AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0216010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216010 MtrunA17_Chr2g0317491 96.188 892 13 3 2 892 3 874 0.0 1759
Msa0216010 MtrunA17_Chr8g0347471 38.588 850 430 18 76 892 196 986 1.41e-179 546
Msa0216010 MtrunA17_Chr5g0396821 39.623 848 390 19 76 892 277 1033 1.74e-177 543
Msa0216010 MtrunA17_Chr5g0438901 36.239 585 291 9 334 892 147 675 4.78e-114 365
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216010 AT3G15354.3 60.957 899 274 14 7 892 9 843 0.0 1066
Msa0216010 AT3G15354.1 59.956 899 275 14 7 892 9 835 0.0 1046
Msa0216010 AT1G53090.3 58.602 901 244 18 6 892 8 793 0.0 970
Msa0216010 AT1G53090.1 58.602 901 244 18 6 892 8 793 0.0 970
Msa0216010 AT1G53090.2 58.602 901 244 18 6 892 8 793 0.0 970
Msa0216010 AT3G15354.4 64.992 617 179 9 289 892 1 593 0.0 811
Msa0216010 AT3G15354.5 64.992 617 179 9 289 892 1 593 0.0 811
Msa0216010 AT3G15354.2 58.190 696 233 13 7 689 9 659 0.0 763
Msa0216010 AT1G53090.4 63.474 616 169 9 289 892 1 572 0.0 757
Msa0216010 AT1G53090.5 55.635 701 201 17 6 692 8 612 0.0 674
Msa0216010 AT2G46340.1 39.427 837 404 17 76 892 275 1028 1.73e-179 548
Msa0216010 AT2G46340.2 39.427 837 404 17 76 892 275 1028 1.73e-179 548
Msa0216010 AT4G11110.1 38.452 827 407 16 76 892 301 1035 1.57e-176 541
Msa0216010 AT2G32950.2 35.602 573 296 10 342 890 35 558 3.74e-110 352
Msa0216010 AT2G32950.1 35.602 573 296 10 342 890 148 671 9.00e-109 352
Msa0216010 AT5G52250.1 35.207 338 182 12 563 890 70 380 2.23e-48 177
Msa0216010 AT5G23730.1 33.898 354 187 15 565 898 41 367 3.31e-46 170
Msa0216010 AT2G43770.1 24.214 318 196 12 567 869 56 343 7.12e-12 68.6
Msa0216010 AT2G32700.7 24.348 230 141 7 563 791 529 726 5.37e-11 67.4
Msa0216010 AT2G32700.6 24.348 230 141 7 563 791 508 705 5.76e-11 67.0
Msa0216010 AT2G32700.2 24.348 230 141 7 563 791 510 707 6.02e-11 67.0
Msa0216010 AT2G32700.5 24.348 230 141 7 563 791 510 707 6.02e-11 67.0
Msa0216010 AT2G32700.1 24.348 230 141 7 563 791 510 707 6.02e-11 67.0
Msa0216010 AT2G32700.4 24.348 230 141 7 563 791 510 707 6.02e-11 67.0
Msa0216010 AT2G32700.3 24.348 230 141 7 563 791 510 707 6.02e-11 67.0

Find 211 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAACACAGATCCAATTTC+TGG 0.186809 2_1:-61690210 Msa0216010:CDS
GAGATTGCTGGCGTTGAATT+AGG 0.193175 2_1:-61692277 Msa0216010:CDS
TCCACTTCGTTACCAGAAAT+TGG 0.194531 2_1:+61690198 None:intergenic
CCCTCATTTCAGATAGTATT+TGG 0.203996 2_1:+61691210 None:intergenic
TTTAAATCTAGTTTGCTTCT+TGG 0.245768 2_1:+61692300 None:intergenic
TGCATGAGTGTAAAACAATT+TGG 0.263218 2_1:-61694441 Msa0216010:five_prime_UTR
GTGGCAAATTCTGATCAATT+TGG 0.276190 2_1:-61694816 Msa0216010:five_prime_UTR
TCTAGGGCTTTGAATAGTTC+TGG 0.281809 2_1:-61694335 Msa0216010:CDS
CGGACAACACTTTGAAGCTT+TGG 0.288842 2_1:-61690733 Msa0216010:CDS
TGGAGAATTCTGAGAGTTCT+AGG 0.297018 2_1:-61694352 Msa0216010:CDS
GATACCAGCTCAGATTCTTT+AGG 0.297395 2_1:-61693933 Msa0216010:CDS
CTGATTCAATAAACGATATA+TGG 0.308875 2_1:+61693967 None:intergenic
CACAGGGAATGTCAAGATTC+TGG 0.313427 2_1:-61690106 Msa0216010:CDS
GCGAGGGATCACAAGATTCT+AGG 0.323621 2_1:-61694274 Msa0216010:CDS
GGAGTACCAGCAACCTCTTC+AGG 0.326596 2_1:+61693603 None:intergenic
ATCAAAATAATCACCAACTA+TGG 0.332039 2_1:-61689295 Msa0216010:CDS
CTGTGGAATTTGCAGCGATT+AGG 0.338154 2_1:+61690124 None:intergenic
GGACAACACTTTGAAGCTTT+GGG 0.345308 2_1:-61690732 Msa0216010:CDS
CAACGAACAAAGAGATGATA+TGG 0.349512 2_1:-61692476 Msa0216010:CDS
CACTTGCGCCGTCCCTTCCT+TGG 0.349854 2_1:+61691912 None:intergenic
GCAAAAGATCTCCTTGCTTC+AGG 0.354806 2_1:+61691819 None:intergenic
AAATCAGCTGGAGGATTAGA+AGG 0.360664 2_1:+61689059 None:intergenic
AGATTGCTGGCGTTGAATTA+GGG 0.361800 2_1:-61692276 Msa0216010:CDS
CTGCCACTCGCCAACATTGT+TGG 0.363402 2_1:+61691143 None:intergenic
TTTCAGTAAGCTTAAAGTTA+AGG 0.364391 2_1:-61691846 Msa0216010:CDS
TGTGGAATTTGCAGCGATTA+GGG 0.369825 2_1:+61690125 None:intergenic
AAGGAAAGGGATTGGATTCA+TGG 0.376493 2_1:-61694245 Msa0216010:CDS
GCTTCAGATGTTTACCGATT+GGG 0.378627 2_1:-61693570 Msa0216010:CDS
CGAAACTGAGTGAGCATACT+AGG 0.382859 2_1:+61691786 None:intergenic
CGGTAGTGGAGATGGCTTGC+AGG 0.382964 2_1:-61691664 Msa0216010:CDS
TCCGCTCGATACCTCGCATT+TGG 0.384898 2_1:-61690887 Msa0216010:CDS
CCGAGCATCCGTCGAAATCT+TGG 0.388807 2_1:+61693800 None:intergenic
AGCAAACCTCAGAAACAATT+AGG 0.391642 2_1:-61689248 Msa0216010:intron
AGTTTGTCTCCTCGGTTTGT+TGG 0.397933 2_1:-61690164 Msa0216010:CDS
TTCTAGGTTTAGAAAGGAAA+GGG 0.399429 2_1:-61694258 Msa0216010:CDS
TAATCACCAACTATGGACTA+TGG 0.402900 2_1:-61689288 Msa0216010:CDS
GGATAAACTTTAGTCCTTTG+TGG 0.403438 2_1:-61694795 Msa0216010:five_prime_UTR
AAGAAAATAAAATGAAAGAT+AGG 0.405637 2_1:-61693710 Msa0216010:CDS
ATGCTGTGTTCAGTTTCCTC+TGG 0.417797 2_1:-61690912 Msa0216010:CDS
CCCGGGTCTTCCTGAGGAAT+AGG 0.421875 2_1:+61692021 None:intergenic
ATTATGCATCAGCAGAGTTT+CGG 0.426090 2_1:-61693843 Msa0216010:CDS
TATTGAATCAGCTTCTTGTT+CGG 0.430659 2_1:-61693955 Msa0216010:CDS
ACTAGATTTAAAGAGATTGC+TGG 0.434198 2_1:-61692289 Msa0216010:CDS
GTGCCGCTTTGCACTTTAGT+TGG 0.435655 2_1:-61690818 Msa0216010:CDS
TTCAGGTTGTTAACTTTGAC+TGG 0.435846 2_1:-61694577 Msa0216010:intron
CACTGGTCACACAAATGTTA+AGG 0.441780 2_1:-61690660 Msa0216010:intron
GATGAAACAGATACTTCTAA+TGG 0.445082 2_1:-61693646 Msa0216010:CDS
TCAGCGGGAGGATCCGCAAT+TGG 0.448780 2_1:+61688968 None:intergenic
ACAAGATTCTAGGTTTAGAA+AGG 0.452039 2_1:-61694264 Msa0216010:CDS
GGTTTAGAAAGGAAAGGGAT+TGG 0.452703 2_1:-61694253 Msa0216010:CDS
CCTAGTGTTGGACGACTGCT+AGG 0.455318 2_1:+61692990 None:intergenic
GAAGGGACGGCGCAAGTGCT+TGG 0.457970 2_1:-61691907 Msa0216010:CDS
TCTGATGGTTATATTGCTAC+TGG 0.459300 2_1:-61690486 Msa0216010:CDS
TGCCGCACAGTTTGTCTCCT+CGG 0.459384 2_1:-61690172 Msa0216010:CDS
GAGGCAATGGTTGGATAAAC+CGG 0.464801 2_1:-61694120 Msa0216010:CDS
TGCTTCAGATGTTTACCGAT+TGG 0.466209 2_1:-61693571 Msa0216010:CDS
TCGATACCTCGCATTTGGTT+CGG 0.470145 2_1:-61690882 Msa0216010:CDS
CCATCTCCACTACCGGATAG+TGG 0.470298 2_1:+61691672 None:intergenic
GATTCACCATAGTCCATAGT+TGG 0.471951 2_1:+61689282 None:intergenic
AAGAAATCCACCGATCGATC+CGG 0.472606 2_1:+61694101 None:intergenic
GCCAAATACTATCTGAAATG+AGG 0.473156 2_1:-61691211 Msa0216010:CDS
CGGGGTTAGACATTCGCATA+TGG 0.475562 2_1:-61692002 Msa0216010:CDS
AAGAAGTTGCATCAATAACT+TGG 0.479833 2_1:-61691945 Msa0216010:CDS
TTGCACAAACCCTCAAGAAA+AGG 0.481493 2_1:+61691878 None:intergenic
CATTCGCATATGGCAAATGT+TGG 0.482596 2_1:-61691992 Msa0216010:CDS
TAGGAGGAAGGATGAAGAAG+TGG 0.482637 2_1:-61693691 Msa0216010:CDS
TCCTATTCCTCAGGAAGACC+CGG 0.482754 2_1:-61692022 Msa0216010:CDS
CCAAGATTTCGACGGATGCT+CGG 0.485967 2_1:-61693800 Msa0216010:CDS
CTTCAGATGTTTACCGATTG+GGG 0.486473 2_1:-61693569 Msa0216010:CDS
TGAAACTTGAATTGTAATGC+TGG 0.489153 2_1:+61690231 None:intergenic
AGCTCAGATTCTTTAGGAGA+TGG 0.489447 2_1:-61693927 Msa0216010:CDS
CCTAGCAGTCGTCCAACACT+AGG 0.490972 2_1:-61692990 Msa0216010:CDS
CTCCACAGTTACTTCTAAAG+TGG 0.491713 2_1:-61693055 Msa0216010:CDS
GTCTCCTCGGTTTGTTGGCG+TGG 0.492169 2_1:-61690159 Msa0216010:CDS
TTGTGTTAACAAGGTGATGA+TGG 0.494816 2_1:-61694467 Msa0216010:five_prime_UTR
ATGACAGGTTTCAAATCAGC+TGG 0.498086 2_1:+61689047 None:intergenic
GGAATACCTAATTGTTTCTG+AGG 0.498457 2_1:+61689242 None:intergenic
TTGAATTGTAATGCTGGCAT+AGG 0.499477 2_1:+61690237 None:intergenic
GTGATATTAGTTTGAGGCAA+TGG 0.499816 2_1:-61694133 Msa0216010:CDS
TAAGCTATGGAGTATCAATC+AGG 0.501434 2_1:-61691105 Msa0216010:CDS
CATTTGGTTCGGCAGATCAC+CGG 0.502220 2_1:-61690871 Msa0216010:CDS
GTTGGACGACTGCTAGGGTC+AGG 0.502364 2_1:+61692996 None:intergenic
TGTGATCCCTCGCCGGAGAA+AGG 0.508129 2_1:+61694284 None:intergenic
CAAAGCTGAGCAGTTTATGT+TGG 0.508521 2_1:-61691640 Msa0216010:CDS
CAAAGGGAAAATCCTTTCTC+CGG 0.511339 2_1:-61694296 Msa0216010:CDS
ACTAGTCCTGAAGAGGTTGC+TGG 0.512720 2_1:-61693609 Msa0216010:CDS
TTCTTTGTTTAAGTAATGAA+AGG 0.514247 2_1:+61692389 None:intergenic
CCACTATCCGGTAGTGGAGA+TGG 0.514371 2_1:-61691672 Msa0216010:CDS
GAATTTGCAGCGATTAGGGT+TGG 0.515210 2_1:+61690129 None:intergenic
TACTTCTAATGGAGATGAGT+TGG 0.516417 2_1:-61693635 Msa0216010:CDS
TGTCATTACACCTTCAATTG+TGG 0.516570 2_1:-61689030 Msa0216010:CDS
GGATCGTGATATCCACTATC+CGG 0.517484 2_1:-61691684 Msa0216010:CDS
TATTAGTTTGAGGCAATGGT+TGG 0.517532 2_1:-61694129 Msa0216010:CDS
TGCAAACCATCCTATTCCTC+AGG 0.518455 2_1:-61692031 Msa0216010:CDS
TTATGTTATGTACCTCGAAA+AGG 0.521023 2_1:+61693541 None:intergenic
TGGCTTTGAAAGACCAAGGA+AGG 0.521816 2_1:-61691925 Msa0216010:CDS
GCAGAAGGATCCACAATTGA+AGG 0.523577 2_1:+61689020 None:intergenic
ACGATAAATTACCCTAGTGT+TGG 0.524771 2_1:+61692978 None:intergenic
ATTAGAAGTATCTGTTTCAT+CGG 0.525069 2_1:+61693648 None:intergenic
ATGTGATACAATCATAAAAG+AGG 0.527633 2_1:-61691705 Msa0216010:CDS
AATGGGGTGATATTAGTTTG+AGG 0.528270 2_1:-61694139 Msa0216010:CDS
CTATCAATGACTGTCATGGA+TGG 0.529305 2_1:+61692226 None:intergenic
AAGCAAAATGAAGCTTCCTT+AGG 0.530700 2_1:+61693032 None:intergenic
ATCATCAAAGTTAATAAATG+AGG 0.532046 2_1:+61694847 None:intergenic
GTTGGATAAACCGGATCGAT+CGG 0.532948 2_1:-61694111 Msa0216010:CDS
ACATCTGAAGCACATGAACT+AGG 0.533132 2_1:+61693582 None:intergenic
GAATTGTGATCAAGAGAGAT+TGG 0.533596 2_1:-61694540 Msa0216010:five_prime_UTR
ACAATTGAAGGTGTAATGAC+AGG 0.534543 2_1:+61689032 None:intergenic
GAATGTCAAGATTCTGGAGA+TGG 0.535353 2_1:-61690100 Msa0216010:intron
ATTCTAGGTTTAGAAAGGAA+AGG 0.537012 2_1:-61694259 Msa0216010:CDS
CTAATCGCTGCAAATTCCAC+AGG 0.537152 2_1:-61690123 Msa0216010:CDS
TATCATCTCTTTGTTCGTTG+AGG 0.537830 2_1:+61692479 None:intergenic
ACTAGAAAACGAGTCAGACT+AGG 0.538617 2_1:-61692181 Msa0216010:CDS
GTAGATCATAGTAATATATC+CGG 0.539126 2_1:+61690852 None:intergenic
CCAAATACTATCTGAAATGA+GGG 0.542104 2_1:-61691210 Msa0216010:CDS
GAAAATCCTTTCTCCGGCGA+GGG 0.544427 2_1:-61694290 Msa0216010:CDS
CAACCTTGTCTCTGCATCCA+CGG 0.545526 2_1:-61690753 Msa0216010:CDS
GGAGAATTCTGAGAGTTCTA+GGG 0.545984 2_1:-61694351 Msa0216010:CDS
AAAATAAAATGAAAGATAGG+AGG 0.548573 2_1:-61693707 Msa0216010:CDS
ATTCGCATATGGCAAATGTT+GGG 0.549190 2_1:-61691991 Msa0216010:CDS
CATTCAACTGAACAAAAGAA+AGG 0.549626 2_1:+61694158 None:intergenic
TGAATTGTAATGCTGGCATA+GGG 0.551515 2_1:+61690238 None:intergenic
GTTACTTCTAAAGTGGCCTA+AGG 0.552782 2_1:-61693048 Msa0216010:CDS
ACGACGGTTCAGTTAAGCTA+TGG 0.554543 2_1:-61691118 Msa0216010:CDS
TTCTCTTCTCTTGAGCTCAG+TGG 0.555018 2_1:+61693116 None:intergenic
TCGCCGATTCAATCGTTCAC+TGG 0.555130 2_1:-61690677 Msa0216010:CDS
TAGACAAAAGATAGAAGATG+AGG 0.557935 2_1:-61692428 Msa0216010:CDS
AGGAAGGATGAAGAAGTGGA+AGG 0.557944 2_1:-61693687 Msa0216010:CDS
CTGCAAGCCATCTCCACTAC+CGG 0.557989 2_1:+61691665 None:intergenic
CTCGCTATCAATGACTGTCA+TGG 0.558808 2_1:+61692222 None:intergenic
GTGGGATTATCAGTATCTGA+TGG 0.560702 2_1:-61690501 Msa0216010:CDS
ATCAGCAGATCCAACAATGT+TGG 0.562973 2_1:-61691153 Msa0216010:CDS
ATAGTTCTGGAGTCTCAGAT+AGG 0.563617 2_1:-61694322 Msa0216010:CDS
ATCTCCTAAAGAATCTGAGC+TGG 0.565194 2_1:+61693929 None:intergenic
GCATCCGTCGAAATCTTGGC+AGG 0.567107 2_1:+61693804 None:intergenic
TAAAATGAAAGATAGGAGGA+AGG 0.572736 2_1:-61693703 Msa0216010:CDS
TGATATCCACTATCCGGTAG+TGG 0.572970 2_1:-61691678 Msa0216010:CDS
CGAAAAGGAGAATCCCCAAT+CGG 0.573159 2_1:+61693556 None:intergenic
ACTGAGTGAGCATACTAGGT+TGG 0.574949 2_1:+61691790 None:intergenic
TATGCCTGCCAAGATTTCGA+CGG 0.577851 2_1:-61693808 Msa0216010:CDS
ATTAATTGCACCTCCAATTG+CGG 0.582846 2_1:-61688981 Msa0216010:CDS
AGAATCTTGTGATCCCTCGC+CGG 0.584092 2_1:+61694277 None:intergenic
AGTCTCAGATAGGAACCAAA+GGG 0.584235 2_1:-61694312 Msa0216010:CDS
CATATGGCAAATGTTGGGAG+AGG 0.584666 2_1:-61691986 Msa0216010:CDS
TTGGCGAGTGGCAGCGACGA+CGG 0.584707 2_1:-61691134 Msa0216010:CDS
ACTTTGATGATGTGTGGTGG+TGG 0.585646 2_1:-61694835 Msa0216010:five_prime_UTR
GATTGGATTCATGGTGCACA+AGG 0.586798 2_1:-61694236 Msa0216010:CDS
CTAGAAAACGAGTCAGACTA+GGG 0.588405 2_1:-61692180 Msa0216010:CDS
GCGGGAGGATCCGCAATTGG+AGG 0.589372 2_1:+61688971 None:intergenic
TCCAATTTCTGGTAACGAAG+TGG 0.592211 2_1:-61690199 Msa0216010:CDS
GGTCTTCCTGAGGAATAGGA+TGG 0.593940 2_1:+61692025 None:intergenic
GTTAAGGCTGACCTGAAGCA+AGG 0.599999 2_1:-61691830 Msa0216010:CDS
GAAAGACGACATGACAAAGC+AGG 0.603503 2_1:+61693992 None:intergenic
TTATTGCAGGGAGTTAGTAT+CGG 0.604289 2_1:-61690959 Msa0216010:intron
CACCCTCACAAAACCCACCT+AGG 0.606177 2_1:+61694198 None:intergenic
TAAACTTTAGTCCTTTGTGG+TGG 0.606256 2_1:-61694792 Msa0216010:intron
CCTATTCCTCAGGAAGACCC+GGG 0.606287 2_1:-61692021 Msa0216010:CDS
CTGAAATGAGGGAGCACGAG+CGG 0.606838 2_1:-61691199 Msa0216010:CDS
ATATGCGAATGTCTAACCCC+GGG 0.608225 2_1:+61692004 None:intergenic
CTGGCATAGGGAAGGCCTTG+TGG 0.608565 2_1:+61690250 None:intergenic
GGGAGCACGAGCGGCGAGTG+TGG 0.609522 2_1:-61691190 Msa0216010:CDS
TCACGAGGACAGTGAGATGT+CGG 0.610989 2_1:+61693867 None:intergenic
CATATGCGAATGTCTAACCC+CGG 0.611698 2_1:+61692003 None:intergenic
TTAACTTTGATGATGTGTGG+TGG 0.612056 2_1:-61694838 Msa0216010:five_prime_UTR
TTATTAACTTTGATGATGTG+TGG 0.613791 2_1:-61694841 Msa0216010:five_prime_UTR
TCTGACTTCATATCAGCAGA+AGG 0.614819 2_1:+61689005 None:intergenic
GAGTCTCAGATAGGAACCAA+AGG 0.614873 2_1:-61694313 Msa0216010:CDS
TGACCAGTGAACGATTGAAT+CGG 0.616721 2_1:+61690674 None:intergenic
TTGTAATGCTGGCATAGGGA+AGG 0.617129 2_1:+61690242 None:intergenic
AACTTGGCTTTGAAAGACCA+AGG 0.617445 2_1:-61691929 Msa0216010:CDS
GGATAAACCGGATCGATCGG+TGG 0.618670 2_1:-61694108 Msa0216010:CDS
GTTAATGCAGCACACTGTCA+AGG 0.619174 2_1:-61694041 Msa0216010:CDS
GGAAAATCCTTTCTCCGGCG+AGG 0.620236 2_1:-61694291 Msa0216010:CDS
CTAGTGTTGGACGACTGCTA+GGG 0.623492 2_1:+61692991 None:intergenic
TTGGTACACTAGTCCTGAAG+AGG 0.623536 2_1:-61693616 Msa0216010:CDS
CATGACAGTCATTGATAGCG+AGG 0.625323 2_1:-61692221 Msa0216010:CDS
TTGAAAGACCAAGGAAGGGA+CGG 0.625382 2_1:-61691920 Msa0216010:CDS
GGCTTTGAAAGACCAAGGAA+GGG 0.631883 2_1:-61691924 Msa0216010:CDS
TCACTCAGTTTCGACCGTGA+TGG 0.639507 2_1:-61691776 Msa0216010:CDS
ACAGGTTTCAAATCAGCTGG+AGG 0.643077 2_1:+61689050 None:intergenic
GCTGTCAAGTGCTGTGTACG+CGG 0.643091 2_1:-61693760 Msa0216010:CDS
CTGACCACGCCAACAAACCG+AGG 0.643860 2_1:+61690155 None:intergenic
CACTTTAGAAGTAACTGTGG+AGG 0.645029 2_1:+61693056 None:intergenic
CTAGCAGTCGTCCAACACTA+GGG 0.652200 2_1:-61692989 Msa0216010:intron
ATATGGCAAATGTTGGGAGA+GGG 0.653155 2_1:-61691985 Msa0216010:CDS
TCTAACCCCGGGTCTTCCTG+AGG 0.654026 2_1:+61692015 None:intergenic
TTTAGTTGGACATAATAAGA+CGG 0.654445 2_1:-61690804 Msa0216010:CDS
GGCCACTTTAGAAGTAACTG+TGG 0.654479 2_1:+61693053 None:intergenic
AAGCTTCAAAGTGTTGTCCG+TGG 0.661126 2_1:+61690736 None:intergenic
GATCCAACAATGTTGGCGAG+TGG 0.662196 2_1:-61691146 Msa0216010:CDS
CGATGAATGTGATGATAACG+TGG 0.662668 2_1:-61692149 Msa0216010:CDS
CAACGACCAAGGAGGTGTTG+AGG 0.668571 2_1:-61693898 Msa0216010:CDS
TATCGGTACCATCAAAACGA+AGG 0.669721 2_1:-61690942 Msa0216010:CDS
TGTCCGTGGATGCAGAGACA+AGG 0.670812 2_1:+61690750 None:intergenic
GACGACATGACAAAGCAGGA+AGG 0.671729 2_1:+61693996 None:intergenic
TACTGGTTCAGAGACAAATG+AGG 0.673770 2_1:-61690469 Msa0216010:intron
AAAACACATAACCACCACAA+AGG 0.677604 2_1:+61694781 None:intergenic
AGGTATCGAGCGGAATCCAG+AGG 0.679655 2_1:+61690896 None:intergenic
CAGAATCTTGACATTCCCTG+TGG 0.680031 2_1:+61690107 None:intergenic
ATGGAAAAGTTGATGCTGAA+CGG 0.681431 2_1:+61692245 None:intergenic
ACCAAATGCGAGGTATCGAG+CGG 0.687037 2_1:+61690886 None:intergenic
GATGGAGTAAACAACGACCA+AGG 0.692153 2_1:-61693909 Msa0216010:CDS
GTGTTGTTGTTCATAATGTG+AGG 0.694957 2_1:-61694019 Msa0216010:CDS
TAATCGCTGCAAATTCCACA+GGG 0.700995 2_1:-61690122 Msa0216010:CDS
TGCTGATGCATAATATCACG+AGG 0.702535 2_1:+61693852 None:intergenic
CTATTCCTCAGGAAGACCCG+GGG 0.706537 2_1:-61692020 Msa0216010:CDS
TTAGGTGTTCGTATACCACA+AGG 0.715195 2_1:-61690265 Msa0216010:intron
GATCTGCCGAACCAAATGCG+AGG 0.727490 2_1:+61690876 None:intergenic
TGTCCAACTAAAGTGCAAAG+CGG 0.727757 2_1:+61690815 None:intergenic
AACCGAGGAGACAAACTGTG+CGG 0.739290 2_1:+61690170 None:intergenic
GGAGTAAACAACGACCAAGG+AGG 0.765141 2_1:-61693906 Msa0216010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTATTTTGTTTAAAAAA+AGG - chr2_1:61693551-61693570 Msa0216010:intron 10.0%
!! TATTAAATTGTTATATATAG+AGG - chr2_1:61693863-61693882 Msa0216010:CDS 10.0%
!! ATTAAATTGTTATATATAGA+GGG - chr2_1:61693864-61693883 Msa0216010:CDS 10.0%
!! TTATTATTATTAGATTATAG+CGG - chr2_1:61693941-61693960 Msa0216010:CDS 10.0%
!! AAGAAAATAAAATGAAAGAT+AGG - chr2_1:61690165-61690184 Msa0216010:CDS 15.0%
!!! TTTTGTATATATATTAATGC+TGG - chr2_1:61692860-61692879 Msa0216010:intron 15.0%
!!! ATTGTTACTTCAAAATAAAT+TGG + chr2_1:61693467-61693486 None:intergenic 15.0%
!! TTAAATTGTTATATATAGAG+GGG - chr2_1:61693865-61693884 Msa0216010:CDS 15.0%
!! AAACTATAACATAATTAACT+TGG - chr2_1:61694678-61694697 Msa0216010:intron 15.0%
!! GTTTAAGAAAAATTAGTAAA+GGG + chr2_1:61694775-61694794 None:intergenic 15.0%
!! TGTTTAAGAAAAATTAGTAA+AGG + chr2_1:61694776-61694795 None:intergenic 15.0%
!! ATCATCAAAGTTAATAAATG+AGG + chr2_1:61689031-61689050 None:intergenic 20.0%
!!! TGAATAAAGTTTTTGAATTC+AGG - chr2_1:61689281-61689300 Msa0216010:CDS 20.0%
!!! TCTTGATATTGATTTTTTGT+TGG - chr2_1:61689358-61689377 Msa0216010:intron 20.0%
!!! ATATTTTAAGTGGATAAAGA+TGG - chr2_1:61689503-61689522 Msa0216010:intron 20.0%
!! AAAATAAAATGAAAGATAGG+AGG - chr2_1:61690168-61690187 Msa0216010:CDS 20.0%
!!! ATTTTTTATTTGAGCTTTGT+TGG - chr2_1:61690412-61690431 Msa0216010:intron 20.0%
!! TAGTTTATATGAAAACAGTT+TGG - chr2_1:61690552-61690571 Msa0216010:intron 20.0%
!! ATATCAAGTATCCATTTAAA+AGG - chr2_1:61690937-61690956 Msa0216010:CDS 20.0%
!!! AAGAAAACAATCCTTTTAAA+TGG + chr2_1:61690951-61690970 None:intergenic 20.0%
!! TCATTCTCTCAAATTATTAT+CGG - chr2_1:61691105-61691124 Msa0216010:CDS 20.0%
!!! TTCTTTGTTTAAGTAATGAA+AGG + chr2_1:61691489-61691508 None:intergenic 20.0%
!! TAACTTTATTATAACACATG+TGG - chr2_1:61693255-61693274 Msa0216010:intron 20.0%
!! TATATATGTTGCATTTATTG+TGG - chr2_1:61694162-61694181 Msa0216010:CDS 20.0%
!! ATACATAGATATATAAAGTG+GGG + chr2_1:61694240-61694259 None:intergenic 20.0%
!! CATACATAGATATATAAAGT+GGG + chr2_1:61694241-61694260 None:intergenic 20.0%
!! TTAAACATTGTTTCAGATAT+GGG - chr2_1:61694789-61694808 Msa0216010:intron 20.0%
!!! TTATTAACTTTGATGATGTG+TGG - chr2_1:61689034-61689053 Msa0216010:CDS 25.0%
!!! AAATGAGTTTTGTGTTAACA+AGG - chr2_1:61689399-61689418 Msa0216010:intron 25.0%
!!! CTACATGCAAATATTTTAAG+TGG - chr2_1:61689493-61689512 Msa0216010:intron 25.0%
!! TTTCTTTTGTTCAGTTGAAT+GGG - chr2_1:61689719-61689738 Msa0216010:intron 25.0%
! CTGATTCAATAAACGATATA+TGG + chr2_1:61689911-61689930 None:intergenic 25.0%
!!! ATTAGAAGTATCTGTTTCAT+CGG + chr2_1:61690230-61690249 None:intergenic 25.0%
! TATATTTCATTTCGATACTC+TGG - chr2_1:61690379-61690398 Msa0216010:intron 25.0%
!!! TAAGTACTTCTGAGAATTTT+TGG - chr2_1:61690437-61690456 Msa0216010:intron 25.0%
!!! AAGTACTTCTGAGAATTTTT+GGG - chr2_1:61690438-61690457 Msa0216010:intron 25.0%
!!! TTTTTCAGCTTATTCTCATA+AGG - chr2_1:61690500-61690519 Msa0216010:CDS 25.0%
! ATATATGCAGTATTAATGAC+GGG + chr2_1:61691324-61691343 None:intergenic 25.0%
! CATATATGCAGTATTAATGA+CGG + chr2_1:61691325-61691344 None:intergenic 25.0%
!!! GTTTATTTTCTTGTGTATCA+GGG - chr2_1:61691354-61691373 Msa0216010:intron 25.0%
!!! TTTAAATCTAGTTTGCTTCT+TGG + chr2_1:61691578-61691597 None:intergenic 25.0%
! TTTCAGTAAGCTTAAAGTTA+AGG - chr2_1:61692029-61692048 Msa0216010:CDS 25.0%
! ATGTGATACAATCATAAAAG+AGG - chr2_1:61692170-61692189 Msa0216010:CDS 25.0%
!! ATTGCTTCAAGTAATTTTGA+AGG - chr2_1:61692279-61692298 Msa0216010:CDS 25.0%
!! AAATGCCATTGACAAATTTT+TGG - chr2_1:61692319-61692338 Msa0216010:CDS 25.0%
! AGAAACCAAAAATTTGTCAA+TGG + chr2_1:61692327-61692346 None:intergenic 25.0%
! ATAACTATAATGCATGTAGT+TGG - chr2_1:61692347-61692366 Msa0216010:CDS 25.0%
! CAAATTGCGTTTAAATACTA+TGG + chr2_1:61692437-61692456 None:intergenic 25.0%
! TTGTTATCTTATTCAGCTAT+GGG - chr2_1:61692629-61692648 Msa0216010:intron 25.0%
! GTAGATCATAGTAATATATC+CGG + chr2_1:61693026-61693045 None:intergenic 25.0%
! TTTAGTTGGACATAATAAGA+CGG - chr2_1:61693071-61693090 Msa0216010:CDS 25.0%
!!! ATTCTGAAACAAAAGAAACA+TGG + chr2_1:61693351-61693370 None:intergenic 25.0%
!!! TCTTTTGTTTCAGAATTTTG+TGG - chr2_1:61693355-61693374 Msa0216010:intron 25.0%
!!! CTTTTGTTTCAGAATTTTGT+GGG - chr2_1:61693356-61693375 Msa0216010:intron 25.0%
!!! GTTTGCTACAGATATATTTT+CGG + chr2_1:61693512-61693531 None:intergenic 25.0%
! GGACTGTGTAAAATTTAATA+TGG + chr2_1:61694090-61694109 None:intergenic 25.0%
! CATGGTAACAAAAAATATCA+AGG + chr2_1:61694201-61694220 None:intergenic 25.0%
! TACATAGATATATAAAGTGG+GGG + chr2_1:61694239-61694258 None:intergenic 25.0%
! CCATACATAGATATATAAAG+TGG + chr2_1:61694242-61694261 None:intergenic 25.0%
! CCACTTTATATATCTATGTA+TGG - chr2_1:61694239-61694258 Msa0216010:CDS 25.0%
! CAAAGTAAGAATAGAAATCA+CGG - chr2_1:61694474-61694493 Msa0216010:five_prime_UTR 25.0%
! AAAGTAAGAATAGAAATCAC+GGG - chr2_1:61694475-61694494 Msa0216010:five_prime_UTR 25.0%
!! TTGTACCAATTATTTCTCTA+GGG + chr2_1:61694523-61694542 None:intergenic 25.0%
! ATCAAAATAATCACCAACTA+TGG - chr2_1:61694580-61694599 Msa0216010:intron 25.0%
! AAATTAGTAAAGGGAAAAGT+TGG + chr2_1:61694766-61694785 None:intergenic 25.0%
! CTTAAACATTGTTTCAGATA+TGG - chr2_1:61694788-61694807 Msa0216010:intron 25.0%
TGCATGAGTGTAAAACAATT+TGG - chr2_1:61689434-61689453 Msa0216010:intron 30.0%
! TGGAAGAGTTTTCTATTTGT+TGG - chr2_1:61689454-61689473 Msa0216010:intron 30.0%
ACAAGATTCTAGGTTTAGAA+AGG - chr2_1:61689611-61689630 Msa0216010:intron 30.0%
ATTCTAGGTTTAGAAAGGAA+AGG - chr2_1:61689616-61689635 Msa0216010:intron 30.0%
TTCTAGGTTTAGAAAGGAAA+GGG - chr2_1:61689617-61689636 Msa0216010:intron 30.0%
ATCAAAACAAAAACCTAGGT+GGG - chr2_1:61689664-61689683 Msa0216010:intron 30.0%
CATTCAACTGAACAAAAGAA+AGG + chr2_1:61689720-61689739 None:intergenic 30.0%
! CTTTCTTTTGTTCAGTTGAA+TGG - chr2_1:61689718-61689737 Msa0216010:intron 30.0%
! TTCTTTTGTTCAGTTGAATG+GGG - chr2_1:61689720-61689739 Msa0216010:intron 30.0%
TATTGAATCAGCTTCTTGTT+CGG - chr2_1:61689920-61689939 Msa0216010:intron 30.0%
TAAAATGAAAGATAGGAGGA+AGG - chr2_1:61690172-61690191 Msa0216010:CDS 30.0%
GATGAAACAGATACTTCTAA+TGG - chr2_1:61690229-61690248 Msa0216010:CDS 30.0%
TTATGTTATGTACCTCGAAA+AGG + chr2_1:61690337-61690356 None:intergenic 30.0%
!! AAACATACAAAGGCTTTGTT+TGG + chr2_1:61690635-61690654 None:intergenic 30.0%
GGAGAAGATAAAACATACAA+AGG + chr2_1:61690645-61690664 None:intergenic 30.0%
CTACTTCTAACACAACAAAA+TGG + chr2_1:61690666-61690685 None:intergenic 30.0%
AAATGTAGGATAACGAAGTT+AGG + chr2_1:61690724-61690743 None:intergenic 30.0%
CACACAAATAGTTTAATCTC+AGG + chr2_1:61691041-61691060 None:intergenic 30.0%
CTGAGATTAAACTATTTGTG+TGG - chr2_1:61691039-61691058 Msa0216010:intron 30.0%
TCTTTCTTTGTTGAATCATG+AGG - chr2_1:61691076-61691095 Msa0216010:CDS 30.0%
ATATGAGCTTAATGAACAAC+TGG + chr2_1:61691194-61691213 None:intergenic 30.0%
! AAGCTCATATGATTTTTACC+TGG - chr2_1:61691204-61691223 Msa0216010:CDS 30.0%
!! CGTTTATTTTCTTGTGTATC+AGG - chr2_1:61691353-61691372 Msa0216010:intron 30.0%
TAGACAAAAGATAGAAGATG+AGG - chr2_1:61691447-61691466 Msa0216010:intron 30.0%
ACTAGATTTAAAGAGATTGC+TGG - chr2_1:61691586-61691605 Msa0216010:CDS 30.0%
AAGAAGTTGCATCAATAACT+TGG - chr2_1:61691930-61691949 Msa0216010:CDS 30.0%
! TTGGATAAATCCTTTTCTTG+AGG - chr2_1:61691987-61692006 Msa0216010:CDS 30.0%
! TGGATAAATCCTTTTCTTGA+GGG - chr2_1:61691988-61692007 Msa0216010:CDS 30.0%
!!! TAATTTTGAAGGTGTTGTAC+AGG - chr2_1:61692290-61692309 Msa0216010:CDS 30.0%
TGGCTATGAATCATAGTTTA+CGG - chr2_1:61692367-61692386 Msa0216010:CDS 30.0%
!! AGTACTTGTTTTCTTTGAAC+CGG - chr2_1:61692579-61692598 Msa0216010:intron 30.0%
! CTTGTTATCTTATTCAGCTA+TGG - chr2_1:61692628-61692647 Msa0216010:intron 30.0%
! CCAAATACTATCTGAAATGA+GGG - chr2_1:61692665-61692684 Msa0216010:intron 30.0%
!! CAAAATTCCATTTTTGCACT+TGG - chr2_1:61692793-61692812 Msa0216010:intron 30.0%
AAATATCGTCTATGTGCATT+AGG - chr2_1:61693592-61693611 Msa0216010:CDS 30.0%
TGAAACTTGAATTGTAATGC+TGG + chr2_1:61693647-61693666 None:intergenic 30.0%
ATTTATAGATTGCTGTGTAG+AGG + chr2_1:61693811-61693830 None:intergenic 30.0%
TATAGTTTGATGTGAATGAG+AGG - chr2_1:61693837-61693856 Msa0216010:CDS 30.0%
! CTCTTTTACATTTTTCCATG+TGG + chr2_1:61694028-61694047 None:intergenic 30.0%
CACATGGAAAAATGTAAAAG+AGG - chr2_1:61694026-61694045 Msa0216010:CDS 30.0%
ACATGAACAACAAAATTACC+TGG - chr2_1:61694365-61694384 Msa0216010:exon 30.0%
! CTTTTTACTGCAATTACTGT+TGG + chr2_1:61694402-61694421 None:intergenic 30.0%
AAGAGTGAAAGCTATAAACA+AGG - chr2_1:61694419-61694438 Msa0216010:five_prime_UTR 30.0%
! GTTTTCCACATTAAAATTCG+AGG + chr2_1:61694448-61694467 None:intergenic 30.0%
! TGTACCAATTATTTCTCTAG+GGG + chr2_1:61694522-61694541 None:intergenic 30.0%
! GTTGTACCAATTATTTCTCT+AGG + chr2_1:61694524-61694543 None:intergenic 30.0%
!! TTAACTTTGATGATGTGTGG+TGG - chr2_1:61689037-61689056 Msa0216010:CDS 35.0%
GTGGCAAATTCTGATCAATT+TGG - chr2_1:61689059-61689078 Msa0216010:CDS 35.0%
GGATAAACTTTAGTCCTTTG+TGG - chr2_1:61689080-61689099 Msa0216010:intron 35.0%
TAAACTTTAGTCCTTTGTGG+TGG - chr2_1:61689083-61689102 Msa0216010:intron 35.0%
AAAACACATAACCACCACAA+AGG + chr2_1:61689097-61689116 None:intergenic 35.0%
!! TTCAGGTTGTTAACTTTGAC+TGG - chr2_1:61689298-61689317 Msa0216010:CDS 35.0%
GAATTGTGATCAAGAGAGAT+TGG - chr2_1:61689335-61689354 Msa0216010:intron 35.0%
TTGTGTTAACAAGGTGATGA+TGG - chr2_1:61689408-61689427 Msa0216010:intron 35.0%
GGTGATCAAAACAAAAACCT+AGG - chr2_1:61689660-61689679 Msa0216010:intron 35.0%
GATCAAAACAAAAACCTAGG+TGG - chr2_1:61689663-61689682 Msa0216010:intron 35.0%
! AATGGGGTGATATTAGTTTG+AGG - chr2_1:61689736-61689755 Msa0216010:intron 35.0%
! GTGATATTAGTTTGAGGCAA+TGG - chr2_1:61689742-61689761 Msa0216010:intron 35.0%
! TATTAGTTTGAGGCAATGGT+TGG - chr2_1:61689746-61689765 Msa0216010:intron 35.0%
! GTGTTGTTGTTCATAATGTG+AGG - chr2_1:61689856-61689875 Msa0216010:intron 35.0%
ATTATGCATCAGCAGAGTTT+CGG - chr2_1:61690032-61690051 Msa0216010:intron 35.0%
TACTTCTAATGGAGATGAGT+TGG - chr2_1:61690240-61690259 Msa0216010:CDS 35.0%
!! AGAATTTTTGGGAGAGCTTA+TGG - chr2_1:61690449-61690468 Msa0216010:intron 35.0%
GAGCTTATGGAAACAGTTTA+TGG - chr2_1:61690462-61690481 Msa0216010:intron 35.0%
CTTATTCTCATAAGGTCTTC+AGG - chr2_1:61690508-61690527 Msa0216010:CDS 35.0%
CAGAATAGCTGTTCAAATGT+AGG + chr2_1:61690738-61690757 None:intergenic 35.0%
AAGCAAAATGAAGCTTCCTT+AGG + chr2_1:61690846-61690865 None:intergenic 35.0%
! AGGAAGCTTCATTTTGCTTA+TGG - chr2_1:61690847-61690866 Msa0216010:CDS 35.0%
ACGATAAATTACCCTAGTGT+TGG + chr2_1:61690900-61690919 None:intergenic 35.0%
!! TTGAAGTACTGACAAAGACA+CGG + chr2_1:61691159-61691178 None:intergenic 35.0%
TGTCTTTGTCAGTACTTCAA+AGG - chr2_1:61691159-61691178 Msa0216010:CDS 35.0%
!! GTCAGTACTTCAAAGGTATT+TGG - chr2_1:61691166-61691185 Msa0216010:CDS 35.0%
GAAAGCAAAAACAAAGAACC+AGG + chr2_1:61691225-61691244 None:intergenic 35.0%
TGGAAATAGTCTAATCAGTC+AGG + chr2_1:61691299-61691318 None:intergenic 35.0%
TATCATCTCTTTGTTCGTTG+AGG + chr2_1:61691399-61691418 None:intergenic 35.0%
CAACGAACAAAGAGATGATA+TGG - chr2_1:61691399-61691418 Msa0216010:intron 35.0%
!! ATGGAAAAGTTGATGCTGAA+CGG + chr2_1:61691633-61691652 None:intergenic 35.0%
GAGAGTGATCAGAAAAATCA+TGG - chr2_1:61691748-61691767 Msa0216010:CDS 35.0%
ATTCGCATATGGCAAATGTT+GGG - chr2_1:61691884-61691903 Msa0216010:CDS 35.0%
TTGCGAAAAATTCTCCATCA+CGG + chr2_1:61692116-61692135 None:intergenic 35.0%
! GATTTTCTTATTCACACCAG+CGG + chr2_1:61692139-61692158 None:intergenic 35.0%
ATCATAGTTTACGGATACGT+TGG - chr2_1:61692376-61692395 Msa0216010:CDS 35.0%
GAACACATGGTATTTGATCA+CGG + chr2_1:61692544-61692563 None:intergenic 35.0%
!! GTACTTGTTTTCTTTGAACC+GGG - chr2_1:61692580-61692599 Msa0216010:intron 35.0%
!! TACTTGTTTTCTTTGAACCG+GGG - chr2_1:61692581-61692600 Msa0216010:intron 35.0%
! GCCAAATACTATCTGAAATG+AGG - chr2_1:61692664-61692683 Msa0216010:intron 35.0%
CCCTCATTTCAGATAGTATT+TGG + chr2_1:61692668-61692687 None:intergenic 35.0%
! TAAGCTATGGAGTATCAATC+AGG - chr2_1:61692770-61692789 Msa0216010:intron 35.0%
!! AATTCCATTTTTGCACTTGG+TGG - chr2_1:61692796-61692815 Msa0216010:intron 35.0%
TTATTGCAGGGAGTTAGTAT+CGG - chr2_1:61692916-61692935 Msa0216010:intron 35.0%
! TACATTTGCCTTCGTTTTGA+TGG + chr2_1:61692944-61692963 None:intergenic 35.0%
TCTGATGGTTATATTGCTAC+TGG - chr2_1:61693389-61693408 Msa0216010:intron 35.0%
TGAATTGTAATGCTGGCATA+GGG + chr2_1:61693640-61693659 None:intergenic 35.0%
TTGAATTGTAATGCTGGCAT+AGG + chr2_1:61693641-61693660 None:intergenic 35.0%
CAGCTTGCAAGTAATAATGA+AGG + chr2_1:61693901-61693920 None:intergenic 35.0%
GAGAAGAGTGAGATTTGATA+AGG - chr2_1:61693976-61693995 Msa0216010:CDS 35.0%
AAATGAGTAGCTTCCATGTA+GGG + chr2_1:61694116-61694135 None:intergenic 35.0%
AAAATGAGTAGCTTCCATGT+AGG + chr2_1:61694117-61694136 None:intergenic 35.0%
!!! CTGCTGAAGAGATTTTTTGA+TGG - chr2_1:61694273-61694292 Msa0216010:CDS 35.0%
GATTCTTTGTCAATTCCTAG+TGG + chr2_1:61694563-61694582 None:intergenic 35.0%
! TAATCACCAACTATGGACTA+TGG - chr2_1:61694587-61694606 Msa0216010:intron 35.0%
AGCAAACCTCAGAAACAATT+AGG - chr2_1:61694627-61694646 Msa0216010:intron 35.0%
!! GGAATACCTAATTGTTTCTG+AGG + chr2_1:61694636-61694655 None:intergenic 35.0%
GTCTTCTCTTTACATCAGTT+TGG + chr2_1:61694657-61694676 None:intergenic 35.0%
TTAGTAAAGGGAAAAGTTGG+TGG + chr2_1:61694763-61694782 None:intergenic 35.0%
! ACAATTGAAGGTGTAATGAC+AGG + chr2_1:61694846-61694865 None:intergenic 35.0%
TGTCATTACACCTTCAATTG+TGG - chr2_1:61694845-61694864 Msa0216010:five_prime_UTR 35.0%
ATTAATTGCACCTCCAATTG+CGG - chr2_1:61694894-61694913 Msa0216010:five_prime_UTR 35.0%
CTTATCTCTCTCTCTCTCTA+TGG - chr2_1:61688971-61688990 Msa0216010:CDS 40.0%
! TGGAGAATTCTGAGAGTTCT+AGG - chr2_1:61689523-61689542 Msa0216010:intron 40.0%
! GGAGAATTCTGAGAGTTCTA+GGG - chr2_1:61689524-61689543 Msa0216010:intron 40.0%
!! TCTAGGGCTTTGAATAGTTC+TGG - chr2_1:61689540-61689559 Msa0216010:intron 40.0%
!! ATAGTTCTGGAGTCTCAGAT+AGG - chr2_1:61689553-61689572 Msa0216010:intron 40.0%
AGTCTCAGATAGGAACCAAA+GGG - chr2_1:61689563-61689582 Msa0216010:intron 40.0%
CAAAGGGAAAATCCTTTCTC+CGG - chr2_1:61689579-61689598 Msa0216010:intron 40.0%
GGTTTAGAAAGGAAAGGGAT+TGG - chr2_1:61689622-61689641 Msa0216010:intron 40.0%
AAGGAAAGGGATTGGATTCA+TGG - chr2_1:61689630-61689649 Msa0216010:intron 40.0%
GATACCAGCTCAGATTCTTT+AGG - chr2_1:61689942-61689961 Msa0216010:intron 40.0%
ATCTCCTAAAGAATCTGAGC+TGG + chr2_1:61689949-61689968 None:intergenic 40.0%
! AGCTCAGATTCTTTAGGAGA+TGG - chr2_1:61689948-61689967 Msa0216010:intron 40.0%
! TTTTAACCTCAACACCTCCT+TGG + chr2_1:61689986-61690005 None:intergenic 40.0%
TGCTGATGCATAATATCACG+AGG + chr2_1:61690026-61690045 None:intergenic 40.0%
! ACATCTGAAGCACATGAACT+AGG + chr2_1:61690296-61690315 None:intergenic 40.0%
TGCTTCAGATGTTTACCGAT+TGG - chr2_1:61690304-61690323 Msa0216010:intron 40.0%
! GCTTCAGATGTTTACCGATT+GGG - chr2_1:61690305-61690324 Msa0216010:intron 40.0%
! CTTCAGATGTTTACCGATTG+GGG - chr2_1:61690306-61690325 Msa0216010:intron 40.0%
! CACTTTAGAAGTAACTGTGG+AGG + chr2_1:61690822-61690841 None:intergenic 40.0%
! CTCCACAGTTACTTCTAAAG+TGG - chr2_1:61690820-61690839 Msa0216010:CDS 40.0%
!! GTTACTTCTAAAGTGGCCTA+AGG - chr2_1:61690827-61690846 Msa0216010:CDS 40.0%
TCAATGCGAAACAGCTTGTA+AGG + chr2_1:61691015-61691034 None:intergenic 40.0%
! TGCAGTATTAATGACGGGAT+TGG + chr2_1:61691319-61691338 None:intergenic 40.0%
! AGATTGCTGGCGTTGAATTA+GGG - chr2_1:61691599-61691618 Msa0216010:CDS 40.0%
CTATCAATGACTGTCATGGA+TGG + chr2_1:61691652-61691671 None:intergenic 40.0%
ACTAGAAAACGAGTCAGACT+AGG - chr2_1:61691694-61691713 Msa0216010:CDS 40.0%
CTAGAAAACGAGTCAGACTA+GGG - chr2_1:61691695-61691714 Msa0216010:CDS 40.0%
! CGATGAATGTGATGATAACG+TGG - chr2_1:61691726-61691745 Msa0216010:CDS 40.0%
CATTCGCATATGGCAAATGT+TGG - chr2_1:61691883-61691902 Msa0216010:CDS 40.0%
ATATGGCAAATGTTGGGAGA+GGG - chr2_1:61691890-61691909 Msa0216010:CDS 40.0%
!! AACTTGGCTTTGAAAGACCA+AGG - chr2_1:61691946-61691965 Msa0216010:CDS 40.0%
TTGCACAAACCCTCAAGAAA+AGG + chr2_1:61692000-61692019 None:intergenic 40.0%
CAAAGCTGAGCAGTTTATGT+TGG - chr2_1:61692235-61692254 Msa0216010:CDS 40.0%
CTGAAAGCTTAGGGTTTACA+TGG + chr2_1:61692462-61692481 None:intergenic 40.0%
AAACCCTAAGCTTTCAGTGA+TGG - chr2_1:61692465-61692484 Msa0216010:CDS 40.0%
CTACCATCACTGAAAGCTTA+GGG + chr2_1:61692471-61692490 None:intergenic 40.0%
TCTACCATCACTGAAAGCTT+AGG + chr2_1:61692472-61692491 None:intergenic 40.0%
AGCTTTCAGTGATGGTAGAA+TGG - chr2_1:61692473-61692492 Msa0216010:CDS 40.0%
!! TTCTGAGATGTAGCCACAAT+TGG - chr2_1:61692511-61692530 Msa0216010:intron 40.0%
! TCTGAGATGTAGCCACAATT+GGG - chr2_1:61692512-61692531 Msa0216010:intron 40.0%
AAACGCAAACAGAGAACACA+TGG + chr2_1:61692557-61692576 None:intergenic 40.0%
ATCAGCAGATCCAACAATGT+TGG - chr2_1:61692722-61692741 Msa0216010:intron 40.0%
ACATCCACCAAGTGCAAAAA+TGG + chr2_1:61692803-61692822 None:intergenic 40.0%
!! ATGAGTTGTTTCTCTCACCT+GGG - chr2_1:61692890-61692909 Msa0216010:intron 40.0%
TATCGGTACCATCAAAACGA+AGG - chr2_1:61692933-61692952 Msa0216010:intron 40.0%
TGTCCAACTAAAGTGCAAAG+CGG + chr2_1:61693063-61693082 None:intergenic 40.0%
!! GGACAACACTTTGAAGCTTT+GGG - chr2_1:61693143-61693162 Msa0216010:intron 40.0%
TGACCAGTGAACGATTGAAT+CGG + chr2_1:61693204-61693223 None:intergenic 40.0%
CACTGGTCACACAAATGTTA+AGG - chr2_1:61693215-61693234 Msa0216010:intron 40.0%
GTGGGATTATCAGTATCTGA+TGG - chr2_1:61693374-61693393 Msa0216010:intron 40.0%
!! TACTGGTTCAGAGACAAATG+AGG - chr2_1:61693406-61693425 Msa0216010:intron 40.0%
TTAGGTGTTCGTATACCACA+AGG - chr2_1:61693610-61693629 Msa0216010:CDS 40.0%
CAGAACACAGATCCAATTTC+TGG - chr2_1:61693665-61693684 Msa0216010:CDS 40.0%
!! TCCAATTTCTGGTAACGAAG+TGG - chr2_1:61693676-61693695 Msa0216010:CDS 40.0%
TCCACTTCGTTACCAGAAAT+TGG + chr2_1:61693680-61693699 None:intergenic 40.0%
TGTGGAATTTGCAGCGATTA+GGG + chr2_1:61693753-61693772 None:intergenic 40.0%
TAATCGCTGCAAATTCCACA+GGG - chr2_1:61693753-61693772 Msa0216010:CDS 40.0%
! GAATGTCAAGATTCTGGAGA+TGG - chr2_1:61693775-61693794 Msa0216010:CDS 40.0%
! ATTCTGGAGATGGTTTGAGT+TGG - chr2_1:61693785-61693804 Msa0216010:CDS 40.0%
! GTTGTAGATAAAGTGCCACA+TGG - chr2_1:61694010-61694029 Msa0216010:CDS 40.0%
GGGAACTGATCAACATTACA+TGG + chr2_1:61694219-61694238 None:intergenic 40.0%
TTGGAGGATAAGGAATGGAA+TGG - chr2_1:61694340-61694359 Msa0216010:CDS 40.0%
TGGAGGATAAGGAATGGAAT+GGG - chr2_1:61694341-61694360 Msa0216010:CDS 40.0%
ACTGCAATTACTGTTGGTGT+TGG + chr2_1:61694396-61694415 None:intergenic 40.0%
!! GGACACCTCGAATTTTAATG+TGG - chr2_1:61694440-61694459 Msa0216010:five_prime_UTR 40.0%
ACGTCCCCTAGAGAAATAAT+TGG - chr2_1:61694515-61694534 Msa0216010:five_prime_UTR 40.0%
GATTCACCATAGTCCATAGT+TGG + chr2_1:61694596-61694615 None:intergenic 40.0%
! TCGGCAAACGTTCTTTGTTT+CGG + chr2_1:61694732-61694751 None:intergenic 40.0%
!! AAAGTTGGTGGAAGTGTGTT+CGG + chr2_1:61694751-61694770 None:intergenic 40.0%
AAATCAGCTGGAGGATTAGA+AGG + chr2_1:61694819-61694838 None:intergenic 40.0%
ATGACAGGTTTCAAATCAGC+TGG + chr2_1:61694831-61694850 None:intergenic 40.0%
TCTGACTTCATATCAGCAGA+AGG + chr2_1:61694873-61694892 None:intergenic 40.0%
!! ACTTTGATGATGTGTGGTGG+TGG - chr2_1:61689040-61689059 Msa0216010:CDS 45.0%
GAGTCTCAGATAGGAACCAA+AGG - chr2_1:61689562-61689581 Msa0216010:intron 45.0%
! CGGAGAAAGGATTTTCCCTT+TGG + chr2_1:61689581-61689600 None:intergenic 45.0%
GATTGGATTCATGGTGCACA+AGG - chr2_1:61689639-61689658 Msa0216010:intron 45.0%
!! AAACCTAGGTGGGTTTTGTG+AGG - chr2_1:61689674-61689693 Msa0216010:intron 45.0%
!! AACCTAGGTGGGTTTTGTGA+GGG - chr2_1:61689675-61689694 Msa0216010:intron 45.0%
GAGGCAATGGTTGGATAAAC+CGG - chr2_1:61689755-61689774 Msa0216010:intron 45.0%
GTTGGATAAACCGGATCGAT+CGG - chr2_1:61689764-61689783 Msa0216010:intron 45.0%
AAGAAATCCACCGATCGATC+CGG + chr2_1:61689777-61689796 None:intergenic 45.0%
GTTAATGCAGCACACTGTCA+AGG - chr2_1:61689834-61689853 Msa0216010:intron 45.0%
GAAAGACGACATGACAAAGC+AGG + chr2_1:61689886-61689905 None:intergenic 45.0%
GATGGAGTAAACAACGACCA+AGG - chr2_1:61689966-61689985 Msa0216010:intron 45.0%
TATGCCTGCCAAGATTTCGA+CGG - chr2_1:61690067-61690086 Msa0216010:intron 45.0%
TAGGAGGAAGGATGAAGAAG+TGG - chr2_1:61690184-61690203 Msa0216010:CDS 45.0%
AGGAAGGATGAAGAAGTGGA+AGG - chr2_1:61690188-61690207 Msa0216010:CDS 45.0%
TTGGTACACTAGTCCTGAAG+AGG - chr2_1:61690259-61690278 Msa0216010:CDS 45.0%
CGAAAAGGAGAATCCCCAAT+CGG + chr2_1:61690322-61690341 None:intergenic 45.0%
! ATTGGGGATTCTCCTTTTCG+AGG - chr2_1:61690322-61690341 Msa0216010:intron 45.0%
!! TTCGATACTCTGGCTCTGTT+TGG - chr2_1:61690389-61690408 Msa0216010:intron 45.0%
TTCTCTTCTCTTGAGCTCAG+TGG + chr2_1:61690762-61690781 None:intergenic 45.0%
! GGCCACTTTAGAAGTAACTG+TGG + chr2_1:61690825-61690844 None:intergenic 45.0%
! GAGATTGCTGGCGTTGAATT+AGG - chr2_1:61691598-61691617 Msa0216010:CDS 45.0%
CTCGCTATCAATGACTGTCA+TGG + chr2_1:61691656-61691675 None:intergenic 45.0%
!! CATGACAGTCATTGATAGCG+AGG - chr2_1:61691654-61691673 Msa0216010:CDS 45.0%
TGCAAACCATCCTATTCCTC+AGG - chr2_1:61691844-61691863 Msa0216010:CDS 45.0%
ATATGCGAATGTCTAACCCC+GGG + chr2_1:61691874-61691893 None:intergenic 45.0%
CATATGCGAATGTCTAACCC+CGG + chr2_1:61691875-61691894 None:intergenic 45.0%
CATATGGCAAATGTTGGGAG+AGG - chr2_1:61691889-61691908 Msa0216010:CDS 45.0%
!! TGGCTTTGAAAGACCAAGGA+AGG - chr2_1:61691950-61691969 Msa0216010:CDS 45.0%
!! GGCTTTGAAAGACCAAGGAA+GGG - chr2_1:61691951-61691970 Msa0216010:CDS 45.0%
TTGAAAGACCAAGGAAGGGA+CGG - chr2_1:61691955-61691974 Msa0216010:CDS 45.0%
GCAAAAGATCTCCTTGCTTC+AGG + chr2_1:61692059-61692078 None:intergenic 45.0%
ACTGAGTGAGCATACTAGGT+TGG + chr2_1:61692088-61692107 None:intergenic 45.0%
CGAAACTGAGTGAGCATACT+AGG + chr2_1:61692092-61692111 None:intergenic 45.0%
GGATCGTGATATCCACTATC+CGG - chr2_1:61692191-61692210 Msa0216010:CDS 45.0%
TGATATCCACTATCCGGTAG+TGG - chr2_1:61692197-61692216 Msa0216010:CDS 45.0%
TAGTTTACGGATACGTTGGC+AGG - chr2_1:61692380-61692399 Msa0216010:CDS 45.0%
! ATTTGTTAGAACAGCGACCC+CGG + chr2_1:61692601-61692620 None:intergenic 45.0%
ACGACGGTTCAGTTAAGCTA+TGG - chr2_1:61692757-61692776 Msa0216010:intron 45.0%
!! GATGAGTTGTTTCTCTCACC+TGG - chr2_1:61692889-61692908 Msa0216010:intron 45.0%
ATGCTGTGTTCAGTTTCCTC+TGG - chr2_1:61692963-61692982 Msa0216010:intron 45.0%
TCGATACCTCGCATTTGGTT+CGG - chr2_1:61692993-61693012 Msa0216010:CDS 45.0%
!! AAGCTTCAAAGTGTTGTCCG+TGG + chr2_1:61693142-61693161 None:intergenic 45.0%
!! CGGACAACACTTTGAAGCTT+TGG - chr2_1:61693142-61693161 Msa0216010:intron 45.0%
TTGTAATGCTGGCATAGGGA+AGG + chr2_1:61693636-61693655 None:intergenic 45.0%
! AGTTTGTCTCCTCGGTTTGT+TGG - chr2_1:61693711-61693730 Msa0216010:CDS 45.0%
GAATTTGCAGCGATTAGGGT+TGG + chr2_1:61693749-61693768 None:intergenic 45.0%
CTGTGGAATTTGCAGCGATT+AGG + chr2_1:61693754-61693773 None:intergenic 45.0%
CTAATCGCTGCAAATTCCAC+AGG - chr2_1:61693752-61693771 Msa0216010:CDS 45.0%
CAGAATCTTGACATTCCCTG+TGG + chr2_1:61693771-61693790 None:intergenic 45.0%
CACAGGGAATGTCAAGATTC+TGG - chr2_1:61693769-61693788 Msa0216010:CDS 45.0%
TACACAGTCCTTTCCCTACA+TGG - chr2_1:61694100-61694119 Msa0216010:CDS 45.0%
AGTAGCTTCCATGTAGGGAA+AGG + chr2_1:61694111-61694130 None:intergenic 45.0%
! ACAACACTGGTTGGAGGATA+AGG - chr2_1:61694330-61694349 Msa0216010:CDS 45.0%
ACTGGTTGGAGGATAAGGAA+TGG - chr2_1:61694335-61694354 Msa0216010:CDS 45.0%
TAGTGGCAGTAGGAAGACAA+TGG + chr2_1:61694546-61694565 None:intergenic 45.0%
ATTGTCTTCCTACTGCCACT+AGG - chr2_1:61694545-61694564 Msa0216010:five_prime_UTR 45.0%
TGTCAATTCCTAGTGGCAGT+AGG + chr2_1:61694556-61694575 None:intergenic 45.0%
ACAGGTTTCAAATCAGCTGG+AGG + chr2_1:61694828-61694847 None:intergenic 45.0%
GCAGAAGGATCCACAATTGA+AGG + chr2_1:61694858-61694877 None:intergenic 45.0%
!!! TTTAATTATATTTTTTAGTT+TGG - chr2_1:61689164-61689183 Msa0216010:intron 5.0%
!! ATTAAATAAAAAACAATAAA+GGG + chr2_1:61689239-61689258 None:intergenic 5.0%
!! TATTAAATAAAAAACAATAA+AGG + chr2_1:61689240-61689259 None:intergenic 5.0%
!!! TTTATTGTTTTTTATTTAAT+AGG - chr2_1:61689239-61689258 Msa0216010:intron 5.0%
GAAAATCCTTTCTCCGGCGA+GGG - chr2_1:61689585-61689604 Msa0216010:intron 50.0%
AGAATCTTGTGATCCCTCGC+CGG + chr2_1:61689601-61689620 None:intergenic 50.0%
GCGAGGGATCACAAGATTCT+AGG - chr2_1:61689601-61689620 Msa0216010:intron 50.0%
GACGACATGACAAAGCAGGA+AGG + chr2_1:61689882-61689901 None:intergenic 50.0%
GGAGTAAACAACGACCAAGG+AGG - chr2_1:61689969-61689988 Msa0216010:intron 50.0%
TCACGAGGACAGTGAGATGT+CGG + chr2_1:61690011-61690030 None:intergenic 50.0%
CCAAGATTTCGACGGATGCT+CGG - chr2_1:61690075-61690094 Msa0216010:intron 50.0%
ACTAGTCCTGAAGAGGTTGC+TGG - chr2_1:61690266-61690285 Msa0216010:intron 50.0%
! CTAGTGTTGGACGACTGCTA+GGG + chr2_1:61690887-61690906 None:intergenic 50.0%
CTAGCAGTCGTCCAACACTA+GGG - chr2_1:61690886-61690905 Msa0216010:CDS 50.0%
GGTCTTCCTGAGGAATAGGA+TGG + chr2_1:61691853-61691872 None:intergenic 50.0%
TCCTATTCCTCAGGAAGACC+CGG - chr2_1:61691853-61691872 Msa0216010:CDS 50.0%
CGGGGTTAGACATTCGCATA+TGG - chr2_1:61691873-61691892 Msa0216010:CDS 50.0%
GTTAAGGCTGACCTGAAGCA+AGG - chr2_1:61692045-61692064 Msa0216010:CDS 50.0%
TCACTCAGTTTCGACCGTGA+TGG - chr2_1:61692099-61692118 Msa0216010:CDS 50.0%
! GGAGAATTTTTCGCAACCGC+TGG - chr2_1:61692120-61692139 Msa0216010:CDS 50.0%
TCACGGAGTTAGCCCAATTG+TGG + chr2_1:61692527-61692546 None:intergenic 50.0%
GATCCAACAATGTTGGCGAG+TGG - chr2_1:61692729-61692748 Msa0216010:intron 50.0%
TCACCTGGGCTGTTATTGCA+GGG - chr2_1:61692904-61692923 Msa0216010:intron 50.0%
!! ACCAAATGCGAGGTATCGAG+CGG + chr2_1:61692992-61693011 None:intergenic 50.0%
!! CATTTGGTTCGGCAGATCAC+CGG - chr2_1:61693004-61693023 Msa0216010:CDS 50.0%
!! GTGCCGCTTTGCACTTTAGT+TGG - chr2_1:61693057-61693076 Msa0216010:CDS 50.0%
CAACCTTGTCTCTGCATCCA+CGG - chr2_1:61693122-61693141 Msa0216010:CDS 50.0%
!! TCGCCGATTCAATCGTTCAC+TGG - chr2_1:61693198-61693217 Msa0216010:intron 50.0%
AACCGAGGAGACAAACTGTG+CGG + chr2_1:61693708-61693727 None:intergenic 50.0%
GATGCTGTGCTAGACAACAC+TGG - chr2_1:61694317-61694336 Msa0216010:CDS 50.0%
CTGTGCTAGACAACACTGGT+TGG - chr2_1:61694321-61694340 Msa0216010:CDS 50.0%
! TGCTAGACAACACTGGTTGG+AGG - chr2_1:61694324-61694343 Msa0216010:CDS 50.0%
!! CTCTAGGGGACGTTTTTGAC+TGG + chr2_1:61694508-61694527 None:intergenic 50.0%
GGAAAATCCTTTCTCCGGCG+AGG - chr2_1:61689584-61689603 Msa0216010:intron 55.0%
CACCCTCACAAAACCCACCT+AGG + chr2_1:61689680-61689699 None:intergenic 55.0%
GGATAAACCGGATCGATCGG+TGG - chr2_1:61689767-61689786 Msa0216010:intron 55.0%
!! CAACGACCAAGGAGGTGTTG+AGG - chr2_1:61689977-61689996 Msa0216010:intron 55.0%
GCATCCGTCGAAATCTTGGC+AGG + chr2_1:61690074-61690093 None:intergenic 55.0%
CCGAGCATCCGTCGAAATCT+TGG + chr2_1:61690078-61690097 None:intergenic 55.0%
! GCTGTCAAGTGCTGTGTACG+CGG - chr2_1:61690115-61690134 Msa0216010:CDS 55.0%
! GGAGTACCAGCAACCTCTTC+AGG + chr2_1:61690275-61690294 None:intergenic 55.0%
! CCTAGTGTTGGACGACTGCT+AGG + chr2_1:61690888-61690907 None:intergenic 55.0%
CCTAGCAGTCGTCCAACACT+AGG - chr2_1:61690885-61690904 Msa0216010:CDS 55.0%
CCTATTCCTCAGGAAGACCC+GGG - chr2_1:61691854-61691873 Msa0216010:CDS 55.0%
CTATTCCTCAGGAAGACCCG+GGG - chr2_1:61691855-61691874 Msa0216010:CDS 55.0%
CCATCTCCACTACCGGATAG+TGG + chr2_1:61692206-61692225 None:intergenic 55.0%
!! CCACTATCCGGTAGTGGAGA+TGG - chr2_1:61692203-61692222 Msa0216010:CDS 55.0%
CTGCAAGCCATCTCCACTAC+CGG + chr2_1:61692213-61692232 None:intergenic 55.0%
! CTGAAATGAGGGAGCACGAG+CGG - chr2_1:61692676-61692695 Msa0216010:intron 55.0%
CTGCCACTCGCCAACATTGT+TGG + chr2_1:61692735-61692754 None:intergenic 55.0%
CTCACCTGGGCTGTTATTGC+AGG - chr2_1:61692903-61692922 Msa0216010:intron 55.0%
ACTCCCTGCAATAACAGCCC+AGG + chr2_1:61692910-61692929 None:intergenic 55.0%
!! AGGTATCGAGCGGAATCCAG+AGG + chr2_1:61692982-61693001 None:intergenic 55.0%
TCCGCTCGATACCTCGCATT+TGG - chr2_1:61692988-61693007 Msa0216010:intron 55.0%
GATCTGCCGAACCAAATGCG+AGG + chr2_1:61693002-61693021 None:intergenic 55.0%
TGTCCGTGGATGCAGAGACA+AGG + chr2_1:61693128-61693147 None:intergenic 55.0%
TGCCGCACAGTTTGTCTCCT+CGG - chr2_1:61693703-61693722 Msa0216010:CDS 55.0%
!! CTGTTGGTGTTGGCTATGCC+AGG + chr2_1:61694386-61694405 None:intergenic 55.0%
TGTGATCCCTCGCCGGAGAA+AGG + chr2_1:61689594-61689613 None:intergenic 60.0%
GTTGGACGACTGCTAGGGTC+AGG + chr2_1:61690882-61690901 None:intergenic 60.0%
CCCGGGTCTTCCTGAGGAAT+AGG + chr2_1:61691857-61691876 None:intergenic 60.0%
TCTAACCCCGGGTCTTCCTG+AGG + chr2_1:61691863-61691882 None:intergenic 60.0%
!! CGGTAGTGGAGATGGCTTGC+AGG - chr2_1:61692211-61692230 Msa0216010:CDS 60.0%
ACGTTGGCAGGTCGCTCAAG+TGG - chr2_1:61692392-61692411 Msa0216010:CDS 60.0%
CGTTGGCAGGTCGCTCAAGT+GGG - chr2_1:61692393-61692412 Msa0216010:CDS 60.0%
GTTGGCAGGTCGCTCAAGTG+GGG - chr2_1:61692394-61692413 Msa0216010:CDS 60.0%
TTGGCAGGTCGCTCAAGTGG+GGG - chr2_1:61692395-61692414 Msa0216010:CDS 60.0%
CTGGCATAGGGAAGGCCTTG+TGG + chr2_1:61693628-61693647 None:intergenic 60.0%
!! GTCTCCTCGGTTTGTTGGCG+TGG - chr2_1:61693716-61693735 Msa0216010:CDS 60.0%
CTGACCACGCCAACAAACCG+AGG + chr2_1:61693723-61693742 None:intergenic 60.0%
TCAGCGGGAGGATCCGCAAT+TGG + chr2_1:61694910-61694929 None:intergenic 60.0%
CACTTGCGCCGTCCCTTCCT+TGG + chr2_1:61691966-61691985 None:intergenic 65.0%
GAAGGGACGGCGCAAGTGCT+TGG - chr2_1:61691968-61691987 Msa0216010:CDS 65.0%
TTGGCGAGTGGCAGCGACGA+CGG - chr2_1:61692741-61692760 Msa0216010:intron 65.0%
GCGGGAGGATCCGCAATTGG+AGG + chr2_1:61694907-61694926 None:intergenic 65.0%
! GGGAGCACGAGCGGCGAGTG+TGG - chr2_1:61692685-61692704 Msa0216010:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 61688968 61694929 61688968 ID=Msa0216010;Name=Msa0216010
chr2_1 mRNA 61688968 61694929 61688968 ID=Msa0216010-mRNA-1;Parent=Msa0216010;Name=Msa0216010-mRNA-1;_AED=0.13;_eAED=0.13;_QI=356|0.66|0.6|0.8|0.88|0.8|10|0|960
chr2_1 exon 61688968 61689092 61688968 ID=Msa0216010-mRNA-1:exon:17043;Parent=Msa0216010-mRNA-1
chr2_1 exon 61689249 61689330 61689249 ID=Msa0216010-mRNA-1:exon:17042;Parent=Msa0216010-mRNA-1
chr2_1 exon 61690101 61690283 61690101 ID=Msa0216010-mRNA-1:exon:17041;Parent=Msa0216010-mRNA-1
chr2_1 exon 61690470 61690529 61690470 ID=Msa0216010-mRNA-1:exon:17040;Parent=Msa0216010-mRNA-1
chr2_1 exon 61690661 61690972 61690661 ID=Msa0216010-mRNA-1:exon:17039;Parent=Msa0216010-mRNA-1
chr2_1 exon 61691049 61691252 61691049 ID=Msa0216010-mRNA-1:exon:17038;Parent=Msa0216010-mRNA-1
chr2_1 exon 61691586 61692522 61691586 ID=Msa0216010-mRNA-1:exon:17037;Parent=Msa0216010-mRNA-1
chr2_1 exon 61692990 61693147 61692990 ID=Msa0216010-mRNA-1:exon:17036;Parent=Msa0216010-mRNA-1
chr2_1 exon 61693554 61694594 61693554 ID=Msa0216010-mRNA-1:exon:17035;Parent=Msa0216010-mRNA-1
chr2_1 exon 61694793 61694929 61694793 ID=Msa0216010-mRNA-1:exon:17034;Parent=Msa0216010-mRNA-1
chr2_1 five_prime_UTR 61694793 61694929 61694793 ID=Msa0216010-mRNA-1:five_prime_utr;Parent=Msa0216010-mRNA-1
chr2_1 five_prime_UTR 61694376 61694594 61694376 ID=Msa0216010-mRNA-1:five_prime_utr;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61693554 61694375 61693554 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61692990 61693147 61692990 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61691586 61692522 61691586 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61691049 61691252 61691049 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61690661 61690972 61690661 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61690470 61690529 61690470 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61690101 61690283 61690101 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61689249 61689330 61689249 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
chr2_1 CDS 61688968 61689092 61688968 ID=Msa0216010-mRNA-1:cds;Parent=Msa0216010-mRNA-1
Gene Sequence

>Msa0216010

ATGGAGAATTCTGAGAGTTCTAGGGCTTTGAATAGTTCTGGAGTCTCAGATAGGAACCAAAGGGAAAATCCTTTCTCCGGCGAGGGATCACAAGATTCTAGGTTTAGAAAGGAAAGGGATTGGATTCATGGTGCACAAGGTGATCAAAACAAAAACCTAGGTGGGTTTTGTGAGGGTGAAGAAGTAGAGAATGATCCTTTCTTTTGTTCAGTTGAATGGGGTGATATTAGTTTGAGGCAATGGTTGGATAAACCGGATCGATCGGTGGATTTCTTTGAATGCTTGCACGTATTTAGACAAATAGTTGAGATTGTTAATGCAGCACACTGTCAAGGTGTTGTTGTTCATAATGTGAGGCCTTCCTGCTTTGTCATGTCGTCTTTCAACCATATATCGTTTATTGAATCAGCTTCTTGTTCGGATACCAGCTCAGATTCTTTAGGAGATGGAGTAAACAACGACCAAGGAGGTGTTGAGGTTAAAACTCCGACATCTCACTGTCCTCGTGATATTATGCATCAGCAGAGTTTCGGAAGTGAAGATTTTATGCCTGCCAAGATTTCGACGGATGCTCGGTCTGATTCTAGTTGCATGCTGTCAAGTGCTGTGTACGCGGCTCGTGCGTCGTTAATAGAAGAAACAGAAGAAAATAAAATGAAAGATAGGAGGAAGGATGAAGAAGTGGAAGGTAAGAAGCAATCGTTTCCGATGAAACAGATACTTCTAATGGAGATGAGTTGGTACACTAGTCCTGAAGAGGTTGCTGGTACTCCTAGTTCATGTGCTTCAGATGTTTACCGATTGGGGATTCTCCTTTTCGAGCTATTCTGTCCACTGAGCTCAAGAGAAGAGAAAAGTAGAACAATGTCTAGTCTTAGACATAGAGTTCTTCCTCCACAGTTACTTCTAAAGTGGCCTAAGGAAGCTTCATTTTGCTTATGGTTACTACATCCTGACCCTAGCAGTCGTCCAACACTAGGGGAGTTGTTGCAGAGCGAGTTCCTCAACGAACAAAGAGATGATATGGAAGAACGTGAAGCAGCAATAGAGCTTAGACAAAAGATAGAAGATGAGGAGTTGTTGCTAGAATTCCTTTCATTACTTAAACAAAGAAAACAAGAAGTTGCTGAAAAGTTGCAACATACTATCTCTTTTCTATGTTCAGATATTGAAGAAGTGACCAAGAAGCAAACTAGATTTAAAGAGATTGCTGGCGTTGAATTAGGGAGTGACGACCGTTCAGCATCAACTTTTCCATCCATGACAGTCATTGATAGCGAGGATTCTGCTTGTCTAGTAACTAGAAAACGAGTCAGACTAGGGATGCATCTCGATGAATGTGATGATAACGTGGAGAGTGATCAGAAAAATCATGGAAGTTTTCTTTCAAAAAATTCGCGACTAATGAAAAACTTTAAGAAGCTCGAGTCAGCGTACTTTTTAACACGATGCAAACCATCCTATTCCTCAGGAAGACCCGGGGTTAGACATTCGCATATGGCAAATGTTGGGAGAGGGTCTGTCGTCATGAGTGAAAGAAGTTGCATCAATAACTTGGCTTTGAAAGACCAAGGAAGGGACGGCGCAAGTGCTTGGATAAATCCTTTTCTTGAGGGTTTGTGCAAGTACTTATCTTTCAGTAAGCTTAAAGTTAAGGCTGACCTGAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGTTTCGACCGTGATGGAGAATTTTTCGCAACCGCTGGTGTGAATAAGAAAATCAAAATATTTGAATGTGATACAATCATAAAAGAGGATCGTGATATCCACTATCCGGTAGTGGAGATGGCTTGCAGGTCAAAGCTGAGCAGTTTATGTTGGAATACATACATCAAAAGTCAAATTGCTTCAAGTAATTTTGAAGGTGTTGTACAGCTATGGGATGTTACAAGAAGCCAAATACTATCTGAAATGAGGGAGCACGAGCGGCGAGTGTGGTCGATTGACTTCTCATCAGCAGATCCAACAATGTTGGCGAGTGGCAGCGACGACGGTTCAGTTAAGCTATGGAGTATCAATCAGGCAAAATTCCATTTTTGCACTTGGTGGATGTCAGCTTTGAAAACTAAACGTACTGCAGGAGTTAGTATCGGTACCATCAAAACGAAGGCAAATGTATGCTGTGTTCAGTTTCCTCTGGATTCCGCTCGATACCTCGCATTTGGTTCGGCAGATCACCGGATATATTACTATGATCTACGCAACTTAAGAGTGCCGCTTTGCACTTTAGTTGGACATAATAAGACGGTGAGCTACATCAAGTTTGTCGACAATGTCAACCTTGTCTCTGCATCCACGGACAACACTTTGAAGCTTTGGGATTTGTCTACATGTACATCTCGAGTTATTGACTCGCCGATTCAATCGTTCACTGGTCACACAAATGTTAAGAATTTTGTGGGATTATCAGTATCTGATGGTTATATTGCTACTGGTTCAGAGACAAATGAGGTGTTCGTATACCACAAGGCCTTCCCTATGCCAGCATTACAATTCAAGTTTCAGAACACAGATCCAATTTCTGGTAACGAAGTGGACGATGCCGCACAGTTTGTCTCCTCGGTTTGTTGGCGTGGTCAGTCGCCAACCCTAATCGCTGCAAATTCCACAGGGAATGTCAAGATTCTGGAGATGGAATTGACAAAGAATCAAAATAATCACCAACTATGGACTATGGTGAATCTAAGTAACGAGAGCAAACCTCAGAAACAATTAGATATGGGTGTTCCTTCTAATCCTCCAGCTGATTTGAAACCTGTCATTACACCTTCAATTGTGGATCCTTCTGCTGATATGAAGTCAGACATTAATTGCACCTCCAATTGCGGATCCTCCCGCTGA
Protein sequence

>Msa0216010

MENSESSRALNSSGVSDRNQRENPFSGEGSQDSRFRKERDWIHGAQGDQNKNLGGFCEGEEVENDPFFCSVEWGDISLRQWLDKPDRSVDFFECLHVFRQIVEIVNAAHCQGVVVHNVRPSCFVMSSFNHISFIESASCSDTSSDSLGDGVNNDQGGVEVKTPTSHCPRDIMHQQSFGSEDFMPAKISTDARSDSSCMLSSAVYAARASLIEETEENKMKDRRKDEEVEGKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPTLGELLQSEFLNEQRDDMEEREAAIELRQKIEDEELLLEFLSLLKQRKQEVAEKLQHTISFLCSDIEEVTKKQTRFKEIAGVELGSDDRSASTFPSMTVIDSEDSACLVTRKRVRLGMHLDECDDNVESDQKNHGSFLSKNSRLMKNFKKLESAYFLTRCKPSYSSGRPGVRHSHMANVGRGSVVMSERSCINNLALKDQGRDGASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKEDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQAKFHFCTWWMSALKTKRTAGVSIGTIKTKANVCCVQFPLDSARYLAFGSADHRIYYYDLRNLRVPLCTLVGHNKTVSYIKFVDNVNLVSASTDNTLKLWDLSTCTSRVIDSPIQSFTGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPALQFKFQNTDPISGNEVDDAAQFVSSVCWRGQSPTLIAANSTGNVKILEMELTKNQNNHQLWTMVNLSNESKPQKQLDMGVPSNPPADLKPVITPSIVDPSADMKSDINCTSNCGSSR*