Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077950 | XP_003623719.1 | 97.203 | 286 | 8 | 0 | 14 | 299 | 41 | 326 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077950 | sp|Q40316|VESTR_MEDSA | 68.881 | 286 | 89 | 0 | 14 | 299 | 41 | 326 | 1.15e-147 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077950 | A2Q3Y3 | 97.203 | 286 | 8 | 0 | 14 | 299 | 41 | 326 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033340 | Msa1077950 | 0.847351 | 1.221695e-59 | -8.615850e-47 |
| Msa0054260 | Msa1077950 | 0.817762 | 2.786706e-52 | -8.615850e-47 |
| Msa0054310 | Msa1077950 | 0.804953 | 1.686301e-49 | -8.615850e-47 |
| Msa0055690 | Msa1077950 | 0.814720 | 1.334586e-51 | -8.615850e-47 |
| Msa0055730 | Msa1077950 | 0.833108 | 6.445817e-56 | -8.615850e-47 |
| Msa0085360 | Msa1077950 | -0.805993 | 1.020768e-49 | -8.615850e-47 |
| Msa0100090 | Msa1077950 | 0.821343 | 4.247294e-53 | -8.615850e-47 |
| Msa0610370 | Msa1077950 | 0.806313 | 8.739250e-50 | -8.615850e-47 |
| Msa0623080 | Msa1077950 | 0.808833 | 2.549581e-50 | -8.615850e-47 |
| Msa0638280 | Msa1077950 | 0.816179 | 6.320589e-52 | -8.615850e-47 |
| Msa0638320 | Msa1077950 | 0.809574 | 1.769453e-50 | -8.615850e-47 |
| Msa0650260 | Msa1077950 | 0.803341 | 3.650806e-49 | -8.615850e-47 |
| Msa0650900 | Msa1077950 | 0.814229 | 1.713131e-51 | -8.615850e-47 |
| Msa0654010 | Msa1077950 | 0.808894 | 2.474364e-50 | -8.615850e-47 |
| Msa0657970 | Msa1077950 | 0.801487 | 8.798861e-49 | -8.615850e-47 |
| Msa0668150 | Msa1077950 | 0.806268 | 8.934200e-50 | -8.615850e-47 |
| Msa0677270 | Msa1077950 | 0.804051 | 2.600837e-49 | -8.615850e-47 |
| Msa0689010 | Msa1077950 | 0.814520 | 1.477960e-51 | -8.615850e-47 |
| Msa0692170 | Msa1077950 | 0.823000 | 1.752469e-53 | -8.615850e-47 |
| Msa0693380 | Msa1077950 | 0.824563 | 7.541429e-54 | -8.615850e-47 |
| Msa0734660 | Msa1077950 | 0.800898 | 1.161228e-48 | -8.615850e-47 |
| Msa0737520 | Msa1077950 | 0.810588 | 1.069849e-50 | -8.615850e-47 |
| Msa0782490 | Msa1077950 | 0.806028 | 1.003444e-49 | -8.615850e-47 |
| Msa0813670 | Msa1077950 | 0.803820 | 2.904898e-49 | -8.615850e-47 |
| Msa0165510 | Msa1077950 | 0.800378 | 1.482422e-48 | -8.615850e-47 |
| Msa0173990 | Msa1077950 | 0.832850 | 7.471342e-56 | -8.615850e-47 |
| Msa0197660 | Msa1077950 | 0.838766 | 2.366622e-57 | -8.615850e-47 |
| Msa0202750 | Msa1077950 | 0.802044 | 6.761662e-49 | -8.615850e-47 |
| Msa0212310 | Msa1077950 | 0.828483 | 8.766252e-55 | -8.615850e-47 |
| Msa0235190 | Msa1077950 | 0.825347 | 4.924762e-54 | -8.615850e-47 |
| Msa0371570 | Msa1077950 | 0.806105 | 9.666519e-50 | -8.615850e-47 |
| Msa0389280 | Msa1077950 | 0.819096 | 1.389751e-52 | -8.615850e-47 |
| Msa0442850 | Msa1077950 | 0.805831 | 1.104187e-49 | -8.615850e-47 |
| Msa0445280 | Msa1077950 | 0.817417 | 3.334069e-52 | -8.615850e-47 |
| Msa0452310 | Msa1077950 | 0.805183 | 1.509534e-49 | -8.615850e-47 |
| Msa0458310 | Msa1077950 | 0.800302 | 1.535905e-48 | -8.615850e-47 |
| Msa0458700 | Msa1077950 | 0.826309 | 2.912140e-54 | -8.615850e-47 |
| Msa0465930 | Msa1077950 | 0.800973 | 1.120664e-48 | -8.615850e-47 |
| Msa0473240 | Msa1077950 | 0.808989 | 2.361491e-50 | -8.615850e-47 |
| Msa0992490 | Msa1077950 | -0.806500 | 7.981767e-50 | -8.615850e-47 |
| Msa1007030 | Msa1077950 | 0.803613 | 3.207246e-49 | -8.615850e-47 |
| Msa1014540 | Msa1077950 | 0.801988 | 6.944745e-49 | -8.615850e-47 |
| Msa1027240 | Msa1077950 | 0.856021 | 4.262235e-62 | -8.615850e-47 |
| Msa1027290 | Msa1077950 | 0.886555 | 3.089048e-72 | -8.615850e-47 |
| Msa1077950 | Msa1082500 | 0.823588 | 1.277323e-53 | -8.615850e-47 |
| Msa1077950 | Msa1107800 | 0.814248 | 1.697050e-51 | -8.615850e-47 |
| Msa1077950 | Msa1110960 | 0.868826 | 4.891661e-66 | -8.615850e-47 |
| Msa1077950 | Msa1181550 | 0.804849 | 1.772705e-49 | -8.615850e-47 |
| Msa1077950 | Msa1203250 | 0.804117 | 2.519856e-49 | -8.615850e-47 |
| Msa1077950 | Msa1233500 | 0.839595 | 1.442152e-57 | -8.615850e-47 |
| Msa1077950 | Msa1249490 | 0.812771 | 3.584655e-51 | -8.615850e-47 |
| Msa1077950 | Msa1273920 | 0.805913 | 1.060784e-49 | -8.615850e-47 |
| Msa1077950 | Msa1275770 | 0.807741 | 4.357767e-50 | -8.615850e-47 |
| Msa1077950 | Msa1308620 | 0.817588 | 3.049901e-52 | -8.615850e-47 |
| Msa1077950 | Msa1310210 | 0.802272 | 6.070576e-49 | -8.615850e-47 |
| Msa1077950 | Msa1314170 | 0.801344 | 9.414036e-49 | -8.615850e-47 |
| Msa1077950 | Msa1336490 | 0.803295 | 3.732098e-49 | -8.615850e-47 |
| Msa1077950 | Msa1362880 | 0.811558 | 6.592937e-51 | -8.615850e-47 |
| Msa1077950 | Msa1369530 | 0.802166 | 6.383590e-49 | -8.615850e-47 |
| Msa1077950 | Msa1384290 | 0.812318 | 4.503000e-51 | -8.615850e-47 |
| Msa1077950 | Msa1396830 | 0.821906 | 3.147955e-53 | -8.615850e-47 |
| Msa1077950 | Msa1423990 | 0.809859 | 1.536613e-50 | -8.615850e-47 |
| Msa1077950 | Msa1455490 | 0.804702 | 1.902641e-49 | -8.615850e-47 |
| Msa1077950 | Msa1461250 | -0.803162 | 3.976803e-49 | -8.615850e-47 |
| Msa0239800 | Msa1077950 | 0.844109 | 9.268118e-59 | -8.615850e-47 |
| Msa0258760 | Msa1077950 | 0.820231 | 7.651341e-53 | -8.615850e-47 |
| Msa0273570 | Msa1077950 | 0.811482 | 6.848206e-51 | -8.615850e-47 |
| Msa0273580 | Msa1077950 | 0.815268 | 1.008452e-51 | -8.615850e-47 |
| Msa0277820 | Msa1077950 | 0.815418 | 9.341002e-52 | -8.615850e-47 |
| Msa0313780 | Msa1077950 | 0.821413 | 4.092105e-53 | -8.615850e-47 |
| Msa0313920 | Msa1077950 | 0.848838 | 4.749027e-60 | -8.615850e-47 |
| Msa0317510 | Msa1077950 | 0.839084 | 1.957378e-57 | -8.615850e-47 |
| Msa0320100 | Msa1077950 | 0.802646 | 5.081580e-49 | -8.615850e-47 |
| Msa0323080 | Msa1077950 | 0.817145 | 3.838864e-52 | -8.615850e-47 |
| Msa0335040 | Msa1077950 | 0.805475 | 1.311410e-49 | -8.615850e-47 |
| Msa0344830 | Msa1077950 | 0.810339 | 1.210672e-50 | -8.615850e-47 |
| Msa0347360 | Msa1077950 | 0.806538 | 7.837307e-50 | -8.615850e-47 |
| Msa0484780 | Msa1077950 | 0.820233 | 7.644513e-53 | -8.615850e-47 |
| Msa0487440 | Msa1077950 | 0.802584 | 5.233306e-49 | -8.615850e-47 |
| Msa0517330 | Msa1077950 | 0.804522 | 2.074802e-49 | -8.615850e-47 |
| Msa0558690 | Msa1077950 | 0.822825 | 1.925514e-53 | -8.615850e-47 |
| Msa0562440 | Msa1077950 | 0.819323 | 1.233482e-52 | -8.615850e-47 |
| Msa0580610 | Msa1077950 | 0.800372 | 1.486639e-48 | -8.615850e-47 |
| Msa0860410 | Msa1077950 | 0.809498 | 1.836942e-50 | -8.615850e-47 |
| Msa0860570 | Msa1077950 | 0.800740 | 1.250819e-48 | -8.615850e-47 |
| Msa0865390 | Msa1077950 | 0.802829 | 4.658876e-49 | -8.615850e-47 |
| Msa0909000 | Msa1077950 | -0.804873 | 1.752415e-49 | -8.615850e-47 |
| Msa0975220 | Msa1077950 | 0.802088 | 6.623529e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077950 | MtrunA17_Chr7g0245741 | 97.203 | 286 | 8 | 0 | 14 | 299 | 41 | 326 | 0.0 | 575 |
| Msa1077950 | MtrunA17_Chr7g0245711 | 90.559 | 286 | 27 | 0 | 14 | 299 | 3 | 288 | 0.0 | 541 |
| Msa1077950 | MtrunA17_Chr7g0245731 | 90.559 | 286 | 27 | 0 | 14 | 299 | 91 | 376 | 0.0 | 541 |
| Msa1077950 | MtrunA17_Chr7g0245641 | 75.084 | 297 | 72 | 1 | 5 | 299 | 70 | 366 | 3.66e-170 | 476 |
| Msa1077950 | MtrunA17_Chr7g0245671 | 74.658 | 292 | 71 | 2 | 11 | 299 | 38 | 329 | 7.11e-163 | 456 |
| Msa1077950 | MtrunA17_Chr7g0245691 | 71.812 | 298 | 81 | 1 | 5 | 299 | 33 | 330 | 4.64e-162 | 454 |
| Msa1077950 | MtrunA17_Chr7g0245631 | 69.231 | 286 | 88 | 0 | 14 | 299 | 41 | 326 | 4.87e-149 | 421 |
| Msa1077950 | MtrunA17_Chr4g0010991 | 46.939 | 294 | 154 | 2 | 8 | 299 | 36 | 329 | 3.78e-87 | 263 |
| Msa1077950 | MtrunA17_Chr1g0155411 | 44.912 | 285 | 153 | 3 | 17 | 299 | 43 | 325 | 2.47e-82 | 251 |
| Msa1077950 | MtrunA17_Chr1g0155431 | 45.139 | 288 | 154 | 3 | 14 | 299 | 40 | 325 | 4.22e-80 | 246 |
| Msa1077950 | MtrunA17_Chr4g0048961 | 38.267 | 277 | 159 | 3 | 31 | 297 | 62 | 336 | 2.32e-63 | 203 |
| Msa1077950 | MtrunA17_Chr4g0042101 | 34.727 | 311 | 179 | 7 | 8 | 299 | 48 | 353 | 6.00e-61 | 197 |
| Msa1077950 | MtrunA17_Chr5g0423551 | 34.386 | 285 | 177 | 6 | 19 | 299 | 41 | 319 | 6.92e-55 | 181 |
| Msa1077950 | MtrunA17_Chr2g0331211 | 37.457 | 291 | 167 | 9 | 15 | 299 | 38 | 319 | 1.03e-53 | 178 |
| Msa1077950 | MtrunA17_Chr8g0363831 | 34.982 | 283 | 170 | 7 | 19 | 296 | 46 | 319 | 4.30e-47 | 160 |
| Msa1077950 | MtrunA17_Chr3g0077231 | 32.302 | 291 | 178 | 6 | 17 | 299 | 41 | 320 | 5.67e-46 | 157 |
| Msa1077950 | MtrunA17_Chr3g0106111 | 34.122 | 296 | 172 | 8 | 14 | 299 | 37 | 319 | 4.58e-44 | 152 |
| Msa1077950 | MtrunA17_Chr2g0281991 | 33.555 | 301 | 175 | 8 | 19 | 299 | 45 | 340 | 2.98e-43 | 151 |
| Msa1077950 | MtrunA17_Chr8g0364051 | 33.333 | 288 | 178 | 7 | 17 | 299 | 43 | 321 | 1.02e-42 | 149 |
| Msa1077950 | MtrunA17_Chr3g0077221 | 31.034 | 290 | 181 | 7 | 17 | 298 | 45 | 323 | 5.73e-41 | 144 |
| Msa1077950 | MtrunA17_Chr5g0431311 | 34.256 | 289 | 165 | 9 | 22 | 299 | 45 | 319 | 1.06e-40 | 144 |
| Msa1077950 | MtrunA17_Chr4g0039321 | 33.101 | 287 | 175 | 8 | 19 | 298 | 46 | 322 | 4.38e-40 | 142 |
| Msa1077950 | MtrunA17_Chr2g0282001 | 31.544 | 298 | 181 | 6 | 19 | 297 | 44 | 337 | 2.14e-39 | 140 |
| Msa1077950 | MtrunA17_Chr4g0002661 | 32.384 | 281 | 178 | 6 | 22 | 299 | 52 | 323 | 6.13e-38 | 136 |
| Msa1077950 | MtrunA17_Chr2g0333781 | 33.451 | 284 | 174 | 9 | 20 | 299 | 57 | 329 | 6.10e-37 | 134 |
| Msa1077950 | MtrunA17_Chr7g0275521 | 32.237 | 304 | 176 | 8 | 19 | 299 | 44 | 340 | 1.91e-36 | 133 |
| Msa1077950 | MtrunA17_Chr4g0001321 | 30.496 | 282 | 185 | 5 | 20 | 299 | 54 | 326 | 1.30e-34 | 128 |
| Msa1077950 | MtrunA17_Chr2g0282011 | 32.215 | 298 | 179 | 7 | 19 | 297 | 45 | 338 | 3.21e-34 | 127 |
| Msa1077950 | MtrunA17_Chr4g0039311 | 32.766 | 235 | 151 | 6 | 19 | 250 | 48 | 278 | 6.75e-34 | 126 |
| Msa1077950 | MtrunA17_Chr2g0291541 | 29.167 | 312 | 191 | 9 | 2 | 299 | 31 | 326 | 2.91e-33 | 124 |
| Msa1077950 | MtrunA17_Chr4g0002961 | 32.384 | 281 | 178 | 6 | 22 | 299 | 52 | 323 | 6.55e-31 | 118 |
| Msa1077950 | MtrunA17_Chr6g0450211 | 31.132 | 212 | 118 | 7 | 30 | 226 | 102 | 300 | 1.53e-23 | 98.6 |
| Msa1077950 | MtrunA17_Chr5g0411071 | 28.440 | 218 | 141 | 5 | 29 | 243 | 55 | 260 | 1.44e-19 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077950 | AT2G45400.3 | 48.621 | 290 | 142 | 4 | 16 | 299 | 19 | 307 | 1.53e-93 | 280 |
| Msa1077950 | AT2G45400.1 | 46.865 | 303 | 154 | 4 | 3 | 299 | 63 | 364 | 5.17e-93 | 280 |
| Msa1077950 | AT2G45400.2 | 50.000 | 244 | 116 | 3 | 16 | 253 | 76 | 319 | 1.63e-80 | 247 |
| Msa1077950 | AT5G42800.1 | 43.945 | 289 | 150 | 3 | 17 | 299 | 43 | 325 | 6.67e-77 | 239 |
| Msa1077950 | AT4G35420.1 | 38.194 | 288 | 166 | 7 | 16 | 299 | 42 | 321 | 1.49e-62 | 201 |
| Msa1077950 | AT1G61720.1 | 37.919 | 298 | 168 | 7 | 14 | 299 | 45 | 337 | 2.54e-57 | 188 |
| Msa1077950 | AT2G45400.4 | 49.198 | 187 | 90 | 2 | 8 | 189 | 68 | 254 | 1.18e-56 | 183 |
| Msa1077950 | AT1G68540.1 | 34.114 | 299 | 185 | 7 | 6 | 299 | 30 | 321 | 5.37e-53 | 176 |
| Msa1077950 | AT1G25460.1 | 33.904 | 292 | 184 | 5 | 12 | 299 | 33 | 319 | 5.43e-52 | 173 |
| Msa1077950 | AT2G02400.1 | 35.616 | 292 | 165 | 8 | 18 | 299 | 40 | 318 | 1.39e-49 | 167 |
| Msa1077950 | AT1G09480.2 | 34.495 | 287 | 179 | 6 | 16 | 299 | 42 | 322 | 5.08e-47 | 160 |
| Msa1077950 | AT1G09480.1 | 34.495 | 287 | 179 | 6 | 16 | 299 | 89 | 369 | 1.49e-46 | 160 |
| Msa1077950 | AT1G09490.2 | 33.559 | 295 | 186 | 7 | 8 | 299 | 4 | 291 | 1.57e-46 | 158 |
| Msa1077950 | AT1G09510.1 | 36.655 | 281 | 163 | 7 | 22 | 296 | 48 | 319 | 1.02e-45 | 157 |
| Msa1077950 | AT4G27250.1 | 31.338 | 284 | 170 | 7 | 29 | 290 | 57 | 337 | 3.16e-45 | 157 |
| Msa1077950 | AT1G09490.1 | 33.449 | 287 | 182 | 6 | 16 | 299 | 42 | 322 | 1.00e-44 | 154 |
| Msa1077950 | AT5G58490.1 | 33.987 | 306 | 185 | 9 | 1 | 299 | 28 | 323 | 1.61e-44 | 154 |
| Msa1077950 | AT4G27250.2 | 31.522 | 276 | 170 | 7 | 29 | 290 | 57 | 327 | 3.33e-44 | 154 |
| Msa1077950 | AT1G51410.1 | 32.270 | 282 | 180 | 7 | 22 | 299 | 49 | 323 | 7.87e-42 | 147 |
| Msa1077950 | AT1G66800.1 | 33.216 | 283 | 182 | 6 | 17 | 299 | 43 | 318 | 1.17e-41 | 146 |
| Msa1077950 | AT5G19440.1 | 33.103 | 290 | 175 | 7 | 17 | 298 | 45 | 323 | 1.17e-40 | 144 |
| Msa1077950 | AT1G09500.2 | 31.597 | 288 | 187 | 7 | 14 | 296 | 6 | 288 | 2.05e-38 | 137 |
| Msa1077950 | AT1G09500.1 | 32.180 | 289 | 185 | 8 | 13 | 296 | 40 | 322 | 4.22e-38 | 137 |
| Msa1077950 | AT1G09500.3 | 33.195 | 241 | 152 | 5 | 13 | 249 | 40 | 275 | 7.42e-38 | 135 |
| Msa1077950 | AT1G15950.3 | 33.684 | 285 | 168 | 7 | 22 | 299 | 52 | 322 | 6.41e-37 | 135 |
| Msa1077950 | AT1G15950.1 | 33.684 | 285 | 168 | 7 | 22 | 299 | 52 | 322 | 6.41e-37 | 135 |
| Msa1077950 | AT2G33590.1 | 32.857 | 280 | 163 | 10 | 22 | 291 | 48 | 312 | 3.36e-36 | 132 |
| Msa1077950 | AT1G76470.1 | 32.143 | 280 | 185 | 4 | 22 | 299 | 46 | 322 | 7.15e-35 | 129 |
| Msa1077950 | AT1G15950.2 | 32.601 | 273 | 164 | 6 | 22 | 287 | 52 | 311 | 8.21e-34 | 126 |
| Msa1077950 | AT1G68540.2 | 32.877 | 219 | 138 | 5 | 85 | 299 | 1 | 214 | 1.37e-33 | 122 |
| Msa1077950 | AT2G33600.1 | 34.783 | 276 | 163 | 9 | 22 | 291 | 48 | 312 | 5.07e-33 | 124 |
| Msa1077950 | AT1G80820.1 | 31.429 | 280 | 181 | 5 | 22 | 299 | 47 | 317 | 7.82e-33 | 124 |
| Msa1077950 | AT1G15950.6 | 34.052 | 232 | 143 | 4 | 22 | 251 | 52 | 275 | 3.22e-31 | 118 |
| Msa1077950 | AT1G15950.5 | 34.052 | 232 | 143 | 4 | 22 | 251 | 52 | 275 | 4.86e-31 | 117 |
| Msa1077950 | AT1G15950.4 | 34.052 | 232 | 143 | 4 | 22 | 251 | 52 | 275 | 5.70e-31 | 118 |
| Msa1077950 | AT1G80820.2 | 32.906 | 234 | 143 | 6 | 22 | 251 | 47 | 270 | 3.92e-28 | 109 |
| Msa1077950 | AT1G15950.7 | 33.043 | 230 | 137 | 6 | 77 | 299 | 5 | 224 | 7.91e-25 | 100 |
| Msa1077950 | AT2G23910.4 | 26.437 | 261 | 172 | 9 | 25 | 276 | 19 | 268 | 1.77e-21 | 92.0 |
| Msa1077950 | AT2G23910.1 | 26.437 | 261 | 172 | 9 | 25 | 276 | 53 | 302 | 2.66e-21 | 92.0 |
| Msa1077950 | AT5G14700.1 | 27.953 | 254 | 151 | 7 | 39 | 273 | 115 | 355 | 2.10e-20 | 90.5 |
| Msa1077950 | AT2G23910.2 | 25.652 | 230 | 157 | 7 | 25 | 250 | 53 | 272 | 1.86e-18 | 83.6 |
| Msa1077950 | AT2G23910.3 | 25.652 | 230 | 157 | 7 | 25 | 250 | 53 | 272 | 2.49e-18 | 83.6 |
| Msa1077950 | AT4G30470.1 | 26.154 | 260 | 161 | 9 | 30 | 275 | 58 | 300 | 1.35e-17 | 81.6 |
| Msa1077950 | AT5G14700.2 | 31.915 | 141 | 73 | 4 | 43 | 170 | 119 | 249 | 4.07e-15 | 74.7 |
Find 49 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCTGCATTGAAACTTTC+TGG | 0.125713 | 7_2:+76754132 | None:intergenic |
| ACCTCTCTGTCTTTGTTATT+TGG | 0.159764 | 7_2:-76753712 | Msa1077950:intron |
| TATATGAAATTCAGGGTATT+TGG | 0.255630 | 7_2:+76751821 | None:intergenic |
| GAGAAGGCTGTTCTAGAGTT+TGG | 0.265629 | 7_2:-76753823 | Msa1077950:CDS |
| GAGCAATTATATCTCCCTTT+TGG | 0.266827 | 7_2:+76751888 | None:intergenic |
| AGTGTTGGTATATGAAATTC+AGG | 0.275539 | 7_2:+76751813 | None:intergenic |
| CACTGCAACTCCAATTGATT+TGG | 0.296688 | 7_2:-76754085 | Msa1077950:CDS |
| AGAACAATTGATGGAGCATT+AGG | 0.319772 | 7_2:-76754030 | Msa1077950:CDS |
| GGCTTCCTCACAAAACTTCC+AGG | 0.329690 | 7_2:-76754198 | Msa1077950:CDS |
| AGGGAGCTGAAGGAAATTAA+AGG | 0.350467 | 7_2:-76751692 | Msa1077950:CDS |
| TCATTCATTTCCAAATCAAT+TGG | 0.363586 | 7_2:+76754075 | None:intergenic |
| ATGTAATGGATGAGAGTTAT+TGG | 0.372531 | 7_2:-76753915 | Msa1077950:CDS |
| GATTCAGTGTTGCAAGGAAA+AGG | 0.394699 | 7_2:-76751582 | Msa1077950:CDS |
| TCTTCAATATTTGCAATGAA+TGG | 0.401037 | 7_2:+76751864 | None:intergenic |
| ATAAAGTATAGTATTAATAA+AGG | 0.404503 | 7_2:-76751472 | Msa1077950:three_prime_UTR |
| TGGCTTCTCTCGTCTCCATA+TGG | 0.409487 | 7_2:-76751964 | Msa1077950:CDS |
| TTGCTGCATTGAAACTTTCT+GGG | 0.416184 | 7_2:+76754133 | None:intergenic |
| GATATTTATTCTAGTAGAAA+AGG | 0.422483 | 7_2:-76754559 | Msa1077950:intron |
| GTAGGGGACAAGAATCCATT+TGG | 0.425747 | 7_2:-76751984 | Msa1077950:intron |
| CAAGTGCTTCAGCAGTGTAT+TGG | 0.428274 | 7_2:-76753954 | Msa1077950:CDS |
| ATTGAATATGACCAAGCAAA+TGG | 0.453024 | 7_2:+76753862 | None:intergenic |
| TATCATCAACATGCACCATA+TGG | 0.453095 | 7_2:+76751949 | None:intergenic |
| AGTTTCAATGCAGCAATTGA+AGG | 0.458381 | 7_2:-76754126 | Msa1077950:CDS |
| CTTGAGCATCCTAATCCAAA+AGG | 0.458566 | 7_2:-76751903 | Msa1077950:CDS |
| GAGATTTGAAACCATTTGCT+TGG | 0.459886 | 7_2:-76753873 | Msa1077950:CDS |
| TTCTAAAACAATGGCAGAGA+AGG | 0.467203 | 7_2:-76753839 | Msa1077950:CDS |
| TTCATTTGTCCTAAGCGTCC+TGG | 0.480298 | 7_2:-76753745 | Msa1077950:CDS |
| TAAATTGAGCCAGGACGCTT+AGG | 0.480492 | 7_2:+76753736 | None:intergenic |
| ATTCAGTGTTGCAAGGAAAA+GGG | 0.509113 | 7_2:-76751581 | Msa1077950:CDS |
| TGGAGACGAGAGAAGCCAAA+TGG | 0.520904 | 7_2:+76751969 | None:intergenic |
| AGGACGCTTAGGACAAATGA+AGG | 0.523329 | 7_2:+76753747 | None:intergenic |
| ATATTCAATTTCTAAAACAA+TGG | 0.525829 | 7_2:-76753848 | Msa1077950:CDS |
| AGATAAAGATGATGATGTAA+TGG | 0.533409 | 7_2:-76753929 | Msa1077950:CDS |
| ACACAGCCTTGAGGAAATGT+TGG | 0.550570 | 7_2:-76751612 | Msa1077950:CDS |
| AAGGGTCCAAGAACAAAAGT+TGG | 0.557011 | 7_2:+76753766 | None:intergenic |
| TTGAGCATCCTAATCCAAAA+GGG | 0.569459 | 7_2:-76751902 | Msa1077950:CDS |
| ACAGAGCGCAAGAAAGATGT+TGG | 0.569599 | 7_2:-76754219 | Msa1077950:intron |
| CTAGAGTTTGGAGAACAACA+TGG | 0.574839 | 7_2:-76753811 | Msa1077950:CDS |
| CTAGAATAAATATCTGTCGA+TGG | 0.577307 | 7_2:+76754568 | None:intergenic |
| AGAGAGGTATAAATTGAGCC+AGG | 0.580168 | 7_2:+76753727 | None:intergenic |
| GCAGCAATTGAAGGATGCAA+AGG | 0.592622 | 7_2:-76754117 | Msa1077950:CDS |
| ACTAGAACTCACTCTAGTGT+TGG | 0.602184 | 7_2:+76751798 | None:intergenic |
| GTGTTGGTATATGAAATTCA+GGG | 0.639563 | 7_2:+76751814 | None:intergenic |
| CGATACGATTCAGTGTTGCA+AGG | 0.647384 | 7_2:-76751588 | Msa1077950:CDS |
| TATCGTCCAACATTTCCTCA+AGG | 0.653115 | 7_2:+76751606 | None:intergenic |
| ACCAAATAACAAAGACAGAG+AGG | 0.665667 | 7_2:+76753711 | None:intergenic |
| AATCAATTGGAGTTGCAGTG+TGG | 0.684696 | 7_2:+76754088 | None:intergenic |
| GGACGCTTAGGACAAATGAA+GGG | 0.710235 | 7_2:+76753748 | None:intergenic |
| CGAGTTCAAACACAGCCTTG+AGG | 0.724622 | 7_2:-76751621 | Msa1077950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTTTAATAAAAATTG+GGG | - | chr7_2:76752416-76752435 | Msa1077950:intron | 10.0% |
| !! | TCAATATAAATTGATATATT+TGG | - | chr7_2:76752599-76752618 | Msa1077950:intron | 10.0% |
| !! | TATAAAAAAAAAACATTTGT+TGG | - | chr7_2:76753791-76753810 | Msa1077950:CDS | 10.0% |
| !!! | ATCTTTGATTTTTTTTTTTT+TGG | - | chr7_2:76754493-76754512 | Msa1077950:intron | 10.0% |
| !!! | ATATTCAATTTCTAAAACAA+TGG | - | chr7_2:76752201-76752220 | Msa1077950:intron | 15.0% |
| !! | TATTATTAGTGAAAAGATTA+TGG | + | chr7_2:76753018-76753037 | None:intergenic | 15.0% |
| !! | TGTGTTTATAAATTATAAGT+GGG | + | chr7_2:76753511-76753530 | None:intergenic | 15.0% |
| !! | ATGTGTTTATAAATTATAAG+TGG | + | chr7_2:76753512-76753531 | None:intergenic | 15.0% |
| !!! | ATGACAATACTTTTTTTTAA+CGG | + | chr7_2:76753928-76753947 | None:intergenic | 15.0% |
| !!! | ATACCAATAAATTCATTTTT+AGG | - | chr7_2:76753989-76754008 | Msa1077950:CDS | 15.0% |
| !!! | TATTTATTCATTTTGTTCAT+AGG | - | chr7_2:76754337-76754356 | Msa1077950:intron | 15.0% |
| !!! | ATTTATTCATTTTGTTCATA+GGG | - | chr7_2:76754338-76754357 | Msa1077950:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGGTTACA+AGG | - | chr7_2:76754501-76754520 | Msa1077950:intron | 15.0% |
| !! | GATATTTATTCTAGTAGAAA+AGG | - | chr7_2:76751490-76751509 | Msa1077950:three_prime_UTR | 20.0% |
| !!! | ATTGAAGAATTTTAGCTTTT+GGG | + | chr7_2:76751882-76751901 | None:intergenic | 20.0% |
| !! | ATATAGTCAGAAGAAAAAAA+AGG | + | chr7_2:76752386-76752405 | None:intergenic | 20.0% |
| !!! | AACTAATGATCATTTTTCAA+CGG | - | chr7_2:76752467-76752486 | Msa1077950:intron | 20.0% |
| !! | CCTAAAATATAAGCAAAAAT+TGG | + | chr7_2:76752661-76752680 | None:intergenic | 20.0% |
| !!! | CCAATTTTTGCTTATATTTT+AGG | - | chr7_2:76752658-76752677 | Msa1077950:intron | 20.0% |
| !!! | TTTTTGCTTATATTTTAGGA+CGG | - | chr7_2:76752662-76752681 | Msa1077950:intron | 20.0% |
| !!! | TATTTTGTAAGTATTGTGTT+GGG | + | chr7_2:76753758-76753777 | None:intergenic | 20.0% |
| !!! | ATATTTTGTAAGTATTGTGT+TGG | + | chr7_2:76753759-76753778 | None:intergenic | 20.0% |
| !!! | TGCATAAACTAATTTTCTAA+AGG | + | chr7_2:76753849-76753868 | None:intergenic | 20.0% |
| !! | TGAATTCTACATATTAGATT+GGG | + | chr7_2:76753963-76753982 | None:intergenic | 20.0% |
| !! | ATGCCTAAAAATGAATTTAT+TGG | + | chr7_2:76753995-76754014 | None:intergenic | 20.0% |
| !! | TGCTAATTAAGAATAGAAAA+TGG | - | chr7_2:76754037-76754056 | Msa1077950:CDS | 20.0% |
| !! | TAAATACTAGTTACAGTAAA+AGG | + | chr7_2:76754323-76754342 | None:intergenic | 20.0% |
| ! | TCTTACAACATAACAAATCA+AGG | - | chr7_2:76751519-76751538 | Msa1077950:three_prime_UTR | 25.0% |
| !! | ATATGCATGAAGTGTTAATT+CGG | - | chr7_2:76751709-76751728 | Msa1077950:intron | 25.0% |
| !! | AACACAATTTTATTGCTTGT+TGG | + | chr7_2:76751803-76751822 | None:intergenic | 25.0% |
| !!! | CATTGAAGAATTTTAGCTTT+TGG | + | chr7_2:76751883-76751902 | None:intergenic | 25.0% |
| ! | TCATTCATTTCCAAATCAAT+TGG | + | chr7_2:76751977-76751996 | None:intergenic | 25.0% |
| !! | AGATAAAGATGATGATGTAA+TGG | - | chr7_2:76752120-76752139 | Msa1077950:intron | 25.0% |
| !! | ATAATACCAACTTTTGTTCT+TGG | - | chr7_2:76752277-76752296 | Msa1077950:intron | 25.0% |
| ! | TTTAATAAAAATTGGGGAAG+AGG | - | chr7_2:76752422-76752441 | Msa1077950:intron | 25.0% |
| ! | GAAGCTATTGTTTATAAATG+TGG | - | chr7_2:76752444-76752463 | Msa1077950:intron | 25.0% |
| ! | TGACTTTATAACCTCAAAAA+TGG | + | chr7_2:76752513-76752532 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTACATTTTGGAA+CGG | + | chr7_2:76752575-76752594 | None:intergenic | 25.0% |
| !!! | ACTCATTTTTGCTTACATTT+TGG | + | chr7_2:76752580-76752599 | None:intergenic | 25.0% |
| !!! | TTTTGCTTATATTTTAGGAC+GGG | - | chr7_2:76752663-76752682 | Msa1077950:intron | 25.0% |
| !! | AAAAACCATCAAATTAGCTT+TGG | - | chr7_2:76752721-76752740 | Msa1077950:intron | 25.0% |
| ! | AAAGAGAGAGAAGATAAAAT+TGG | - | chr7_2:76752749-76752768 | Msa1077950:intron | 25.0% |
| !!! | AATTTAGCTTGTTGTTCTAA+CGG | - | chr7_2:76753134-76753153 | Msa1077950:intron | 25.0% |
| ! | AGATAAGTCGTAAAATATAG+TGG | + | chr7_2:76753202-76753221 | None:intergenic | 25.0% |
| ! | TTATCTTAGAAATCATGGTT+AGG | - | chr7_2:76753216-76753235 | Msa1077950:intron | 25.0% |
| ! | AACAATATGTTTATAAGTGG+AGG | + | chr7_2:76753274-76753293 | None:intergenic | 25.0% |
| ! | CCTAACAATATGTTTATAAG+TGG | + | chr7_2:76753277-76753296 | None:intergenic | 25.0% |
| ! | CCACTTATAAACATATTGTT+AGG | - | chr7_2:76753274-76753293 | Msa1077950:intron | 25.0% |
| !!! | AGTTGTTAAAAGTGTCAAAT+CGG | + | chr7_2:76753553-76753572 | None:intergenic | 25.0% |
| ! | AGGAAACTAAGATTCATTTA+AGG | + | chr7_2:76753829-76753848 | None:intergenic | 25.0% |
| ! | GTGAATTCTACATATTAGAT+TGG | + | chr7_2:76753964-76753983 | None:intergenic | 25.0% |
| ! | CTAATATGTAGAATTCACAA+TGG | - | chr7_2:76753966-76753985 | Msa1077950:CDS | 25.0% |
| !! | CATTTTTACAATGAAACTAG+AGG | + | chr7_2:76754019-76754038 | None:intergenic | 25.0% |
| ! | AATAGAAAATGGATGTTGTA+GGG | - | chr7_2:76754048-76754067 | Msa1077950:CDS | 25.0% |
| ! | TCTTCAATATTTGCAATGAA+TGG | + | chr7_2:76754188-76754207 | None:intergenic | 25.0% |
| !! | TATATGAAATTCAGGGTATT+TGG | + | chr7_2:76754231-76754250 | None:intergenic | 25.0% |
| !!! | AGTTTTTTTGAGGTTAAATG+TGG | + | chr7_2:76754393-76754412 | None:intergenic | 25.0% |
| ! | TTTAACCTCAAAAAAACTCA+TGG | - | chr7_2:76754395-76754414 | Msa1077950:intron | 25.0% |
| CTAGAATAAATATCTGTCGA+TGG | + | chr7_2:76751484-76751503 | None:intergenic | 30.0% | |
| AACTCCAGGGAAAAAAATTA+TGG | - | chr7_2:76751602-76751621 | Msa1077950:CDS | 30.0% | |
| !!! | TCTTCCATAATTTTTTTCCC+TGG | + | chr7_2:76751609-76751628 | None:intergenic | 30.0% |
| ACTAGTTAGAGATGTCATAA+TGG | + | chr7_2:76751643-76751662 | None:intergenic | 30.0% | |
| GTGACAAAAAGAACAATTGA+TGG | - | chr7_2:76752010-76752029 | Msa1077950:intron | 30.0% | |
| !! | ATGTAATGGATGAGAGTTAT+TGG | - | chr7_2:76752134-76752153 | Msa1077950:intron | 30.0% |
| ATTGAATATGACCAAGCAAA+TGG | + | chr7_2:76752190-76752209 | None:intergenic | 30.0% | |
| !! | ATTTTTCAACGGACTCAAAT+GGG | - | chr7_2:76752478-76752497 | Msa1077950:intron | 30.0% |
| !!! | TTTTGCTTACATTTTGGAAC+GGG | + | chr7_2:76752574-76752593 | None:intergenic | 30.0% |
| !!! | TTTGCTTATATTTTAGGACG+GGG | - | chr7_2:76752664-76752683 | Msa1077950:intron | 30.0% |
| CATTTCCAAAGCTAATTTGA+TGG | + | chr7_2:76752729-76752748 | None:intergenic | 30.0% | |
| TGTTAGTGTATCTAATTGTG+TGG | - | chr7_2:76752779-76752798 | Msa1077950:intron | 30.0% | |
| TGTATCTAATTGTGTGGATT+AGG | - | chr7_2:76752785-76752804 | Msa1077950:intron | 30.0% | |
| ! | GTATCTAATTGTGTGGATTA+GGG | - | chr7_2:76752786-76752805 | Msa1077950:intron | 30.0% |
| TGTTGAGTATGATGACTTAT+AGG | - | chr7_2:76752839-76752858 | Msa1077950:intron | 30.0% | |
| ! | AATGTTTGGCTCAAGTTTAA+GGG | + | chr7_2:76752910-76752929 | None:intergenic | 30.0% |
| ! | AAATGTTTGGCTCAAGTTTA+AGG | + | chr7_2:76752911-76752930 | None:intergenic | 30.0% |
| CAACTTGTATTTAAATACCG+CGG | + | chr7_2:76752984-76753003 | None:intergenic | 30.0% | |
| !! | AGATGTTTGATAGTGAAGTT+GGG | + | chr7_2:76753075-76753094 | None:intergenic | 30.0% |
| !! | AAGATGTTTGATAGTGAAGT+TGG | + | chr7_2:76753076-76753095 | None:intergenic | 30.0% |
| ACGACTTATCTTAGAAATCA+TGG | - | chr7_2:76753211-76753230 | Msa1077950:intron | 30.0% | |
| !! | TTAAAAGTGTCAAATCGGAT+AGG | + | chr7_2:76753548-76753567 | None:intergenic | 30.0% |
| ! | AATTAGTTTATGCAGTTGTG+TGG | - | chr7_2:76753855-76753874 | Msa1077950:CDS | 30.0% |
| GAATAGAAAATGGATGTTGT+AGG | - | chr7_2:76754047-76754066 | Msa1077950:CDS | 30.0% | |
| ATAGAAAATGGATGTTGTAG+GGG | - | chr7_2:76754049-76754068 | Msa1077950:CDS | 30.0% | |
| ! | TTATATCTCCCTTTTGGATT+AGG | + | chr7_2:76754158-76754177 | None:intergenic | 30.0% |
| ! | GTGTTGGTATATGAAATTCA+GGG | + | chr7_2:76754238-76754257 | None:intergenic | 30.0% |
| !! | AGTGTTGGTATATGAAATTC+AGG | + | chr7_2:76754239-76754258 | None:intergenic | 30.0% |
| !!! | TTTTTGGTTACAAGGCTAAA+AGG | - | chr7_2:76754509-76754528 | Msa1077950:intron | 30.0% |
| !! | TTTTGGTTACAAGGCTAAAA+GGG | - | chr7_2:76754510-76754529 | Msa1077950:intron | 30.0% |
| TGCCAAATATGATTAACTCC+AGG | - | chr7_2:76751588-76751607 | Msa1077950:CDS | 35.0% | |
| GCCAAATATGATTAACTCCA+GGG | - | chr7_2:76751589-76751608 | Msa1077950:CDS | 35.0% | |
| TCCCTGGAGTTAATCATATT+TGG | + | chr7_2:76751593-76751612 | None:intergenic | 35.0% | |
| CTTGTTGGTCAAGTATACAT+TGG | + | chr7_2:76751788-76751807 | None:intergenic | 35.0% | |
| TTGCTGCATTGAAACTTTCT+GGG | + | chr7_2:76751919-76751938 | None:intergenic | 35.0% | |
| ATTGCTGCATTGAAACTTTC+TGG | + | chr7_2:76751920-76751939 | None:intergenic | 35.0% | |
| AGTTTCAATGCAGCAATTGA+AGG | - | chr7_2:76751923-76751942 | Msa1077950:CDS | 35.0% | |
| ! | AGAACAATTGATGGAGCATT+AGG | - | chr7_2:76752019-76752038 | Msa1077950:intron | 35.0% |
| ! | GAGATTTGAAACCATTTGCT+TGG | - | chr7_2:76752176-76752195 | Msa1077950:intron | 35.0% |
| !! | TTCTAAAACAATGGCAGAGA+AGG | - | chr7_2:76752210-76752229 | Msa1077950:intron | 35.0% |
| !! | ACCTCTCTGTCTTTGTTATT+TGG | - | chr7_2:76752337-76752356 | Msa1077950:intron | 35.0% |
| ACCAAATAACAAAGACAGAG+AGG | + | chr7_2:76752341-76752360 | None:intergenic | 35.0% | |
| !! | CATTTTTCAACGGACTCAAA+TGG | - | chr7_2:76752477-76752496 | Msa1077950:intron | 35.0% |
| !! | GGATTTGAACTCCATTTTTG+AGG | - | chr7_2:76752499-76752518 | Msa1077950:intron | 35.0% |
| TGCATTAGATGTCAACTTAG+TGG | + | chr7_2:76752544-76752563 | None:intergenic | 35.0% | |
| !!! | TTTGCTTACATTTTGGAACG+GGG | + | chr7_2:76752573-76752592 | None:intergenic | 35.0% |
| !!! | TTGCTTATATTTTAGGACGG+GGG | - | chr7_2:76752665-76752684 | Msa1077950:intron | 35.0% |
| !! | ACTTATAGGTACTGAGAAGT+GGG | - | chr7_2:76752853-76752872 | Msa1077950:intron | 35.0% |
| !! | TTGAGCCAAACATTTGTTGT+GGG | - | chr7_2:76752916-76752935 | Msa1077950:intron | 35.0% |
| CAGTTCAATGATGCTATAGT+TGG | - | chr7_2:76752957-76752976 | Msa1077950:intron | 35.0% | |
| CGCGGTATTTAAATACAAGT+TGG | - | chr7_2:76752982-76753001 | Msa1077950:intron | 35.0% | |
| ! | GCTTTGTTCGTGTACATAAA+TGG | - | chr7_2:76753354-76753373 | Msa1077950:intron | 35.0% |
| TTGTTCGTGTACATAAATGG+TGG | - | chr7_2:76753357-76753376 | Msa1077950:intron | 35.0% | |
| TGTTCGTGTACATAAATGGT+GGG | - | chr7_2:76753358-76753377 | Msa1077950:intron | 35.0% | |
| TGATACCATCTTAGAAATCG+TGG | - | chr7_2:76753436-76753455 | Msa1077950:intron | 35.0% | |
| !! | ATCACATAAGTCGGTTTTGT+GGG | + | chr7_2:76753478-76753497 | None:intergenic | 35.0% |
| GCAATACTCATCACATAAGT+CGG | + | chr7_2:76753487-76753506 | None:intergenic | 35.0% | |
| AACCTCATCAAAATTGCAAC+TGG | - | chr7_2:76753577-76753596 | Msa1077950:intron | 35.0% | |
| !! | AACCAGTTGCAATTTTGATG+AGG | + | chr7_2:76753582-76753601 | None:intergenic | 35.0% |
| CAAAATTGCAACTGGTTGAT+TGG | - | chr7_2:76753585-76753604 | Msa1077950:intron | 35.0% | |
| ! | AACATTTGTTGGAAGATGTC+AGG | - | chr7_2:76753802-76753821 | Msa1077950:CDS | 35.0% |
| TATCATCAACATGCACCATA+TGG | + | chr7_2:76754103-76754122 | None:intergenic | 35.0% | |
| TTGAGCATCCTAATCCAAAA+GGG | - | chr7_2:76754147-76754166 | Msa1077950:CDS | 35.0% | |
| ! | GAGCAATTATATCTCCCTTT+TGG | + | chr7_2:76754164-76754183 | None:intergenic | 35.0% |
| !!! | AGCATCCATGAGTTTTTTTG+AGG | + | chr7_2:76754403-76754422 | None:intergenic | 35.0% |
| TCAAAAAAACTCATGGATGC+TGG | - | chr7_2:76754402-76754421 | Msa1077950:intron | 35.0% | |
| ATTCAGTGTTGCAAGGAAAA+GGG | - | chr7_2:76754468-76754487 | Msa1077950:intron | 35.0% | |
| ! | TGCATGAAGTGTTAATTCGG+CGG | - | chr7_2:76751712-76751731 | Msa1077950:intron | 40.0% |
| GTTGGTCAAGTATACATTGG+AGG | + | chr7_2:76751785-76751804 | None:intergenic | 40.0% | |
| AATCAATTGGAGTTGCAGTG+TGG | + | chr7_2:76751964-76751983 | None:intergenic | 40.0% | |
| CACTGCAACTCCAATTGATT+TGG | - | chr7_2:76751964-76751983 | Msa1077950:CDS | 40.0% | |
| CTAGAGTTTGGAGAACAACA+TGG | - | chr7_2:76752238-76752257 | Msa1077950:intron | 40.0% | |
| AAGGGTCCAAGAACAAAAGT+TGG | + | chr7_2:76752286-76752305 | None:intergenic | 40.0% | |
| ! | AGAGAGGTATAAATTGAGCC+AGG | + | chr7_2:76752325-76752344 | None:intergenic | 40.0% |
| !!! | TTGCTTACATTTTGGAACGG+GGG | + | chr7_2:76752572-76752591 | None:intergenic | 40.0% |
| TAGGGATCAGTTGGTCAATT+AGG | - | chr7_2:76752804-76752823 | Msa1077950:intron | 40.0% | |
| !! | GACTTATAGGTACTGAGAAG+TGG | - | chr7_2:76752852-76752871 | Msa1077950:intron | 40.0% |
| ! | CTTGAGCCAAACATTTGTTG+TGG | - | chr7_2:76752915-76752934 | Msa1077950:intron | 40.0% |
| !! | TGAGCCAAACATTTGTTGTG+GGG | - | chr7_2:76752917-76752936 | Msa1077950:intron | 40.0% |
| ATGGTTAGGCCTAATACAAC+CGG | - | chr7_2:76753230-76753249 | Msa1077950:intron | 40.0% | |
| TTAAGAGTCTCACATCGGAT+AGG | + | chr7_2:76753306-76753325 | None:intergenic | 40.0% | |
| GTGTGTTAAGAGTCTCACAT+CGG | + | chr7_2:76753311-76753330 | None:intergenic | 40.0% | |
| GAGTCTCTTCAAAATCCATC+AGG | + | chr7_2:76753416-76753435 | None:intergenic | 40.0% | |
| ! | CCTAACCACGATTTCTAAGA+TGG | + | chr7_2:76753444-76753463 | None:intergenic | 40.0% |
| CCATCTTAGAAATCGTGGTT+AGG | - | chr7_2:76753441-76753460 | Msa1077950:intron | 40.0% | |
| !! | CATCACATAAGTCGGTTTTG+TGG | + | chr7_2:76753479-76753498 | None:intergenic | 40.0% |
| CTTGAGCATCCTAATCCAAA+AGG | - | chr7_2:76754146-76754165 | Msa1077950:CDS | 40.0% | |
| ACTAGAACTCACTCTAGTGT+TGG | + | chr7_2:76754254-76754273 | None:intergenic | 40.0% | |
| ! | TTTTGTTCATAGGGAGCTGA+AGG | - | chr7_2:76754347-76754366 | Msa1077950:intron | 40.0% |
| AGGGAGCTGAAGGAAATTAA+AGG | - | chr7_2:76754357-76754376 | Msa1077950:intron | 40.0% | |
| TATCGTCCAACATTTCCTCA+AGG | + | chr7_2:76754446-76754465 | None:intergenic | 40.0% | |
| GATTCAGTGTTGCAAGGAAA+AGG | - | chr7_2:76754467-76754486 | Msa1077950:intron | 40.0% | |
| GGTCAAGTATACATTGGAGG+AGG | + | chr7_2:76751782-76751801 | None:intergenic | 45.0% | |
| ACAGAGCGCAAGAAAGATGT+TGG | - | chr7_2:76751830-76751849 | Msa1077950:CDS | 45.0% | |
| !! | ATGCACCTGGAAGTTTTGTG+AGG | + | chr7_2:76751859-76751878 | None:intergenic | 45.0% |
| !!! | TTTAGCTTTTGGGATGCACC+TGG | + | chr7_2:76751872-76751891 | None:intergenic | 45.0% |
| GCAGCAATTGAAGGATGCAA+AGG | - | chr7_2:76751932-76751951 | Msa1077950:CDS | 45.0% | |
| CAAGTGCTTCAGCAGTGTAT+TGG | - | chr7_2:76752095-76752114 | Msa1077950:intron | 45.0% | |
| !! | GAGAAGGCTGTTCTAGAGTT+TGG | - | chr7_2:76752226-76752245 | Msa1077950:intron | 45.0% |
| GGACGCTTAGGACAAATGAA+GGG | + | chr7_2:76752304-76752323 | None:intergenic | 45.0% | |
| AGGACGCTTAGGACAAATGA+AGG | + | chr7_2:76752305-76752324 | None:intergenic | 45.0% | |
| TTCATTTGTCCTAAGCGTCC+TGG | - | chr7_2:76752304-76752323 | Msa1077950:intron | 45.0% | |
| TAAATTGAGCCAGGACGCTT+AGG | + | chr7_2:76752316-76752335 | None:intergenic | 45.0% | |
| !!! | TGCTTACATTTTGGAACGGG+GGG | + | chr7_2:76752571-76752590 | None:intergenic | 45.0% |
| !! | TGTGTGGATTAGGGATCAGT+TGG | - | chr7_2:76752795-76752814 | Msa1077950:intron | 45.0% |
| !! | ATAGGTACTGAGAAGTGGGA+AGG | - | chr7_2:76752857-76752876 | Msa1077950:intron | 45.0% |
| ! | TTTGGCTCAAGTTTAAGGGC+AGG | + | chr7_2:76752906-76752925 | None:intergenic | 45.0% |
| TCGTCCCCACAACAAATGTT+TGG | + | chr7_2:76752924-76752943 | None:intergenic | 45.0% | |
| AGCATCATTGAACTGTACCG+CGG | + | chr7_2:76752952-76752971 | None:intergenic | 45.0% | |
| ATGATGCTATAGTTGGACCG+CGG | - | chr7_2:76752964-76752983 | Msa1077950:intron | 45.0% | |
| CGAACAAAGCCCAATAGTGT+TGG | + | chr7_2:76753344-76753363 | None:intergenic | 45.0% | |
| ! | TCGTGTACATAAATGGTGGG+TGG | - | chr7_2:76753361-76753380 | Msa1077950:intron | 45.0% |
| GTGTCAAATCGGATAGGAGA+TGG | + | chr7_2:76753542-76753561 | None:intergenic | 45.0% | |
| GTAGGGGACAAGAATCCATT+TGG | - | chr7_2:76754065-76754084 | Msa1077950:CDS | 45.0% | |
| ACACAGCCTTGAGGAAATGT+TGG | - | chr7_2:76754437-76754456 | Msa1077950:intron | 45.0% | |
| CGATACGATTCAGTGTTGCA+AGG | - | chr7_2:76754461-76754480 | Msa1077950:intron | 45.0% | |
| !!! | ATTGTTTTTTTAATAAAAAT+TGG | - | chr7_2:76752414-76752433 | Msa1077950:intron | 5.0% |
| !!! | TTGTTTTTTTAATAAAAATT+GGG | - | chr7_2:76752415-76752434 | Msa1077950:intron | 5.0% |
| GGCTTCCTCACAAAACTTCC+AGG | - | chr7_2:76751851-76751870 | Msa1077950:CDS | 50.0% | |
| CATCATTGAACTGTACCGCG+GGG | + | chr7_2:76752950-76752969 | None:intergenic | 50.0% | |
| GCATCATTGAACTGTACCGC+GGG | + | chr7_2:76752951-76752970 | None:intergenic | 50.0% | |
| CCTCACAAGCCGGTTGTATT+AGG | + | chr7_2:76753242-76753261 | None:intergenic | 50.0% | |
| !! | CCTAATACAACCGGCTTGTG+AGG | - | chr7_2:76753239-76753258 | Msa1077950:intron | 50.0% |
| GTCTCACATCGGATAGGAGA+TGG | + | chr7_2:76753300-76753319 | None:intergenic | 50.0% | |
| !! | CAATAGTGTTGGTCGTGAGG+GGG | + | chr7_2:76753333-76753352 | None:intergenic | 50.0% |
| !! | CCAATAGTGTTGGTCGTGAG+GGG | + | chr7_2:76753334-76753353 | None:intergenic | 50.0% |
| !! | CCCAATAGTGTTGGTCGTGA+GGG | + | chr7_2:76753335-76753354 | None:intergenic | 50.0% |
| CCCTCACGACCAACACTATT+GGG | - | chr7_2:76753332-76753351 | Msa1077950:intron | 50.0% | |
| !! | AATGGTGGGTGGTCTGATAG+CGG | - | chr7_2:76753372-76753391 | Msa1077950:intron | 50.0% |
| !! | GTCTGATAGCGGAAACCTGA+TGG | - | chr7_2:76753383-76753402 | Msa1077950:intron | 50.0% |
| TGGAGACGAGAGAAGCCAAA+TGG | + | chr7_2:76754083-76754102 | None:intergenic | 50.0% | |
| TGGCTTCTCTCGTCTCCATA+TGG | - | chr7_2:76754085-76754104 | Msa1077950:CDS | 50.0% | |
| CGAGTTCAAACACAGCCTTG+AGG | - | chr7_2:76754428-76754447 | Msa1077950:intron | 50.0% | |
| !! | TACAACCGGCTTGTGAGGTG+AGG | - | chr7_2:76753244-76753263 | Msa1077950:intron | 55.0% |
| GCAATCCTCACCTCACAAGC+CGG | + | chr7_2:76753252-76753271 | None:intergenic | 55.0% | |
| CCCCTCACGACCAACACTAT+TGG | - | chr7_2:76753331-76753350 | Msa1077950:intron | 55.0% | |
| !! | GCCCAATAGTGTTGGTCGTG+AGG | + | chr7_2:76753336-76753355 | None:intergenic | 55.0% |
| AGCGGAAACCTGATGGCATG+TGG | - | chr7_2:76753390-76753409 | Msa1077950:intron | 55.0% | |
| CCATCAGGCCACATGCCATC+AGG | + | chr7_2:76753401-76753420 | None:intergenic | 60.0% | |
| CCTGATGGCATGTGGCCTGA+TGG | - | chr7_2:76753398-76753417 | Msa1077950:intron | 60.0% | |
| TTGTGGGGACGACGTCCCCG+CGG | - | chr7_2:76752932-76752951 | Msa1077950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 76751472 | 76754599 | 76751472 | ID=Msa1077950;Name=Msa1077950 |
| chr7_2 | mRNA | 76751472 | 76754599 | 76751472 | ID=Msa1077950-mRNA-1;Parent=Msa1077950;Name=Msa1077950-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.66|0.25|0.75|1|1|4|99|299 |
| chr7_2 | exon | 76751472 | 76751712 | 76751472 | ID=Msa1077950-mRNA-1:exon:18640;Parent=Msa1077950-mRNA-1 |
| chr7_2 | exon | 76751810 | 76752002 | 76751810 | ID=Msa1077950-mRNA-1:exon:18639;Parent=Msa1077950-mRNA-1 |
| chr7_2 | exon | 76753713 | 76754237 | 76753713 | ID=Msa1077950-mRNA-1:exon:18638;Parent=Msa1077950-mRNA-1 |
| chr7_2 | exon | 76754560 | 76754599 | 76754560 | ID=Msa1077950-mRNA-1:exon:18637;Parent=Msa1077950-mRNA-1 |
| chr7_2 | CDS | 76754560 | 76754599 | 76754560 | ID=Msa1077950-mRNA-1:cds;Parent=Msa1077950-mRNA-1 |
| chr7_2 | CDS | 76753713 | 76754237 | 76753713 | ID=Msa1077950-mRNA-1:cds;Parent=Msa1077950-mRNA-1 |
| chr7_2 | CDS | 76751810 | 76752002 | 76751810 | ID=Msa1077950-mRNA-1:cds;Parent=Msa1077950-mRNA-1 |
| chr7_2 | CDS | 76751571 | 76751712 | 76751571 | ID=Msa1077950-mRNA-1:cds;Parent=Msa1077950-mRNA-1 |
| chr7_2 | three_prime_UTR | 76751472 | 76751570 | 76751472 | ID=Msa1077950-mRNA-1:three_prime_utr;Parent=Msa1077950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
