Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648860 | XP_003607512.1 | 96.203 | 79 | 3 | 0 | 1 | 79 | 1 | 79 | 7.92e-45 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648860 | sp|Q1G309|TAX2_ARATH | 61.972 | 71 | 27 | 0 | 9 | 79 | 3 | 73 | 2.71e-20 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648860 | G7JTY0 | 96.203 | 79 | 3 | 0 | 1 | 79 | 1 | 79 | 3.78e-45 | 149 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010890 | Msa0648860 | 0.803038 | 4.217664e-49 | -8.615850e-47 |
| Msa0038720 | Msa0648860 | 0.817392 | 3.377291e-52 | -8.615850e-47 |
| Msa0054260 | Msa0648860 | 0.840594 | 7.917266e-58 | -8.615850e-47 |
| Msa0054310 | Msa0648860 | 0.829867 | 4.047390e-55 | -8.615850e-47 |
| Msa0085280 | Msa0648860 | 0.802229 | 6.193554e-49 | -8.615850e-47 |
| Msa0085290 | Msa0648860 | 0.819149 | 1.351311e-52 | -8.615850e-47 |
| Msa0090570 | Msa0648860 | 0.804458 | 2.139480e-49 | -8.615850e-47 |
| Msa0100080 | Msa0648860 | 0.827197 | 1.786886e-54 | -8.615850e-47 |
| Msa0100090 | Msa0648860 | 0.864908 | 8.668175e-65 | -8.615850e-47 |
| Msa0105070 | Msa0648860 | 0.824456 | 7.994666e-54 | -8.615850e-47 |
| Msa0615220 | Msa0648860 | 0.804280 | 2.330484e-49 | -8.615850e-47 |
| Msa0620960 | Msa0648860 | 0.802097 | 6.593444e-49 | -8.615850e-47 |
| Msa0648860 | Msa0654010 | 0.802989 | 4.317429e-49 | -8.615850e-47 |
| Msa0648860 | Msa0661650 | 0.812607 | 3.894225e-51 | -8.615850e-47 |
| Msa0648860 | Msa0673460 | 0.835288 | 1.830913e-56 | -8.615850e-47 |
| Msa0648860 | Msa0688070 | 0.802396 | 5.722359e-49 | -8.615850e-47 |
| Msa0648860 | Msa0689010 | 0.810822 | 9.521500e-51 | -8.615850e-47 |
| Msa0648860 | Msa0693380 | 0.819964 | 8.809262e-53 | -8.615850e-47 |
| Msa0648860 | Msa0715410 | 0.806508 | 7.951000e-50 | -8.615850e-47 |
| Msa0648860 | Msa0731180 | 0.825890 | 3.661809e-54 | -8.615850e-47 |
| Msa0648860 | Msa0756320 | 0.806150 | 9.460477e-50 | -8.615850e-47 |
| Msa0648860 | Msa0760130 | 0.800736 | 1.253248e-48 | -8.615850e-47 |
| Msa0648860 | Msa0760440 | 0.826359 | 2.833521e-54 | -8.615850e-47 |
| Msa0648860 | Msa0771580 | 0.819604 | 1.064573e-52 | -8.615850e-47 |
| Msa0648860 | Msa0801780 | 0.822745 | 2.010057e-53 | -8.615850e-47 |
| Msa0648860 | Msa0820850 | 0.800949 | 1.133667e-48 | -8.615850e-47 |
| Msa0648860 | Msa0825870 | 0.821384 | 4.155471e-53 | -8.615850e-47 |
| Msa0648860 | Msa0830230 | 0.802162 | 6.393509e-49 | -8.615850e-47 |
| Msa0648860 | Msa0842650 | 0.846851 | 1.675553e-59 | -8.615850e-47 |
| Msa0648860 | Msa0843260 | 0.807083 | 6.011062e-50 | -8.615850e-47 |
| Msa0648860 | Msa0857640 | 0.806498 | 7.988019e-50 | -8.615850e-47 |
| Msa0648860 | Msa0862820 | 0.807570 | 4.738046e-50 | -8.615850e-47 |
| Msa0648860 | Msa0888260 | 0.808586 | 2.879227e-50 | -8.615850e-47 |
| Msa0648860 | Msa0907070 | 0.822331 | 2.508914e-53 | -8.615850e-47 |
| Msa0648860 | Msa0927380 | 0.802834 | 4.649242e-49 | -8.615850e-47 |
| Msa0648860 | Msa0932100 | 0.824207 | 9.148122e-54 | -8.615850e-47 |
| Msa0648860 | Msa0932190 | 0.813870 | 2.056385e-51 | -8.615850e-47 |
| Msa0648860 | Msa0935910 | 0.804236 | 2.380431e-49 | -8.615850e-47 |
| Msa0648860 | Msa0939250 | 0.821196 | 4.592433e-53 | -8.615850e-47 |
| Msa0648860 | Msa0943190 | 0.812927 | 3.313262e-51 | -8.615850e-47 |
| Msa0648860 | Msa0947760 | 0.806050 | 9.929379e-50 | -8.615850e-47 |
| Msa0648860 | Msa0953120 | 0.801711 | 7.914391e-49 | -8.615850e-47 |
| Msa0648860 | Msa0970230 | 0.824360 | 8.421040e-54 | -8.615850e-47 |
| Msa0648860 | Msa0973600 | 0.838278 | 3.162236e-57 | -8.615850e-47 |
| Msa0648860 | Msa0975220 | 0.803863 | 2.845537e-49 | -8.615850e-47 |
| Msa0648860 | Msa1007230 | 0.800031 | 1.743676e-48 | -8.615850e-47 |
| Msa0648860 | Msa1014990 | 0.819456 | 1.150267e-52 | -8.615850e-47 |
| Msa0648860 | Msa1039710 | -0.805118 | 1.557501e-49 | -8.615850e-47 |
| Msa0648860 | Msa1052330 | 0.835197 | 1.930193e-56 | -8.615850e-47 |
| Msa0648860 | Msa1082500 | 0.824768 | 6.749447e-54 | -8.615850e-47 |
| Msa0648860 | Msa1087990 | 0.810872 | 9.288110e-51 | -8.615850e-47 |
| Msa0648860 | Msa1089940 | 0.808504 | 2.997522e-50 | -8.615850e-47 |
| Msa0648860 | Msa1121490 | 0.810113 | 1.354233e-50 | -8.615850e-47 |
| Msa0648860 | Msa1131220 | 0.800416 | 1.456420e-48 | -8.615850e-47 |
| Msa0648860 | Msa1136130 | 0.803060 | 4.175004e-49 | -8.615850e-47 |
| Msa0648860 | Msa1162550 | -0.801715 | 7.899863e-49 | -8.615850e-47 |
| Msa0648860 | Msa1186950 | -0.802017 | 6.848964e-49 | -8.615850e-47 |
| Msa0648860 | Msa1198770 | 0.816543 | 5.238264e-52 | -8.615850e-47 |
| Msa0648860 | Msa1201200 | 0.816003 | 6.917372e-52 | -8.615850e-47 |
| Msa0648860 | Msa1224480 | 0.804379 | 2.221877e-49 | -8.615850e-47 |
| Msa0648860 | Msa1238330 | 0.800715 | 1.265354e-48 | -8.615850e-47 |
| Msa0648860 | Msa1244250 | 0.807192 | 5.698968e-50 | -8.615850e-47 |
| Msa0648860 | Msa1246700 | 0.801480 | 8.827415e-49 | -8.615850e-47 |
| Msa0648860 | Msa1249490 | 0.830064 | 3.624096e-55 | -8.615850e-47 |
| Msa0648860 | Msa1252260 | 0.818202 | 2.216935e-52 | -8.615850e-47 |
| Msa0648860 | Msa1284680 | 0.805539 | 1.271095e-49 | -8.615850e-47 |
| Msa0648860 | Msa1292990 | 0.805342 | 1.398385e-49 | -8.615850e-47 |
| Msa0648860 | Msa1304890 | -0.800681 | 1.285909e-48 | -8.615850e-47 |
| Msa0648860 | Msa1305340 | 0.800340 | 1.509269e-48 | -8.615850e-47 |
| Msa0648860 | Msa1311340 | 0.800770 | 1.233106e-48 | -8.615850e-47 |
| Msa0648860 | Msa1355890 | 0.807066 | 6.061879e-50 | -8.615850e-47 |
| Msa0648860 | Msa1362880 | 0.808138 | 3.587610e-50 | -8.615850e-47 |
| Msa0648860 | Msa1365270 | 0.804766 | 1.845279e-49 | -8.615850e-47 |
| Msa0648860 | Msa1378040 | 0.831649 | 1.481262e-55 | -8.615850e-47 |
| Msa0648860 | Msa1381960 | 0.820789 | 5.695488e-53 | -8.615850e-47 |
| Msa0648860 | Msa1394380 | 0.825723 | 4.012620e-54 | -8.615850e-47 |
| Msa0648860 | Msa1408340 | 0.822379 | 2.444503e-53 | -8.615850e-47 |
| Msa0648860 | Msa1414520 | 0.807343 | 5.294597e-50 | -8.615850e-47 |
| Msa0648860 | Msa1419960 | 0.816115 | 6.531361e-52 | -8.615850e-47 |
| Msa0648860 | Msa1424750 | 0.825303 | 5.044845e-54 | -8.615850e-47 |
| Msa0648860 | Msa1427230 | 0.811580 | 6.519550e-51 | -8.615850e-47 |
| Msa0648860 | Msa1435160 | 0.804764 | 1.847162e-49 | -8.615850e-47 |
| Msa0648860 | Msa1435270 | 0.805273 | 1.445460e-49 | -8.615850e-47 |
| Msa0648860 | Msa1436480 | 0.804933 | 1.702675e-49 | -8.615850e-47 |
| Msa0648860 | Msa1460800 | 0.817339 | 3.470615e-52 | -8.615850e-47 |
| Msa0648860 | Msa1460830 | 0.811406 | 7.113307e-51 | -8.615850e-47 |
| Msa0127800 | Msa0648860 | 0.813446 | 2.548706e-51 | -8.615850e-47 |
| Msa0141250 | Msa0648860 | 0.826190 | 3.108312e-54 | -8.615850e-47 |
| Msa0148720 | Msa0648860 | 0.802977 | 4.342793e-49 | -8.615850e-47 |
| Msa0197660 | Msa0648860 | 0.848260 | 6.863077e-60 | -8.615850e-47 |
| Msa0200850 | Msa0648860 | 0.847335 | 1.234397e-59 | -8.615850e-47 |
| Msa0212310 | Msa0648860 | 0.804066 | 2.581559e-49 | -8.615850e-47 |
| Msa0223010 | Msa0648860 | 0.803485 | 3.407932e-49 | -8.615850e-47 |
| Msa0233300 | Msa0648860 | 0.807894 | 4.043400e-50 | -8.615850e-47 |
| Msa0365780 | Msa0648860 | 0.854468 | 1.206631e-61 | -8.615850e-47 |
| Msa0417330 | Msa0648860 | 0.802181 | 6.337050e-49 | -8.615850e-47 |
| Msa0428080 | Msa0648860 | 0.829744 | 4.335926e-55 | -8.615850e-47 |
| Msa0434180 | Msa0648860 | 0.805565 | 1.255673e-49 | -8.615850e-47 |
| Msa0455760 | Msa0648860 | 0.803003 | 4.289931e-49 | -8.615850e-47 |
| Msa0458720 | Msa0648860 | 0.807467 | 4.983556e-50 | -8.615850e-47 |
| Msa0479340 | Msa0648860 | 0.836565 | 8.688092e-57 | -8.615850e-47 |
| Msa0239800 | Msa0648860 | 0.839146 | 1.886656e-57 | -8.615850e-47 |
| Msa0243480 | Msa0648860 | 0.842237 | 2.922601e-58 | -8.615850e-47 |
| Msa0244140 | Msa0648860 | 0.823651 | 1.234966e-53 | -8.615850e-47 |
| Msa0244190 | Msa0648860 | 0.824369 | 8.377344e-54 | -8.615850e-47 |
| Msa0269810 | Msa0648860 | 0.831672 | 1.461690e-55 | -8.615850e-47 |
| Msa0277820 | Msa0648860 | 0.824482 | 7.882997e-54 | -8.615850e-47 |
| Msa0281930 | Msa0648860 | 0.834764 | 2.481600e-56 | -8.615850e-47 |
| Msa0305190 | Msa0648860 | 0.805981 | 1.026570e-49 | -8.615850e-47 |
| Msa0315290 | Msa0648860 | 0.802207 | 6.258729e-49 | -8.615850e-47 |
| Msa0317510 | Msa0648860 | 0.843866 | 1.076676e-58 | -8.615850e-47 |
| Msa0321080 | Msa0648860 | 0.857401 | 1.673812e-62 | -8.615850e-47 |
| Msa0339620 | Msa0648860 | 0.806235 | 9.077911e-50 | -8.615850e-47 |
| Msa0340450 | Msa0648860 | 0.815251 | 1.017589e-51 | -8.615850e-47 |
| Msa0340690 | Msa0648860 | 0.803723 | 3.042385e-49 | -8.615850e-47 |
| Msa0340710 | Msa0648860 | 0.809062 | 2.278151e-50 | -8.615850e-47 |
| Msa0344910 | Msa0648860 | 0.803314 | 3.698680e-49 | -8.615850e-47 |
| Msa0349360 | Msa0648860 | 0.801130 | 1.041313e-48 | -8.615850e-47 |
| Msa0357760 | Msa0648860 | 0.808011 | 3.819011e-50 | -8.615850e-47 |
| Msa0357790 | Msa0648860 | 0.812280 | 4.589814e-51 | -8.615850e-47 |
| Msa0357830 | Msa0648860 | 0.824473 | 7.918172e-54 | -8.615850e-47 |
| Msa0357840 | Msa0648860 | 0.818012 | 2.447039e-52 | -8.615850e-47 |
| Msa0357870 | Msa0648860 | 0.803962 | 2.713568e-49 | -8.615850e-47 |
| Msa0363790 | Msa0648860 | 0.815871 | 7.403863e-52 | -8.615850e-47 |
| Msa0484780 | Msa0648860 | 0.800810 | 1.210118e-48 | -8.615850e-47 |
| Msa0487440 | Msa0648860 | 0.809032 | 2.312273e-50 | -8.615850e-47 |
| Msa0491220 | Msa0648860 | 0.825152 | 5.477346e-54 | -8.615850e-47 |
| Msa0512750 | Msa0648860 | 0.826431 | 2.723353e-54 | -8.615850e-47 |
| Msa0526070 | Msa0648860 | -0.806515 | 7.925415e-50 | -8.615850e-47 |
| Msa0558690 | Msa0648860 | 0.810161 | 1.322823e-50 | -8.615850e-47 |
| Msa0559190 | Msa0648860 | 0.813751 | 2.184522e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648860 | MtrunA17_Chr4g0040491 | 96.203 | 79 | 3 | 0 | 1 | 79 | 1 | 79 | 7.28e-49 | 149 |
| Msa0648860 | MtrunA17_Chr2g0324911 | 72.727 | 77 | 21 | 0 | 3 | 79 | 2 | 78 | 3.29e-29 | 99.4 |
| Msa0648860 | MtrunA17_Chr2g0283451 | 55.405 | 74 | 33 | 0 | 6 | 79 | 7 | 80 | 6.86e-26 | 90.9 |
| Msa0648860 | MtrunA17_Chr4g0040991 | 54.930 | 71 | 32 | 0 | 9 | 79 | 7 | 77 | 3.38e-24 | 86.7 |
| Msa0648860 | MtrunA17_Chr2g0325441 | 54.930 | 71 | 32 | 0 | 9 | 79 | 7 | 77 | 6.17e-24 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648860 | AT2G20562.1 | 61.972 | 71 | 27 | 0 | 9 | 79 | 3 | 73 | 2.75e-21 | 79.3 |
| Msa0648860 | AT2G31090.1 | 60.563 | 71 | 28 | 0 | 9 | 79 | 5 | 75 | 3.41e-20 | 76.6 |
Find 21 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTATAGGTGCCATTATT+TGG | 0.130092 | 4_3:+55396341 | Msa0648860:CDS |
| CCACAAAACTAATTCCAAAT+TGG | 0.179203 | 4_3:-55396684 | None:intergenic |
| ATATAAAGAGCTTCTAATTA+AGG | 0.252543 | 4_3:+55396763 | Msa0648860:three_prime_UTR |
| TTAACAAAATTCCTTGTTAG+AGG | 0.284855 | 4_3:+55396611 | Msa0648860:CDS |
| CCATTGATATTATGTCAAAT+TGG | 0.290690 | 4_3:-55396237 | None:intergenic |
| AGACCTTTGGGTTTCTTCAT+TGG | 0.312975 | 4_3:+55396286 | Msa0648860:CDS |
| CACAAAACTAATTCCAAATT+GGG | 0.364960 | 4_3:-55396683 | None:intergenic |
| GCTTGATGTTGCTGTATGTT+TGG | 0.367654 | 4_3:+55396555 | Msa0648860:CDS |
| TTCCAGTTAGAATTCTTAGA+TGG | 0.387506 | 4_3:+55396584 | Msa0648860:CDS |
| AACCATCTAAGAATTCTAAC+TGG | 0.391220 | 4_3:-55396586 | None:intergenic |
| GGTGCCATTATTTGGATTCT+CGG | 0.429725 | 4_3:+55396349 | Msa0648860:CDS |
| CCAATTTGACATAATATCAA+TGG | 0.432166 | 4_3:+55396237 | Msa0648860:exon |
| ATTAATGATAATAGAGCAAA+GGG | 0.435160 | 4_3:-55396313 | None:intergenic |
| GTGCCATTATTTGGATTCTC+GGG | 0.441384 | 4_3:+55396350 | Msa0648860:CDS |
| ATACCCGAGAATCCAAATAA+TGG | 0.476544 | 4_3:-55396353 | None:intergenic |
| CCTTGTTGCATATGCTGCAC+AGG | 0.484811 | 4_3:+55396529 | Msa0648860:CDS |
| GTCTACATTCACAAAAGTCT+TGG | 0.513894 | 4_3:-55396267 | None:intergenic |
| AATTAATGATAATAGAGCAA+AGG | 0.578873 | 4_3:-55396314 | None:intergenic |
| CCTGTGCAGCATATGCAACA+AGG | 0.629974 | 4_3:-55396529 | None:intergenic |
| ATAGTACTTATCCTCTAACA+AGG | 0.686710 | 4_3:-55396622 | None:intergenic |
| AATCCAATGAAGAAACCCAA+AGG | 0.693801 | 4_3:-55396289 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTAATTTTATCTCTTAT+AGG | + | chr4_3:55396328-55396347 | Msa0648860:CDS | 15.0% |
| !! | ATTAATGATAATAGAGCAAA+GGG | - | chr4_3:55396316-55396335 | None:intergenic | 20.0% |
| !! | AATTAATGATAATAGAGCAA+AGG | - | chr4_3:55396317-55396336 | None:intergenic | 20.0% |
| !! | ACTACAAAAACATAGAAAAT+GGG | - | chr4_3:55396404-55396423 | None:intergenic | 20.0% |
| !! | TACTACAAAAACATAGAAAA+TGG | - | chr4_3:55396405-55396424 | None:intergenic | 20.0% |
| !!! | TGTTCATCTTCTTTTATTAT+AGG | + | chr4_3:55396485-55396504 | Msa0648860:intron | 20.0% |
| !!! | TATATTTTTGTATCCCAATT+TGG | + | chr4_3:55396670-55396689 | Msa0648860:three_prime_UTR | 20.0% |
| !! | ATATAAAGAGCTTCTAATTA+AGG | + | chr4_3:55396763-55396782 | Msa0648860:three_prime_UTR | 20.0% |
| ! | CCATTGATATTATGTCAAAT+TGG | - | chr4_3:55396240-55396259 | None:intergenic | 25.0% |
| ! | CCAATTTGACATAATATCAA+TGG | + | chr4_3:55396237-55396256 | Msa0648860:exon | 25.0% |
| ! | TTAACAAAATTCCTTGTTAG+AGG | + | chr4_3:55396611-55396630 | Msa0648860:CDS | 25.0% |
| ! | GGGATACAAAAATATAAAGA+AGG | - | chr4_3:55396666-55396685 | None:intergenic | 25.0% |
| ! | CACAAAACTAATTCCAAATT+GGG | - | chr4_3:55396686-55396705 | None:intergenic | 25.0% |
| !!! | CAATTTGGAATTAGTTTTGT+GGG | + | chr4_3:55396685-55396704 | Msa0648860:three_prime_UTR | 25.0% |
| ! | TTTTGTGAATGTAGACCTTT+GGG | + | chr4_3:55396274-55396293 | Msa0648860:CDS | 30.0% |
| TTCCAGTTAGAATTCTTAGA+TGG | + | chr4_3:55396584-55396603 | Msa0648860:CDS | 30.0% | |
| AACCATCTAAGAATTCTAAC+TGG | - | chr4_3:55396589-55396608 | None:intergenic | 30.0% | |
| ATAGTACTTATCCTCTAACA+AGG | - | chr4_3:55396625-55396644 | None:intergenic | 30.0% | |
| CCACAAAACTAATTCCAAAT+TGG | - | chr4_3:55396687-55396706 | None:intergenic | 30.0% | |
| !!! | CCAATTTGGAATTAGTTTTG+TGG | + | chr4_3:55396684-55396703 | Msa0648860:three_prime_UTR | 30.0% |
| GTCTACATTCACAAAAGTCT+TGG | - | chr4_3:55396270-55396289 | None:intergenic | 35.0% | |
| ! | CTTTTGTGAATGTAGACCTT+TGG | + | chr4_3:55396273-55396292 | Msa0648860:CDS | 35.0% |
| AATCCAATGAAGAAACCCAA+AGG | - | chr4_3:55396292-55396311 | None:intergenic | 35.0% | |
| !! | CTCTTATAGGTGCCATTATT+TGG | + | chr4_3:55396341-55396360 | Msa0648860:CDS | 35.0% |
| ATACCCGAGAATCCAAATAA+TGG | - | chr4_3:55396356-55396375 | None:intergenic | 35.0% | |
| ! | AGACCTTTGGGTTTCTTCAT+TGG | + | chr4_3:55396286-55396305 | Msa0648860:CDS | 40.0% |
| !! | GGTGCCATTATTTGGATTCT+CGG | + | chr4_3:55396349-55396368 | Msa0648860:CDS | 40.0% |
| ! | GTGCCATTATTTGGATTCTC+GGG | + | chr4_3:55396350-55396369 | Msa0648860:CDS | 40.0% |
| GCTTGATGTTGCTGTATGTT+TGG | + | chr4_3:55396555-55396574 | Msa0648860:CDS | 40.0% | |
| CCTGTGCAGCATATGCAACA+AGG | - | chr4_3:55396532-55396551 | None:intergenic | 50.0% | |
| CCTTGTTGCATATGCTGCAC+AGG | + | chr4_3:55396529-55396548 | Msa0648860:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 55396235 | 55396890 | 55396235 | ID=Msa0648860;Name=Msa0648860 |
| chr4_3 | mRNA | 55396235 | 55396890 | 55396235 | ID=Msa0648860-mRNA-1;Parent=Msa0648860;Name=Msa0648860-mRNA-1;_AED=0.10;_eAED=0.10;_QI=21|1|1|1|1|1|2|260|79 |
| chr4_3 | exon | 55396235 | 55396371 | 55396235 | ID=Msa0648860-mRNA-1:exon:14180;Parent=Msa0648860-mRNA-1 |
| chr4_3 | exon | 55396507 | 55396890 | 55396507 | ID=Msa0648860-mRNA-1:exon:14181;Parent=Msa0648860-mRNA-1 |
| chr4_3 | five_prime_UTR | 55396235 | 55396255 | 55396235 | ID=Msa0648860-mRNA-1:five_prime_utr;Parent=Msa0648860-mRNA-1 |
| chr4_3 | CDS | 55396256 | 55396371 | 55396256 | ID=Msa0648860-mRNA-1:cds;Parent=Msa0648860-mRNA-1 |
| chr4_3 | CDS | 55396507 | 55396630 | 55396507 | ID=Msa0648860-mRNA-1:cds;Parent=Msa0648860-mRNA-1 |
| chr4_3 | three_prime_UTR | 55396631 | 55396890 | 55396631 | ID=Msa0648860-mRNA-1:three_prime_utr;Parent=Msa0648860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
