Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373590 | XP_003593210.1 | 93.668 | 379 | 19 | 2 | 1 | 379 | 1 | 374 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373590 | G7INX2 | 93.668 | 379 | 19 | 2 | 1 | 379 | 1 | 374 | 0.0 | 674 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006820 | Msa1373590 | 0.815437 | 9.249649e-52 | -8.615850e-47 |
| Msa0028610 | Msa1373590 | 0.808679 | 2.750928e-50 | -8.615850e-47 |
| Msa0035090 | Msa1373590 | 0.831389 | 1.716311e-55 | -8.615850e-47 |
| Msa0039200 | Msa1373590 | 0.830134 | 3.485138e-55 | -8.615850e-47 |
| Msa0040190 | Msa1373590 | 0.817960 | 2.514569e-52 | -8.615850e-47 |
| Msa0050500 | Msa1373590 | 0.816421 | 5.579558e-52 | -8.615850e-47 |
| Msa0076280 | Msa1373590 | 0.810970 | 8.844030e-51 | -8.615850e-47 |
| Msa0086820 | Msa1373590 | 0.833548 | 5.007464e-56 | -8.615850e-47 |
| Msa0087880 | Msa1373590 | 0.800511 | 1.392504e-48 | -8.615850e-47 |
| Msa0095140 | Msa1373590 | 0.819164 | 1.341178e-52 | -8.615850e-47 |
| Msa0095240 | Msa1373590 | 0.812994 | 3.203282e-51 | -8.615850e-47 |
| Msa0095270 | Msa1373590 | 0.820330 | 7.261049e-53 | -8.615850e-47 |
| Msa0096230 | Msa1373590 | 0.804269 | 2.342523e-49 | -8.615850e-47 |
| Msa0099830 | Msa1373590 | 0.821095 | 4.844324e-53 | -8.615850e-47 |
| Msa0100910 | Msa1373590 | 0.801628 | 8.230559e-49 | -8.615850e-47 |
| Msa1351560 | Msa1373590 | 0.817378 | 3.401709e-52 | -8.615850e-47 |
| Msa1354850 | Msa1373590 | 0.818750 | 1.665250e-52 | -8.615850e-47 |
| Msa1355020 | Msa1373590 | 0.823247 | 1.535226e-53 | -8.615850e-47 |
| Msa1357720 | Msa1373590 | 0.805733 | 1.157316e-49 | -8.615850e-47 |
| Msa1365210 | Msa1373590 | 0.812781 | 3.567651e-51 | -8.615850e-47 |
| Msa1368180 | Msa1373590 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa1371250 | Msa1373590 | 0.826976 | 2.018554e-54 | -8.615850e-47 |
| Msa1373590 | Msa1380540 | 0.827678 | 1.369985e-54 | -8.615850e-47 |
| Msa1373590 | Msa1385940 | 0.851424 | 8.953920e-61 | -8.615850e-47 |
| Msa1373590 | Msa1387090 | 0.815905 | 7.275988e-52 | -8.615850e-47 |
| Msa1373590 | Msa1393600 | 0.823229 | 1.550028e-53 | -8.615850e-47 |
| Msa1373590 | Msa1394090 | 0.828719 | 7.690123e-55 | -8.615850e-47 |
| Msa1373590 | Msa1394100 | 0.807284 | 5.449361e-50 | -8.615850e-47 |
| Msa1373590 | Msa1394280 | 0.824580 | 7.473930e-54 | -8.615850e-47 |
| Msa1373590 | Msa1397040 | 0.811046 | 8.514355e-51 | -8.615850e-47 |
| Msa1373590 | Msa1415120 | 0.839258 | 1.764481e-57 | -8.615850e-47 |
| Msa1373590 | Msa1422750 | 0.864304 | 1.338895e-64 | -8.615850e-47 |
| Msa1373590 | Msa1435470 | 0.803249 | 3.814992e-49 | -8.615850e-47 |
| Msa1373590 | Msa1438420 | 0.822752 | 2.002653e-53 | -8.615850e-47 |
| Msa1373590 | Msa1439160 | 0.801645 | 8.167342e-49 | -8.615850e-47 |
| Msa0606370 | Msa1373590 | 0.805598 | 1.235588e-49 | -8.615850e-47 |
| Msa0653710 | Msa1373590 | 0.814046 | 1.880065e-51 | -8.615850e-47 |
| Msa0659640 | Msa1373590 | 0.800449 | 1.433695e-48 | -8.615850e-47 |
| Msa0662850 | Msa1373590 | 0.860950 | 1.444738e-63 | -8.615850e-47 |
| Msa0698900 | Msa1373590 | 0.807047 | 6.115608e-50 | -8.615850e-47 |
| Msa0706710 | Msa1373590 | 0.815283 | 1.000813e-51 | -8.615850e-47 |
| Msa0721420 | Msa1373590 | 0.804589 | 2.008637e-49 | -8.615850e-47 |
| Msa0729780 | Msa1373590 | 0.819488 | 1.131031e-52 | -8.615850e-47 |
| Msa0731740 | Msa1373590 | 0.827742 | 1.322787e-54 | -8.615850e-47 |
| Msa0733570 | Msa1373590 | 0.849344 | 3.435130e-60 | -8.615850e-47 |
| Msa0736330 | Msa1373590 | 0.818361 | 2.040347e-52 | -8.615850e-47 |
| Msa0736930 | Msa1373590 | 0.875512 | 2.906169e-68 | -8.615850e-47 |
| Msa0739570 | Msa1373590 | 0.816836 | 4.503009e-52 | -8.615850e-47 |
| Msa0739610 | Msa1373590 | 0.805031 | 1.624656e-49 | -8.615850e-47 |
| Msa0751000 | Msa1373590 | 0.854106 | 1.535252e-61 | -8.615850e-47 |
| Msa0755590 | Msa1373590 | 0.808409 | 3.141603e-50 | -8.615850e-47 |
| Msa0766880 | Msa1373590 | 0.844555 | 7.033461e-59 | -8.615850e-47 |
| Msa0770020 | Msa1373590 | 0.828564 | 8.381466e-55 | -8.615850e-47 |
| Msa0771960 | Msa1373590 | 0.826823 | 2.195137e-54 | -8.615850e-47 |
| Msa0772040 | Msa1373590 | 0.831720 | 1.422332e-55 | -8.615850e-47 |
| Msa0774680 | Msa1373590 | 0.851662 | 7.667234e-61 | -8.615850e-47 |
| Msa0778060 | Msa1373590 | 0.843973 | 1.007628e-58 | -8.615850e-47 |
| Msa0781900 | Msa1373590 | 0.806463 | 8.126458e-50 | -8.615850e-47 |
| Msa0782030 | Msa1373590 | 0.818229 | 2.185289e-52 | -8.615850e-47 |
| Msa0782330 | Msa1373590 | 0.826303 | 2.920528e-54 | -8.615850e-47 |
| Msa0786970 | Msa1373590 | 0.816267 | 6.039536e-52 | -8.615850e-47 |
| Msa0794040 | Msa1373590 | 0.868186 | 7.872399e-66 | -8.615850e-47 |
| Msa0796450 | Msa1373590 | 0.818185 | 2.236430e-52 | -8.615850e-47 |
| Msa0800400 | Msa1373590 | 0.804802 | 1.813581e-49 | -8.615850e-47 |
| Msa0812230 | Msa1373590 | 0.819283 | 1.259783e-52 | -8.615850e-47 |
| Msa0815950 | Msa1373590 | 0.810153 | 1.328175e-50 | -8.615850e-47 |
| Msa0821490 | Msa1373590 | 0.823774 | 1.155903e-53 | -8.615850e-47 |
| Msa0130120 | Msa1373590 | 0.832354 | 9.918591e-56 | -8.615850e-47 |
| Msa0133670 | Msa1373590 | 0.834149 | 3.542144e-56 | -8.615850e-47 |
| Msa0133880 | Msa1373590 | 0.841190 | 5.522752e-58 | -8.615850e-47 |
| Msa0134550 | Msa1373590 | 0.818185 | 2.235997e-52 | -8.615850e-47 |
| Msa0139740 | Msa1373590 | 0.824439 | 8.068868e-54 | -8.615850e-47 |
| Msa0152610 | Msa1373590 | 0.810610 | 1.058252e-50 | -8.615850e-47 |
| Msa0175480 | Msa1373590 | 0.817880 | 2.621283e-52 | -8.615850e-47 |
| Msa0175900 | Msa1373590 | 0.832627 | 8.486130e-56 | -8.615850e-47 |
| Msa0184120 | Msa1373590 | 0.834611 | 2.711308e-56 | -8.615850e-47 |
| Msa0189880 | Msa1373590 | 0.856160 | 3.880946e-62 | -8.615850e-47 |
| Msa0207530 | Msa1373590 | 0.825010 | 5.918172e-54 | -8.615850e-47 |
| Msa0207900 | Msa1373590 | 0.812391 | 4.340297e-51 | -8.615850e-47 |
| Msa0216010 | Msa1373590 | 0.860607 | 1.836188e-63 | -8.615850e-47 |
| Msa0216560 | Msa1373590 | 0.835955 | 1.241044e-56 | -8.615850e-47 |
| Msa0221860 | Msa1373590 | 0.820289 | 7.419623e-53 | -8.615850e-47 |
| Msa1232640 | Msa1373590 | 0.828433 | 9.015096e-55 | -8.615850e-47 |
| Msa1235050 | Msa1373590 | 0.807023 | 6.188506e-50 | -8.615850e-47 |
| Msa1246420 | Msa1373590 | 0.802589 | 5.222710e-49 | -8.615850e-47 |
| Msa1248400 | Msa1373590 | 0.842871 | 1.983973e-58 | -8.615850e-47 |
| Msa1252040 | Msa1373590 | 0.822078 | 2.870926e-53 | -8.615850e-47 |
| Msa1264230 | Msa1373590 | 0.829924 | 3.920825e-55 | -8.615850e-47 |
| Msa1265250 | Msa1373590 | 0.822329 | 2.511421e-53 | -8.615850e-47 |
| Msa1302780 | Msa1373590 | 0.804665 | 1.937487e-49 | -8.615850e-47 |
| Msa1302920 | Msa1373590 | 0.836460 | 9.240349e-57 | -8.615850e-47 |
| Msa1310260 | Msa1373590 | 0.820227 | 7.666699e-53 | -8.615850e-47 |
| Msa1316160 | Msa1373590 | 0.858817 | 6.346865e-63 | -8.615850e-47 |
| Msa1323920 | Msa1373590 | 0.835773 | 1.380651e-56 | -8.615850e-47 |
| Msa1327820 | Msa1373590 | 0.818636 | 1.768039e-52 | -8.615850e-47 |
| Msa1334650 | Msa1373590 | 0.803001 | 4.293545e-49 | -8.615850e-47 |
| Msa0369750 | Msa1373590 | 0.858951 | 5.789049e-63 | -8.615850e-47 |
| Msa0377460 | Msa1373590 | 0.830191 | 3.374160e-55 | -8.615850e-47 |
| Msa0381370 | Msa1373590 | 0.830808 | 2.384204e-55 | -8.615850e-47 |
| Msa0390950 | Msa1373590 | 0.816347 | 5.794725e-52 | -8.615850e-47 |
| Msa0416990 | Msa1373590 | 0.821342 | 4.249147e-53 | -8.615850e-47 |
| Msa0417130 | Msa1373590 | 0.813311 | 2.728808e-51 | -8.615850e-47 |
| Msa0420080 | Msa1373590 | 0.805532 | 1.275888e-49 | -8.615850e-47 |
| Msa0422520 | Msa1373590 | 0.822256 | 2.610460e-53 | -8.615850e-47 |
| Msa0426860 | Msa1373590 | 0.828463 | 8.866717e-55 | -8.615850e-47 |
| Msa0426890 | Msa1373590 | 0.822121 | 2.805347e-53 | -8.615850e-47 |
| Msa0427050 | Msa1373590 | 0.837517 | 4.959756e-57 | -8.615850e-47 |
| Msa0429100 | Msa1373590 | 0.818278 | 2.130706e-52 | -8.615850e-47 |
| Msa0429130 | Msa1373590 | 0.822910 | 1.839991e-53 | -8.615850e-47 |
| Msa0448400 | Msa1373590 | 0.812389 | 4.345800e-51 | -8.615850e-47 |
| Msa0456480 | Msa1373590 | 0.822735 | 2.020525e-53 | -8.615850e-47 |
| Msa0463540 | Msa1373590 | 0.801215 | 1.000271e-48 | -8.615850e-47 |
| Msa0463960 | Msa1373590 | 0.860010 | 2.782669e-63 | -8.615850e-47 |
| Msa0473320 | Msa1373590 | 0.801707 | 7.928907e-49 | -8.615850e-47 |
| Msa0473450 | Msa1373590 | 0.852972 | 3.249204e-61 | -8.615850e-47 |
| Msa0475360 | Msa1373590 | 0.818006 | 2.455345e-52 | -8.615850e-47 |
| Msa0981300 | Msa1373590 | 0.809819 | 1.566720e-50 | -8.615850e-47 |
| Msa0981900 | Msa1373590 | 0.985767 | 1.334960e-164 | -8.615850e-47 |
| Msa0983670 | Msa1373590 | 0.805917 | 1.058737e-49 | -8.615850e-47 |
| Msa1016130 | Msa1373590 | 0.833559 | 4.974872e-56 | -8.615850e-47 |
| Msa1024580 | Msa1373590 | 0.826398 | 2.773395e-54 | -8.615850e-47 |
| Msa1030280 | Msa1373590 | 0.812717 | 3.684126e-51 | -8.615850e-47 |
| Msa1033230 | Msa1373590 | 0.816707 | 4.812378e-52 | -8.615850e-47 |
| Msa1049440 | Msa1373590 | 0.868170 | 7.967736e-66 | -8.615850e-47 |
| Msa1051410 | Msa1373590 | 0.813014 | 3.170589e-51 | -8.615850e-47 |
| Msa1063180 | Msa1373590 | 0.818638 | 1.765600e-52 | -8.615850e-47 |
| Msa1072770 | Msa1373590 | 0.821743 | 3.433142e-53 | -8.615850e-47 |
| Msa1079610 | Msa1373590 | 0.815590 | 8.551275e-52 | -8.615850e-47 |
| Msa1086020 | Msa1373590 | 0.809871 | 1.526988e-50 | -8.615850e-47 |
| Msa1086060 | Msa1373590 | 0.800522 | 1.385752e-48 | -8.615850e-47 |
| Msa1086160 | Msa1373590 | 0.814728 | 1.329076e-51 | -8.615850e-47 |
| Msa1086330 | Msa1373590 | 0.817556 | 3.102483e-52 | -8.615850e-47 |
| Msa1086340 | Msa1373590 | 0.800876 | 1.172996e-48 | -8.615850e-47 |
| Msa1086630 | Msa1373590 | 0.821806 | 3.318978e-53 | -8.615850e-47 |
| Msa1086830 | Msa1373590 | 0.823142 | 1.623808e-53 | -8.615850e-47 |
| Msa1098070 | Msa1373590 | 0.806953 | 6.403363e-50 | -8.615850e-47 |
| Msa1102180 | Msa1373590 | 0.841256 | 5.304435e-58 | -8.615850e-47 |
| Msa0256170 | Msa1373590 | 0.841917 | 3.552821e-58 | -8.615850e-47 |
| Msa0268180 | Msa1373590 | 0.810819 | 9.537790e-51 | -8.615850e-47 |
| Msa0268220 | Msa1373590 | 0.811766 | 5.942111e-51 | -8.615850e-47 |
| Msa0268420 | Msa1373590 | 0.802746 | 4.847328e-49 | -8.615850e-47 |
| Msa0268500 | Msa1373590 | 0.805968 | 1.033037e-49 | -8.615850e-47 |
| Msa0270610 | Msa1373590 | 0.817655 | 2.947067e-52 | -8.615850e-47 |
| Msa0295270 | Msa1373590 | 0.821471 | 3.967010e-53 | -8.615850e-47 |
| Msa0295840 | Msa1373590 | 0.833759 | 4.433648e-56 | -8.615850e-47 |
| Msa0301800 | Msa1373590 | 0.834310 | 3.228041e-56 | -8.615850e-47 |
| Msa0306130 | Msa1373590 | 0.821159 | 4.682358e-53 | -8.615850e-47 |
| Msa0310490 | Msa1373590 | 0.854173 | 1.467845e-61 | -8.615850e-47 |
| Msa0338570 | Msa1373590 | 0.815446 | 9.208864e-52 | -8.615850e-47 |
| Msa0344250 | Msa1373590 | 0.826829 | 2.188603e-54 | -8.615850e-47 |
| Msa1108530 | Msa1373590 | 0.816375 | 5.712595e-52 | -8.615850e-47 |
| Msa1122480 | Msa1373590 | 0.857629 | 1.433423e-62 | -8.615850e-47 |
| Msa1123340 | Msa1373590 | 0.848830 | 4.773696e-60 | -8.615850e-47 |
| Msa1124180 | Msa1373590 | 0.808360 | 3.218471e-50 | -8.615850e-47 |
| Msa1124440 | Msa1373590 | 0.824963 | 6.070465e-54 | -8.615850e-47 |
| Msa1132320 | Msa1373590 | 0.849526 | 3.056629e-60 | -8.615850e-47 |
| Msa1152280 | Msa1373590 | 0.816137 | 6.457392e-52 | -8.615850e-47 |
| Msa1157160 | Msa1373590 | 0.804221 | 2.396672e-49 | -8.615850e-47 |
| Msa1161120 | Msa1373590 | 0.833729 | 4.510482e-56 | -8.615850e-47 |
| Msa1168130 | Msa1373590 | 0.807221 | 5.619239e-50 | -8.615850e-47 |
| Msa1173410 | Msa1373590 | 0.811160 | 8.046041e-51 | -8.615850e-47 |
| Msa1175970 | Msa1373590 | 0.816739 | 4.734776e-52 | -8.615850e-47 |
| Msa1179680 | Msa1373590 | 0.805665 | 1.196514e-49 | -8.615850e-47 |
| Msa1195860 | Msa1373590 | 0.830429 | 2.950890e-55 | -8.615850e-47 |
| Msa1218720 | Msa1373590 | 0.802970 | 4.356057e-49 | -8.615850e-47 |
| Msa1220740 | Msa1373590 | 0.803007 | 4.280694e-49 | -8.615850e-47 |
| Msa0487560 | Msa1373590 | 0.805122 | 1.554615e-49 | -8.615850e-47 |
| Msa0487620 | Msa1373590 | 0.803514 | 3.361711e-49 | -8.615850e-47 |
| Msa0509500 | Msa1373590 | 0.854038 | 1.605802e-61 | -8.615850e-47 |
| Msa0509510 | Msa1373590 | 0.837356 | 5.455145e-57 | -8.615850e-47 |
| Msa0512770 | Msa1373590 | 0.821836 | 3.266624e-53 | -8.615850e-47 |
| Msa0517400 | Msa1373590 | 0.830098 | 3.555599e-55 | -8.615850e-47 |
| Msa0547050 | Msa1373590 | 0.816473 | 5.430117e-52 | -8.615850e-47 |
| Msa0549330 | Msa1373590 | 0.802209 | 6.252143e-49 | -8.615850e-47 |
| Msa0558890 | Msa1373590 | 0.843276 | 1.548295e-58 | -8.615850e-47 |
| Msa0568490 | Msa1373590 | 0.814997 | 1.158364e-51 | -8.615850e-47 |
| Msa0581440 | Msa1373590 | 0.805743 | 1.152183e-49 | -8.615850e-47 |
| Msa0582570 | Msa1373590 | 0.821862 | 3.221366e-53 | -8.615850e-47 |
| Msa0582580 | Msa1373590 | 0.807122 | 5.897115e-50 | -8.615850e-47 |
| Msa0601780 | Msa1373590 | 0.813187 | 2.906359e-51 | -8.615850e-47 |
| Msa0850520 | Msa1373590 | 0.810338 | 1.211156e-50 | -8.615850e-47 |
| Msa0852500 | Msa1373590 | 0.817427 | 3.316945e-52 | -8.615850e-47 |
| Msa0855490 | Msa1373590 | 0.836359 | 9.802258e-57 | -8.615850e-47 |
| Msa0860270 | Msa1373590 | 0.811955 | 5.404268e-51 | -8.615850e-47 |
| Msa0887070 | Msa1373590 | 0.801538 | 8.588810e-49 | -8.615850e-47 |
| Msa0897390 | Msa1373590 | 0.852377 | 4.803627e-61 | -8.615850e-47 |
| Msa0923910 | Msa1373590 | 0.824496 | 7.821159e-54 | -8.615850e-47 |
| Msa0924820 | Msa1373590 | 0.812888 | 3.379084e-51 | -8.615850e-47 |
| Msa0925020 | Msa1373590 | 0.821801 | 3.327523e-53 | -8.615850e-47 |
| Msa0931090 | Msa1373590 | 0.808952 | 2.404831e-50 | -8.615850e-47 |
| Msa0978000 | Msa1373590 | 0.838768 | 2.363190e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373590 | MtrunA17_Chr2g0279241 | 93.668 | 379 | 19 | 2 | 1 | 379 | 1 | 374 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373590 | AT5G64230.1 | 42.010 | 388 | 176 | 7 | 18 | 375 | 10 | 378 | 9.35e-89 | 273 |
| Msa1373590 | AT3G19920.1 | 32.911 | 316 | 163 | 5 | 92 | 371 | 111 | 413 | 3.23e-43 | 155 |
| Msa1373590 | AT3G19920.2 | 32.911 | 316 | 163 | 5 | 92 | 371 | 152 | 454 | 3.96e-43 | 156 |
Find 139 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGCGGTGGCGGATAATTT+AGG | 0.162639 | tig0019461:+26115 | Msa1373590:CDS |
| TTCAAAGAAGCCAAAGATTT+TGG | 0.169588 | tig0019461:+27450 | Msa1373590:CDS |
| ACTTATACCATTCATAAATT+TGG | 0.193080 | tig0019461:+27975 | Msa1373590:three_prime_UTR |
| TTTCGCGTTCTTCCCCATTT+TGG | 0.215075 | tig0019461:-25402 | None:intergenic |
| GAGGAGGGTGTGGAGGGTGG+TGG | 0.218739 | tig0019461:+25964 | Msa1373590:CDS |
| CGAAAAGAAAATAACCAAAA+TGG | 0.222336 | tig0019461:+25388 | Msa1373590:exon |
| TACTGCTGATCCTCGTTTGC+AGG | 0.243765 | tig0019461:+26150 | Msa1373590:CDS |
| CTTGCTGTTTAAGTTTAATA+TGG | 0.279159 | tig0019461:+28029 | Msa1373590:three_prime_UTR |
| CGGGGCATCAATGCCATTAC+TGG | 0.280805 | tig0019461:-27562 | None:intergenic |
| TTCGTCTGCGCCAAAATCTT+TGG | 0.282865 | tig0019461:-27460 | None:intergenic |
| GGGTGTGGAGGGTGGTGGGG+TGG | 0.285106 | tig0019461:+25969 | Msa1373590:CDS |
| GGAGGGTGTGGAGGGTGGTG+GGG | 0.287513 | tig0019461:+25966 | Msa1373590:CDS |
| GAGGAGGAGGGTGTGGAGGG+TGG | 0.291263 | tig0019461:+25961 | Msa1373590:CDS |
| TTATGAATGGTATAAGTATA+CGG | 0.296718 | tig0019461:-27969 | None:intergenic |
| AAGAACAGGTTCTTTCTCTT+TGG | 0.297051 | tig0019461:+27661 | Msa1373590:CDS |
| GCTTCGCTTGTTAAACTTGC+AGG | 0.297214 | tig0019461:+26172 | Msa1373590:CDS |
| TGGTTTAAGTGGTGGTGTTC+CGG | 0.299500 | tig0019461:+26012 | Msa1373590:CDS |
| GTGGAGGGTGGTGGGGTGGA+AGG | 0.327039 | tig0019461:+25973 | Msa1373590:CDS |
| AGGAGGGTGTGGAGGGTGGT+GGG | 0.327315 | tig0019461:+25965 | Msa1373590:CDS |
| GTTGCTTTGTCTTCAGCATT+TGG | 0.333264 | tig0019461:+25848 | Msa1373590:CDS |
| TGGTGAGGAGGAGGGTGTGG+AGG | 0.336421 | tig0019461:+25957 | Msa1373590:CDS |
| GGGCGGTGGCGGATAATTTA+GGG | 0.342904 | tig0019461:+26116 | Msa1373590:CDS |
| GTGATGGAGGAGAGTGGTAT+AGG | 0.347523 | tig0019461:+25933 | Msa1373590:CDS |
| AATTGGCAGCGGAGTTGGTT+TGG | 0.367956 | tig0019461:+26041 | Msa1373590:CDS |
| TTGCTTTGTCTTCAGCATTT+GGG | 0.372512 | tig0019461:+25849 | Msa1373590:CDS |
| GAAAAGAAAATAACCAAAAT+GGG | 0.374894 | tig0019461:+25389 | Msa1373590:exon |
| GTGGAAGGTGAAGGGAGGTG+AGG | 0.381406 | tig0019461:+25988 | Msa1373590:CDS |
| GGATGATGAAACGGAGGGTT+TGG | 0.381540 | tig0019461:-25559 | None:intergenic |
| CTCTCATTGATGCTCAATGC+CGG | 0.381820 | tig0019461:-27582 | None:intergenic |
| GGATGGTGAGGAGGAGGGTG+TGG | 0.384248 | tig0019461:+25954 | Msa1373590:CDS |
| GCATAACATGATTGGAGGTT+TGG | 0.384676 | tig0019461:-27720 | None:intergenic |
| GGTGAAAAGGGAAGAGATTA+GGG | 0.395429 | tig0019461:-25477 | None:intergenic |
| GAATGAAACGGAGGAGGAAG+AGG | 0.397994 | tig0019461:-25592 | None:intergenic |
| TGGTGTTCCGGCGGAGAAAT+TGG | 0.402368 | tig0019461:+26024 | Msa1373590:CDS |
| GGTGAGGAGGAGGGTGTGGA+GGG | 0.415395 | tig0019461:+25958 | Msa1373590:CDS |
| TGGTGAAAAGGGAAGAGATT+AGG | 0.417039 | tig0019461:-25478 | None:intergenic |
| GGTATAGGATGGTGAGGAGG+AGG | 0.417760 | tig0019461:+25948 | Msa1373590:CDS |
| TCTCATTGATGCTCAATGCC+GGG | 0.418765 | tig0019461:-27581 | None:intergenic |
| GATCAAGGAGAGGGTGAAGA+AGG | 0.422863 | tig0019461:+25911 | Msa1373590:CDS |
| CATGGCTGCCATTGTTGTGC+AGG | 0.422978 | tig0019461:+27538 | Msa1373590:CDS |
| GGTGGTGGGGTGGAAGGTGA+AGG | 0.423207 | tig0019461:+25979 | Msa1373590:CDS |
| CGAAGCAGTTCGATCGTTAA+CGG | 0.429812 | tig0019461:+25766 | Msa1373590:CDS |
| GGCTGAGTTGGAGAGGATGT+TGG | 0.432888 | tig0019461:+27605 | Msa1373590:CDS |
| GTGGGGTGGAAGGTGAAGGG+AGG | 0.443740 | tig0019461:+25983 | Msa1373590:CDS |
| CAACGGCGGTGGTGGTGAAA+AGG | 0.444067 | tig0019461:-25490 | None:intergenic |
| GAATGTCAAAGAACTATCAT+AGG | 0.446139 | tig0019461:+27906 | Msa1373590:three_prime_UTR |
| TGGAAGGTGAAGGGAGGTGA+GGG | 0.448134 | tig0019461:+25989 | Msa1373590:CDS |
| CATCAATGAGAGGGCTGAGT+TGG | 0.451437 | tig0019461:+27593 | Msa1373590:CDS |
| AAGTTCTAAGTTATATCAAC+AGG | 0.453490 | tig0019461:+27866 | Msa1373590:three_prime_UTR |
| GGAGAAATTGGCAGCGGAGT+TGG | 0.458127 | tig0019461:+26036 | Msa1373590:CDS |
| TGTAGTTGACAGAGAAGGAG+AGG | 0.458499 | tig0019461:-25529 | None:intergenic |
| TACACTTCCAAATTTATGAA+TGG | 0.468718 | tig0019461:-27982 | None:intergenic |
| TCCCATTATAAAGCTAGAAA+AGG | 0.472297 | tig0019461:+25334 | Msa1373590:five_prime_UTR |
| AGGATGAGCAATGTGTAAAA+TGG | 0.472912 | tig0019461:-27689 | None:intergenic |
| GTTCGGAGGAGCGGCGGAAG+TGG | 0.474833 | tig0019461:-25455 | None:intergenic |
| GGAAAGCATTATAGAGGGGT+TGG | 0.475155 | tig0019461:+27626 | Msa1373590:CDS |
| GTTGACAGAGAAGGAGAGGA+AGG | 0.478361 | tig0019461:-25525 | None:intergenic |
| AGGAGCGGCGGAAGTGGTAG+TGG | 0.486154 | tig0019461:-25449 | None:intergenic |
| TCCAATCATGTTATGCTCGC+TGG | 0.490686 | tig0019461:+27727 | Msa1373590:CDS |
| GTATAGGATGGTGAGGAGGA+GGG | 0.494671 | tig0019461:+25949 | Msa1373590:CDS |
| CTGATGAAGCACTTCGGAGA+TGG | 0.497363 | tig0019461:+26095 | Msa1373590:CDS |
| AAGGTGGCGGAGAGAGATCA+AGG | 0.501719 | tig0019461:+25896 | Msa1373590:CDS |
| GGAGGTGAGGGTGGTTTAAG+TGG | 0.502354 | tig0019461:+26001 | Msa1373590:CDS |
| GGAGGAAGAGGTAGAAAGTG+AGG | 0.503057 | tig0019461:-25580 | None:intergenic |
| AGAAAGTGAGGATGATGAAA+CGG | 0.504841 | tig0019461:-25568 | None:intergenic |
| GAGGGTGAAGAAGGTGATGG+AGG | 0.506425 | tig0019461:+25920 | Msa1373590:CDS |
| ACTTCGGAGATGGGCGGTGG+CGG | 0.507790 | tig0019461:+26105 | Msa1373590:CDS |
| AAGAAGGAATGAAACGGAGG+AGG | 0.508172 | tig0019461:-25598 | None:intergenic |
| CTTTGTCTTCAGCATTTGGG+AGG | 0.510290 | tig0019461:+25852 | Msa1373590:CDS |
| AGAGAAGGAGAGGAAGGTGG+TGG | 0.511463 | tig0019461:-25519 | None:intergenic |
| GATGTTGGAAAGCATTATAG+AGG | 0.512128 | tig0019461:+27620 | Msa1373590:CDS |
| CAGTAATGGCATTGATGCCC+CGG | 0.513836 | tig0019461:+27563 | Msa1373590:CDS |
| AACGGCGGTGGTGGTGAAAA+GGG | 0.514502 | tig0019461:-25489 | None:intergenic |
| GGAGAGGGTGAAGAAGGTGA+TGG | 0.514958 | tig0019461:+25917 | Msa1373590:CDS |
| GTGGTGGGGTGGAAGGTGAA+GGG | 0.517185 | tig0019461:+25980 | Msa1373590:CDS |
| ACCAGCGAGCATAACATGAT+TGG | 0.520683 | tig0019461:-27728 | None:intergenic |
| GAGAGTGGTATAGGATGGTG+AGG | 0.520943 | tig0019461:+25942 | Msa1373590:CDS |
| ACAACTACTAGAGCTGAAGT+TGG | 0.523016 | tig0019461:-27840 | None:intergenic |
| ACATTCAAGAAATATTTAAG+TGG | 0.523311 | tig0019461:-27889 | None:intergenic |
| GAGTTTGTAGTTGACAGAGA+AGG | 0.525446 | tig0019461:-25534 | None:intergenic |
| AGCGAGCATAACATGATTGG+AGG | 0.527880 | tig0019461:-27725 | None:intergenic |
| GGAACAAGAGAAGCAAGAAC+AGG | 0.529481 | tig0019461:+27647 | Msa1373590:CDS |
| GAGATTAGGGTTCGGAGGAG+CGG | 0.531244 | tig0019461:-25464 | None:intergenic |
| GGCAGCGGAGTTGGTTTGGA+TGG | 0.531399 | tig0019461:+26045 | Msa1373590:CDS |
| AGTGGTATAGGATGGTGAGG+AGG | 0.536537 | tig0019461:+25945 | Msa1373590:CDS |
| GACAGAGAAGGAGAGGAAGG+TGG | 0.536632 | tig0019461:-25522 | None:intergenic |
| TGATGAAGCACTTCGGAGAT+GGG | 0.536824 | tig0019461:+26096 | Msa1373590:CDS |
| TCCGCTGCCAATTTCTCCGC+CGG | 0.537453 | tig0019461:-26031 | None:intergenic |
| AGCACTTCGGAGATGGGCGG+TGG | 0.537503 | tig0019461:+26102 | Msa1373590:CDS |
| CACATTGCTCATCCTCTGAC+TGG | 0.539240 | tig0019461:+27697 | Msa1373590:CDS |
| AAGGTGAAGGGAGGTGAGGG+TGG | 0.541781 | tig0019461:+25992 | Msa1373590:CDS |
| AAGAAGGTGATGGAGGAGAG+TGG | 0.541790 | tig0019461:+25927 | Msa1373590:CDS |
| TGGGAGGGCGTTGAGGCAGT+TGG | 0.543117 | tig0019461:+25868 | Msa1373590:CDS |
| AAAGGGAAGAGATTAGGGTT+CGG | 0.546803 | tig0019461:-25472 | None:intergenic |
| ATGTTGGAAAGCATTATAGA+GGG | 0.549563 | tig0019461:+27621 | Msa1373590:CDS |
| CAGCATTTGGGAGGGCGTTG+AGG | 0.554300 | tig0019461:+25861 | Msa1373590:CDS |
| TAAGTTTAATATGGTTGTTG+TGG | 0.556437 | tig0019461:+28038 | Msa1373590:three_prime_UTR |
| CAAGATGAAGCAATGCATGC+AGG | 0.557965 | tig0019461:+27494 | Msa1373590:CDS |
| CGGCGGAAGTGGTAGTGGCA+TGG | 0.558032 | tig0019461:-25444 | None:intergenic |
| TGGATCGACAAAGGTAGACT+TGG | 0.560457 | tig0019461:-25292 | None:intergenic |
| ATTAGGGTTCGGAGGAGCGG+CGG | 0.562847 | tig0019461:-25461 | None:intergenic |
| CTCATTGATGCTCAATGCCG+GGG | 0.565754 | tig0019461:-27580 | None:intergenic |
| TTTGTCTTCAGCATTTGGGA+GGG | 0.565879 | tig0019461:+25853 | Msa1373590:CDS |
| TTGTTGTGCAGGGCCAGTAA+TGG | 0.566356 | tig0019461:+27549 | Msa1373590:CDS |
| AACAGCAAGAACCAACATAG+TGG | 0.577713 | tig0019461:-28015 | None:intergenic |
| GTAACGAATGAACACCTTCG+AGG | 0.580463 | tig0019461:-25811 | None:intergenic |
| GGGAAGAGATTAGGGTTCGG+AGG | 0.585432 | tig0019461:-25469 | None:intergenic |
| ATGAGAGGGCTGAGTTGGAG+AGG | 0.589910 | tig0019461:+27598 | Msa1373590:CDS |
| AGCATATCAAGCCACTATGT+TGG | 0.590782 | tig0019461:+28004 | Msa1373590:three_prime_UTR |
| GGTGAGGGTGGTTTAAGTGG+TGG | 0.593095 | tig0019461:+26004 | Msa1373590:CDS |
| AAGTGAGGATGATGAAACGG+AGG | 0.593185 | tig0019461:-25565 | None:intergenic |
| GTTGAGGCAGTTGGAAGTGA+AGG | 0.595100 | tig0019461:+25877 | Msa1373590:CDS |
| CGGCATTGAGCATCAATGAG+AGG | 0.597450 | tig0019461:+27583 | Msa1373590:CDS |
| GCGGAGAGAGATCAAGGAGA+GGG | 0.598505 | tig0019461:+25902 | Msa1373590:CDS |
| TGTTGGAAAGCATTATAGAG+GGG | 0.598822 | tig0019461:+27622 | Msa1373590:CDS |
| ACAAGCGAAGCCTGCAAACG+AGG | 0.601298 | tig0019461:-26160 | None:intergenic |
| GGCATTGAGCATCAATGAGA+GGG | 0.602387 | tig0019461:+27584 | Msa1373590:CDS |
| TTGGAGGTTTGGCCAGTCAG+AGG | 0.607532 | tig0019461:-27709 | None:intergenic |
| GGTTTGGATGGTGAAGAAGA+TGG | 0.612162 | tig0019461:+26057 | Msa1373590:CDS |
| CTGAGAAAGAGCACGTCCGA+TGG | 0.614254 | tig0019461:-25699 | None:intergenic |
| GAGGCAGTTGGAAGTGAAGG+TGG | 0.615671 | tig0019461:+25880 | Msa1373590:CDS |
| TCCGGCGGAGAAATTGGCAG+CGG | 0.615724 | tig0019461:+26030 | Msa1373590:CDS |
| GTGAAGAAGATGGTGGAGTG+TGG | 0.615961 | tig0019461:+26067 | Msa1373590:CDS |
| ATGGCTGCCATTGTTGTGCA+GGG | 0.617221 | tig0019461:+27539 | Msa1373590:CDS |
| AGTGAGGATGATGAAACGGA+GGG | 0.622730 | tig0019461:-25564 | None:intergenic |
| GGCGGAGAGAGATCAAGGAG+AGG | 0.623247 | tig0019461:+25901 | Msa1373590:CDS |
| GCAGTTGGAAGTGAAGGTGG+CGG | 0.625405 | tig0019461:+25883 | Msa1373590:CDS |
| ACACGAAACGACACTGCCAT+CGG | 0.626709 | tig0019461:+25683 | Msa1373590:CDS |
| TTACTGGCCCTGCACAACAA+TGG | 0.626932 | tig0019461:-27546 | None:intergenic |
| TTTAAGTGGTGGTGTTCCGG+CGG | 0.628276 | tig0019461:+26015 | Msa1373590:CDS |
| ATGAGCAATGTGTAAAATGG+TGG | 0.634351 | tig0019461:-27686 | None:intergenic |
| TGTGCAAAATGGATCGACAA+AGG | 0.637037 | tig0019461:-25301 | None:intergenic |
| TTGGATGGTGAAGAAGATGG+TGG | 0.645396 | tig0019461:+26060 | Msa1373590:CDS |
| TGGAGGAGAGTGGTATAGGA+TGG | 0.647947 | tig0019461:+25937 | Msa1373590:CDS |
| ATCGACGATAATCACCTCGA+AGG | 0.649591 | tig0019461:+25797 | Msa1373590:CDS |
| AGTTAAAGATGTTACAGACA+TGG | 0.655695 | tig0019461:+27520 | Msa1373590:CDS |
| AAAAGAAAATAACCAAAATG+GGG | 0.656227 | tig0019461:+25390 | Msa1373590:exon |
| TGAAGCACTTCGGAGATGGG+CGG | 0.665635 | tig0019461:+26099 | Msa1373590:CDS |
| GTTGTGCTGATGAAGCACTT+CGG | 0.693143 | tig0019461:+26089 | Msa1373590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTTTTAAATCATTTAAAA+TGG | + | tig0019461:26824-26843 | Msa1373590:intron | 10.0% |
| !!! | TTTAAATCATTTAAAATGGT+TGG | + | tig0019461:26828-26847 | Msa1373590:intron | 15.0% |
| !!! | GATTTTTTAAATAGATATAG+TGG | + | tig0019461:26877-26896 | Msa1373590:intron | 15.0% |
| !!! | AATTTTAAATGTGTGCAAAA+TGG | - | tig0019461:25315-25334 | None:intergenic | 20.0% |
| !! | GAAAAGAAAATAACCAAAAT+GGG | + | tig0019461:25389-25408 | Msa1373590:exon | 20.0% |
| !! | AAAAGAAAATAACCAAAATG+GGG | + | tig0019461:25390-25409 | Msa1373590:exon | 20.0% |
| !!! | TTTTCATTGAAGAAAAAAGA+AGG | - | tig0019461:25617-25636 | None:intergenic | 20.0% |
| !! | ATATGAAGAATGGATATATA+TGG | - | tig0019461:26200-26219 | None:intergenic | 20.0% |
| !! | ACATAAGAAAATATGAAGAA+TGG | - | tig0019461:26210-26229 | None:intergenic | 20.0% |
| !!! | TAATTTTACAATTTTGACCA+TGG | + | tig0019461:26256-26275 | Msa1373590:intron | 20.0% |
| !!! | TTAGTTTAAAGTTAAAACCA+TGG | - | tig0019461:26276-26295 | None:intergenic | 20.0% |
| !! | TCTTATTGTATGTATAACTT+TGG | - | tig0019461:26782-26801 | None:intergenic | 20.0% |
| !! | ATTTATGATCAAGAATCTAA+TGG | - | tig0019461:27113-27132 | None:intergenic | 20.0% |
| !! | TCAAAGCATAAACTAAAAAT+TGG | - | tig0019461:27191-27210 | None:intergenic | 20.0% |
| !!! | AAATGTATTTCTAGTTAAAG+TGG | + | tig0019461:27210-27229 | Msa1373590:intron | 20.0% |
| !!! | AATGTATTTCTAGTTAAAGT+GGG | + | tig0019461:27211-27230 | Msa1373590:intron | 20.0% |
| !! | TACAGAGTAGTTAAATTTAT+AGG | + | tig0019461:27360-27379 | Msa1373590:intron | 20.0% |
| !! | ACATTCAAGAAATATTTAAG+TGG | - | tig0019461:27892-27911 | None:intergenic | 20.0% |
| !! | TTATGAATGGTATAAGTATA+CGG | - | tig0019461:27972-27991 | None:intergenic | 20.0% |
| !! | ACTTATACCATTCATAAATT+TGG | + | tig0019461:27975-27994 | Msa1373590:three_prime_UTR | 20.0% |
| ! | CGAAAAGAAAATAACCAAAA+TGG | + | tig0019461:25388-25407 | Msa1373590:exon | 25.0% |
| ! | AGAAAAAAGAAGGAATGAAA+CGG | - | tig0019461:25607-25626 | None:intergenic | 25.0% |
| !!! | CCAAGTAATTTTGATAAAGA+TGG | - | tig0019461:26343-26362 | None:intergenic | 25.0% |
| ! | CCATCTTTATCAAAATTACT+TGG | + | tig0019461:26340-26359 | Msa1373590:intron | 25.0% |
| ! | TAACTTTGGATATAATTTCC+CGG | - | tig0019461:26768-26787 | None:intergenic | 25.0% |
| ! | TTTATTGGCCATTATAAACT+TGG | - | tig0019461:26981-27000 | None:intergenic | 25.0% |
| ! | AATGGCCAATAAACTTATTA+TGG | + | tig0019461:26988-27007 | Msa1373590:intron | 25.0% |
| ! | ATGGCCAATAAACTTATTAT+GGG | + | tig0019461:26989-27008 | Msa1373590:intron | 25.0% |
| ! | TTGATCATAAATAACTTCCA+AGG | + | tig0019461:27121-27140 | Msa1373590:intron | 25.0% |
| ! | TAAACTAAAAATTGGATGAG+AGG | - | tig0019461:27183-27202 | None:intergenic | 25.0% |
| !!! | GTTCAAATTTAGAAGTGTTT+AGG | + | tig0019461:27264-27283 | Msa1373590:intron | 25.0% |
| !!! | AAGTTCTAAGTTATATCAAC+AGG | + | tig0019461:27866-27885 | Msa1373590:three_prime_UTR | 25.0% |
| ! | TACACTTCCAAATTTATGAA+TGG | - | tig0019461:27985-28004 | None:intergenic | 25.0% |
| !!! | CTTGCTGTTTAAGTTTAATA+TGG | + | tig0019461:28029-28048 | Msa1373590:three_prime_UTR | 25.0% |
| TCCCATTATAAAGCTAGAAA+AGG | + | tig0019461:25334-25353 | Msa1373590:five_prime_UTR | 30.0% | |
| !!! | GCCTTTTCTAGCTTTATAAT+GGG | - | tig0019461:25338-25357 | None:intergenic | 30.0% |
| !!! | TGCCTTTTCTAGCTTTATAA+TGG | - | tig0019461:25339-25358 | None:intergenic | 30.0% |
| ! | TCGTATTTTCTTGAACTAAC+TGG | - | tig0019461:25749-25768 | None:intergenic | 30.0% |
| TTTCAAACCACCTATATTCT+CGG | - | tig0019461:26366-26385 | None:intergenic | 30.0% | |
| AAAATATTAGCTCGAGAATG+TGG | + | tig0019461:26383-26402 | Msa1373590:intron | 30.0% | |
| !! | TTTTGTCTTGTTGCATTACA+AGG | - | tig0019461:26509-26528 | None:intergenic | 30.0% |
| TTTAAGCCTTTGTACTCATT+AGG | + | tig0019461:26721-26740 | Msa1373590:intron | 30.0% | |
| AACTTTGGATATAATTTCCC+GGG | - | tig0019461:26767-26786 | None:intergenic | 30.0% | |
| TCTTGTCTCCAAGTTTATAA+TGG | + | tig0019461:26970-26989 | Msa1373590:intron | 30.0% | |
| TGGCCAATAAACTTATTATG+GGG | + | tig0019461:26990-27009 | Msa1373590:intron | 30.0% | |
| AAGCCCCATAATAAGTTTAT+TGG | - | tig0019461:26996-27015 | None:intergenic | 30.0% | |
| TAAATAACTTCCAAGGATTG+TGG | + | tig0019461:27128-27147 | Msa1373590:intron | 30.0% | |
| TTTGAACCACTATGAAGTAT+TGG | - | tig0019461:27251-27270 | None:intergenic | 30.0% | |
| GCGAACATTAAAGATATCAT+AGG | - | tig0019461:27394-27413 | None:intergenic | 30.0% | |
| ! | TTCAAAGAAGCCAAAGATTT+TGG | + | tig0019461:27450-27469 | Msa1373590:CDS | 30.0% |
| AGTTAAAGATGTTACAGACA+TGG | + | tig0019461:27520-27539 | Msa1373590:CDS | 30.0% | |
| !! | ATGTTGGAAAGCATTATAGA+GGG | + | tig0019461:27621-27640 | Msa1373590:CDS | 30.0% |
| GAATGTCAAAGAACTATCAT+AGG | + | tig0019461:27906-27925 | Msa1373590:three_prime_UTR | 30.0% | |
| !! | GGTTATTTTCTTTTCGTACG+CGG | - | tig0019461:25384-25403 | None:intergenic | 35.0% |
| AGAAAGTGAGGATGATGAAA+CGG | - | tig0019461:25571-25590 | None:intergenic | 35.0% | |
| AAAAAGAAGGAATGAAACGG+AGG | - | tig0019461:25604-25623 | None:intergenic | 35.0% | |
| ! | GAACTTATTCTGCGTTTTGA+TGG | - | tig0019461:25654-25673 | None:intergenic | 35.0% |
| TTGCTTTGTCTTCAGCATTT+GGG | + | tig0019461:25849-25868 | Msa1373590:CDS | 35.0% | |
| AATTACTTGGCCGAGAATAT+AGG | + | tig0019461:26353-26372 | Msa1373590:intron | 35.0% | |
| !! | TTGGAAAATTTCTGAGGCAA+AGG | + | tig0019461:26417-26436 | Msa1373590:intron | 35.0% |
| TCCAACTTGTAATTCTAGCA+AGG | + | tig0019461:26538-26557 | Msa1373590:intron | 35.0% | |
| CCAACTTGTAATTCTAGCAA+GGG | + | tig0019461:26539-26558 | Msa1373590:intron | 35.0% | |
| ! | ATAGTAGCTTTTGACACCAA+AGG | + | tig0019461:26669-26688 | Msa1373590:intron | 35.0% |
| TTAAGACAAATCGTTGCCTT+TGG | - | tig0019461:26688-26707 | None:intergenic | 35.0% | |
| CTAATGCCTAATGAGTACAA+AGG | - | tig0019461:26730-26749 | None:intergenic | 35.0% | |
| ! | TTAGATTAGACTAGTTGTCC+CGG | + | tig0019461:26746-26765 | Msa1373590:intron | 35.0% |
| ATGACTCCAATACTTCATAG+TGG | + | tig0019461:27242-27261 | Msa1373590:intron | 35.0% | |
| !! | GATGTTGGAAAGCATTATAG+AGG | + | tig0019461:27620-27639 | Msa1373590:CDS | 35.0% |
| !! | TGTTGGAAAGCATTATAGAG+GGG | + | tig0019461:27622-27641 | Msa1373590:CDS | 35.0% |
| AAGAACAGGTTCTTTCTCTT+TGG | + | tig0019461:27661-27680 | Msa1373590:CDS | 35.0% | |
| ATGAGCAATGTGTAAAATGG+TGG | - | tig0019461:27689-27708 | None:intergenic | 35.0% | |
| AGGATGAGCAATGTGTAAAA+TGG | - | tig0019461:27692-27711 | None:intergenic | 35.0% | |
| TGTGCAAAATGGATCGACAA+AGG | - | tig0019461:25304-25323 | None:intergenic | 40.0% | |
| AAAGGGAAGAGATTAGGGTT+CGG | - | tig0019461:25475-25494 | None:intergenic | 40.0% | |
| GGTGAAAAGGGAAGAGATTA+GGG | - | tig0019461:25480-25499 | None:intergenic | 40.0% | |
| TGGTGAAAAGGGAAGAGATT+AGG | - | tig0019461:25481-25500 | None:intergenic | 40.0% | |
| GAGTTTGTAGTTGACAGAGA+AGG | - | tig0019461:25537-25556 | None:intergenic | 40.0% | |
| !! | CTTATTCTGCGTTTTGATGG+TGG | - | tig0019461:25651-25670 | None:intergenic | 40.0% |
| ! | GTTGCTTTGTCTTCAGCATT+TGG | + | tig0019461:25848-25867 | Msa1373590:CDS | 40.0% |
| TTTGTCTTCAGCATTTGGGA+GGG | + | tig0019461:25853-25872 | Msa1373590:CDS | 40.0% | |
| ! | GGTAGGTTGGAAAATTTCTG+AGG | + | tig0019461:26411-26430 | Msa1373590:intron | 40.0% |
| !! | GAAAATTTCTGAGGCAAAGG+AGG | + | tig0019461:26420-26439 | Msa1373590:intron | 40.0% |
| GCAAAGGAGGAAAGATGATA+AGG | + | tig0019461:26433-26452 | Msa1373590:intron | 40.0% | |
| CACTTTGTCAAAGCTGTTTG+TGG | + | tig0019461:26472-26491 | Msa1373590:intron | 40.0% | |
| CCCTTGCTAGAATTACAAGT+TGG | - | tig0019461:26542-26561 | None:intergenic | 40.0% | |
| ! | TAGATTAGACTAGTTGTCCC+GGG | + | tig0019461:26747-26766 | Msa1373590:intron | 40.0% |
| TTTCAGTCACAGCAACATTC+TGG | + | tig0019461:26942-26961 | Msa1373590:intron | 40.0% | |
| GAGAGGTAACTCTTCATTCT+AGG | - | tig0019461:27166-27185 | None:intergenic | 40.0% | |
| CTTTGAACAGAAATGCTGCT+TGG | - | tig0019461:27437-27456 | None:intergenic | 40.0% | |
| GCATAACATGATTGGAGGTT+TGG | - | tig0019461:27723-27742 | None:intergenic | 40.0% | |
| ACAACTACTAGAGCTGAAGT+TGG | - | tig0019461:27843-27862 | None:intergenic | 40.0% | |
| AGCATATCAAGCCACTATGT+TGG | + | tig0019461:28004-28023 | Msa1373590:three_prime_UTR | 40.0% | |
| AACAGCAAGAACCAACATAG+TGG | - | tig0019461:28018-28037 | None:intergenic | 40.0% | |
| TGGATCGACAAAGGTAGACT+TGG | - | tig0019461:25295-25314 | None:intergenic | 45.0% | |
| ! | TTTCGCGTTCTTCCCCATTT+TGG | - | tig0019461:25405-25424 | None:intergenic | 45.0% |
| AAGAACGCGAAAAACACGGA+CGG | + | tig0019461:25413-25432 | Msa1373590:CDS | 45.0% | |
| !!! | GAAGGTGGTGGTTTTGTCAA+CGG | - | tig0019461:25510-25529 | None:intergenic | 45.0% |
| TGTAGTTGACAGAGAAGGAG+AGG | - | tig0019461:25532-25551 | None:intergenic | 45.0% | |
| AGTGAGGATGATGAAACGGA+GGG | - | tig0019461:25567-25586 | None:intergenic | 45.0% | |
| AAGTGAGGATGATGAAACGG+AGG | - | tig0019461:25568-25587 | None:intergenic | 45.0% | |
| AAGAAGGAATGAAACGGAGG+AGG | - | tig0019461:25601-25620 | None:intergenic | 45.0% | |
| CGAAGCAGTTCGATCGTTAA+CGG | + | tig0019461:25766-25785 | Msa1373590:CDS | 45.0% | |
| ATCGACGATAATCACCTCGA+AGG | + | tig0019461:25797-25816 | Msa1373590:CDS | 45.0% | |
| GTAACGAATGAACACCTTCG+AGG | - | tig0019461:25814-25833 | None:intergenic | 45.0% | |
| CTTTGTCTTCAGCATTTGGG+AGG | + | tig0019461:25852-25871 | Msa1373590:CDS | 45.0% | |
| ! | TGGTTTAAGTGGTGGTGTTC+CGG | + | tig0019461:26012-26031 | Msa1373590:CDS | 45.0% |
| GGTTTGGATGGTGAAGAAGA+TGG | + | tig0019461:26057-26076 | Msa1373590:CDS | 45.0% | |
| TTGGATGGTGAAGAAGATGG+TGG | + | tig0019461:26060-26079 | Msa1373590:CDS | 45.0% | |
| ! | GTTGTGCTGATGAAGCACTT+CGG | + | tig0019461:26089-26108 | Msa1373590:CDS | 45.0% |
| ! | TGATGAAGCACTTCGGAGAT+GGG | + | tig0019461:26096-26115 | Msa1373590:CDS | 45.0% |
| ! | GCTTCGCTTGTTAAACTTGC+AGG | + | tig0019461:26172-26191 | Msa1373590:CDS | 45.0% |
| TACTTGGCCGAGAATATAGG+TGG | + | tig0019461:26356-26375 | Msa1373590:intron | 45.0% | |
| TTCGTCTGCGCCAAAATCTT+TGG | - | tig0019461:27463-27482 | None:intergenic | 45.0% | |
| ! | TTTTGGCGCAGACGAAATTG+AGG | + | tig0019461:27467-27486 | Msa1373590:CDS | 45.0% |
| CAAGATGAAGCAATGCATGC+AGG | + | tig0019461:27494-27513 | Msa1373590:CDS | 45.0% | |
| TCTCATTGATGCTCAATGCC+GGG | - | tig0019461:27584-27603 | None:intergenic | 45.0% | |
| CTCTCATTGATGCTCAATGC+CGG | - | tig0019461:27585-27604 | None:intergenic | 45.0% | |
| ! | GGCATTGAGCATCAATGAGA+GGG | + | tig0019461:27584-27603 | Msa1373590:CDS | 45.0% |
| !! | GGAAAGCATTATAGAGGGGT+TGG | + | tig0019461:27626-27645 | Msa1373590:CDS | 45.0% |
| GGAACAAGAGAAGCAAGAAC+AGG | + | tig0019461:27647-27666 | Msa1373590:CDS | 45.0% | |
| AGCGAGCATAACATGATTGG+AGG | - | tig0019461:27728-27747 | None:intergenic | 45.0% | |
| TCCAATCATGTTATGCTCGC+TGG | + | tig0019461:27727-27746 | Msa1373590:CDS | 45.0% | |
| ACCAGCGAGCATAACATGAT+TGG | - | tig0019461:27731-27750 | None:intergenic | 45.0% | |
| GGGGAAGAACGCGAAAAACA+CGG | + | tig0019461:25409-25428 | Msa1373590:CDS | 50.0% | |
| GTTGACAGAGAAGGAGAGGA+AGG | - | tig0019461:25528-25547 | None:intergenic | 50.0% | |
| GGATGATGAAACGGAGGGTT+TGG | - | tig0019461:25562-25581 | None:intergenic | 50.0% | |
| GGAGGAAGAGGTAGAAAGTG+AGG | - | tig0019461:25583-25602 | None:intergenic | 50.0% | |
| GAATGAAACGGAGGAGGAAG+AGG | - | tig0019461:25595-25614 | None:intergenic | 50.0% | |
| ACACGAAACGACACTGCCAT+CGG | + | tig0019461:25683-25702 | Msa1373590:CDS | 50.0% | |
| GTTGAGGCAGTTGGAAGTGA+AGG | + | tig0019461:25877-25896 | Msa1373590:CDS | 50.0% | |
| GATCAAGGAGAGGGTGAAGA+AGG | + | tig0019461:25911-25930 | Msa1373590:CDS | 50.0% | |
| !! | AAGAAGGTGATGGAGGAGAG+TGG | + | tig0019461:25927-25946 | Msa1373590:CDS | 50.0% |
| ! | GTGATGGAGGAGAGTGGTAT+AGG | + | tig0019461:25933-25952 | Msa1373590:CDS | 50.0% |
| TGGAGGAGAGTGGTATAGGA+TGG | + | tig0019461:25937-25956 | Msa1373590:CDS | 50.0% | |
| GAGAGTGGTATAGGATGGTG+AGG | + | tig0019461:25942-25961 | Msa1373590:CDS | 50.0% | |
| AGTGGTATAGGATGGTGAGG+AGG | + | tig0019461:25945-25964 | Msa1373590:CDS | 50.0% | |
| GTATAGGATGGTGAGGAGGA+GGG | + | tig0019461:25949-25968 | Msa1373590:CDS | 50.0% | |
| ! | TTTAAGTGGTGGTGTTCCGG+CGG | + | tig0019461:26015-26034 | Msa1373590:CDS | 50.0% |
| ! | AATTGGCAGCGGAGTTGGTT+TGG | + | tig0019461:26041-26060 | Msa1373590:CDS | 50.0% |
| !! | GTGAAGAAGATGGTGGAGTG+TGG | + | tig0019461:26067-26086 | Msa1373590:CDS | 50.0% |
| ! | CTGATGAAGCACTTCGGAGA+TGG | + | tig0019461:26095-26114 | Msa1373590:CDS | 50.0% |
| TACTGCTGATCCTCGTTTGC+AGG | + | tig0019461:26150-26169 | Msa1373590:CDS | 50.0% | |
| TAGCTCGAGAATGTGGACGT+AGG | + | tig0019461:26390-26409 | Msa1373590:intron | 50.0% | |
| TCGAGAATGTGGACGTAGGT+AGG | + | tig0019461:26394-26413 | Msa1373590:intron | 50.0% | |
| GAATGTGGACGTAGGTAGGT+TGG | + | tig0019461:26398-26417 | Msa1373590:intron | 50.0% | |
| TGCAGAGAGACCACAATCCT+TGG | - | tig0019461:27141-27160 | None:intergenic | 50.0% | |
| ATGGCTGCCATTGTTGTGCA+GGG | + | tig0019461:27539-27558 | Msa1373590:CDS | 50.0% | |
| TTACTGGCCCTGCACAACAA+TGG | - | tig0019461:27549-27568 | None:intergenic | 50.0% | |
| TTGTTGTGCAGGGCCAGTAA+TGG | + | tig0019461:27549-27568 | Msa1373590:CDS | 50.0% | |
| !! | CAGTAATGGCATTGATGCCC+CGG | + | tig0019461:27563-27582 | Msa1373590:CDS | 50.0% |
| CTCATTGATGCTCAATGCCG+GGG | - | tig0019461:27583-27602 | None:intergenic | 50.0% | |
| ! | CGGCATTGAGCATCAATGAG+AGG | + | tig0019461:27583-27602 | Msa1373590:CDS | 50.0% |
| CATCAATGAGAGGGCTGAGT+TGG | + | tig0019461:27593-27612 | Msa1373590:CDS | 50.0% | |
| CACATTGCTCATCCTCTGAC+TGG | + | tig0019461:27697-27716 | Msa1373590:CDS | 50.0% | |
| AACGCGAAAAACACGGACGG+CGG | + | tig0019461:25416-25435 | Msa1373590:CDS | 55.0% | |
| GAGATTAGGGTTCGGAGGAG+CGG | - | tig0019461:25467-25486 | None:intergenic | 55.0% | |
| GGGAAGAGATTAGGGTTCGG+AGG | - | tig0019461:25472-25491 | None:intergenic | 55.0% | |
| ! | AACGGCGGTGGTGGTGAAAA+GGG | - | tig0019461:25492-25511 | None:intergenic | 55.0% |
| !!! | GGTGGTGGTTTTGTCAACGG+CGG | - | tig0019461:25507-25526 | None:intergenic | 55.0% |
| AGAGAAGGAGAGGAAGGTGG+TGG | - | tig0019461:25522-25541 | None:intergenic | 55.0% | |
| GACAGAGAAGGAGAGGAAGG+TGG | - | tig0019461:25525-25544 | None:intergenic | 55.0% | |
| ! | CTGAGAAAGAGCACGTCCGA+TGG | - | tig0019461:25702-25721 | None:intergenic | 55.0% |
| GAGGCAGTTGGAAGTGAAGG+TGG | + | tig0019461:25880-25899 | Msa1373590:CDS | 55.0% | |
| GCAGTTGGAAGTGAAGGTGG+CGG | + | tig0019461:25883-25902 | Msa1373590:CDS | 55.0% | |
| !! | AAGGTGGCGGAGAGAGATCA+AGG | + | tig0019461:25896-25915 | Msa1373590:CDS | 55.0% |
| GCGGAGAGAGATCAAGGAGA+GGG | + | tig0019461:25902-25921 | Msa1373590:CDS | 55.0% | |
| GGAGAGGGTGAAGAAGGTGA+TGG | + | tig0019461:25917-25936 | Msa1373590:CDS | 55.0% | |
| ! | GAGGGTGAAGAAGGTGATGG+AGG | + | tig0019461:25920-25939 | Msa1373590:CDS | 55.0% |
| GGTATAGGATGGTGAGGAGG+AGG | + | tig0019461:25948-25967 | Msa1373590:CDS | 55.0% | |
| TGGAAGGTGAAGGGAGGTGA+GGG | + | tig0019461:25989-26008 | Msa1373590:CDS | 55.0% | |
| GGAGGTGAGGGTGGTTTAAG+TGG | + | tig0019461:26001-26020 | Msa1373590:CDS | 55.0% | |
| GGTGAGGGTGGTTTAAGTGG+TGG | + | tig0019461:26004-26023 | Msa1373590:CDS | 55.0% | |
| TGGTGTTCCGGCGGAGAAAT+TGG | + | tig0019461:26024-26043 | Msa1373590:CDS | 55.0% | |
| GGAGAAATTGGCAGCGGAGT+TGG | + | tig0019461:26036-26055 | Msa1373590:CDS | 55.0% | |
| ! | TGAAGCACTTCGGAGATGGG+CGG | + | tig0019461:26099-26118 | Msa1373590:CDS | 55.0% |
| !! | TGGGCGGTGGCGGATAATTT+AGG | + | tig0019461:26115-26134 | Msa1373590:CDS | 55.0% |
| !! | GGGCGGTGGCGGATAATTTA+GGG | + | tig0019461:26116-26135 | Msa1373590:CDS | 55.0% |
| ACAAGCGAAGCCTGCAAACG+AGG | - | tig0019461:26163-26182 | None:intergenic | 55.0% | |
| CATGGCTGCCATTGTTGTGC+AGG | + | tig0019461:27538-27557 | Msa1373590:CDS | 55.0% | |
| ! | CGGGGCATCAATGCCATTAC+TGG | - | tig0019461:27565-27584 | None:intergenic | 55.0% |
| ! | ATGAGAGGGCTGAGTTGGAG+AGG | + | tig0019461:27598-27617 | Msa1373590:CDS | 55.0% |
| ! | GGCTGAGTTGGAGAGGATGT+TGG | + | tig0019461:27605-27624 | Msa1373590:CDS | 55.0% |
| TTGGAGGTTTGGCCAGTCAG+AGG | - | tig0019461:27712-27731 | None:intergenic | 55.0% | |
| ATTAGGGTTCGGAGGAGCGG+CGG | - | tig0019461:25464-25483 | None:intergenic | 60.0% | |
| ! | CAACGGCGGTGGTGGTGAAA+AGG | - | tig0019461:25493-25512 | None:intergenic | 60.0% |
| !! | GGTTTTGTCAACGGCGGTGG+TGG | - | tig0019461:25501-25520 | None:intergenic | 60.0% |
| !!! | GGTGGTTTTGTCAACGGCGG+TGG | - | tig0019461:25504-25523 | None:intergenic | 60.0% |
| !! | CAGCATTTGGGAGGGCGTTG+AGG | + | tig0019461:25861-25880 | Msa1373590:CDS | 60.0% |
| GGCGGAGAGAGATCAAGGAG+AGG | + | tig0019461:25901-25920 | Msa1373590:CDS | 60.0% | |
| ! | GTGGTGGGGTGGAAGGTGAA+GGG | + | tig0019461:25980-25999 | Msa1373590:CDS | 60.0% |
| GTGGAAGGTGAAGGGAGGTG+AGG | + | tig0019461:25988-26007 | Msa1373590:CDS | 60.0% | |
| AAGGTGAAGGGAGGTGAGGG+TGG | + | tig0019461:25992-26011 | Msa1373590:CDS | 60.0% | |
| TCCGGCGGAGAAATTGGCAG+CGG | + | tig0019461:26030-26049 | Msa1373590:CDS | 60.0% | |
| TCCGCTGCCAATTTCTCCGC+CGG | - | tig0019461:26034-26053 | None:intergenic | 60.0% | |
| !! | GGCAGCGGAGTTGGTTTGGA+TGG | + | tig0019461:26045-26064 | Msa1373590:CDS | 60.0% |
| GCGAAAAACACGGACGGCGG+CGG | + | tig0019461:25419-25438 | Msa1373590:CDS | 65.0% | |
| !! | CGGCGGAAGTGGTAGTGGCA+TGG | - | tig0019461:25447-25466 | None:intergenic | 65.0% |
| AGGAGCGGCGGAAGTGGTAG+TGG | - | tig0019461:25452-25471 | None:intergenic | 65.0% | |
| !! | TGGGAGGGCGTTGAGGCAGT+TGG | + | tig0019461:25868-25887 | Msa1373590:CDS | 65.0% |
| GGATGGTGAGGAGGAGGGTG+TGG | + | tig0019461:25954-25973 | Msa1373590:CDS | 65.0% | |
| ! | TGGTGAGGAGGAGGGTGTGG+AGG | + | tig0019461:25957-25976 | Msa1373590:CDS | 65.0% |
| ! | GGTGAGGAGGAGGGTGTGGA+GGG | + | tig0019461:25958-25977 | Msa1373590:CDS | 65.0% |
| ! | AGGAGGGTGTGGAGGGTGGT+GGG | + | tig0019461:25965-25984 | Msa1373590:CDS | 65.0% |
| !! | GGTGGTGGGGTGGAAGGTGA+AGG | + | tig0019461:25979-25998 | Msa1373590:CDS | 65.0% |
| GTGGGGTGGAAGGTGAAGGG+AGG | + | tig0019461:25983-26002 | Msa1373590:CDS | 65.0% | |
| AGCACTTCGGAGATGGGCGG+TGG | + | tig0019461:26102-26121 | Msa1373590:CDS | 65.0% | |
| ACTTCGGAGATGGGCGGTGG+CGG | + | tig0019461:26105-26124 | Msa1373590:CDS | 65.0% | |
| GTTCGGAGGAGCGGCGGAAG+TGG | - | tig0019461:25458-25477 | None:intergenic | 70.0% | |
| ! | GAGGAGGAGGGTGTGGAGGG+TGG | + | tig0019461:25961-25980 | Msa1373590:CDS | 70.0% |
| ! | GAGGAGGGTGTGGAGGGTGG+TGG | + | tig0019461:25964-25983 | Msa1373590:CDS | 70.0% |
| ! | GGAGGGTGTGGAGGGTGGTG+GGG | + | tig0019461:25966-25985 | Msa1373590:CDS | 70.0% |
| !! | GTGGAGGGTGGTGGGGTGGA+AGG | + | tig0019461:25973-25992 | Msa1373590:CDS | 70.0% |
| !! | GGGTGTGGAGGGTGGTGGGG+TGG | + | tig0019461:25969-25988 | Msa1373590:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019461 | gene | 25291 | 28057 | 25291 | ID=Msa1373590;Name=Msa1373590 |
| tig0019461 | mRNA | 25291 | 28057 | 25291 | ID=Msa1373590-mRNA-1;Parent=Msa1373590;Name=Msa1373590-mRNA-1;_AED=0.01;_eAED=0.01;_QI=116|1|1|1|1|1|2|263|379 |
| tig0019461 | exon | 25291 | 26193 | 25291 | ID=Msa1373590-mRNA-1:exon:3395;Parent=Msa1373590-mRNA-1 |
| tig0019461 | exon | 27442 | 28057 | 27442 | ID=Msa1373590-mRNA-1:exon:3396;Parent=Msa1373590-mRNA-1 |
| tig0019461 | five_prime_UTR | 25291 | 25406 | 25291 | ID=Msa1373590-mRNA-1:five_prime_utr;Parent=Msa1373590-mRNA-1 |
| tig0019461 | CDS | 25407 | 26193 | 25407 | ID=Msa1373590-mRNA-1:cds;Parent=Msa1373590-mRNA-1 |
| tig0019461 | CDS | 27442 | 27794 | 27442 | ID=Msa1373590-mRNA-1:cds;Parent=Msa1373590-mRNA-1 |
| tig0019461 | three_prime_UTR | 27795 | 28057 | 27795 | ID=Msa1373590-mRNA-1:three_prime_utr;Parent=Msa1373590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
