAGCAGA+AGG | 0.614819 | 2_3:+47778276 | None:intergenic |
| GAGTCTCAGATAGGAACCAA+AGG | 0.614873 | 2_3:-47783547 | Msa0295270:CDS |
| TGACCAGTGAACGATTGAAT+CGG | 0.616721 | 2_3:+47779945 | None:intergenic |
| TTGTAATGCTGGCATAGGGA+AGG | 0.617129 | 2_3:+47779510 | None:intergenic |
| GTTAATGCAGCACACTGTCA+AGG | 0.619174 | 2_3:-47783275 | Msa0295270:CDS |
| GGAAAATCCTTTCTCCGGCG+AGG | 0.620236 | 2_3:-47783525 | Msa0295270:CDS |
| TAAACTTTAGTCCTTTGTGG+AGG | 0.621830 | 2_3:-47784029 | Msa0295270:intron |
| CTAGTGTTGGACGACTGCTA+GGG | 0.623492 | 2_3:+47782264 | None:intergenic |
| TTGGTACACTAGTCCTGAAG+AGG | 0.623536 | 2_3:-47782850 | Msa0295270:CDS |
| CATGACAGTCATTGATAGCG+AGG | 0.625323 | 2_3:-47781494 | Msa0295270:CDS |
| ATATGGCAAATGGTGGGAGA+GGG | 0.625910 | 2_3:-47781258 | Msa0295270:CDS |
| TACATAGATATATATAGTAG+GGG | 0.632932 | 2_3:+47778907 | None:intergenic |
| TCACTCAGTTTCGACCGTGA+TGG | 0.639507 | 2_3:-47781049 | Msa0295270:CDS |
| ACCAAATGCAAGGTATCTAG+CGG | 0.642602 | 2_3:+47780157 | None:intergenic |
| ACAGGTTTCAAATCAGCTGG+AGG | 0.643077 | 2_3:+47778321 | None:intergenic |
| GCTGTCAAGTGCTGTGTACG+CGG | 0.643091 | 2_3:-47782994 | Msa0295270:CDS |
| CACTTTAGAAGTAACTGTGG+AGG | 0.645029 | 2_3:+47782329 | None:intergenic |
| ATTCGCATATGGCAAATGGT+GGG | 0.647878 | 2_3:-47781264 | Msa0295270:CDS |
| CTGACCGCGCCAACAAACCG+AGG | 0.651526 | 2_3:+47779423 | None:intergenic |
| CTAGCAGTCGTCCAACACTA+GGG | 0.652200 | 2_3:-47782262 | Msa0295270:intron |
| TCTAACTCCCGGTCTTCCTG+AGG | 0.654026 | 2_3:+47781288 | None:intergenic |
| TTTAGTTGGACATAATAAGA+CGG | 0.654445 | 2_3:-47780075 | Msa0295270:CDS |
| GGCCACTTTAGAAGTAACTG+TGG | 0.654479 | 2_3:+47782326 | None:intergenic |
| CTACCGGATAGTGGATATCA+CGG | 0.655506 | 2_3:+47780954 | None:intergenic |
| AACTTGGCGTTGAAAGACCA+AGG | 0.659281 | 2_3:-47781202 | Msa0295270:CDS |
| AAGCTTCAAAGTGTTGTCCG+TGG | 0.661126 | 2_3:+47780007 | None:intergenic |
| GATCCAACAATGTTGGCGAG+TGG | 0.662196 | 2_3:-47780417 | Msa0295270:CDS |
| GGCGTTGAAAGACCAAGGAA+GGG | 0.666537 | 2_3:-47781197 | Msa0295270:CDS |
| CAACGACCAAGGAGGTGTTG+AGG | 0.668571 | 2_3:-47783132 | Msa0295270:CDS |
| CGATGAATGTGATGATAACG+TGG | 0.669699 | 2_3:-47781422 | Msa0295270:CDS |
| TATCGGTACCATCAAAACGA+AGG | 0.669721 | 2_3:-47780213 | Msa0295270:CDS |
| TGTCCGTGGATGCAGAGACA+AGG | 0.670812 | 2_3:+47780021 | None:intergenic |
| GACGACATGACAAAGCAGGA+AGG | 0.671729 | 2_3:+47783230 | None:intergenic |
| TACTGGTTCAGAGACAAATG+AGG | 0.673770 | 2_3:-47779739 | Msa0295270:intron |
| GATCTGCCGAACCAAATGCA+AGG | 0.678717 | 2_3:+47780147 | None:intergenic |
| CAGAATCTTGACATTCCCTG+TGG | 0.680031 | 2_3:+47779375 | None:intergenic |
| AAAACACATAACCTCCACAA+AGG | 0.680691 | 2_3:+47784018 | None:intergenic |
| ATGGAAAAGTTGATGCTGAA+CGG | 0.681431 | 2_3:+47781518 | None:intergenic |
| GATGGAGTAAACAACGACCA+AGG | 0.692153 | 2_3:-47783143 | Msa0295270:CDS |
| AGGTATCTAGCGGAATCCAG+AGG | 0.693051 | 2_3:+47780167 | None:intergenic |
| GTGTTGTTGTTCATAATGTG+AGG | 0.694957 | 2_3:-47783253 | Msa0295270:CDS |
| TGCTGATGCATAATATCACG+AGG | 0.702535 | 2_3:+47783086 | None:intergenic |
| TAATCGCCGCAAATTCCACA+GGG | 0.703478 | 2_3:-47779390 | Msa0295270:CDS |
| TTAGGTGTTCGTATACCACA+AGG | 0.715195 | 2_3:-47779533 | Msa0295270:intron |
| TGTCCAACTAAAGTGCAAAG+CGG | 0.727757 | 2_3:+47780086 | None:intergenic |
| AACCGAGGAGACAAACTGTG+TGG | 0.732363 | 2_3:+47779438 | None:intergenic |
| AGAGGAGTTTGTGATAGCTG+AGG | 0.751704 | 2_3:-47778847 | Msa0295270:intron |
| GGAGTAAACAACGACCAAGG+AGG | 0.765141 | 2_3:-47783140 | Msa0295270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTATTTTGTTTAAAAAA+AGG | - | chr2_3:47782799-47782818 | Msa0295270:CDS | 10.0% |
| !! | TAAAATAAGAATAAAAATCA+TGG | - | chr2_3:47783717-47783736 | Msa0295270:five_prime_UTR | 10.0% |
| !! | AAAATAAGAATAAAAATCAT+GGG | - | chr2_3:47783718-47783737 | Msa0295270:five_prime_UTR | 10.0% |
| !! | AAGAAAATAAAATGAAAGAT+AGG | - | chr2_3:47779447-47779466 | Msa0295270:CDS | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | - | chr2_3:47780348-47780367 | Msa0295270:CDS | 15.0% |
| !! | ATATGAAGTTTATTATGATT+AGG | + | chr2_3:47780500-47780519 | None:intergenic | 15.0% |
| !!! | TTTTGTATATATATTAATGC+TGG | - | chr2_3:47782105-47782124 | Msa0295270:intron | 15.0% |
| !! | TATATGAATCATTTATAGAT+TGG | + | chr2_3:47783071-47783090 | None:intergenic | 15.0% |
| !! | TATTCAATTGTTATATATAG+AGG | - | chr2_3:47783113-47783132 | Msa0295270:CDS | 15.0% |
| !! | ATTCAATTGTTATATATAGA+GGG | - | chr2_3:47783114-47783133 | Msa0295270:CDS | 15.0% |
| !! | TTATTATTGTTAGATTATAG+CGG | - | chr2_3:47783191-47783210 | Msa0295270:CDS | 15.0% |
| !! | ATACATAGATATATATAGTA+GGG | + | chr2_3:47783488-47783507 | None:intergenic | 15.0% |
| !! | AAACTATAACATAATTAACT+TGG | - | chr2_3:47783923-47783942 | Msa0295270:intron | 15.0% |
| !! | GTTTAAGAAAAATTAGTAAA+GGG | + | chr2_3:47784020-47784039 | None:intergenic | 15.0% |
| !! | TGTTTAAGAAAAATTAGTAA+AGG | + | chr2_3:47784021-47784040 | None:intergenic | 15.0% |
| !! | ATCATCAAAGTTAATAAATG+AGG | + | chr2_3:47778310-47778329 | None:intergenic | 20.0% |
| !!! | TGAATAAAGTTTTTGAATTC+AGG | - | chr2_3:47778560-47778579 | Msa0295270:CDS | 20.0% |
| !!! | TCTTGATATTGATTTTTTGT+TGG | - | chr2_3:47778637-47778656 | Msa0295270:intron | 20.0% |
| !!! | ATATTTTAAGTGGATAAAGA+TGG | - | chr2_3:47778782-47778801 | Msa0295270:intron | 20.0% |
| !! | AAAATAAAATGAAAGATAGG+AGG | - | chr2_3:47779450-47779469 | Msa0295270:CDS | 20.0% |
| !!! | TTTTTTTATTTGAGCTTTGT+TGG | - | chr2_3:47779695-47779714 | Msa0295270:intron | 20.0% |
| !! | ATATCAAGTATCCATTTAAA+AGG | - | chr2_3:47780180-47780199 | Msa0295270:CDS | 20.0% |
| !!! | AAGAAAACAATCCTTTTAAA+TGG | + | chr2_3:47780194-47780213 | None:intergenic | 20.0% |
| !!! | GTTTATTTTCTTGTTTATCA+GGG | - | chr2_3:47780597-47780616 | Msa0295270:intron | 20.0% |
| !!! | TTCTTTGTTTAAGTAATGAA+AGG | + | chr2_3:47780732-47780751 | None:intergenic | 20.0% |
| !! | CAAATTGTGTTTAAATACTA+TGG | + | chr2_3:47781681-47781700 | None:intergenic | 20.0% |
| !! | TAACTTTATTATAACACATG+TGG | - | chr2_3:47782501-47782520 | Msa0295270:intron | 20.0% |
| !! | TTCAATTGTTATATATAGAG+GGG | - | chr2_3:47783115-47783134 | Msa0295270:CDS | 20.0% |
| !! | GGACTATGTAAAATTTAATA+TGG | + | chr2_3:47783339-47783358 | None:intergenic | 20.0% |
| !!! | TATAAATGTTGCTTTTATTG+TGG | - | chr2_3:47783411-47783430 | Msa0295270:CDS | 20.0% |
| !! | CATTGTAACAAAAAATATCA+AGG | + | chr2_3:47783449-47783468 | None:intergenic | 20.0% |
| !! | TACATAGATATATATAGTAG+GGG | + | chr2_3:47783487-47783506 | None:intergenic | 20.0% |
| !! | CATACATAGATATATATAGT+AGG | + | chr2_3:47783489-47783508 | None:intergenic | 20.0% |
| !! | CTACTATATATATCTATGTA+TGG | - | chr2_3:47783487-47783506 | Msa0295270:CDS | 20.0% |
| !! | TTAAACATTGTTTCAGATAT+GGG | - | chr2_3:47784034-47784053 | Msa0295270:five_prime_UTR | 20.0% |
| !!! | TTATTAACTTTGATGATGTG+TGG | - | chr2_3:47778313-47778332 | Msa0295270:CDS | 25.0% |
| !!! | AAATGAGTTTTGTGTTAACA+AGG | - | chr2_3:47778678-47778697 | Msa0295270:intron | 25.0% |
| !!! | CTACATGCAAATATTTTAAG+TGG | - | chr2_3:47778772-47778791 | Msa0295270:intron | 25.0% |
| ! | CTGATTCAATAAACGATATA+TGG | + | chr2_3:47779193-47779212 | None:intergenic | 25.0% |
| !!! | ATTAGAAGTATCTGTTTCAT+CGG | + | chr2_3:47779512-47779531 | None:intergenic | 25.0% |
| ! | TTATGTTATGTACCTCAAAA+AGG | + | chr2_3:47779619-47779638 | None:intergenic | 25.0% |
| ! | TATATTTCATTTCGATACTC+TGG | - | chr2_3:47779661-47779680 | Msa0295270:intron | 25.0% |
| ! | AAACATTCAAAGACTTTGTT+TGG | + | chr2_3:47779917-47779936 | None:intergenic | 25.0% |
| !!! | CGTTTATTTTCTTGTTTATC+AGG | - | chr2_3:47780596-47780615 | Msa0295270:intron | 25.0% |
| !!! | TTTAAATCTAGTTTGCTTCT+TGG | + | chr2_3:47780821-47780840 | None:intergenic | 25.0% |
| ! | TTTCAGTAAGCTTAAAGTTA+AGG | - | chr2_3:47781272-47781291 | Msa0295270:CDS | 25.0% |
| ! | ATGTGATACAATCATAAAAG+AGG | - | chr2_3:47781413-47781432 | Msa0295270:CDS | 25.0% |
| !! | ATTGCTTCAAGTAATTTTGA+AGG | - | chr2_3:47781522-47781541 | Msa0295270:CDS | 25.0% |
| !! | AAATGCCATTGACAAATTTT+TGG | - | chr2_3:47781562-47781581 | Msa0295270:CDS | 25.0% |
| ! | AGAAACCAAAAATTTGTCAA+TGG | + | chr2_3:47781570-47781589 | None:intergenic | 25.0% |
| ! | ATAACTATAATGCATGTAGT+TGG | - | chr2_3:47781590-47781609 | Msa0295270:CDS | 25.0% |
| ! | TTGTTATCTTATTCAGCTAT+GGG | - | chr2_3:47781874-47781893 | Msa0295270:intron | 25.0% |
| ! | GTAGATCATAGTAATATATC+CGG | + | chr2_3:47782271-47782290 | None:intergenic | 25.0% |
| ! | TTTAGTTGGACATAATAAGA+CGG | - | chr2_3:47782316-47782335 | Msa0295270:CDS | 25.0% |
| ! | CCAACATAAAATAACTTTAC+TGG | + | chr2_3:47782733-47782752 | None:intergenic | 25.0% |
| !!! | CCAGTAAAGTTATTTTATGT+TGG | - | chr2_3:47782730-47782749 | Msa0295270:intron | 25.0% |
| !!! | GTTTGCTACAGATATATTTT+CGG | + | chr2_3:47782760-47782779 | None:intergenic | 25.0% |
| ! | GAAAATATATCTGTAGCAAA+CGG | - | chr2_3:47782759-47782778 | Msa0295270:intron | 25.0% |
| !!! | TGTACCAATTATTTCTATAG+TGG | + | chr2_3:47783765-47783784 | None:intergenic | 25.0% |
| ! | ATCAAAATAATCACCAACTA+TGG | - | chr2_3:47783823-47783842 | Msa0295270:intron | 25.0% |
| ! | AAATTAGTAAAGGGAAAAGT+TGG | + | chr2_3:47784011-47784030 | None:intergenic | 25.0% |
| ! | CTTAAACATTGTTTCAGATA+TGG | - | chr2_3:47784033-47784052 | Msa0295270:five_prime_UTR | 25.0% |
| GTGGCAAATTCTTATCAATT+TGG | - | chr2_3:47778338-47778357 | Msa0295270:CDS | 30.0% | |
| TGCATGAGTGTAAAACAATT+TGG | - | chr2_3:47778713-47778732 | Msa0295270:intron | 30.0% | |
| ! | TGGAAGAGTTTTCTATTTGT+TGG | - | chr2_3:47778733-47778752 | Msa0295270:intron | 30.0% |
| !! | TTTTAAGTGGATAAAGATGG+AGG | - | chr2_3:47778785-47778804 | Msa0295270:intron | 30.0% |
| ACAAGATTCTAGGTTTAGAA+AGG | - | chr2_3:47778893-47778912 | Msa0295270:CDS | 30.0% | |
| ATTCTAGGTTTAGAAAGGAA+AGG | - | chr2_3:47778898-47778917 | Msa0295270:CDS | 30.0% | |
| TTCTAGGTTTAGAAAGGAAA+GGG | - | chr2_3:47778899-47778918 | Msa0295270:CDS | 30.0% | |
| ! | TTTCTTTTGTTCCGTTGAAT+GGG | - | chr2_3:47779001-47779020 | Msa0295270:intron | 30.0% |
| TATTGAATCAGCTTCTTGTT+CGG | - | chr2_3:47779202-47779221 | Msa0295270:intron | 30.0% | |
| TAAAATGAAAGATAGGAGGA+AGG | - | chr2_3:47779454-47779473 | Msa0295270:CDS | 30.0% | |
| GATGAAACAGATACTTCTAA+TGG | - | chr2_3:47779511-47779530 | Msa0295270:CDS | 30.0% | |
| ! | TACGTACTTCTGAGAATATT+TGG | - | chr2_3:47779720-47779739 | Msa0295270:intron | 30.0% |
| ! | ACGTACTTCTGAGAATATTT+GGG | - | chr2_3:47779721-47779740 | Msa0295270:intron | 30.0% |
| ! | GTTTTCAGCTTATTCTCATA+AGG | - | chr2_3:47779782-47779801 | Msa0295270:intron | 30.0% |
| TAGGCTACATTGAAACAAAA+TGG | + | chr2_3:47779948-47779967 | None:intergenic | 30.0% | |
| AAATGTTGGATAACGAAGTT+AGG | + | chr2_3:47779967-47779986 | None:intergenic | 30.0% | |
| CACACAAATAGTTTAATCTC+AGG | + | chr2_3:47780284-47780303 | None:intergenic | 30.0% | |
| CTGAGATTAAACTATTTGTG+TGG | - | chr2_3:47780282-47780301 | Msa0295270:intron | 30.0% | |
| ATATGAGCTTAATGAACAAC+TGG | + | chr2_3:47780437-47780456 | None:intergenic | 30.0% | |
| GAAAGCAAAAACAAAGAACT+AGG | + | chr2_3:47780468-47780487 | None:intergenic | 30.0% | |
| TAGACAAAAGATAGAAGATG+AGG | - | chr2_3:47780690-47780709 | Msa0295270:intron | 30.0% | |
| ACTAGATTTAAAGAGATTGC+TGG | - | chr2_3:47780829-47780848 | Msa0295270:intron | 30.0% | |
| AAGAAGTTGCATCAATAACT+TGG | - | chr2_3:47781173-47781192 | Msa0295270:CDS | 30.0% | |
| ! | TTGGATAAATCCTTTTCTTG+AGG | - | chr2_3:47781230-47781249 | Msa0295270:CDS | 30.0% |
| ! | TGGATAAATCCTTTTCTTGA+GGG | - | chr2_3:47781231-47781250 | Msa0295270:CDS | 30.0% |
| !!! | TAATTTTGAAGGTGTTGTAC+AGG | - | chr2_3:47781533-47781552 | Msa0295270:CDS | 30.0% |
| TGGCTATGAATCATAGTTTA+CGG | - | chr2_3:47781610-47781629 | Msa0295270:CDS | 30.0% | |
| !! | GTACTTGTTTTCTTTTGAAC+CGG | - | chr2_3:47781824-47781843 | Msa0295270:intron | 30.0% |
| !! | TACTTGTTTTCTTTTGAACC+GGG | - | chr2_3:47781825-47781844 | Msa0295270:intron | 30.0% |
| ! | CTTGTTATCTTATTCAGCTA+TGG | - | chr2_3:47781873-47781892 | Msa0295270:intron | 30.0% |
| ! | CCAAATACTATCTGAAATGA+GGG | - | chr2_3:47781910-47781929 | Msa0295270:intron | 30.0% |
| !! | CAAAATTCCATTTTTGCACT+TGG | - | chr2_3:47782038-47782057 | Msa0295270:intron | 30.0% |
| !! | TCTTTTGTTTCAGAACTTTG+TGG | - | chr2_3:47782601-47782620 | Msa0295270:intron | 30.0% |
| !! | CTTTTGTTTCAGAACTTTGT+GGG | - | chr2_3:47782602-47782621 | Msa0295270:intron | 30.0% |
| AAAACACAAGTTTATACCGA+AGG | + | chr2_3:47782692-47782711 | None:intergenic | 30.0% | |
| ACTGGTACTTCAAAATAGAA+AGG | + | chr2_3:47782715-47782734 | None:intergenic | 30.0% | |
| AAATATCGTCTATGTGCATT+AGG | - | chr2_3:47782840-47782859 | Msa0295270:CDS | 30.0% | |
| TGAAACTTGAATTGTAATGC+TGG | + | chr2_3:47782895-47782914 | None:intergenic | 30.0% | |
| TTATAGATTGGTGTGTATAG+AGG | + | chr2_3:47783059-47783078 | None:intergenic | 30.0% | |
| !! | CTCTTTTACATTTTTCGATG+TGG | + | chr2_3:47783277-47783296 | None:intergenic | 30.0% |
| CACATCGAAAAATGTAAAAG+AGG | - | chr2_3:47783275-47783294 | Msa0295270:CDS | 30.0% | |
| ACATGAACAACAAAATTACC+TGG | - | chr2_3:47783608-47783627 | Msa0295270:exon | 30.0% | |
| ! | CTTTTTACTGCAATTACTGT+TGG | + | chr2_3:47783645-47783664 | None:intergenic | 30.0% |
| AAGAGTGAAAGCTATAAACA+AGG | - | chr2_3:47783662-47783681 | Msa0295270:five_prime_UTR | 30.0% | |
| ! | GTTTTCCACATTAAAATTCG+AGG | + | chr2_3:47783691-47783710 | None:intergenic | 30.0% |
| ACGTCCACTATAGAAATAAT+TGG | - | chr2_3:47783758-47783777 | Msa0295270:five_prime_UTR | 30.0% | |
| !! | TTAACTTTGATGATGTGTGG+TGG | - | chr2_3:47778316-47778335 | Msa0295270:CDS | 35.0% |
| GGATAAACTTTAGTCCTTTG+TGG | - | chr2_3:47778359-47778378 | Msa0295270:intron | 35.0% | |
| TAAACTTTAGTCCTTTGTGG+AGG | - | chr2_3:47778362-47778381 | Msa0295270:intron | 35.0% | |
| AAAACACATAACCTCCACAA+AGG | + | chr2_3:47778376-47778395 | None:intergenic | 35.0% | |
| !! | TTCAGGTTGTTAACTTTGAC+TGG | - | chr2_3:47778577-47778596 | Msa0295270:CDS | 35.0% |
| GAATTGTGATCAAGAGAGAT+TGG | - | chr2_3:47778614-47778633 | Msa0295270:intron | 35.0% | |
| TTGTGTTAACAAGGTGATGA+TGG | - | chr2_3:47778687-47778706 | Msa0295270:intron | 35.0% | |
| !! | AACCACCTAGGTTTTTGTTT+TGG | + | chr2_3:47778950-47778969 | None:intergenic | 35.0% |
| CATTCAACGGAACAAAAGAA+AGG | + | chr2_3:47779002-47779021 | None:intergenic | 35.0% | |
| ! | CTTTCTTTTGTTCCGTTGAA+TGG | - | chr2_3:47779000-47779019 | Msa0295270:intron | 35.0% |
| ! | TTCTTTTGTTCCGTTGAATG+GGG | - | chr2_3:47779002-47779021 | Msa0295270:intron | 35.0% |
| ACTAATATCACCCCATTCAA+CGG | + | chr2_3:47779015-47779034 | None:intergenic | 35.0% | |
| ! | AATGGGGTGATATTAGTTTG+AGG | - | chr2_3:47779018-47779037 | Msa0295270:intron | 35.0% |
| ! | GTGATATTAGTTTGAGGCAA+TGG | - | chr2_3:47779024-47779043 | Msa0295270:intron | 35.0% |
| ! | GTGTTGTTGTTCATAATGTG+AGG | - | chr2_3:47779138-47779157 | Msa0295270:intron | 35.0% |
| ATTATGCATCAGCAGAGTTT+CGG | - | chr2_3:47779314-47779333 | Msa0295270:intron | 35.0% | |
| TACTTCTAATGGAGATGAGT+TGG | - | chr2_3:47779522-47779541 | Msa0295270:CDS | 35.0% | |
| AGAATATTTGGGAGAGCTTA+TGG | - | chr2_3:47779732-47779751 | Msa0295270:intron | 35.0% | |
| CTTATTCTCATAAGGTCTTC+AGG | - | chr2_3:47779790-47779809 | Msa0295270:intron | 35.0% | |
| CAGAATAGCTGTTCAAATGT+TGG | + | chr2_3:47779981-47780000 | None:intergenic | 35.0% | |
| AAGCAAAATGAAGCTTCCTT+AGG | + | chr2_3:47780089-47780108 | None:intergenic | 35.0% | |
| ! | AGGAAGCTTCATTTTGCTTA+TGG | - | chr2_3:47780090-47780109 | Msa0295270:CDS | 35.0% |
| ACGATAAATTACCCTAGTGT+TGG | + | chr2_3:47780143-47780162 | None:intergenic | 35.0% | |
| !! | TTGAAGTACTGACAAAGACA+CGG | + | chr2_3:47780402-47780421 | None:intergenic | 35.0% |
| TGTCTTTGTCAGTACTTCAA+AGG | - | chr2_3:47780402-47780421 | Msa0295270:CDS | 35.0% | |
| TGGAAATAGTCTAATCAGTC+AGG | + | chr2_3:47780542-47780561 | None:intergenic | 35.0% | |
| !! | ACATATGCAGTATTGATGAC+GGG | + | chr2_3:47780567-47780586 | None:intergenic | 35.0% |
| !! | CACATATGCAGTATTGATGA+CGG | + | chr2_3:47780568-47780587 | None:intergenic | 35.0% |
| TATCATCTCTTTGTTCGTTG+AGG | + | chr2_3:47780642-47780661 | None:intergenic | 35.0% | |
| CAACGAACAAAGAGATGATA+TGG | - | chr2_3:47780642-47780661 | Msa0295270:intron | 35.0% | |
| !! | ATGGAAAAGTTGATGCTGAA+CGG | + | chr2_3:47780876-47780895 | None:intergenic | 35.0% |
| GAGAGTGATCAGAAAAATCA+TGG | - | chr2_3:47780991-47781010 | Msa0295270:CDS | 35.0% | |
| TTGCAAAAAACTCTCCATCA+CGG | + | chr2_3:47781359-47781378 | None:intergenic | 35.0% | |
| ATCATAGTTTACGGATACGT+TGG | - | chr2_3:47781619-47781638 | Msa0295270:CDS | 35.0% | |
| GAACACATGGTATTTGATCA+CGG | + | chr2_3:47781788-47781807 | None:intergenic | 35.0% | |
| !! | ACTTGTTTTCTTTTGAACCG+GGG | - | chr2_3:47781826-47781845 | Msa0295270:intron | 35.0% |
| ! | GCCAAATACTATCTGAAATG+AGG | - | chr2_3:47781909-47781928 | Msa0295270:intron | 35.0% |
| CCCTCATTTCAGATAGTATT+TGG | + | chr2_3:47781913-47781932 | None:intergenic | 35.0% | |
| ATCAGAAGATCCAACAATGT+TGG | - | chr2_3:47781967-47781986 | Msa0295270:intron | 35.0% | |
| ! | TAAGCTATGGAGTATCAATC+AGG | - | chr2_3:47782015-47782034 | Msa0295270:intron | 35.0% |
| !! | AATTCCATTTTTGCACTTGG+TGG | - | chr2_3:47782041-47782060 | Msa0295270:intron | 35.0% |
| TTATTGCAGGGAGTTAGTAT+CGG | - | chr2_3:47782161-47782180 | Msa0295270:intron | 35.0% | |
| ! | TACATTTGCCTTCGTTTTGA+TGG | + | chr2_3:47782189-47782208 | None:intergenic | 35.0% |
| TAGATACCTTGCATTTGGTT+CGG | - | chr2_3:47782238-47782257 | Msa0295270:intron | 35.0% | |
| TCTGATGGTTATATTGCTAC+TGG | - | chr2_3:47782635-47782654 | Msa0295270:intron | 35.0% | |
| TGAATTGTAATGCTGGCATA+GGG | + | chr2_3:47782888-47782907 | None:intergenic | 35.0% | |
| TTGAATTGTAATGCTGGCAT+AGG | + | chr2_3:47782889-47782908 | None:intergenic | 35.0% | |
| TATAGTTCGATGTGAATGAG+AGG | - | chr2_3:47783087-47783106 | Msa0295270:CDS | 35.0% | |
| CAGCTTGCAAGTAATAATGA+AGG | + | chr2_3:47783151-47783170 | None:intergenic | 35.0% | |
| ! | TGTTAGATTATAGCGGAAAC+AGG | - | chr2_3:47783198-47783217 | Msa0295270:CDS | 35.0% |
| AAATGAGTAGCTTCCATGTA+GGG | + | chr2_3:47783365-47783384 | None:intergenic | 35.0% | |
| AAAATGAGTAGCTTCCATGT+AGG | + | chr2_3:47783366-47783385 | None:intergenic | 35.0% | |
| ! | TAATCACCAACTATGGACTA+TGG | - | chr2_3:47783830-47783849 | Msa0295270:intron | 35.0% |
| !! | GGAATACCTAATTGTTTCTG+AGG | + | chr2_3:47783881-47783900 | None:intergenic | 35.0% |
| GTCTTCTCTTTACATCAGAT+TGG | + | chr2_3:47783902-47783921 | None:intergenic | 35.0% | |
| TTAGTAAAGGGAAAAGTTGG+TGG | + | chr2_3:47784008-47784027 | None:intergenic | 35.0% | |
| ! | ACAATTGAAGGTGTAATGAC+AGG | + | chr2_3:47784091-47784110 | None:intergenic | 35.0% |
| TGTCATTACACCTTCAATTG+TGG | - | chr2_3:47784090-47784109 | Msa0295270:five_prime_UTR | 35.0% | |
| ATTAATTGCACCTCCAATTG+CGG | - | chr2_3:47784139-47784158 | Msa0295270:five_prime_UTR | 35.0% | |
| ! | AGGAGAATTCTGAGAGTTCT+AGG | - | chr2_3:47778805-47778824 | Msa0295270:intron | 40.0% |
| ! | GGAGAATTCTGAGAGTTCTA+GGG | - | chr2_3:47778806-47778825 | Msa0295270:intron | 40.0% |
| !! | TCTAGGGCTTTGAATAGTTC+TGG | - | chr2_3:47778822-47778841 | Msa0295270:intron | 40.0% |
| !! | ATAGTTCTGGAGTCTCAGAT+AGG | - | chr2_3:47778835-47778854 | Msa0295270:intron | 40.0% |
| AGTCTCAGATAGGAACCAAA+GGG | - | chr2_3:47778845-47778864 | Msa0295270:intron | 40.0% | |
| CAAAGGGAAAATCCTTTCTC+CGG | - | chr2_3:47778861-47778880 | Msa0295270:CDS | 40.0% | |
| GGTTTAGAAAGGAAAGGGAT+TGG | - | chr2_3:47778904-47778923 | Msa0295270:CDS | 40.0% | |
| AAGGAAAGGGATTGGATTCA+TGG | - | chr2_3:47778912-47778931 | Msa0295270:CDS | 40.0% | |
| GGTGACCAAAACAAAAACCT+AGG | - | chr2_3:47778942-47778961 | Msa0295270:intron | 40.0% | |
| GACCAAAACAAAAACCTAGG+TGG | - | chr2_3:47778945-47778964 | Msa0295270:intron | 40.0% | |
| ! | AAACCTAGGTGGTTTTTGTG+AGG | - | chr2_3:47778956-47778975 | Msa0295270:intron | 40.0% |
| ! | AACCTAGGTGGTTTTTGTGA+GGG | - | chr2_3:47778957-47778976 | Msa0295270:intron | 40.0% |
| ! | TATTAGTTTGAGGCAATGGC+TGG | - | chr2_3:47779028-47779047 | Msa0295270:intron | 40.0% |
| GATACCAGCTCAGATTCTTT+AGG | - | chr2_3:47779224-47779243 | Msa0295270:intron | 40.0% | |
| ATCTCCTAAAGAATCTGAGC+TGG | + | chr2_3:47779231-47779250 | None:intergenic | 40.0% | |
| ! | AGCTCAGATTCTTTAGGAGA+TGG | - | chr2_3:47779230-47779249 | Msa0295270:intron | 40.0% |
| ! | TTTTAACCTCAACACCTCCT+TGG | + | chr2_3:47779268-47779287 | None:intergenic | 40.0% |
| TGCTGATGCATAATATCACG+AGG | + | chr2_3:47779308-47779327 | None:intergenic | 40.0% | |
| ! | ACATCTGAAGCACATGAACT+AGG | + | chr2_3:47779578-47779597 | None:intergenic | 40.0% |
| TGCTTCAGATGTTTACCGAT+TGG | - | chr2_3:47779586-47779605 | Msa0295270:intron | 40.0% | |
| ! | GCTTCAGATGTTTACCGATT+GGG | - | chr2_3:47779587-47779606 | Msa0295270:intron | 40.0% |
| ! | CTTCAGATGTTTACCGATTG+GGG | - | chr2_3:47779588-47779607 | Msa0295270:intron | 40.0% |
| CAAAAAGGAGAATCCCCAAT+CGG | + | chr2_3:47779604-47779623 | None:intergenic | 40.0% | |
| ! | ATTGGGGATTCTCCTTTTTG+AGG | - | chr2_3:47779604-47779623 | Msa0295270:intron | 40.0% |
| ! | CACTTTAGAAGTAACTGTGG+AGG | + | chr2_3:47780065-47780084 | None:intergenic | 40.0% |
| ! | CTCCACAGTTACTTCTAAAG+TGG | - | chr2_3:47780063-47780082 | Msa0295270:CDS | 40.0% |
| !! | GTTACTTCTAAAGTGGCCTA+AGG | - | chr2_3:47780070-47780089 | Msa0295270:CDS | 40.0% |
| TCAATGCGAAACAGCTTGTA+AGG | + | chr2_3:47780258-47780277 | None:intergenic | 40.0% | |
| !! | GTCAGTACTTCAAAGGTGTT+TGG | - | chr2_3:47780409-47780428 | Msa0295270:CDS | 40.0% |
| CTATCAATGACTGTCATGGA+TGG | + | chr2_3:47780895-47780914 | None:intergenic | 40.0% | |
| TAGGAACTAGAAAACGAGTC+AGG | - | chr2_3:47780932-47780951 | Msa0295270:CDS | 40.0% | |
| ! | CGATGAATGTGATGATAACG+TGG | - | chr2_3:47780969-47780988 | Msa0295270:CDS | 40.0% |
| ATATGCGAATGTCTAACTCC+CGG | + | chr2_3:47781117-47781136 | None:intergenic | 40.0% | |
| AGACATTCGCATATGGCAAA+TGG | - | chr2_3:47781123-47781142 | Msa0295270:CDS | 40.0% | |
| ATTCGCATATGGCAAATGGT+GGG | - | chr2_3:47781127-47781146 | Msa0295270:CDS | 40.0% | |
| TTGCACAAACCCTCAAGAAA+AGG | + | chr2_3:47781243-47781262 | None:intergenic | 40.0% | |
| ! | GATTTTCTTGTTCACACCAG+CGG | + | chr2_3:47781382-47781401 | None:intergenic | 40.0% |
| CAAAGCTGAGCAGTTTATGT+TGG | - | chr2_3:47781478-47781497 | Msa0295270:CDS | 40.0% | |
| CTGAAAGCTTAGGGTTTACA+TGG | + | chr2_3:47781706-47781725 | None:intergenic | 40.0% | |
| AAACCCTAAGCTTTCAGTGA+TGG | - | chr2_3:47781709-47781728 | Msa0295270:CDS | 40.0% | |
| CTACCATCACTGAAAGCTTA+GGG | + | chr2_3:47781715-47781734 | None:intergenic | 40.0% | |
| TCTACCATCACTGAAAGCTT+AGG | + | chr2_3:47781716-47781735 | None:intergenic | 40.0% | |
| AGCTTTCAGTGATGGTAGAA+TGG | - | chr2_3:47781717-47781736 | Msa0295270:CDS | 40.0% | |
| !! | TTCTGAGATGTAGCCACAAT+TGG | - | chr2_3:47781755-47781774 | Msa0295270:CDS | 40.0% |
| ! | TCTGAGATGTAGCCACAATT+GGG | - | chr2_3:47781756-47781775 | Msa0295270:CDS | 40.0% |
| AAACGCAAACAGAGAACACA+TGG | + | chr2_3:47781801-47781820 | None:intergenic | 40.0% | |
| ACATCCACCAAGTGCAAAAA+TGG | + | chr2_3:47782048-47782067 | None:intergenic | 40.0% | |
| !! | ATGAGTTGTTTCTCTCACCT+GGG | - | chr2_3:47782135-47782154 | Msa0295270:intron | 40.0% |
| TATCGGTACCATCAAAACGA+AGG | - | chr2_3:47782178-47782197 | Msa0295270:intron | 40.0% | |
| ! | ACCAAATGCAAGGTATCTAG+CGG | + | chr2_3:47782237-47782256 | None:intergenic | 40.0% |
| TGTCCAACTAAAGTGCAAAG+CGG | + | chr2_3:47782308-47782327 | None:intergenic | 40.0% | |
| !! | GGACAACACTTTGAAGCTTT+GGG | - | chr2_3:47782388-47782407 | Msa0295270:CDS | 40.0% |
| TGACCAGTGAACGATTGAAT+CGG | + | chr2_3:47782449-47782468 | None:intergenic | 40.0% | |
| CACTGGTCACACAAATGTTA+AGG | - | chr2_3:47782460-47782479 | Msa0295270:intron | 40.0% | |
| GTGGGATTATCAGTATCTGA+TGG | - | chr2_3:47782620-47782639 | Msa0295270:intron | 40.0% | |
| !! | TACTGGTTCAGAGACAAATG+AGG | - | chr2_3:47782652-47782671 | Msa0295270:intron | 40.0% |
| GGTATATTTCACACGTCCTT+CGG | - | chr2_3:47782673-47782692 | Msa0295270:intron | 40.0% | |
| TTAGGTGTTCGTATACCACA+AGG | - | chr2_3:47782858-47782877 | Msa0295270:CDS | 40.0% | |
| CAGAACACAGATCCAATTTC+TGG | - | chr2_3:47782913-47782932 | Msa0295270:CDS | 40.0% | |
| !! | TCCAATTTCTGGTAACGAAG+TGG | - | chr2_3:47782924-47782943 | Msa0295270:CDS | 40.0% |
| TCCACTTCGTTACCAGAAAT+TGG | + | chr2_3:47782928-47782947 | None:intergenic | 40.0% | |
| ! | GAATGTCAAGATTCTGGAGA+TGG | - | chr2_3:47783023-47783042 | Msa0295270:CDS | 40.0% |
| ! | ATAGCGGAAACAGGTAAAAG+AGG | - | chr2_3:47783207-47783226 | Msa0295270:CDS | 40.0% |
| TACATAGTCCTTTCCCTACA+TGG | - | chr2_3:47783349-47783368 | Msa0295270:CDS | 40.0% | |
| ! | CTGCTGAAGAGATTTTCTGA+TGG | - | chr2_3:47783521-47783540 | Msa0295270:CDS | 40.0% |
| ! | GAAGAGATTTTCTGATGGAG+AGG | - | chr2_3:47783526-47783545 | Msa0295270:CDS | 40.0% |
| ACAACACTGGTGATAAGGAA+TGG | - | chr2_3:47783578-47783597 | Msa0295270:CDS | 40.0% | |
| ACTGCAATTACTGTTGGTGT+TGG | + | chr2_3:47783639-47783658 | None:intergenic | 40.0% | |
| !! | GGACACCTCGAATTTTAATG+TGG | - | chr2_3:47783683-47783702 | Msa0295270:five_prime_UTR | 40.0% |
| !!! | CTATAGTGGACGTTTTTGAC+TGG | + | chr2_3:47783751-47783770 | None:intergenic | 40.0% |
| TAGTGGTAGTAGGAAGACAA+TGG | + | chr2_3:47783789-47783808 | None:intergenic | 40.0% | |
| ATTGTCTTCCTACTACCACT+AGG | - | chr2_3:47783788-47783807 | Msa0295270:five_prime_UTR | 40.0% | |
| TGTCAATTCCTAGTGGTAGT+AGG | + | chr2_3:47783799-47783818 | None:intergenic | 40.0% | |
| GATTCTCTGTCAATTCCTAG+TGG | + | chr2_3:47783806-47783825 | None:intergenic | 40.0% | |
| GATTCACCATAGTCCATAGT+TGG | + | chr2_3:47783839-47783858 | None:intergenic | 40.0% | |
| AGCAGACCTCAGAAACAATT+AGG | - | chr2_3:47783872-47783891 | Msa0295270:intron | 40.0% | |
| ! | TCGGCAAACGTTCTTTGTTT+CGG | + | chr2_3:47783977-47783996 | None:intergenic | 40.0% |
| !! | AAAGTTGGTGGAAGTGTGTT+CGG | + | chr2_3:47783996-47784015 | None:intergenic | 40.0% |
| AAATCAGCTGGAGGATTAGA+AGG | + | chr2_3:47784064-47784083 | None:intergenic | 40.0% | |
| ATGACAGGTTTCAAATCAGC+TGG | + | chr2_3:47784076-47784095 | None:intergenic | 40.0% | |
| TCTGACTTCATATCAGCAGA+AGG | + | chr2_3:47784118-47784137 | None:intergenic | 40.0% | |
| TCTCTCTCTCTCTCTCTCTA+TGG | - | chr2_3:47778250-47778269 | Msa0295270:CDS | 45.0% | |
| !! | ACTTTGATGATGTGTGGTGG+TGG | - | chr2_3:47778319-47778338 | Msa0295270:CDS | 45.0% |
| GAGTCTCAGATAGGAACCAA+AGG | - | chr2_3:47778844-47778863 | Msa0295270:intron | 45.0% | |
| ! | CGGAGAAAGGATTTTCCCTT+TGG | + | chr2_3:47778863-47778882 | None:intergenic | 45.0% |
| GATTGGATTCATGGTGCACA+AGG | - | chr2_3:47778921-47778940 | Msa0295270:intron | 45.0% | |
| AAGAAATCCACCGATCGATC+CGG | + | chr2_3:47779059-47779078 | None:intergenic | 45.0% | |
| GTTAATGCAGCACACTGTCA+AGG | - | chr2_3:47779116-47779135 | Msa0295270:intron | 45.0% | |
| GAAAGACGACATGACAAAGC+AGG | + | chr2_3:47779168-47779187 | None:intergenic | 45.0% | |
| GATGGAGTAAACAACGACCA+AGG | - | chr2_3:47779248-47779267 | Msa0295270:intron | 45.0% | |
| TATGCCTGCCAAGATTTCGA+CGG | - | chr2_3:47779349-47779368 | Msa0295270:intron | 45.0% | |
| TAGGAGGAAGGATGAAGAAG+TGG | - | chr2_3:47779466-47779485 | Msa0295270:CDS | 45.0% | |
| AGGAAGGATGAAGAAGTGGA+AGG | - | chr2_3:47779470-47779489 | Msa0295270:CDS | 45.0% | |
| TTGGTACACTAGTCCTGAAG+AGG | - | chr2_3:47779541-47779560 | Msa0295270:intron | 45.0% | |
| !! | TTCGATACTCTGGCTCTGTT+TGG | - | chr2_3:47779671-47779690 | Msa0295270:intron | 45.0% |
| TTCTCTTCTCTTGAGCTCAG+TGG | + | chr2_3:47780005-47780024 | None:intergenic | 45.0% | |
| ! | GGCCACTTTAGAAGTAACTG+TGG | + | chr2_3:47780068-47780087 | None:intergenic | 45.0% |
| !! | TGCAGTATTGATGACGGGAT+TGG | + | chr2_3:47780562-47780581 | None:intergenic | 45.0% |
| ! | AGATTGCTGGCGTTGAACTA+GGG | - | chr2_3:47780842-47780861 | Msa0295270:intron | 45.0% |
| CTCGCTATCAATGACTGTCA+TGG | + | chr2_3:47780899-47780918 | None:intergenic | 45.0% | |
| !! | CATGACAGTCATTGATAGCG+AGG | - | chr2_3:47780897-47780916 | Msa0295270:CDS | 45.0% |
| AGCGAGGATTCTGCTTGTTT+AGG | - | chr2_3:47780913-47780932 | Msa0295270:CDS | 45.0% | |
| ACTAGAAAACGAGTCAGGCT+AGG | - | chr2_3:47780937-47780956 | Msa0295270:CDS | 45.0% | |
| CTAGAAAACGAGTCAGGCTA+GGG | - | chr2_3:47780938-47780957 | Msa0295270:CDS | 45.0% | |
| TGCAAACCATCCTATTCCTC+AGG | - | chr2_3:47781087-47781106 | Msa0295270:CDS | 45.0% | |
| ATCCTATTCCTCAGGAAGAC+CGG | - | chr2_3:47781095-47781114 | Msa0295270:CDS | 45.0% | |
| GGGAGTTAGACATTCGCATA+TGG | - | chr2_3:47781116-47781135 | Msa0295270:CDS | 45.0% | |
| CATTCGCATATGGCAAATGG+TGG | - | chr2_3:47781126-47781145 | Msa0295270:CDS | 45.0% | |
| ! | ATATGGCAAATGGTGGGAGA+GGG | - | chr2_3:47781133-47781152 | Msa0295270:CDS | 45.0% |
| ! | AACTTGGCGTTGAAAGACCA+AGG | - | chr2_3:47781189-47781208 | Msa0295270:CDS | 45.0% |
| GCAAAAGATCTCCTTGCTTC+AGG | + | chr2_3:47781302-47781321 | None:intergenic | 45.0% | |
| ACTGAGTGAGCATACTAGGT+TGG | + | chr2_3:47781331-47781350 | None:intergenic | 45.0% | |
| CGAAACTGAGTGAGCATACT+AGG | + | chr2_3:47781335-47781354 | None:intergenic | 45.0% | |
| !! | CTACCGGATAGTGGATATCA+CGG | + | chr2_3:47781440-47781459 | None:intergenic | 45.0% |
| TGATATCCACTATCCGGTAG+TGG | - | chr2_3:47781440-47781459 | Msa0295270:CDS | 45.0% | |
| TAGTTTACGGATACGTTGGC+AGG | - | chr2_3:47781623-47781642 | Msa0295270:CDS | 45.0% | |
| ! | ATTTGTTAGAACAGCGACCC+CGG | + | chr2_3:47781846-47781865 | None:intergenic | 45.0% |
| ACGACGGTTCAGTTAAGCTA+TGG | - | chr2_3:47782002-47782021 | Msa0295270:intron | 45.0% | |
| !! | GATGAGTTGTTTCTCTCACC+TGG | - | chr2_3:47782134-47782153 | Msa0295270:intron | 45.0% |
| ATGCTGTGTTCAGTTTCCTC+TGG | - | chr2_3:47782208-47782227 | Msa0295270:intron | 45.0% | |
| TCCGCTAGATACCTTGCATT+TGG | - | chr2_3:47782233-47782252 | Msa0295270:intron | 45.0% | |
| !! | AAGCTTCAAAGTGTTGTCCG+TGG | + | chr2_3:47782387-47782406 | None:intergenic | 45.0% |
| !! | CGGACAACACTTTGAAGCTT+TGG | - | chr2_3:47782387-47782406 | Msa0295270:CDS | 45.0% |
| TTGTAATGCTGGCATAGGGA+AGG | + | chr2_3:47782884-47782903 | None:intergenic | 45.0% | |
| ! | AGTTTGTCTCCTCGGTTTGT+TGG | - | chr2_3:47782959-47782978 | Msa0295270:CDS | 45.0% |
| TGTGGAATTTGCGGCGATTA+GGG | + | chr2_3:47783001-47783020 | None:intergenic | 45.0% | |
| TAATCGCCGCAAATTCCACA+GGG | - | chr2_3:47783001-47783020 | Msa0295270:CDS | 45.0% | |
| GACATTCCCTGTGGAATTTG+CGG | + | chr2_3:47783010-47783029 | None:intergenic | 45.0% | |
| CAGAATCTTGACATTCCCTG+TGG | + | chr2_3:47783019-47783038 | None:intergenic | 45.0% | |
| CACAGGGAATGTCAAGATTC+TGG | - | chr2_3:47783017-47783036 | Msa0295270:CDS | 45.0% | |
| AGTAGCTTCCATGTAGGGAA+AGG | + | chr2_3:47783360-47783379 | None:intergenic | 45.0% | |
| AGAGGAGTTTGTGATAGCTG+AGG | - | chr2_3:47783544-47783563 | Msa0295270:CDS | 45.0% | |
| GCTTGACAACACTGGTGATA+AGG | - | chr2_3:47783573-47783592 | Msa0295270:CDS | 45.0% | |
| ACAGGTTTCAAATCAGCTGG+AGG | + | chr2_3:47784073-47784092 | None:intergenic | 45.0% | |
| GCAGAAGGATCCACAATTGA+AGG | + | chr2_3:47784103-47784122 | None:intergenic | 45.0% | |
| !!! | TTTAATTATATTTTTTAGTT+TGG | - | chr2_3:47778443-47778462 | Msa0295270:intron | 5.0% |
| !! | ATTAAATAAAAAACAATAAA+GGG | + | chr2_3:47778518-47778537 | None:intergenic | 5.0% |
| !! | TATTAAATAAAAAACAATAA+AGG | + | chr2_3:47778519-47778538 | None:intergenic | 5.0% |
| !!! | TTTATTGTTTTTTATTTAAT+AGG | - | chr2_3:47778518-47778537 | Msa0295270:intron | 5.0% |
| GAAAATCCTTTCTCCGGCGA+GGG | - | chr2_3:47778867-47778886 | Msa0295270:CDS | 50.0% | |
| AGAATCTTGTGATCCCTCGC+CGG | + | chr2_3:47778883-47778902 | None:intergenic | 50.0% | |
| GCGAGGGATCACAAGATTCT+AGG | - | chr2_3:47778883-47778902 | Msa0295270:CDS | 50.0% | |
| CACCCTCACAAAAACCACCT+AGG | + | chr2_3:47778962-47778981 | None:intergenic | 50.0% | |
| GAGGCAATGGCTGGATAAAC+CGG | - | chr2_3:47779037-47779056 | Msa0295270:intron | 50.0% | |
| GCTGGATAAACCGGATCGAT+CGG | - | chr2_3:47779046-47779065 | Msa0295270:intron | 50.0% | |
| GACGACATGACAAAGCAGGA+AGG | + | chr2_3:47779164-47779183 | None:intergenic | 50.0% | |
| GGAGTAAACAACGACCAAGG+AGG | - | chr2_3:47779251-47779270 | Msa0295270:intron | 50.0% | |
| TCACGAGGACAGTGAGATGT+CGG | + | chr2_3:47779293-47779312 | None:intergenic | 50.0% | |
| CCAAGATTTCGACGGATGCT+CGG | - | chr2_3:47779357-47779376 | Msa0295270:intron | 50.0% | |
| ACTAGTCCTGAAGAGGTTGC+TGG | - | chr2_3:47779548-47779567 | Msa0295270:intron | 50.0% | |
| ! | CTAGTGTTGGACGACTGCTA+GGG | + | chr2_3:47780130-47780149 | None:intergenic | 50.0% |
| CTAGCAGTCGTCCAACACTA+GGG | - | chr2_3:47780129-47780148 | Msa0295270:CDS | 50.0% | |
| ! | GAGATTGCTGGCGTTGAACT+AGG | - | chr2_3:47780841-47780860 | Msa0295270:intron | 50.0% |
| GGTCTTCCTGAGGAATAGGA+TGG | + | chr2_3:47781096-47781115 | None:intergenic | 50.0% | |
| TCCTATTCCTCAGGAAGACC+GGG | - | chr2_3:47781096-47781115 | Msa0295270:CDS | 50.0% | |
| ! | CATATGGCAAATGGTGGGAG+AGG | - | chr2_3:47781132-47781151 | Msa0295270:CDS | 50.0% |
| ! | TGGCGTTGAAAGACCAAGGA+AGG | - | chr2_3:47781193-47781212 | Msa0295270:CDS | 50.0% |
| ! | GGCGTTGAAAGACCAAGGAA+GGG | - | chr2_3:47781194-47781213 | Msa0295270:CDS | 50.0% |
| GTTAAGGCTGACCTGAAGCA+AGG | - | chr2_3:47781288-47781307 | Msa0295270:CDS | 50.0% | |
| TCACTCAGTTTCGACCGTGA+TGG | - | chr2_3:47781342-47781361 | Msa0295270:CDS | 50.0% | |
| !!! | GGAGAGTTTTTTGCAACCGC+TGG | - | chr2_3:47781363-47781382 | Msa0295270:CDS | 50.0% |
| GGACCGTGATATCCACTATC+CGG | - | chr2_3:47781434-47781453 | Msa0295270:CDS | 50.0% | |
| TGGCTACATCTCAGAATGCG+CGG | + | chr2_3:47781751-47781770 | None:intergenic | 50.0% | |
| TCACGGAGTTAGCCCAATTG+TGG | + | chr2_3:47781771-47781790 | None:intergenic | 50.0% | |
| GATCCAACAATGTTGGCGAG+TGG | - | chr2_3:47781974-47781993 | Msa0295270:intron | 50.0% | |
| TCACCTGGGCTGTTATTGCA+GGG | - | chr2_3:47782149-47782168 | Msa0295270:intron | 50.0% | |
| AGGTATCTAGCGGAATCCAG+AGG | + | chr2_3:47782227-47782246 | None:intergenic | 50.0% | |
| GATCTGCCGAACCAAATGCA+AGG | + | chr2_3:47782247-47782266 | None:intergenic | 50.0% | |
| !! | CATTTGGTTCGGCAGATCAC+CGG | - | chr2_3:47782249-47782268 | Msa0295270:intron | 50.0% |
| !! | GTGCCGCTTTGCACTTTAGT+TGG | - | chr2_3:47782302-47782321 | Msa0295270:CDS | 50.0% |
| CAACCTTGTCTCTGCATCCA+CGG | - | chr2_3:47782367-47782386 | Msa0295270:CDS | 50.0% | |
| !! | TCGCCGATTCAATCGTTCAC+TGG | - | chr2_3:47782443-47782462 | Msa0295270:intron | 50.0% |
| TGCCACACAGTTTGTCTCCT+CGG | - | chr2_3:47782951-47782970 | Msa0295270:CDS | 50.0% | |
| AACCGAGGAGACAAACTGTG+TGG | + | chr2_3:47782956-47782975 | None:intergenic | 50.0% | |
| GAATTTGCGGCGATTAGGGT+TGG | + | chr2_3:47782997-47783016 | None:intergenic | 50.0% | |
| CTGTGGAATTTGCGGCGATT+AGG | + | chr2_3:47783002-47783021 | None:intergenic | 50.0% | |
| CTAATCGCCGCAAATTCCAC+AGG | - | chr2_3:47783000-47783019 | Msa0295270:CDS | 50.0% | |
| GGAAAATCCTTTCTCCGGCG+AGG | - | chr2_3:47778866-47778885 | Msa0295270:CDS | 55.0% | |
| GGATAAACCGGATCGATCGG+TGG | - | chr2_3:47779049-47779068 | Msa0295270:intron | 55.0% | |
| !! | CAACGACCAAGGAGGTGTTG+AGG | - | chr2_3:47779259-47779278 | Msa0295270:intron | 55.0% |
| GCATCCGTCGAAATCTTGGC+AGG | + | chr2_3:47779356-47779375 | None:intergenic | 55.0% | |
| CCGAGCATCCGTCGAAATCT+TGG | + | chr2_3:47779360-47779379 | None:intergenic | 55.0% | |
| ! | GCTGTCAAGTGCTGTGTACG+CGG | - | chr2_3:47779397-47779416 | Msa0295270:CDS | 55.0% |
| ! | GGAGTACCAGCAACCTCTTC+AGG | + | chr2_3:47779557-47779576 | None:intergenic | 55.0% |
| ! | CCTAGTGTTGGACGACTGCT+AGG | + | chr2_3:47780131-47780150 | None:intergenic | 55.0% |
| CCTAGCAGTCGTCCAACACT+AGG | - | chr2_3:47780128-47780147 | Msa0295270:CDS | 55.0% | |
| TCCCGGTCTTCCTGAGGAAT+AGG | + | chr2_3:47781100-47781119 | None:intergenic | 55.0% | |
| TCTAACTCCCGGTCTTCCTG+AGG | + | chr2_3:47781106-47781125 | None:intergenic | 55.0% | |
| CCATCTCCACTACCGGATAG+TGG | + | chr2_3:47781449-47781468 | None:intergenic | 55.0% | |
| !! | CCACTATCCGGTAGTGGAGA+TGG | - | chr2_3:47781446-47781465 | Msa0295270:CDS | 55.0% |
| CTGCAAGCCATCTCCACTAC+CGG | + | chr2_3:47781456-47781475 | None:intergenic | 55.0% | |
| ! | CTGAAATGAGGGAGCACGAG+CGG | - | chr2_3:47781921-47781940 | Msa0295270:intron | 55.0% |
| CTGCCACTCGCCAACATTGT+TGG | + | chr2_3:47781980-47781999 | None:intergenic | 55.0% | |
| CTCACCTGGGCTGTTATTGC+AGG | - | chr2_3:47782148-47782167 | Msa0295270:intron | 55.0% | |
| ACTCCCTGCAATAACAGCCC+AGG | + | chr2_3:47782155-47782174 | None:intergenic | 55.0% | |
| TGTCCGTGGATGCAGAGACA+AGG | + | chr2_3:47782373-47782392 | None:intergenic | 55.0% | |
| ! | GGTGCTGTGCTTGACAACAC+TGG | - | chr2_3:47783565-47783584 | Msa0295270:CDS | 55.0% |
| !! | CTGTTGGTGTTGGCTATGCC+AGG | + | chr2_3:47783629-47783648 | None:intergenic | 55.0% |
| TGTGATCCCTCGCCGGAGAA+AGG | + | chr2_3:47778876-47778895 | None:intergenic | 60.0% | |
| GTTGGACGACTGCTAGGGTC+AGG | + | chr2_3:47780125-47780144 | None:intergenic | 60.0% | |
| CACTTGCGCTGTCCCTTCCT+TGG | + | chr2_3:47781209-47781228 | None:intergenic | 60.0% | |
| GAAGGGACAGCGCAAGTGCT+TGG | - | chr2_3:47781211-47781230 | Msa0295270:CDS | 60.0% | |
| !! | CGGTAGTGGAGATGGCTTGC+AGG | - | chr2_3:47781454-47781473 | Msa0295270:CDS | 60.0% |
| ACGTTGGCAGGTCGCTCAAG+TGG | - | chr2_3:47781635-47781654 | Msa0295270:CDS | 60.0% | |
| CGTTGGCAGGTCGCTCAAGT+GGG | - | chr2_3:47781636-47781655 | Msa0295270:CDS | 60.0% | |
| GTTGGCAGGTCGCTCAAGTG+GGG | - | chr2_3:47781637-47781656 | Msa0295270:CDS | 60.0% | |
| TTGGCAGGTCGCTCAAGTGG+GGG | - | chr2_3:47781638-47781657 | Msa0295270:CDS | 60.0% | |
| CTGGCATAGGGAAGGCCTTG+TGG | + | chr2_3:47782876-47782895 | None:intergenic | 60.0% | |
| !! | GTCTCCTCGGTTTGTTGGCG+CGG | - | chr2_3:47782964-47782983 | Msa0295270:CDS | 60.0% |
| TCAGCGGGAGGATCCGCAAT+TGG | + | chr2_3:47784155-47784174 | None:intergenic | 60.0% | |
| TTGGCGAGTGGCAGCGACGA+CGG | - | chr2_3:47781986-47782005 | Msa0295270:intron | 65.0% | |
| CTGACCGCGCCAACAAACCG+AGG | + | chr2_3:47782971-47782990 | None:intergenic | 65.0% | |
| GCGGGAGGATCCGCAATTGG+AGG | + | chr2_3:47784152-47784171 | None:intergenic | 65.0% | |
| ! | GGGAGCACGAGCGGCGAGTG+TGG | - | chr2_3:47781930-47781949 | Msa0295270:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 47778239 | 47784174 | 47778239 | ID=Msa0295270;Name=Msa0295270 |
| chr2_3 | mRNA | 47778239 | 47784174 | 47778239 | ID=Msa0295270-mRNA-1;Parent=Msa0295270;Name=Msa0295270-mRNA-1;_AED=0.15;_eAED=0.15;_QI=364|0.6|0.54|0.72|0.9|0.81|11|0|979 |
| chr2_3 | exon | 47778239 | 47778363 | 47778239 | ID=Msa0295270-mRNA-1:exon:14912;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47778552 | 47778603 | 47778552 | ID=Msa0295270-mRNA-1:exon:14911;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47778848 | 47778931 | 47778848 | ID=Msa0295270-mRNA-1:exon:14910;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47779369 | 47779551 | 47779369 | ID=Msa0295270-mRNA-1:exon:14909;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47779740 | 47779799 | 47779740 | ID=Msa0295270-mRNA-1:exon:14908;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47779932 | 47780243 | 47779932 | ID=Msa0295270-mRNA-1:exon:14907;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47780320 | 47780523 | 47780320 | ID=Msa0295270-mRNA-1:exon:14906;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47780859 | 47781795 | 47780859 | ID=Msa0295270-mRNA-1:exon:14905;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47782263 | 47782420 | 47782263 | ID=Msa0295270-mRNA-1:exon:14904;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47782788 | 47783831 | 47782788 | ID=Msa0295270-mRNA-1:exon:14903;Parent=Msa0295270-mRNA-1 |
| chr2_3 | exon | 47784030 | 47784174 | 47784030 | ID=Msa0295270-mRNA-1:exon:14902;Parent=Msa0295270-mRNA-1 |
| chr2_3 | five_prime_UTR | 47784030 | 47784174 | 47784030 | ID=Msa0295270-mRNA-1:five_prime_utr;Parent=Msa0295270-mRNA-1 |
| chr2_3 | five_prime_UTR | 47783613 | 47783831 | 47783613 | ID=Msa0295270-mRNA-1:five_prime_utr;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47782788 | 47783612 | 47782788 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47782263 | 47782420 | 47782263 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47780859 | 47781795 | 47780859 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47780320 | 47780523 | 47780320 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47779932 | 47780243 | 47779932 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47779740 | 47779799 | 47779740 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47779369 | 47779551 | 47779369 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47778848 | 47778931 | 47778848 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47778552 | 47778603 | 47778552 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| chr2_3 | CDS | 47778239 | 47778363 | 47778239 | ID=Msa0295270-mRNA-1:cds;Parent=Msa0295270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
