AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0301020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0301020 MtrunA17_Chr2g0326381 95.238 420 14 1 1 420 1 414 0.0 828
Msa0301020 MtrunA17_Chr4g0029521 53.117 401 143 13 1 373 1 384 4.35e-130 384
Msa0301020 MtrunA17_Chr1g0181381 79.167 192 38 2 18 208 24 214 9.55e-113 339
Msa0301020 MtrunA17_Chr7g0263941 63.985 261 72 9 8 253 12 265 2.35e-107 322
Msa0301020 MtrunA17_Chr1g0185121 76.087 184 44 0 31 214 39 222 4.81e-106 320
Msa0301020 MtrunA17_Chr8g0342421 77.540 187 35 2 15 195 39 224 2.42e-104 318
Msa0301020 MtrunA17_Chr4g0040571 54.723 307 96 10 19 308 19 299 2.03e-102 313
Msa0301020 MtrunA17_Chr1g0151351 70.918 196 49 1 10 205 27 214 3.99e-102 311
Msa0301020 MtrunA17_Chr2g0330171 81.928 166 29 1 31 196 45 209 5.78e-102 311
Msa0301020 MtrunA17_Chr8g0373541 73.889 180 46 1 16 195 17 195 1.29e-100 309
Msa0301020 MtrunA17_Chr1g0191991 81.988 161 28 1 31 191 62 221 2.97e-99 306
Msa0301020 MtrunA17_Chr1g0199101 80.368 163 31 1 32 194 47 208 3.45e-98 303
Msa0301020 MtrunA17_Chr1g0210821 80.124 161 31 1 35 195 47 206 6.57e-97 301
Msa0301020 MtrunA17_Chr1g0163001 79.268 164 33 1 32 195 43 205 1.62e-96 298
Msa0301020 MtrunA17_Chr7g0268961 79.355 155 31 1 42 196 32 185 8.46e-93 288
Msa0301020 MtrunA17_Chr3g0141431 70.520 173 50 1 18 189 7 179 1.03e-91 282
Msa0301020 MtrunA17_Chr2g0324991 81.818 132 23 1 43 174 3 133 1.02e-78 240
Msa0301020 MtrunA17_Chr8g0375521 61.538 156 59 1 32 186 27 182 1.63e-70 228
Msa0301020 MtrunA17_Chr6g0479921 60.123 163 63 2 25 186 22 183 7.28e-70 228
Msa0301020 MtrunA17_Chr3g0123941 35.057 174 97 5 37 203 113 277 1.11e-25 106
Msa0301020 MtrunA17_Chr2g0320341 35.484 155 87 3 41 182 224 378 1.30e-25 107
Msa0301020 MtrunA17_Chr1g0200421 35.099 151 87 4 46 185 236 386 2.51e-23 102
Msa0301020 MtrunA17_Chr8g0382121 30.693 202 124 6 40 225 104 305 3.00e-21 93.6
Msa0301020 MtrunA17_Chr5g0422571 38.571 140 76 4 55 185 108 246 1.19e-20 91.7
Msa0301020 MtrunA17_Chr4g0053341 33.908 174 101 7 23 185 48 218 6.85e-20 88.2
Msa0301020 MtrunA17_Chr4g0026521 33.333 159 95 4 48 199 118 272 7.18e-20 89.4
Msa0301020 MtrunA17_Chr8g0352011 36.691 139 79 4 55 185 173 310 1.30e-19 89.4
Msa0301020 MtrunA17_Chr1g0198651 35.211 142 80 4 55 185 109 249 3.24e-19 87.4
Msa0301020 MtrunA17_Chr7g0258011 34.932 146 86 4 48 185 176 320 3.53e-19 88.2
Msa0301020 MtrunA17_Chr2g0321291 35.616 146 85 4 48 185 133 277 5.07e-19 87.0
Msa0301020 MtrunA17_Chr1g0173841 35.971 139 80 4 55 185 222 359 1.32e-18 87.0
Msa0301020 MtrunA17_Chr2g0328921 34.247 146 87 4 48 185 138 282 2.98e-18 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0301020 AT3G45260.2 81.868 182 33 0 31 212 38 219 2.88e-110 332
Msa0301020 AT3G45260.1 81.868 182 33 0 31 212 38 219 2.88e-110 332
Msa0301020 AT5G03150.1 72.816 206 43 4 28 224 49 250 2.35e-106 323
Msa0301020 AT3G13810.6 83.529 170 28 0 26 195 45 214 1.16e-104 319
Msa0301020 AT3G13810.5 83.529 170 28 0 26 195 59 228 1.50e-104 319
Msa0301020 AT3G13810.4 83.529 170 28 0 26 195 64 233 1.60e-104 319
Msa0301020 AT3G13810.1 83.529 170 28 0 26 195 64 233 1.60e-104 319
Msa0301020 AT3G50700.1 77.083 192 35 4 4 195 14 196 1.98e-104 317
Msa0301020 AT1G55110.3 72.917 192 52 0 29 220 60 251 1.42e-102 312
Msa0301020 AT1G55110.1 72.917 192 52 0 29 220 60 251 1.42e-102 312
Msa0301020 AT1G55110.2 72.917 192 52 0 29 220 60 251 1.42e-102 312
Msa0301020 AT5G66730.1 83.537 164 26 1 32 195 32 194 2.74e-102 313
Msa0301020 AT5G60470.2 67.143 210 59 2 16 215 27 236 3.52e-102 311
Msa0301020 AT5G60470.3 67.143 210 59 2 16 215 23 232 3.55e-102 311
Msa0301020 AT1G03840.1 74.317 183 43 2 31 210 40 221 1.35e-100 309
Msa0301020 AT4G02670.2 79.167 168 35 0 32 199 55 222 1.53e-100 305
Msa0301020 AT4G02670.1 79.167 168 35 0 32 199 53 220 1.67e-100 305
Msa0301020 AT5G44160.1 67.136 213 51 4 31 243 36 229 1.78e-98 302
Msa0301020 AT1G14580.1 77.381 168 37 1 32 199 53 219 3.04e-98 301
Msa0301020 AT1G14580.2 77.381 168 37 1 32 199 53 219 3.04e-98 301
Msa0301020 AT1G14580.3 77.381 168 37 1 32 199 67 233 4.67e-98 301
Msa0301020 AT3G13810.3 87.582 153 19 0 43 195 68 220 2.52e-97 300
Msa0301020 AT3G13810.2 87.582 153 19 0 43 195 82 234 3.94e-97 300
Msa0301020 AT2G02080.1 72.727 176 47 1 24 199 46 220 5.28e-97 300
Msa0301020 AT2G02080.4 72.727 176 47 1 24 199 46 220 5.28e-97 300
Msa0301020 AT2G02080.5 72.727 176 47 1 24 199 46 220 5.28e-97 300
Msa0301020 AT2G02080.3 72.727 176 47 1 24 199 46 220 5.28e-97 300
Msa0301020 AT1G03840.2 73.224 183 43 3 31 210 40 219 5.86e-97 299
Msa0301020 AT2G02070.2 80.488 164 31 1 32 195 52 214 3.29e-96 300
Msa0301020 AT2G02070.1 80.488 164 31 1 32 195 52 214 3.29e-96 300
Msa0301020 AT5G60470.1 70.330 182 45 1 43 215 46 227 1.24e-94 291
Msa0301020 AT5G44160.2 66.832 202 48 4 42 243 8 190 6.30e-92 284
Msa0301020 AT2G02080.6 78.571 140 29 1 56 195 1 139 4.90e-83 261
Msa0301020 AT2G02080.2 78.571 140 29 1 56 195 1 139 4.90e-83 261
Msa0301020 AT1G25250.3 56.742 178 64 3 22 186 12 189 2.56e-70 227
Msa0301020 AT2G01940.1 47.867 211 90 2 27 217 39 249 3.61e-69 226
Msa0301020 AT1G68130.1 58.282 163 67 1 25 186 34 196 5.50e-69 224
Msa0301020 AT2G01940.3 47.170 212 91 3 27 217 39 250 1.16e-65 216
Msa0301020 AT1G25250.1 60.544 147 56 2 42 186 20 166 7.99e-65 212
Msa0301020 AT1G68130.2 60.000 110 43 1 78 186 1 110 5.02e-43 154
Msa0301020 AT1G25250.2 60.360 111 42 2 78 186 1 111 7.60e-43 152
Msa0301020 AT2G01940.2 44.375 160 69 2 78 217 1 160 1.11e-41 151
Msa0301020 AT1G34370.3 35.443 158 89 4 41 185 14 171 8.78e-24 100
Msa0301020 AT1G34370.2 35.443 158 89 4 41 185 224 381 2.31e-23 102
Msa0301020 AT1G34370.1 35.443 158 89 4 41 185 224 381 2.31e-23 102
Msa0301020 AT5G22890.1 31.282 195 107 6 20 201 181 361 3.71e-22 97.8
Msa0301020 AT1G13290.1 36.879 141 78 5 55 185 95 234 1.72e-19 89.0
Msa0301020 AT1G51220.1 31.765 170 98 5 48 209 165 324 4.08e-19 88.2
Msa0301020 AT1G08290.1 36.765 136 74 5 60 185 179 312 1.55e-18 86.7
Msa0301020 AT3G20880.1 33.562 146 88 4 48 185 243 387 1.79e-18 87.4
Msa0301020 AT3G57670.1 34.247 146 87 4 48 185 204 348 5.08e-18 85.5
Msa0301020 AT1G34790.1 35.616 146 85 4 48 185 132 276 1.75e-17 83.2

Find 90 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATTCCTCATGGTTTATT+TGG 0.044366 2_3:+56707475 Msa0301020:CDS
CTCTTAACTGAATTTGAATT+AGG 0.133306 2_3:-56706083 None:intergenic
GACTTGGACATCCTTGTAAT+TGG 0.246061 2_3:-56707792 None:intergenic
ATGATGAGGAATGTTATTAT+TGG 0.266493 2_3:-56707551 None:intergenic
TTTGGGCTTAATCTGGAATA+TGG 0.266635 2_3:+56707493 Msa0301020:CDS
TCTTAACTGAATTTGAATTA+GGG 0.289041 2_3:-56706082 None:intergenic
TGGTTTATTTGGGCTTAATC+TGG 0.289612 2_3:+56707486 Msa0301020:CDS
CAAAAGATTGTTTCCAAAGT+TGG 0.290116 2_3:-56707431 None:intergenic
GATGAGAATGCACTAGAATT+TGG 0.301804 2_3:-56707583 None:intergenic
AAGATTAGGGTTTGAGTTTG+AGG 0.302868 2_3:-56706054 None:intergenic
AACAACTTGCCTGGTGTTCC+TGG 0.316889 2_3:-56706119 None:intergenic
AAACCATGAGGAATATTTCT+TGG 0.325294 2_3:-56707469 None:intergenic
GAATTAGGGTTAGGAAGATT+AGG 0.332160 2_3:-56706068 None:intergenic
GTCGATGTAGCTGTAGGTTT+TGG 0.340159 2_3:-56706354 None:intergenic
ATATTCCTCATGGTTTATTT+GGG 0.341816 2_3:+56707476 Msa0301020:CDS
TGATGAGGAATGTTATTATT+GGG 0.351177 2_3:-56707550 None:intergenic
TTAGACTTAGTCCACACTTT+TGG 0.355942 2_3:+56707625 Msa0301020:CDS
AGAGCAATCACTTCTGAATC+TGG 0.369008 2_3:-56706262 None:intergenic
AGAGCTTTAGGAGACCTAAC+AGG 0.369422 2_3:+56706484 Msa0301020:CDS
GAAACAAGCTGGAGGTGATT+AGG 0.369571 2_3:+56706410 Msa0301020:CDS
AATTAGGGTTAGGAAGATTA+GGG 0.370819 2_3:-56706067 None:intergenic
CATGACCCTAGTAGAGCTTT+AGG 0.371731 2_3:+56706472 Msa0301020:CDS
CCCATGAATGTTTCTTGACC+TGG 0.371869 2_3:-56707520 None:intergenic
TTTGTTGTCATCAGTGATTT+TGG 0.378804 2_3:-56706289 None:intergenic
TGGTGCACGCAGCTCTTCTC+TGG 0.394181 2_3:-56706451 None:intergenic
CACAGAAGGCTCTGTGAGTT+AGG 0.397082 2_3:-56707357 None:intergenic
ACTGAATTTGAATTAGGGTT+AGG 0.405640 2_3:-56706077 None:intergenic
CAGAGCCTTCTGTGAATCCT+TGG 0.414644 2_3:+56707366 Msa0301020:CDS
AATATGCAGTTCAATCTGAT+TGG 0.433651 2_3:+56706572 Msa0301020:CDS
TTTCTTTGCTTAAGCTTCCA+TGG 0.433993 2_3:-56706391 None:intergenic
ACGAACTTGCAAAGTGAGTT+TGG 0.438218 2_3:+56708048 Msa0301020:CDS
TGCAAACTTCGCACATGAAA+CGG 0.446537 2_3:-56706312 None:intergenic
ACGAGAGATTTCCTTGGTGT+TGG 0.446714 2_3:+56707955 Msa0301020:CDS
CCAGCAGTTATATCCAACTT+TGG 0.449389 2_3:+56707418 Msa0301020:CDS
AAGTTCGTGACAGATTCTAT+TGG 0.449453 2_3:-56708033 None:intergenic
AGGTCTCCTAAAGCTCTACT+AGG 0.450218 2_3:-56706478 None:intergenic
CCAAAGTTGGATATAACTGC+TGG 0.453656 2_3:-56707418 None:intergenic
ATCAATGGTAATAATGATGC+TGG 0.454395 2_3:+56707850 Msa0301020:CDS
TCTAGTGCATTCTCATCATC+AGG 0.456066 2_3:+56707589 Msa0301020:CDS
GAAACATCATTTACAAGTAG+TGG 0.476541 2_3:+56707700 Msa0301020:CDS
AAACATCATTTACAAGTAGT+GGG 0.483248 2_3:+56707701 Msa0301020:CDS
AAAGATGATGTCTGAAGAAG+CGG 0.506812 2_3:+56706004 None:intergenic
TAATTCATCCATTGTCCTTG+TGG 0.512587 2_3:-56707655 None:intergenic
CTTCATTGAAATTTCCTGCA+TGG 0.515978 2_3:-56707918 None:intergenic
GAAAGCACGGTGAGAAGAAG+TGG 0.517455 2_3:+56706527 Msa0301020:CDS
ACCAGGTCAAGAAACATTCA+TGG 0.517527 2_3:+56707519 Msa0301020:CDS
ACAACTACAAAGCTTATCAA+TGG 0.529480 2_3:+56707835 Msa0301020:CDS
TGCATTGTTGACACGTGACT+TGG 0.529889 2_3:-56707808 None:intergenic
AAGGCTCATAGTAAGATTTG+TGG 0.535441 2_3:+56706595 Msa0301020:CDS
GTGGAAGGAAGTGCAAGAAT+AGG 0.537491 2_3:+56707388 Msa0301020:CDS
TATTCTCAGAACCAATTACA+AGG 0.538162 2_3:+56707781 Msa0301020:CDS
GCTGGAGGTGATTAGGAAGA+AGG 0.538892 2_3:+56706417 Msa0301020:CDS
ATGTGCGAAGTTTGCAACAA+GGG 0.539035 2_3:+56706319 Msa0301020:CDS
TGCAGTTCAATCTGATTGGA+AGG 0.545468 2_3:+56706576 Msa0301020:CDS
GCTTAAGCAAAGAAACAAGC+TGG 0.547884 2_3:+56706399 Msa0301020:CDS
GTTTGAGGTGCCTCTGAAGT+TGG 0.548806 2_3:-56706039 None:intergenic
TTCAACCAATGTAACCATGC+AGG 0.550853 2_3:+56707904 Msa0301020:CDS
GCACCAAGAAATATTCCTCA+TGG 0.553675 2_3:+56707466 Msa0301020:CDS
GTTTATTACCACAAGGACAA+TGG 0.558273 2_3:+56707647 Msa0301020:CDS
CTAAAGCTCTACTAGGGTCA+TGG 0.559412 2_3:-56706471 None:intergenic
TTCTGTGAATCCTTGGTGGA+AGG 0.562391 2_3:+56707373 Msa0301020:CDS
GACGAGGACACAATCTTCCA+TGG 0.563267 2_3:+56706374 Msa0301020:CDS
ATTGTGGCACACTATTCTCC+AGG 0.563269 2_3:+56706638 Msa0301020:CDS
AGCCTTCTGTGAATCCTTGG+TGG 0.572662 2_3:+56707369 Msa0301020:CDS
TCTGATACTTCCAACTTCAG+AGG 0.574676 2_3:+56706029 Msa0301020:CDS
AGAAGTCTACCAGGAACACC+AGG 0.578443 2_3:+56706110 Msa0301020:CDS
CATGTGCGAAGTTTGCAACA+AGG 0.579589 2_3:+56706318 Msa0301020:CDS
AGTTTAACGAGAGATTTCCT+TGG 0.583180 2_3:+56707949 Msa0301020:CDS
AATTTCCTGCATGGTTACAT+TGG 0.586685 2_3:-56707909 None:intergenic
AATCTGGAATATGGTGGACC+AGG 0.589300 2_3:+56707502 Msa0301020:CDS
TTCCACCAAGGATTCACAGA+AGG 0.597334 2_3:-56707371 None:intergenic
GATTCTATTGGATTGAACCT+AGG 0.597877 2_3:-56708021 None:intergenic
GTCCTCGTCGATGTAGCTGT+AGG 0.600070 2_3:-56706360 None:intergenic
GGGCTTAATCTGGAATATGG+TGG 0.604589 2_3:+56707496 Msa0301020:CDS
TATCATCTCTTGTTGCAACA+AGG 0.605854 2_3:-56707998 None:intergenic
TTTGGAAGATAACTATGATG+AGG 0.609010 2_3:-56707565 None:intergenic
AACTTGCAAAGTGAGTTTGG+TGG 0.611112 2_3:+56708051 Msa0301020:CDS
GGTCTCCTAAAGCTCTACTA+GGG 0.614831 2_3:-56706477 None:intergenic
GAGCTTTAGGAGACCTAACA+GGG 0.617009 2_3:+56706485 Msa0301020:CDS
AAAGAGTACAGATGTGATTG+TGG 0.617310 2_3:+56706622 Msa0301020:CDS
CCAGGTCAAGAAACATTCAT+GGG 0.622229 2_3:+56707520 Msa0301020:CDS
AAGCACTTTAGTAGAAAGCA+CGG 0.627488 2_3:+56706514 Msa0301020:CDS
GTGGTAATAAACCAAAAGTG+TGG 0.631454 2_3:-56707636 None:intergenic
AACATCATTTACAAGTAGTG+GGG 0.641231 2_3:+56707702 Msa0301020:CDS
TCTTGCACTTCCTTCCACCA+AGG 0.653269 2_3:-56707383 None:intergenic
TGCAACAAGAGATGATACCT+AGG 0.687869 2_3:+56708004 Msa0301020:CDS
ATGAGTCATCTCCAACACCA+AGG 0.689337 2_3:-56707966 None:intergenic
TTAAGCCCAAATAAACCATG+AGG 0.695340 2_3:-56707481 None:intergenic
TAAGCAAAGAAACAAGCTGG+AGG 0.718484 2_3:+56706402 Msa0301020:CDS
AACCTACAGCTACATCGACG+AGG 0.721645 2_3:+56706358 Msa0301020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTATTTGTTAATTAAGA+AGG - chr2_3:56706228-56706247 None:intergenic 10.0%
!!! TATTTATTTGTTAATTAAGA+AGG - chr2_3:56706228-56706247 None:intergenic 10.0%
!!! AATTTAATCACAGATTTTTT+CGG + chr2_3:56707103-56707122 Msa0301020:intron 15.0%
!! ACAAAAAATAATTAACAAAG+TGG - chr2_3:56707306-56707325 None:intergenic 15.0%
!!! AATTTAATCACAGATTTTTT+CGG + chr2_3:56707103-56707122 Msa0301020:intron 15.0%
!! ACAAAAAATAATTAACAAAG+TGG - chr2_3:56707306-56707325 None:intergenic 15.0%
!! TCTTAACTGAATTTGAATTA+GGG - chr2_3:56706085-56706104 None:intergenic 20.0%
!! ATATTTACATAGACAAAAGA+AGG - chr2_3:56706147-56706166 None:intergenic 20.0%
!!! TAAAGTTTGTTATGAATTCA+CGG + chr2_3:56706704-56706723 Msa0301020:intron 20.0%
!! ATATTAAACATCCGTATATT+TGG + chr2_3:56706798-56706817 Msa0301020:intron 20.0%
!!! TGTTGTTATTTCCAAATATA+CGG - chr2_3:56706812-56706831 None:intergenic 20.0%
!!! AATAATTTTGAGAGTATGAT+AGG + chr2_3:56707279-56707298 Msa0301020:intron 20.0%
!! TCTTAACTGAATTTGAATTA+GGG - chr2_3:56706085-56706104 None:intergenic 20.0%
!! ATATTTACATAGACAAAAGA+AGG - chr2_3:56706147-56706166 None:intergenic 20.0%
!!! TAAAGTTTGTTATGAATTCA+CGG + chr2_3:56706704-56706723 Msa0301020:intron 20.0%
!! ATATTAAACATCCGTATATT+TGG + chr2_3:56706798-56706817 Msa0301020:intron 20.0%
!!! TGTTGTTATTTCCAAATATA+CGG - chr2_3:56706812-56706831 None:intergenic 20.0%
!!! AATAATTTTGAGAGTATGAT+AGG + chr2_3:56707279-56707298 Msa0301020:intron 20.0%
! CTCTTAACTGAATTTGAATT+AGG - chr2_3:56706086-56706105 None:intergenic 25.0%
!! TAGCTTTTACAGAATCAAAA+TGG - chr2_3:56706734-56706753 None:intergenic 25.0%
! AATATTCCTCATGGTTTATT+TGG + chr2_3:56707475-56707494 Msa0301020:CDS 25.0%
! ATATTCCTCATGGTTTATTT+GGG + chr2_3:56707476-56707495 Msa0301020:CDS 25.0%
! TGATGAGGAATGTTATTATT+GGG - chr2_3:56707553-56707572 None:intergenic 25.0%
! ATGATGAGGAATGTTATTAT+TGG - chr2_3:56707554-56707573 None:intergenic 25.0%
! AAACATCATTTACAAGTAGT+GGG + chr2_3:56707701-56707720 Msa0301020:CDS 25.0%
! CTCTTAACTGAATTTGAATT+AGG - chr2_3:56706086-56706105 None:intergenic 25.0%
!! TAGCTTTTACAGAATCAAAA+TGG - chr2_3:56706734-56706753 None:intergenic 25.0%
! AATATTCCTCATGGTTTATT+TGG + chr2_3:56707475-56707494 Msa0301020:CDS 25.0%
! ATATTCCTCATGGTTTATTT+GGG + chr2_3:56707476-56707495 Msa0301020:CDS 25.0%
! TGATGAGGAATGTTATTATT+GGG - chr2_3:56707553-56707572 None:intergenic 25.0%
! ATGATGAGGAATGTTATTAT+TGG - chr2_3:56707554-56707573 None:intergenic 25.0%
! AAACATCATTTACAAGTAGT+GGG + chr2_3:56707701-56707720 Msa0301020:CDS 25.0%
AATTAGGGTTAGGAAGATTA+GGG - chr2_3:56706070-56706089 None:intergenic 30.0%
ACTGAATTTGAATTAGGGTT+AGG - chr2_3:56706080-56706099 None:intergenic 30.0%
!! TTTGTTGTCATCAGTGATTT+TGG - chr2_3:56706292-56706311 None:intergenic 30.0%
AATATGCAGTTCAATCTGAT+TGG + chr2_3:56706572-56706591 Msa0301020:CDS 30.0%
TTTGTAACTTCGACAAAATC+AGG + chr2_3:56706759-56706778 Msa0301020:intron 30.0%
TTGTAACTTCGACAAAATCA+GGG + chr2_3:56706760-56706779 Msa0301020:intron 30.0%
GATCTAAACATGCATTTAAG+AGG + chr2_3:56706879-56706898 Msa0301020:intron 30.0%
TCTACTACACGATTTAATCA+GGG + chr2_3:56706902-56706921 Msa0301020:intron 30.0%
TCTCATTCCAATTAATGAAG+TGG + chr2_3:56707024-56707043 Msa0301020:intron 30.0%
CTCATTCCAATTAATGAAGT+GGG + chr2_3:56707025-56707044 Msa0301020:intron 30.0%
TCTAATCCCACTTCATTAAT+TGG - chr2_3:56707034-56707053 None:intergenic 30.0%
TAAGCATGAGATTAATGCAA+AGG - chr2_3:56707080-56707099 None:intergenic 30.0%
TGTATGATGATTGACAAATC+AGG + chr2_3:56707323-56707342 Msa0301020:intron 30.0%
CAAAAGATTGTTTCCAAAGT+TGG - chr2_3:56707434-56707453 None:intergenic 30.0%
AAACCATGAGGAATATTTCT+TGG - chr2_3:56707472-56707491 None:intergenic 30.0%
TTTGGAAGATAACTATGATG+AGG - chr2_3:56707568-56707587 None:intergenic 30.0%
!!! ACTTTTGGTTTATTACCACA+AGG + chr2_3:56707640-56707659 Msa0301020:CDS 30.0%
GAAACATCATTTACAAGTAG+TGG + chr2_3:56707700-56707719 Msa0301020:CDS 30.0%
AACATCATTTACAAGTAGTG+GGG + chr2_3:56707702-56707721 Msa0301020:CDS 30.0%
TATTCTCAGAACCAATTACA+AGG + chr2_3:56707781-56707800 Msa0301020:CDS 30.0%
ACAACTACAAAGCTTATCAA+TGG + chr2_3:56707835-56707854 Msa0301020:CDS 30.0%
ATCAATGGTAATAATGATGC+TGG + chr2_3:56707850-56707869 Msa0301020:CDS 30.0%
AATTAGGGTTAGGAAGATTA+GGG - chr2_3:56706070-56706089 None:intergenic 30.0%
ACTGAATTTGAATTAGGGTT+AGG - chr2_3:56706080-56706099 None:intergenic 30.0%
!! TTTGTTGTCATCAGTGATTT+TGG - chr2_3:56706292-56706311 None:intergenic 30.0%
AATATGCAGTTCAATCTGAT+TGG + chr2_3:56706572-56706591 Msa0301020:CDS 30.0%
TTTGTAACTTCGACAAAATC+AGG + chr2_3:56706759-56706778 Msa0301020:intron 30.0%
TTGTAACTTCGACAAAATCA+GGG + chr2_3:56706760-56706779 Msa0301020:intron 30.0%
GATCTAAACATGCATTTAAG+AGG + chr2_3:56706879-56706898 Msa0301020:intron 30.0%
TCTACTACACGATTTAATCA+GGG + chr2_3:56706902-56706921 Msa0301020:intron 30.0%
TCTCATTCCAATTAATGAAG+TGG + chr2_3:56707024-56707043 Msa0301020:intron 30.0%
CTCATTCCAATTAATGAAGT+GGG + chr2_3:56707025-56707044 Msa0301020:intron 30.0%
TCTAATCCCACTTCATTAAT+TGG - chr2_3:56707034-56707053 None:intergenic 30.0%
TAAGCATGAGATTAATGCAA+AGG - chr2_3:56707080-56707099 None:intergenic 30.0%
TGTATGATGATTGACAAATC+AGG + chr2_3:56707323-56707342 Msa0301020:intron 30.0%
CAAAAGATTGTTTCCAAAGT+TGG - chr2_3:56707434-56707453 None:intergenic 30.0%
AAACCATGAGGAATATTTCT+TGG - chr2_3:56707472-56707491 None:intergenic 30.0%
TTTGGAAGATAACTATGATG+AGG - chr2_3:56707568-56707587 None:intergenic 30.0%
!!! ACTTTTGGTTTATTACCACA+AGG + chr2_3:56707640-56707659 Msa0301020:CDS 30.0%
GAAACATCATTTACAAGTAG+TGG + chr2_3:56707700-56707719 Msa0301020:CDS 30.0%
AACATCATTTACAAGTAGTG+GGG + chr2_3:56707702-56707721 Msa0301020:CDS 30.0%
TATTCTCAGAACCAATTACA+AGG + chr2_3:56707781-56707800 Msa0301020:CDS 30.0%
ACAACTACAAAGCTTATCAA+TGG + chr2_3:56707835-56707854 Msa0301020:CDS 30.0%
ATCAATGGTAATAATGATGC+TGG + chr2_3:56707850-56707869 Msa0301020:CDS 30.0%
! AAGATTAGGGTTTGAGTTTG+AGG - chr2_3:56706057-56706076 None:intergenic 35.0%
GAATTAGGGTTAGGAAGATT+AGG - chr2_3:56706071-56706090 None:intergenic 35.0%
AAGAGAAAAAGAAGTCTACC+AGG + chr2_3:56706101-56706120 Msa0301020:CDS 35.0%
TTTCTTTGCTTAAGCTTCCA+TGG - chr2_3:56706394-56706413 None:intergenic 35.0%
!!! AGTGCTTTTTTATCCCTGTT+AGG - chr2_3:56706501-56706520 None:intergenic 35.0%
AAGCACTTTAGTAGAAAGCA+CGG + chr2_3:56706514-56706533 Msa0301020:CDS 35.0%
AAGGCTCATAGTAAGATTTG+TGG + chr2_3:56706595-56706614 Msa0301020:CDS 35.0%
! AAAGAGTACAGATGTGATTG+TGG + chr2_3:56706622-56706641 Msa0301020:CDS 35.0%
CGGATGTTTAATATAACCGT+CGG - chr2_3:56706792-56706811 None:intergenic 35.0%
GTCTACTACACGATTTAATC+AGG + chr2_3:56706901-56706920 Msa0301020:intron 35.0%
GATCTAAACATGCACTTAAG+AGG + chr2_3:56706943-56706962 Msa0301020:intron 35.0%
GAGTTTACTGTACAGAATCA+CGG - chr2_3:56707242-56707261 None:intergenic 35.0%
TTAAGCCCAAATAAACCATG+AGG - chr2_3:56707484-56707503 None:intergenic 35.0%
TGGTTTATTTGGGCTTAATC+TGG + chr2_3:56707486-56707505 Msa0301020:CDS 35.0%
! TTTGGGCTTAATCTGGAATA+TGG + chr2_3:56707493-56707512 Msa0301020:CDS 35.0%
GATGAGAATGCACTAGAATT+TGG - chr2_3:56707586-56707605 None:intergenic 35.0%
! TTAGACTTAGTCCACACTTT+TGG + chr2_3:56707625-56707644 Msa0301020:CDS 35.0%
GTGGTAATAAACCAAAAGTG+TGG - chr2_3:56707639-56707658 None:intergenic 35.0%
GTTTATTACCACAAGGACAA+TGG + chr2_3:56707647-56707666 Msa0301020:CDS 35.0%
TAATTCATCCATTGTCCTTG+TGG - chr2_3:56707658-56707677 None:intergenic 35.0%
AATTTCCTGCATGGTTACAT+TGG - chr2_3:56707912-56707931 None:intergenic 35.0%
CTTCATTGAAATTTCCTGCA+TGG - chr2_3:56707921-56707940 None:intergenic 35.0%
AGTTTAACGAGAGATTTCCT+TGG + chr2_3:56707949-56707968 Msa0301020:CDS 35.0%
TATCATCTCTTGTTGCAACA+AGG - chr2_3:56708001-56708020 None:intergenic 35.0%
GATTCTATTGGATTGAACCT+AGG - chr2_3:56708024-56708043 None:intergenic 35.0%
AAGTTCGTGACAGATTCTAT+TGG - chr2_3:56708036-56708055 None:intergenic 35.0%
! AAGATTAGGGTTTGAGTTTG+AGG - chr2_3:56706057-56706076 None:intergenic 35.0%
GAATTAGGGTTAGGAAGATT+AGG - chr2_3:56706071-56706090 None:intergenic 35.0%
AAGAGAAAAAGAAGTCTACC+AGG + chr2_3:56706101-56706120 Msa0301020:CDS 35.0%
TTTCTTTGCTTAAGCTTCCA+TGG - chr2_3:56706394-56706413 None:intergenic 35.0%
!!! AGTGCTTTTTTATCCCTGTT+AGG - chr2_3:56706501-56706520 None:intergenic 35.0%
AAGCACTTTAGTAGAAAGCA+CGG + chr2_3:56706514-56706533 Msa0301020:CDS 35.0%
AAGGCTCATAGTAAGATTTG+TGG + chr2_3:56706595-56706614 Msa0301020:CDS 35.0%
! AAAGAGTACAGATGTGATTG+TGG + chr2_3:56706622-56706641 Msa0301020:CDS 35.0%
CGGATGTTTAATATAACCGT+CGG - chr2_3:56706792-56706811 None:intergenic 35.0%
GTCTACTACACGATTTAATC+AGG + chr2_3:56706901-56706920 Msa0301020:intron 35.0%
GATCTAAACATGCACTTAAG+AGG + chr2_3:56706943-56706962 Msa0301020:intron 35.0%
GAGTTTACTGTACAGAATCA+CGG - chr2_3:56707242-56707261 None:intergenic 35.0%
TTAAGCCCAAATAAACCATG+AGG - chr2_3:56707484-56707503 None:intergenic 35.0%
TGGTTTATTTGGGCTTAATC+TGG + chr2_3:56707486-56707505 Msa0301020:CDS 35.0%
! TTTGGGCTTAATCTGGAATA+TGG + chr2_3:56707493-56707512 Msa0301020:CDS 35.0%
GATGAGAATGCACTAGAATT+TGG - chr2_3:56707586-56707605 None:intergenic 35.0%
! TTAGACTTAGTCCACACTTT+TGG + chr2_3:56707625-56707644 Msa0301020:CDS 35.0%
GTGGTAATAAACCAAAAGTG+TGG - chr2_3:56707639-56707658 None:intergenic 35.0%
GTTTATTACCACAAGGACAA+TGG + chr2_3:56707647-56707666 Msa0301020:CDS 35.0%
TAATTCATCCATTGTCCTTG+TGG - chr2_3:56707658-56707677 None:intergenic 35.0%
AATTTCCTGCATGGTTACAT+TGG - chr2_3:56707912-56707931 None:intergenic 35.0%
CTTCATTGAAATTTCCTGCA+TGG - chr2_3:56707921-56707940 None:intergenic 35.0%
AGTTTAACGAGAGATTTCCT+TGG + chr2_3:56707949-56707968 Msa0301020:CDS 35.0%
TATCATCTCTTGTTGCAACA+AGG - chr2_3:56708001-56708020 None:intergenic 35.0%
GATTCTATTGGATTGAACCT+AGG - chr2_3:56708024-56708043 None:intergenic 35.0%
AAGTTCGTGACAGATTCTAT+TGG - chr2_3:56708036-56708055 None:intergenic 35.0%
TCTGATACTTCCAACTTCAG+AGG + chr2_3:56706029-56706048 Msa0301020:CDS 40.0%
AGAGCAATCACTTCTGAATC+TGG - chr2_3:56706265-56706284 None:intergenic 40.0%
TGCAAACTTCGCACATGAAA+CGG - chr2_3:56706315-56706334 None:intergenic 40.0%
ATGTGCGAAGTTTGCAACAA+GGG + chr2_3:56706319-56706338 Msa0301020:CDS 40.0%
GCTTAAGCAAAGAAACAAGC+TGG + chr2_3:56706399-56706418 Msa0301020:CDS 40.0%
TAAGCAAAGAAACAAGCTGG+AGG + chr2_3:56706402-56706421 Msa0301020:CDS 40.0%
TGCAGTTCAATCTGATTGGA+AGG + chr2_3:56706576-56706595 Msa0301020:CDS 40.0%
CCAAAGTTGGATATAACTGC+TGG - chr2_3:56707421-56707440 None:intergenic 40.0%
CCAGCAGTTATATCCAACTT+TGG + chr2_3:56707418-56707437 Msa0301020:CDS 40.0%
GCACCAAGAAATATTCCTCA+TGG + chr2_3:56707466-56707485 Msa0301020:CDS 40.0%
ACCAGGTCAAGAAACATTCA+TGG + chr2_3:56707519-56707538 Msa0301020:CDS 40.0%
CCAGGTCAAGAAACATTCAT+GGG + chr2_3:56707520-56707539 Msa0301020:CDS 40.0%
TCTAGTGCATTCTCATCATC+AGG + chr2_3:56707589-56707608 Msa0301020:CDS 40.0%
GACTTGGACATCCTTGTAAT+TGG - chr2_3:56707795-56707814 None:intergenic 40.0%
TTCAACCAATGTAACCATGC+AGG + chr2_3:56707904-56707923 Msa0301020:CDS 40.0%
TGCAACAAGAGATGATACCT+AGG + chr2_3:56708004-56708023 Msa0301020:CDS 40.0%
ACGAACTTGCAAAGTGAGTT+TGG + chr2_3:56708048-56708067 Msa0301020:CDS 40.0%
AACTTGCAAAGTGAGTTTGG+TGG + chr2_3:56708051-56708070 Msa0301020:CDS 40.0%
TCTGATACTTCCAACTTCAG+AGG + chr2_3:56706029-56706048 Msa0301020:CDS 40.0%
AGAGCAATCACTTCTGAATC+TGG - chr2_3:56706265-56706284 None:intergenic 40.0%
TGCAAACTTCGCACATGAAA+CGG - chr2_3:56706315-56706334 None:intergenic 40.0%
ATGTGCGAAGTTTGCAACAA+GGG + chr2_3:56706319-56706338 Msa0301020:CDS 40.0%
GCTTAAGCAAAGAAACAAGC+TGG + chr2_3:56706399-56706418 Msa0301020:CDS 40.0%
TAAGCAAAGAAACAAGCTGG+AGG + chr2_3:56706402-56706421 Msa0301020:CDS 40.0%
TGCAGTTCAATCTGATTGGA+AGG + chr2_3:56706576-56706595 Msa0301020:CDS 40.0%
CCAAAGTTGGATATAACTGC+TGG - chr2_3:56707421-56707440 None:intergenic 40.0%
CCAGCAGTTATATCCAACTT+TGG + chr2_3:56707418-56707437 Msa0301020:CDS 40.0%
GCACCAAGAAATATTCCTCA+TGG + chr2_3:56707466-56707485 Msa0301020:CDS 40.0%
ACCAGGTCAAGAAACATTCA+TGG + chr2_3:56707519-56707538 Msa0301020:CDS 40.0%
CCAGGTCAAGAAACATTCAT+GGG + chr2_3:56707520-56707539 Msa0301020:CDS 40.0%
TCTAGTGCATTCTCATCATC+AGG + chr2_3:56707589-56707608 Msa0301020:CDS 40.0%
GACTTGGACATCCTTGTAAT+TGG - chr2_3:56707795-56707814 None:intergenic 40.0%
TTCAACCAATGTAACCATGC+AGG + chr2_3:56707904-56707923 Msa0301020:CDS 40.0%
TGCAACAAGAGATGATACCT+AGG + chr2_3:56708004-56708023 Msa0301020:CDS 40.0%
ACGAACTTGCAAAGTGAGTT+TGG + chr2_3:56708048-56708067 Msa0301020:CDS 40.0%
AACTTGCAAAGTGAGTTTGG+TGG + chr2_3:56708051-56708070 Msa0301020:CDS 40.0%
AAGAAGGTGAACAACTTGCC+TGG - chr2_3:56706131-56706150 None:intergenic 45.0%
CATGTGCGAAGTTTGCAACA+AGG + chr2_3:56706318-56706337 Msa0301020:CDS 45.0%
! GTCGATGTAGCTGTAGGTTT+TGG - chr2_3:56706357-56706376 None:intergenic 45.0%
GAAACAAGCTGGAGGTGATT+AGG + chr2_3:56706410-56706429 Msa0301020:CDS 45.0%
CTAAAGCTCTACTAGGGTCA+TGG - chr2_3:56706474-56706493 None:intergenic 45.0%
CATGACCCTAGTAGAGCTTT+AGG + chr2_3:56706472-56706491 Msa0301020:CDS 45.0%
GGTCTCCTAAAGCTCTACTA+GGG - chr2_3:56706480-56706499 None:intergenic 45.0%
AGGTCTCCTAAAGCTCTACT+AGG - chr2_3:56706481-56706500 None:intergenic 45.0%
!! AGAGCTTTAGGAGACCTAAC+AGG + chr2_3:56706484-56706503 Msa0301020:CDS 45.0%
!! GAGCTTTAGGAGACCTAACA+GGG + chr2_3:56706485-56706504 Msa0301020:CDS 45.0%
ATTGTGGCACACTATTCTCC+AGG + chr2_3:56706638-56706657 Msa0301020:CDS 45.0%
GTGCATCATGCTTGTATACC+TGG - chr2_3:56706659-56706678 None:intergenic 45.0%
! AAAATCAGGGTGTCAACCGA+CGG + chr2_3:56706773-56706792 Msa0301020:intron 45.0%
TTCCACCAAGGATTCACAGA+AGG - chr2_3:56707374-56707393 None:intergenic 45.0%
TTCTGTGAATCCTTGGTGGA+AGG + chr2_3:56707373-56707392 Msa0301020:CDS 45.0%
! GTGGAAGGAAGTGCAAGAAT+AGG + chr2_3:56707388-56707407 Msa0301020:CDS 45.0%
! GGGCTTAATCTGGAATATGG+TGG + chr2_3:56707496-56707515 Msa0301020:CDS 45.0%
!! AATCTGGAATATGGTGGACC+AGG + chr2_3:56707502-56707521 Msa0301020:CDS 45.0%
CCCATGAATGTTTCTTGACC+TGG - chr2_3:56707523-56707542 None:intergenic 45.0%
TGCATTGTTGACACGTGACT+TGG - chr2_3:56707811-56707830 None:intergenic 45.0%
! ACGAGAGATTTCCTTGGTGT+TGG + chr2_3:56707955-56707974 Msa0301020:CDS 45.0%
ATGAGTCATCTCCAACACCA+AGG - chr2_3:56707969-56707988 None:intergenic 45.0%
AAGAAGGTGAACAACTTGCC+TGG - chr2_3:56706131-56706150 None:intergenic 45.0%
CATGTGCGAAGTTTGCAACA+AGG + chr2_3:56706318-56706337 Msa0301020:CDS 45.0%
! GTCGATGTAGCTGTAGGTTT+TGG - chr2_3:56706357-56706376 None:intergenic 45.0%
GAAACAAGCTGGAGGTGATT+AGG + chr2_3:56706410-56706429 Msa0301020:CDS 45.0%
CTAAAGCTCTACTAGGGTCA+TGG - chr2_3:56706474-56706493 None:intergenic 45.0%
CATGACCCTAGTAGAGCTTT+AGG + chr2_3:56706472-56706491 Msa0301020:CDS 45.0%
GGTCTCCTAAAGCTCTACTA+GGG - chr2_3:56706480-56706499 None:intergenic 45.0%
AGGTCTCCTAAAGCTCTACT+AGG - chr2_3:56706481-56706500 None:intergenic 45.0%
!! AGAGCTTTAGGAGACCTAAC+AGG + chr2_3:56706484-56706503 Msa0301020:CDS 45.0%
!! GAGCTTTAGGAGACCTAACA+GGG + chr2_3:56706485-56706504 Msa0301020:CDS 45.0%
ATTGTGGCACACTATTCTCC+AGG + chr2_3:56706638-56706657 Msa0301020:CDS 45.0%
GTGCATCATGCTTGTATACC+TGG - chr2_3:56706659-56706678 None:intergenic 45.0%
! AAAATCAGGGTGTCAACCGA+CGG + chr2_3:56706773-56706792 Msa0301020:intron 45.0%
TTCCACCAAGGATTCACAGA+AGG - chr2_3:56707374-56707393 None:intergenic 45.0%
TTCTGTGAATCCTTGGTGGA+AGG + chr2_3:56707373-56707392 Msa0301020:CDS 45.0%
! GTGGAAGGAAGTGCAAGAAT+AGG + chr2_3:56707388-56707407 Msa0301020:CDS 45.0%
! GGGCTTAATCTGGAATATGG+TGG + chr2_3:56707496-56707515 Msa0301020:CDS 45.0%
!! AATCTGGAATATGGTGGACC+AGG + chr2_3:56707502-56707521 Msa0301020:CDS 45.0%
CCCATGAATGTTTCTTGACC+TGG - chr2_3:56707523-56707542 None:intergenic 45.0%
TGCATTGTTGACACGTGACT+TGG - chr2_3:56707811-56707830 None:intergenic 45.0%
! ACGAGAGATTTCCTTGGTGT+TGG + chr2_3:56707955-56707974 Msa0301020:CDS 45.0%
ATGAGTCATCTCCAACACCA+AGG - chr2_3:56707969-56707988 None:intergenic 45.0%
!! GTTTGAGGTGCCTCTGAAGT+TGG - chr2_3:56706042-56706061 None:intergenic 50.0%
AGAAGTCTACCAGGAACACC+AGG + chr2_3:56706110-56706129 Msa0301020:CDS 50.0%
AACAACTTGCCTGGTGTTCC+TGG - chr2_3:56706122-56706141 None:intergenic 50.0%
CTGAATCTGGATCTGCAGCA+TGG - chr2_3:56706252-56706271 None:intergenic 50.0%
AACCTACAGCTACATCGACG+AGG + chr2_3:56706358-56706377 Msa0301020:CDS 50.0%
GACGAGGACACAATCTTCCA+TGG + chr2_3:56706374-56706393 Msa0301020:CDS 50.0%
GCTGGAGGTGATTAGGAAGA+AGG + chr2_3:56706417-56706436 Msa0301020:CDS 50.0%
! GAAAGCACGGTGAGAAGAAG+TGG + chr2_3:56706527-56706546 Msa0301020:CDS 50.0%
CACAGAAGGCTCTGTGAGTT+AGG - chr2_3:56707360-56707379 None:intergenic 50.0%
CAGAGCCTTCTGTGAATCCT+TGG + chr2_3:56707366-56707385 Msa0301020:CDS 50.0%
AGCCTTCTGTGAATCCTTGG+TGG + chr2_3:56707369-56707388 Msa0301020:CDS 50.0%
TCTTGCACTTCCTTCCACCA+AGG - chr2_3:56707386-56707405 None:intergenic 50.0%
!! GTTTGAGGTGCCTCTGAAGT+TGG - chr2_3:56706042-56706061 None:intergenic 50.0%
AGAAGTCTACCAGGAACACC+AGG + chr2_3:56706110-56706129 Msa0301020:CDS 50.0%
AACAACTTGCCTGGTGTTCC+TGG - chr2_3:56706122-56706141 None:intergenic 50.0%
CTGAATCTGGATCTGCAGCA+TGG - chr2_3:56706252-56706271 None:intergenic 50.0%
AACCTACAGCTACATCGACG+AGG + chr2_3:56706358-56706377 Msa0301020:CDS 50.0%
GACGAGGACACAATCTTCCA+TGG + chr2_3:56706374-56706393 Msa0301020:CDS 50.0%
GCTGGAGGTGATTAGGAAGA+AGG + chr2_3:56706417-56706436 Msa0301020:CDS 50.0%
! GAAAGCACGGTGAGAAGAAG+TGG + chr2_3:56706527-56706546 Msa0301020:CDS 50.0%
CACAGAAGGCTCTGTGAGTT+AGG - chr2_3:56707360-56707379 None:intergenic 50.0%
CAGAGCCTTCTGTGAATCCT+TGG + chr2_3:56707366-56707385 Msa0301020:CDS 50.0%
AGCCTTCTGTGAATCCTTGG+TGG + chr2_3:56707369-56707388 Msa0301020:CDS 50.0%
TCTTGCACTTCCTTCCACCA+AGG - chr2_3:56707386-56707405 None:intergenic 50.0%
GTCCTCGTCGATGTAGCTGT+AGG - chr2_3:56706363-56706382 None:intergenic 55.0%
GTCCTCGTCGATGTAGCTGT+AGG - chr2_3:56706363-56706382 None:intergenic 55.0%
TGGTGCACGCAGCTCTTCTC+TGG - chr2_3:56706454-56706473 None:intergenic 60.0%
TGGTGCACGCAGCTCTTCTC+TGG - chr2_3:56706454-56706473 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 56706008 56708083 56706008 ID=Msa0301020;Name=Msa0301020
chr2_3 mRNA 56706008 56708083 56706008 ID=Msa0301020-mRNA-1;Parent=Msa0301020;Name=Msa0301020-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|420
chr2_3 exon 56706008 56706131 56706008 ID=Msa0301020-mRNA-1:exon:18217;Parent=Msa0301020-mRNA-1
chr2_3 exon 56706260 56706659 56706260 ID=Msa0301020-mRNA-1:exon:18218;Parent=Msa0301020-mRNA-1
chr2_3 exon 56707345 56708083 56707345 ID=Msa0301020-mRNA-1:exon:18219;Parent=Msa0301020-mRNA-1
chr2_3 CDS 56706008 56706131 56706008 ID=Msa0301020-mRNA-1:cds;Parent=Msa0301020-mRNA-1
chr2_3 CDS 56706260 56706659 56706260 ID=Msa0301020-mRNA-1:cds;Parent=Msa0301020-mRNA-1
chr2_3 CDS 56707345 56708083 56707345 ID=Msa0301020-mRNA-1:cds;Parent=Msa0301020-mRNA-1
Gene Sequence

>Msa0301020

ATGATGTCTGAAGAAGCGGTTTCTGATACTTCCAACTTCAGAGGCACCTCAAACTCAAACCCTAATCTTCCTAACCCTAATTCAAATTCAGTTAAGAGAAAAAGAAGTCTACCAGGAACACCAGATCCAGATTCAGAAGTGATTGCTCTATCACCAAAATCACTGATGACAACAAACCGTTTCATGTGCGAAGTTTGCAACAAGGGTTTCAAGAGAGACCAAAACCTACAGCTACATCGACGAGGACACAATCTTCCATGGAAGCTTAAGCAAAGAAACAAGCTGGAGGTGATTAGGAAGAAGGTGTACGTGTGTCCAGAGAAGAGCTGCGTGCACCATGACCCTAGTAGAGCTTTAGGAGACCTAACAGGGATAAAAAAGCACTTTAGTAGAAAGCACGGTGAGAAGAAGTGGAAGTGTGATAAGTGTTCTAAGAAATATGCAGTTCAATCTGATTGGAAGGCTCATAGTAAGATTTGTGGCACTAAAGAGTACAGATGTGATTGTGGCACACTATTCTCCAGGAAAGACAGCTTCCTAACTCACAGAGCCTTCTGTGAATCCTTGGTGGAAGGAAGTGCAAGAATAGGTTCAGTTCCAGCAGTTATATCCAACTTTGGAAACAATCTTTTGATAAACACTCAAGCACCAAGAAATATTCCTCATGGTTTATTTGGGCTTAATCTGGAATATGGTGGACCAGGTCAAGAAACATTCATGGGAAATTTTCCCAATAATAACATTCCTCATCATAGTTATCTTCCAAATTCTAGTGCATTCTCATCATCAGGAGCAAACTCTGATTTAGACTTAGTCCACACTTTTGGTTTATTACCACAAGGACAATGGATGAATTACAAATACAATGATCAACATGCAGAAACATCATTTACAAGTAGTGGGGTTCTAAAGCTAGAACAACAACAAGAAGAAGACAAAATGCATGATTTGTCTCATTTATATTCTCAGAACCAATTACAAGGATGTCCAAGTCACGTGTCAACAATGCAAACTACAACTACAAAGCTTATCAATGGTAATAATGATGCTGGTTTCAATAATATTGTTGAAGTTAAGAAATTGTTCAACCAATGTAACCATGCAGGAAATTTCAATGAAGATCAGTTGAGTTTAACGAGAGATTTCCTTGGTGTTGGAGATGACTCATTGAAGAGAACCTTGTTGCAACAAGAGATGATACCTAGGTTCAATCCAATAGAATCTGTCACGAACTTGCAAAGTGAGTTTGGTGGACACTATTGA

Protein sequence

>Msa0301020

MMSEEAVSDTSNFRGTSNSNPNLPNPNSNSVKRKRSLPGTPDPDSEVIALSPKSLMTTNRFMCEVCNKGFKRDQNLQLHRRGHNLPWKLKQRNKLEVIRKKVYVCPEKSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYRCDCGTLFSRKDSFLTHRAFCESLVEGSARIGSVPAVISNFGNNLLINTQAPRNIPHGLFGLNLEYGGPGQETFMGNFPNNNIPHHSYLPNSSAFSSSGANSDLDLVHTFGLLPQGQWMNYKYNDQHAETSFTSSGVLKLEQQQEEDKMHDLSHLYSQNQLQGCPSHVSTMQTTTTKLINGNNDAGFNNIVEVKKLFNQCNHAGNFNEDQLSLTRDFLGVGDDSLKRTLLQQEMIPRFNPIESVTNLQSEFGGHY*