Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506160 | XP_013460449.1 | 94.191 | 482 | 28 | 0 | 1 | 482 | 1 | 482 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506160 | sp|Q6WG30|T5H_TAXCU | 38.170 | 448 | 273 | 4 | 33 | 477 | 52 | 498 | 4.51e-114 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506160 | A0A072UY40 | 94.191 | 482 | 28 | 0 | 1 | 482 | 1 | 482 | 0.0 | 941 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0506160 | 0.820810 | 5.633858e-53 | -8.615850e-47 |
| Msa0063540 | Msa0506160 | 0.805084 | 1.583666e-49 | -8.615850e-47 |
| Msa0150920 | Msa0506160 | 0.805696 | 1.178629e-49 | -8.615850e-47 |
| Msa0163340 | Msa0506160 | 0.806356 | 8.561332e-50 | -8.615850e-47 |
| Msa0209060 | Msa0506160 | 0.805949 | 1.042765e-49 | -8.615850e-47 |
| Msa0209520 | Msa0506160 | 0.808748 | 2.659089e-50 | -8.615850e-47 |
| Msa0366510 | Msa0506160 | 0.878782 | 2.126017e-69 | -8.615850e-47 |
| Msa0374040 | Msa0506160 | 0.801112 | 1.050167e-48 | -8.615850e-47 |
| Msa0414480 | Msa0506160 | 0.836364 | 9.770285e-57 | -8.615850e-47 |
| Msa0459300 | Msa0506160 | 0.822131 | 2.791444e-53 | -8.615850e-47 |
| Msa0464310 | Msa0506160 | 0.805995 | 1.019885e-49 | -8.615850e-47 |
| Msa0272210 | Msa0506160 | 0.811225 | 7.787654e-51 | -8.615850e-47 |
| Msa0506160 | Msa0515130 | 0.813817 | 2.112455e-51 | -8.615850e-47 |
| Msa0506160 | Msa0515150 | 0.805881 | 1.077551e-49 | -8.615850e-47 |
| Msa0506160 | Msa0535570 | 0.831101 | 2.020400e-55 | -8.615850e-47 |
| Msa0506160 | Msa0591490 | 0.840965 | 6.327793e-58 | -8.615850e-47 |
| Msa0506160 | Msa0594630 | 0.808089 | 3.675412e-50 | -8.615850e-47 |
| Msa0506160 | Msa0631700 | 0.819532 | 1.105448e-52 | -8.615850e-47 |
| Msa0506160 | Msa0670360 | 0.804655 | 1.946402e-49 | -8.615850e-47 |
| Msa0506160 | Msa0741360 | 0.818824 | 1.601814e-52 | -8.615850e-47 |
| Msa0506160 | Msa0814160 | 0.812374 | 4.378689e-51 | -8.615850e-47 |
| Msa0506160 | Msa0861730 | 0.814857 | 1.244416e-51 | -8.615850e-47 |
| Msa0506160 | Msa0867080 | 0.803213 | 3.881599e-49 | -8.615850e-47 |
| Msa0506160 | Msa0895420 | 0.800519 | 1.387725e-48 | -8.615850e-47 |
| Msa0506160 | Msa0896920 | 0.802878 | 4.552402e-49 | -8.615850e-47 |
| Msa0506160 | Msa0946010 | 0.821017 | 5.047957e-53 | -8.615850e-47 |
| Msa0506160 | Msa0964510 | 0.803742 | 3.014612e-49 | -8.615850e-47 |
| Msa0506160 | Msa1018590 | 0.814230 | 1.712509e-51 | -8.615850e-47 |
| Msa0506160 | Msa1022510 | 0.814419 | 1.555495e-51 | -8.615850e-47 |
| Msa0506160 | Msa1030320 | 0.807284 | 5.449687e-50 | -8.615850e-47 |
| Msa0506160 | Msa1048350 | 0.817516 | 3.166659e-52 | -8.615850e-47 |
| Msa0506160 | Msa1048400 | 0.801459 | 8.916267e-49 | -8.615850e-47 |
| Msa0506160 | Msa1061670 | 0.805559 | 1.259237e-49 | -8.615850e-47 |
| Msa0506160 | Msa1079820 | 0.805715 | 1.167842e-49 | -8.615850e-47 |
| Msa0506160 | Msa1106680 | 0.801948 | 7.074751e-49 | -8.615850e-47 |
| Msa0506160 | Msa1106960 | 0.802779 | 4.770371e-49 | -8.615850e-47 |
| Msa0506160 | Msa1147030 | 0.826829 | 2.187888e-54 | -8.615850e-47 |
| Msa0506160 | Msa1148210 | 0.833607 | 4.838284e-56 | -8.615850e-47 |
| Msa0506160 | Msa1167960 | 0.801978 | 6.975972e-49 | -8.615850e-47 |
| Msa0506160 | Msa1231720 | 0.827989 | 1.153573e-54 | -8.615850e-47 |
| Msa0506160 | Msa1355340 | 0.814120 | 1.811022e-51 | -8.615850e-47 |
| Msa0506160 | Msa1411550 | 0.804051 | 2.600953e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506160 | MtrunA17_Chr3g0107511 | 94.191 | 482 | 28 | 0 | 1 | 482 | 1 | 482 | 0.0 | 941 |
| Msa0506160 | MtrunA17_Chr3g0107501 | 80.249 | 481 | 95 | 0 | 1 | 481 | 1 | 481 | 0.0 | 802 |
| Msa0506160 | MtrunA17_Chr5g0443731 | 41.648 | 449 | 258 | 4 | 30 | 477 | 26 | 471 | 8.58e-120 | 359 |
| Msa0506160 | MtrunA17_Chr5g0443401 | 34.917 | 484 | 301 | 6 | 1 | 477 | 1 | 477 | 5.97e-106 | 323 |
| Msa0506160 | MtrunA17_Chr8g0380471 | 36.975 | 476 | 285 | 8 | 8 | 476 | 8 | 475 | 9.96e-103 | 315 |
| Msa0506160 | MtrunA17_Chr8g0388921 | 35.169 | 472 | 298 | 5 | 8 | 477 | 12 | 477 | 2.03e-102 | 315 |
| Msa0506160 | MtrunA17_Chr5g0408181 | 32.568 | 479 | 294 | 12 | 8 | 477 | 5 | 463 | 1.70e-73 | 239 |
| Msa0506160 | MtrunA17_Chr4g0044851 | 31.222 | 442 | 291 | 5 | 33 | 473 | 37 | 466 | 1.58e-69 | 229 |
| Msa0506160 | MtrunA17_Chr8g0369791 | 33.913 | 460 | 280 | 13 | 20 | 474 | 22 | 462 | 4.92e-69 | 228 |
| Msa0506160 | MtrunA17_Chr1g0153371 | 31.410 | 468 | 308 | 7 | 8 | 473 | 9 | 465 | 1.87e-68 | 226 |
| Msa0506160 | MtrunA17_Chr1g0164371 | 31.277 | 470 | 309 | 6 | 6 | 474 | 17 | 473 | 6.61e-68 | 225 |
| Msa0506160 | MtrunA17_Chr5g0403931 | 30.041 | 486 | 326 | 7 | 3 | 480 | 4 | 483 | 3.10e-67 | 223 |
| Msa0506160 | MtrunA17_Chr8g0380931 | 29.956 | 454 | 299 | 9 | 30 | 474 | 59 | 502 | 6.18e-67 | 223 |
| Msa0506160 | MtrunA17_Chr4g0044841 | 30.719 | 459 | 303 | 8 | 19 | 474 | 23 | 469 | 6.46e-64 | 214 |
| Msa0506160 | MtrunA17_Chr8g0341951 | 28.509 | 456 | 315 | 5 | 8 | 462 | 12 | 457 | 4.90e-60 | 204 |
| Msa0506160 | MtrunA17_Chr2g0293411 | 27.500 | 480 | 338 | 7 | 7 | 480 | 15 | 490 | 1.12e-58 | 201 |
| Msa0506160 | MtrunA17_Chr3g0141801 | 28.511 | 470 | 312 | 8 | 5 | 463 | 13 | 469 | 2.00e-58 | 200 |
| Msa0506160 | MtrunA17_Chr5g0397971 | 26.115 | 471 | 337 | 5 | 9 | 474 | 3 | 467 | 4.47e-58 | 199 |
| Msa0506160 | MtrunA17_Chr7g0226771 | 28.194 | 454 | 310 | 7 | 1 | 449 | 1 | 443 | 7.07e-56 | 193 |
| Msa0506160 | MtrunA17_Chr8g0381541 | 29.372 | 446 | 295 | 11 | 33 | 467 | 43 | 479 | 1.03e-55 | 193 |
| Msa0506160 | MtrunA17_Chr5g0400421 | 28.322 | 459 | 310 | 10 | 25 | 474 | 39 | 487 | 1.10e-54 | 190 |
| Msa0506160 | MtrunA17_Chr5g0400411 | 28.194 | 454 | 316 | 7 | 25 | 474 | 39 | 486 | 1.73e-54 | 189 |
| Msa0506160 | MtrunA17_Chr8g0373441 | 29.750 | 400 | 266 | 6 | 12 | 405 | 14 | 404 | 3.87e-54 | 187 |
| Msa0506160 | MtrunA17_Chr2g0293421 | 27.655 | 452 | 317 | 7 | 32 | 479 | 44 | 489 | 9.05e-54 | 188 |
| Msa0506160 | MtrunA17_Chr8g0381571 | 29.787 | 423 | 277 | 11 | 33 | 444 | 43 | 456 | 3.90e-53 | 186 |
| Msa0506160 | MtrunA17_Chr3g0113321 | 28.188 | 447 | 299 | 8 | 33 | 468 | 29 | 464 | 4.63e-53 | 186 |
| Msa0506160 | MtrunA17_Chr8g0372711 | 27.171 | 449 | 310 | 9 | 8 | 450 | 20 | 457 | 1.86e-50 | 179 |
| Msa0506160 | MtrunA17_Chr7g0219961 | 26.964 | 471 | 320 | 12 | 7 | 474 | 11 | 460 | 4.34e-50 | 177 |
| Msa0506160 | MtrunA17_Chr8g0372411 | 28.000 | 425 | 285 | 8 | 34 | 449 | 40 | 452 | 1.22e-48 | 174 |
| Msa0506160 | MtrunA17_Chr3g0078411 | 26.793 | 474 | 316 | 11 | 7 | 473 | 11 | 460 | 4.30e-48 | 172 |
| Msa0506160 | MtrunA17_Chr8g0339861 | 29.955 | 444 | 290 | 9 | 33 | 467 | 45 | 476 | 4.31e-48 | 172 |
| Msa0506160 | MtrunA17_Chr6g0455461 | 26.793 | 474 | 316 | 12 | 7 | 473 | 11 | 460 | 1.57e-47 | 170 |
| Msa0506160 | MtrunA17_Chr3g0089361 | 26.240 | 484 | 319 | 14 | 5 | 473 | 13 | 473 | 7.78e-42 | 155 |
| Msa0506160 | MtrunA17_Chr3g0089351 | 25.485 | 412 | 276 | 12 | 72 | 473 | 1 | 391 | 8.13e-40 | 148 |
| Msa0506160 | MtrunA17_Chr6g0478161 | 25.870 | 460 | 314 | 9 | 7 | 452 | 20 | 466 | 2.02e-38 | 146 |
| Msa0506160 | MtrunA17_Chr8g0381551 | 27.070 | 314 | 200 | 12 | 33 | 335 | 43 | 338 | 2.78e-24 | 103 |
| Msa0506160 | MtrunA17_Chr5g0404881 | 31.304 | 230 | 140 | 7 | 7 | 226 | 8 | 229 | 1.75e-22 | 96.3 |
| Msa0506160 | MtrunA17_Chr1g0161671 | 24.601 | 313 | 222 | 7 | 7 | 312 | 6 | 311 | 2.48e-22 | 97.4 |
| Msa0506160 | MtrunA17_Chr8g0334891 | 26.207 | 435 | 274 | 18 | 24 | 435 | 30 | 440 | 2.10e-21 | 97.1 |
| Msa0506160 | MtrunA17_Chr6g0458561 | 24.116 | 481 | 295 | 18 | 8 | 440 | 28 | 486 | 4.95e-21 | 95.9 |
| Msa0506160 | MtrunA17_Chr4g0047631 | 23.992 | 471 | 316 | 16 | 7 | 449 | 22 | 478 | 5.31e-21 | 95.9 |
| Msa0506160 | MtrunA17_Chr6g0463551 | 34.831 | 178 | 109 | 3 | 199 | 370 | 13 | 189 | 2.06e-20 | 89.4 |
| Msa0506160 | MtrunA17_Chr4g0000171 | 25.704 | 284 | 201 | 6 | 27 | 305 | 37 | 315 | 2.48e-20 | 92.0 |
| Msa0506160 | MtrunA17_Chr8g0334941 | 28.185 | 259 | 161 | 9 | 193 | 435 | 36 | 285 | 6.52e-20 | 90.9 |
| Msa0506160 | MtrunA17_Chr4g0058231 | 23.819 | 487 | 306 | 17 | 7 | 449 | 2 | 467 | 8.80e-20 | 92.0 |
| Msa0506160 | MtrunA17_Chr2g0314721 | 24.797 | 492 | 311 | 15 | 8 | 463 | 19 | 487 | 3.60e-19 | 90.1 |
| Msa0506160 | MtrunA17_Chr4g0047691 | 23.544 | 412 | 285 | 12 | 62 | 449 | 76 | 481 | 3.72e-19 | 90.1 |
| Msa0506160 | MtrunA17_Chr4g0000161 | 25.455 | 275 | 195 | 6 | 24 | 293 | 34 | 303 | 4.94e-19 | 88.2 |
| Msa0506160 | MtrunA17_Chr5g0404861 | 31.875 | 160 | 107 | 1 | 317 | 476 | 1 | 158 | 7.51e-19 | 83.6 |
| Msa0506160 | MtrunA17_Chr5g0436981 | 32.000 | 150 | 94 | 2 | 33 | 179 | 28 | 172 | 7.98e-19 | 84.3 |
| Msa0506160 | MtrunA17_Chr2g0286091 | 21.856 | 485 | 328 | 15 | 28 | 479 | 36 | 502 | 8.19e-19 | 89.4 |
| Msa0506160 | MtrunA17_Chr4g0013471 | 25.890 | 309 | 197 | 6 | 27 | 319 | 37 | 329 | 9.37e-19 | 88.2 |
| Msa0506160 | MtrunA17_Chr2g0314731 | 24.330 | 485 | 322 | 17 | 7 | 463 | 9 | 476 | 5.63e-18 | 86.3 |
| Msa0506160 | MtrunA17_Chr4g0047661 | 23.517 | 472 | 323 | 16 | 7 | 449 | 21 | 483 | 6.52e-18 | 86.3 |
| Msa0506160 | MtrunA17_Chr8g0339331 | 23.501 | 417 | 271 | 14 | 68 | 445 | 71 | 478 | 7.26e-18 | 86.3 |
| Msa0506160 | MtrunA17_Chr0c19g0493771 | 29.897 | 194 | 121 | 4 | 256 | 444 | 430 | 613 | 9.18e-18 | 86.3 |
| Msa0506160 | MtrunA17_Chr1g0197881 | 24.335 | 489 | 312 | 16 | 1 | 456 | 4 | 467 | 6.55e-17 | 83.2 |
| Msa0506160 | MtrunA17_Chr1g0176831 | 25.000 | 488 | 313 | 16 | 8 | 463 | 40 | 506 | 7.72e-17 | 83.2 |
| Msa0506160 | MtrunA17_Chr4g0000151 | 33.333 | 129 | 83 | 2 | 338 | 466 | 6 | 131 | 1.34e-16 | 76.6 |
| Msa0506160 | MtrunA17_Chr2g0310381 | 20.632 | 475 | 321 | 13 | 7 | 443 | 1 | 457 | 1.36e-16 | 82.0 |
| Msa0506160 | MtrunA17_Chr2g0310391 | 20.763 | 472 | 322 | 13 | 7 | 443 | 3 | 457 | 1.88e-16 | 81.6 |
| Msa0506160 | MtrunA17_Chr3g0116741 | 28.079 | 203 | 131 | 6 | 255 | 449 | 286 | 481 | 1.98e-16 | 81.6 |
| Msa0506160 | MtrunA17_Chr1g0197891 | 23.663 | 486 | 308 | 16 | 7 | 456 | 10 | 468 | 2.95e-16 | 81.3 |
| Msa0506160 | MtrunA17_Chr8g0382901 | 22.151 | 465 | 320 | 13 | 7 | 453 | 5 | 445 | 3.66e-16 | 81.6 |
| Msa0506160 | MtrunA17_Chr8g0382901 | 21.748 | 469 | 318 | 14 | 15 | 453 | 475 | 924 | 4.18e-15 | 78.2 |
| Msa0506160 | MtrunA17_Chr5g0405001 | 22.245 | 490 | 308 | 14 | 6 | 449 | 17 | 479 | 4.72e-16 | 80.5 |
| Msa0506160 | MtrunA17_Chr5g0395321 | 24.439 | 446 | 302 | 14 | 7 | 432 | 16 | 446 | 6.13e-16 | 80.5 |
| Msa0506160 | MtrunA17_Chr8g0344151 | 23.478 | 460 | 294 | 15 | 32 | 453 | 35 | 474 | 6.50e-16 | 80.1 |
| Msa0506160 | MtrunA17_Chr6g0472311 | 29.902 | 204 | 130 | 5 | 254 | 450 | 286 | 483 | 6.96e-16 | 80.1 |
| Msa0506160 | MtrunA17_Chr1g0197851 | 24.131 | 489 | 314 | 16 | 1 | 456 | 4 | 468 | 7.33e-16 | 80.1 |
| Msa0506160 | MtrunA17_Chr4g0058191 | 24.160 | 476 | 292 | 18 | 15 | 449 | 9 | 456 | 1.03e-15 | 79.3 |
| Msa0506160 | MtrunA17_Chr4g0047641 | 27.861 | 201 | 136 | 4 | 254 | 449 | 286 | 482 | 2.00e-15 | 78.6 |
| Msa0506160 | MtrunA17_Chr6g0463541 | 34.783 | 92 | 57 | 1 | 367 | 458 | 3 | 91 | 2.23e-15 | 72.0 |
| Msa0506160 | MtrunA17_Chr1g0164321 | 22.400 | 375 | 236 | 14 | 152 | 479 | 183 | 549 | 2.36e-15 | 78.6 |
| Msa0506160 | MtrunA17_Chr5g0437001 | 36.111 | 108 | 68 | 1 | 338 | 444 | 1 | 108 | 3.24e-15 | 73.2 |
| Msa0506160 | MtrunA17_Chr5g0401691 | 22.222 | 513 | 333 | 21 | 7 | 479 | 25 | 511 | 4.05e-15 | 77.8 |
| Msa0506160 | MtrunA17_Chr4g0058281 | 29.240 | 171 | 112 | 4 | 283 | 449 | 314 | 479 | 6.92e-15 | 77.0 |
| Msa0506160 | MtrunA17_Chr3g0104351 | 24.342 | 304 | 204 | 9 | 157 | 435 | 171 | 473 | 9.29e-15 | 76.6 |
| Msa0506160 | MtrunA17_Chr1g0197871 | 31.280 | 211 | 131 | 5 | 252 | 456 | 266 | 468 | 1.33e-14 | 75.9 |
| Msa0506160 | MtrunA17_Chr8g0351801 | 28.837 | 215 | 129 | 5 | 252 | 449 | 277 | 484 | 1.62e-14 | 75.9 |
| Msa0506160 | MtrunA17_Chr6g0463561 | 30.714 | 140 | 95 | 2 | 8 | 146 | 14 | 152 | 1.91e-14 | 72.0 |
| Msa0506160 | MtrunA17_Chr3g0101671 | 23.789 | 475 | 304 | 18 | 9 | 440 | 5 | 464 | 2.68e-14 | 75.1 |
| Msa0506160 | MtrunA17_Chr8g0381561 | 32.407 | 108 | 71 | 1 | 337 | 444 | 2 | 107 | 2.72e-14 | 69.7 |
| Msa0506160 | MtrunA17_Chr4g0030701 | 30.435 | 184 | 118 | 2 | 284 | 461 | 311 | 490 | 4.13e-14 | 74.7 |
| Msa0506160 | MtrunA17_Chr1g0207841 | 25.871 | 402 | 237 | 15 | 97 | 461 | 115 | 492 | 7.37e-14 | 73.9 |
| Msa0506160 | MtrunA17_Chr4g0056951 | 26.267 | 217 | 147 | 6 | 240 | 450 | 269 | 478 | 9.13e-14 | 73.6 |
| Msa0506160 | MtrunA17_Chr6g0451681 | 25.822 | 213 | 146 | 4 | 272 | 476 | 266 | 474 | 1.16e-13 | 73.2 |
| Msa0506160 | MtrunA17_Chr3g0101571 | 22.013 | 477 | 315 | 15 | 33 | 475 | 36 | 489 | 1.35e-13 | 72.8 |
| Msa0506160 | MtrunA17_Chr7g0260831 | 24.740 | 384 | 223 | 17 | 101 | 432 | 85 | 454 | 1.41e-13 | 72.8 |
| Msa0506160 | MtrunA17_Chr1g0174441 | 20.669 | 508 | 333 | 16 | 7 | 468 | 30 | 513 | 1.42e-13 | 72.8 |
| Msa0506160 | MtrunA17_Chr5g0445451 | 21.007 | 457 | 311 | 18 | 9 | 432 | 10 | 449 | 1.43e-13 | 72.8 |
| Msa0506160 | MtrunA17_Chr2g0313821 | 21.242 | 499 | 305 | 16 | 1 | 436 | 1 | 474 | 2.40e-13 | 72.0 |
| Msa0506160 | MtrunA17_Chr2g0280121 | 22.976 | 457 | 293 | 19 | 67 | 477 | 66 | 509 | 2.40e-13 | 72.0 |
| Msa0506160 | MtrunA17_Chr3g0101711 | 22.560 | 461 | 308 | 16 | 6 | 432 | 8 | 453 | 2.62e-13 | 72.0 |
| Msa0506160 | MtrunA17_Chr4g0053621 | 21.704 | 493 | 316 | 16 | 7 | 456 | 5 | 470 | 3.54e-13 | 71.6 |
| Msa0506160 | MtrunA17_Chr4g0038271 | 24.171 | 211 | 147 | 5 | 235 | 432 | 304 | 514 | 4.14e-13 | 71.6 |
| Msa0506160 | MtrunA17_Chr5g0445381 | 23.581 | 458 | 304 | 17 | 4 | 432 | 40 | 480 | 4.21e-13 | 71.6 |
| Msa0506160 | MtrunA17_Chr4g0074581 | 21.909 | 461 | 290 | 16 | 30 | 446 | 66 | 500 | 5.03e-13 | 71.2 |
| Msa0506160 | MtrunA17_Chr5g0403351 | 22.746 | 488 | 323 | 16 | 5 | 456 | 10 | 479 | 5.04e-13 | 71.2 |
| Msa0506160 | MtrunA17_Chr4g0058211 | 27.485 | 171 | 115 | 4 | 283 | 449 | 19 | 184 | 5.92e-13 | 68.2 |
| Msa0506160 | MtrunA17_Chr4g0035921 | 21.501 | 493 | 329 | 17 | 7 | 453 | 3 | 483 | 7.44e-13 | 70.5 |
| Msa0506160 | MtrunA17_Chr2g0334021 | 20.825 | 485 | 317 | 16 | 39 | 480 | 41 | 501 | 8.00e-13 | 70.5 |
| Msa0506160 | MtrunA17_Chr1g0160861 | 24.516 | 310 | 210 | 9 | 166 | 456 | 10 | 314 | 1.04e-12 | 69.3 |
| Msa0506160 | MtrunA17_Chr7g0235551 | 24.000 | 175 | 121 | 2 | 283 | 449 | 304 | 474 | 1.35e-12 | 69.7 |
| Msa0506160 | MtrunA17_Chr8g0356001 | 24.319 | 477 | 309 | 19 | 9 | 449 | 12 | 472 | 1.75e-12 | 69.3 |
| Msa0506160 | MtrunA17_Chr3g0089381 | 25.287 | 174 | 122 | 3 | 197 | 370 | 27 | 192 | 2.14e-12 | 66.6 |
| Msa0506160 | MtrunA17_Chr8g0372251 | 22.611 | 429 | 284 | 12 | 34 | 428 | 36 | 450 | 2.19e-12 | 69.3 |
| Msa0506160 | MtrunA17_Chr1g0151221 | 26.172 | 256 | 163 | 10 | 216 | 458 | 265 | 507 | 3.23e-12 | 68.6 |
| Msa0506160 | MtrunA17_Chr4g0004481 | 25.269 | 186 | 134 | 3 | 255 | 435 | 264 | 449 | 3.53e-12 | 68.6 |
| Msa0506160 | MtrunA17_Chr6g0451641 | 28.571 | 182 | 121 | 3 | 272 | 448 | 306 | 483 | 3.59e-12 | 68.6 |
| Msa0506160 | MtrunA17_Chr4g0026941 | 25.856 | 263 | 173 | 8 | 225 | 477 | 289 | 539 | 3.72e-12 | 68.6 |
| Msa0506160 | MtrunA17_Chr4g0046681 | 26.027 | 219 | 128 | 8 | 283 | 482 | 31 | 234 | 4.64e-12 | 65.9 |
| Msa0506160 | MtrunA17_Chr5g0445461 | 21.030 | 466 | 300 | 17 | 9 | 432 | 10 | 449 | 5.11e-12 | 67.8 |
| Msa0506160 | MtrunA17_Chr5g0445421 | 23.503 | 451 | 292 | 18 | 4 | 432 | 83 | 502 | 8.55e-12 | 67.4 |
| Msa0506160 | MtrunA17_Chr2g0307291 | 26.009 | 223 | 140 | 8 | 229 | 436 | 264 | 476 | 1.04e-11 | 67.0 |
| Msa0506160 | MtrunA17_Chr4g0039391 | 24.138 | 203 | 148 | 3 | 256 | 456 | 277 | 475 | 1.15e-11 | 67.0 |
| Msa0506160 | MtrunA17_Chr4g0030711 | 27.869 | 183 | 118 | 4 | 284 | 458 | 314 | 490 | 1.17e-11 | 67.0 |
| Msa0506160 | MtrunA17_Chr2g0313751 | 25.182 | 274 | 181 | 8 | 206 | 462 | 266 | 532 | 1.22e-11 | 67.0 |
| Msa0506160 | MtrunA17_Chr5g0445531 | 20.554 | 433 | 291 | 14 | 32 | 432 | 37 | 448 | 1.95e-11 | 66.2 |
| Msa0506160 | MtrunA17_Chr3g0101831 | 21.903 | 452 | 306 | 12 | 12 | 432 | 16 | 451 | 2.76e-11 | 65.9 |
| Msa0506160 | MtrunA17_Chr1g0161651 | 21.843 | 293 | 166 | 6 | 27 | 267 | 37 | 318 | 2.78e-11 | 64.7 |
| Msa0506160 | MtrunA17_Chr1g0164211 | 28.000 | 200 | 134 | 5 | 254 | 449 | 267 | 460 | 4.90e-11 | 64.7 |
| Msa0506160 | MtrunA17_Chr4g0008101 | 24.314 | 255 | 173 | 7 | 240 | 481 | 279 | 526 | 5.70e-11 | 64.7 |
| Msa0506160 | MtrunA17_Chr6g0451691 | 27.160 | 162 | 109 | 3 | 272 | 428 | 317 | 474 | 6.09e-11 | 64.7 |
| Msa0506160 | MtrunA17_Chr5g0429651 | 21.523 | 302 | 213 | 9 | 157 | 435 | 165 | 465 | 6.61e-11 | 64.3 |
| Msa0506160 | MtrunA17_Chr2g0313761 | 24.506 | 253 | 161 | 8 | 230 | 462 | 258 | 500 | 8.80e-11 | 63.9 |
| Msa0506160 | MtrunA17_Chr2g0313791 | 21.519 | 474 | 316 | 14 | 7 | 440 | 16 | 473 | 9.19e-11 | 63.9 |
| Msa0506160 | MtrunA17_Chr7g0260821 | 22.930 | 471 | 260 | 21 | 22 | 432 | 28 | 455 | 9.81e-11 | 63.9 |
| Msa0506160 | MtrunA17_Chr5g0446161 | 21.018 | 452 | 318 | 14 | 7 | 432 | 11 | 449 | 9.85e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506160 | AT5G36110.1 | 36.638 | 464 | 276 | 8 | 22 | 477 | 23 | 476 | 2.06e-90 | 284 |
| Msa0506160 | AT2G42850.1 | 33.034 | 445 | 290 | 5 | 36 | 479 | 48 | 485 | 2.99e-88 | 278 |
| Msa0506160 | AT4G19230.1 | 33.053 | 475 | 293 | 10 | 4 | 472 | 2 | 457 | 1.52e-75 | 245 |
| Msa0506160 | AT5G45340.1 | 32.623 | 469 | 291 | 10 | 11 | 475 | 13 | 460 | 4.09e-75 | 244 |
| Msa0506160 | AT4G19230.2 | 33.407 | 455 | 278 | 10 | 4 | 452 | 2 | 437 | 4.39e-72 | 236 |
| Msa0506160 | AT5G45340.2 | 33.030 | 439 | 269 | 10 | 11 | 445 | 13 | 430 | 1.15e-69 | 229 |
| Msa0506160 | AT2G29090.2 | 30.549 | 455 | 295 | 6 | 27 | 476 | 43 | 481 | 3.58e-68 | 226 |
| Msa0506160 | AT2G29090.1 | 30.549 | 455 | 295 | 6 | 27 | 476 | 43 | 481 | 3.58e-68 | 226 |
| Msa0506160 | AT3G19270.2 | 29.979 | 467 | 310 | 8 | 5 | 470 | 9 | 459 | 9.68e-67 | 222 |
| Msa0506160 | AT3G19270.1 | 29.864 | 442 | 293 | 8 | 5 | 445 | 9 | 434 | 1.78e-62 | 210 |
| Msa0506160 | AT1G12740.1 | 27.191 | 445 | 313 | 7 | 33 | 474 | 31 | 467 | 1.79e-58 | 200 |
| Msa0506160 | AT5G36110.2 | 34.795 | 365 | 223 | 6 | 22 | 379 | 23 | 379 | 2.70e-57 | 195 |
| Msa0506160 | AT3G13730.1 | 28.908 | 467 | 298 | 10 | 24 | 475 | 42 | 489 | 1.05e-56 | 196 |
| Msa0506160 | AT2G32440.2 | 28.125 | 480 | 327 | 10 | 6 | 474 | 12 | 484 | 6.27e-56 | 194 |
| Msa0506160 | AT2G32440.1 | 28.125 | 480 | 327 | 10 | 6 | 474 | 12 | 484 | 6.27e-56 | 194 |
| Msa0506160 | AT1G12740.4 | 26.829 | 451 | 313 | 8 | 33 | 474 | 31 | 473 | 8.09e-56 | 193 |
| Msa0506160 | AT1G12740.2 | 26.608 | 451 | 314 | 8 | 33 | 474 | 31 | 473 | 1.12e-55 | 193 |
| Msa0506160 | AT4G36380.1 | 27.123 | 424 | 298 | 5 | 33 | 450 | 69 | 487 | 1.62e-55 | 194 |
| Msa0506160 | AT1G05160.2 | 27.354 | 446 | 317 | 6 | 33 | 474 | 45 | 487 | 2.09e-55 | 192 |
| Msa0506160 | AT1G05160.1 | 27.354 | 446 | 317 | 6 | 33 | 474 | 45 | 487 | 2.09e-55 | 192 |
| Msa0506160 | AT3G13730.2 | 29.128 | 436 | 277 | 9 | 24 | 444 | 42 | 460 | 3.09e-55 | 191 |
| Msa0506160 | AT2G29090.3 | 29.219 | 397 | 264 | 5 | 85 | 476 | 2 | 386 | 8.81e-55 | 188 |
| Msa0506160 | AT3G50660.1 | 26.778 | 478 | 309 | 6 | 32 | 474 | 38 | 509 | 2.53e-54 | 190 |
| Msa0506160 | AT1G19630.1 | 26.797 | 459 | 321 | 10 | 8 | 460 | 8 | 457 | 2.79e-54 | 189 |
| Msa0506160 | AT5G05690.1 | 29.009 | 424 | 283 | 8 | 32 | 449 | 30 | 441 | 7.60e-54 | 188 |
| Msa0506160 | AT5G38970.1 | 28.243 | 478 | 316 | 12 | 8 | 476 | 5 | 464 | 6.03e-53 | 185 |
| Msa0506160 | AT1G19630.3 | 27.051 | 451 | 314 | 10 | 8 | 452 | 8 | 449 | 8.68e-53 | 184 |
| Msa0506160 | AT2G42850.2 | 30.725 | 345 | 234 | 4 | 36 | 379 | 48 | 388 | 3.49e-52 | 181 |
| Msa0506160 | AT5G14400.2 | 27.434 | 452 | 278 | 12 | 38 | 476 | 1 | 415 | 9.78e-51 | 178 |
| Msa0506160 | AT5G14400.3 | 28.095 | 420 | 253 | 11 | 38 | 444 | 1 | 384 | 9.21e-50 | 175 |
| Msa0506160 | AT3G30180.1 | 26.611 | 481 | 326 | 11 | 1 | 476 | 6 | 464 | 1.15e-48 | 174 |
| Msa0506160 | AT3G50660.2 | 27.139 | 409 | 268 | 4 | 32 | 415 | 38 | 441 | 3.50e-46 | 167 |
| Msa0506160 | AT5G05690.2 | 28.421 | 380 | 255 | 7 | 32 | 406 | 30 | 397 | 1.12e-45 | 164 |
| Msa0506160 | AT1G19630.2 | 27.228 | 404 | 282 | 9 | 8 | 405 | 8 | 405 | 1.51e-45 | 165 |
| Msa0506160 | AT5G38970.3 | 28.747 | 407 | 265 | 10 | 7 | 404 | 4 | 394 | 1.04e-44 | 162 |
| Msa0506160 | AT5G36140.1 | 32.673 | 303 | 191 | 6 | 17 | 314 | 17 | 311 | 8.43e-44 | 157 |
| Msa0506160 | AT1G55940.2 | 27.253 | 466 | 320 | 13 | 8 | 463 | 22 | 478 | 9.49e-43 | 159 |
| Msa0506160 | AT1G55940.1 | 27.455 | 448 | 307 | 12 | 8 | 445 | 22 | 461 | 9.45e-42 | 155 |
| Msa0506160 | AT1G73340.1 | 25.577 | 477 | 326 | 10 | 13 | 477 | 21 | 480 | 1.59e-41 | 155 |
| Msa0506160 | AT5G36130.1 | 45.390 | 141 | 74 | 2 | 338 | 477 | 1 | 139 | 3.61e-41 | 144 |
| Msa0506160 | AT1G12740.3 | 27.353 | 340 | 239 | 4 | 33 | 370 | 31 | 364 | 1.12e-40 | 150 |
| Msa0506160 | AT5G14400.4 | 28.902 | 346 | 217 | 9 | 38 | 370 | 1 | 330 | 1.88e-40 | 148 |
| Msa0506160 | AT3G44970.1 | 27.069 | 447 | 313 | 7 | 33 | 474 | 35 | 473 | 6.83e-40 | 150 |
| Msa0506160 | AT5G48000.2 | 25.893 | 448 | 317 | 9 | 33 | 474 | 35 | 473 | 1.40e-39 | 149 |
| Msa0506160 | AT5G48000.4 | 25.893 | 448 | 317 | 9 | 33 | 474 | 35 | 473 | 1.40e-39 | 149 |
| Msa0506160 | AT5G48000.7 | 25.893 | 448 | 317 | 9 | 33 | 474 | 35 | 473 | 1.40e-39 | 149 |
| Msa0506160 | AT5G48000.6 | 25.893 | 448 | 317 | 9 | 33 | 474 | 35 | 473 | 1.40e-39 | 149 |
| Msa0506160 | AT5G48000.5 | 25.893 | 448 | 317 | 9 | 33 | 474 | 35 | 473 | 1.40e-39 | 149 |
| Msa0506160 | AT5G48000.3 | 25.893 | 448 | 317 | 9 | 33 | 474 | 35 | 473 | 1.40e-39 | 149 |
| Msa0506160 | AT5G48000.1 | 25.893 | 448 | 317 | 9 | 33 | 474 | 76 | 514 | 1.80e-39 | 150 |
| Msa0506160 | AT5G38970.2 | 26.854 | 391 | 268 | 9 | 91 | 476 | 6 | 383 | 1.15e-37 | 142 |
| Msa0506160 | AT5G38970.4 | 26.854 | 391 | 268 | 9 | 91 | 476 | 6 | 383 | 1.15e-37 | 142 |
| Msa0506160 | AT4G36380.2 | 25.948 | 343 | 244 | 4 | 33 | 370 | 69 | 406 | 9.99e-37 | 140 |
| Msa0506160 | AT1G78490.1 | 27.045 | 440 | 298 | 13 | 33 | 462 | 35 | 461 | 3.20e-36 | 140 |
| Msa0506160 | AT1G65670.1 | 23.356 | 441 | 315 | 6 | 8 | 442 | 10 | 433 | 7.14e-36 | 139 |
| Msa0506160 | AT4G15300.2 | 25.000 | 484 | 331 | 12 | 5 | 474 | 2 | 467 | 1.65e-34 | 135 |
| Msa0506160 | AT4G15300.3 | 24.889 | 450 | 313 | 10 | 33 | 474 | 25 | 457 | 2.40e-34 | 134 |
| Msa0506160 | AT5G14400.1 | 25.693 | 397 | 245 | 12 | 93 | 476 | 2 | 361 | 9.37e-34 | 131 |
| Msa0506160 | AT4G15396.1 | 23.319 | 476 | 329 | 13 | 1 | 461 | 1 | 455 | 1.42e-30 | 124 |
| Msa0506160 | AT4G15393.2 | 23.529 | 459 | 331 | 13 | 8 | 461 | 10 | 453 | 1.54e-30 | 124 |
| Msa0506160 | AT4G15396.3 | 23.195 | 457 | 317 | 11 | 1 | 442 | 1 | 438 | 7.12e-30 | 122 |
| Msa0506160 | AT5G05690.3 | 26.346 | 353 | 238 | 9 | 124 | 466 | 3 | 343 | 2.95e-29 | 118 |
| Msa0506160 | AT1G78490.2 | 26.110 | 383 | 261 | 10 | 33 | 405 | 35 | 405 | 2.46e-27 | 114 |
| Msa0506160 | AT4G15300.1 | 23.124 | 493 | 326 | 13 | 18 | 474 | 4 | 479 | 1.24e-25 | 110 |
| Msa0506160 | AT4G15396.2 | 22.689 | 476 | 311 | 14 | 1 | 461 | 1 | 434 | 4.87e-25 | 107 |
| Msa0506160 | AT2G29090.4 | 26.259 | 278 | 187 | 5 | 27 | 299 | 43 | 307 | 9.03e-25 | 105 |
| Msa0506160 | AT5G04630.1 | 22.857 | 490 | 324 | 17 | 7 | 458 | 12 | 485 | 8.32e-23 | 101 |
| Msa0506160 | AT4G15310.1 | 22.474 | 485 | 338 | 17 | 10 | 474 | 4 | 470 | 2.82e-22 | 99.8 |
| Msa0506160 | AT4G15396.4 | 22.434 | 419 | 292 | 11 | 1 | 405 | 1 | 400 | 6.34e-22 | 98.2 |
| Msa0506160 | AT3G10560.1 | 23.554 | 484 | 319 | 15 | 8 | 455 | 18 | 486 | 1.13e-21 | 98.2 |
| Msa0506160 | AT4G15393.1 | 22.084 | 403 | 297 | 10 | 8 | 406 | 10 | 399 | 1.30e-21 | 97.1 |
| Msa0506160 | AT2G28860.1 | 21.849 | 476 | 329 | 14 | 27 | 477 | 31 | 488 | 2.53e-21 | 97.1 |
| Msa0506160 | AT1G11680.1 | 22.698 | 467 | 320 | 14 | 8 | 454 | 16 | 461 | 4.47e-21 | 96.3 |
| Msa0506160 | AT2G28850.1 | 21.941 | 474 | 327 | 14 | 29 | 477 | 33 | 488 | 2.81e-20 | 94.0 |
| Msa0506160 | AT2G34500.1 | 23.984 | 492 | 329 | 17 | 12 | 477 | 15 | 487 | 3.93e-20 | 93.6 |
| Msa0506160 | AT2G26170.1 | 23.377 | 462 | 287 | 16 | 32 | 445 | 45 | 487 | 7.86e-19 | 89.7 |
| Msa0506160 | AT2G26170.2 | 30.041 | 243 | 144 | 10 | 216 | 445 | 175 | 404 | 2.25e-18 | 87.8 |
| Msa0506160 | AT5G24950.1 | 25.104 | 482 | 304 | 21 | 4 | 449 | 2 | 462 | 3.31e-18 | 87.8 |
| Msa0506160 | AT3G30290.1 | 21.981 | 414 | 290 | 10 | 73 | 474 | 5 | 397 | 6.26e-18 | 86.3 |
| Msa0506160 | AT5G67310.1 | 22.979 | 470 | 292 | 18 | 24 | 453 | 33 | 472 | 7.20e-18 | 86.7 |
| Msa0506160 | AT1G11600.1 | 23.154 | 501 | 311 | 17 | 26 | 473 | 28 | 507 | 7.27e-18 | 86.7 |
| Msa0506160 | AT5G57220.1 | 23.171 | 492 | 311 | 17 | 9 | 462 | 4 | 466 | 4.36e-17 | 84.3 |
| Msa0506160 | AT5G44620.1 | 20.823 | 413 | 288 | 12 | 68 | 449 | 76 | 480 | 8.15e-17 | 83.6 |
| Msa0506160 | AT4G37430.1 | 22.510 | 502 | 301 | 18 | 9 | 456 | 1 | 468 | 1.35e-16 | 82.8 |
| Msa0506160 | AT1G31800.1 | 23.529 | 442 | 284 | 14 | 40 | 444 | 110 | 534 | 1.39e-16 | 82.8 |
| Msa0506160 | AT3G44970.2 | 25.000 | 320 | 232 | 4 | 33 | 349 | 35 | 349 | 1.96e-16 | 81.3 |
| Msa0506160 | AT5G06905.1 | 23.340 | 497 | 309 | 21 | 13 | 458 | 11 | 486 | 4.75e-16 | 81.3 |
| Msa0506160 | AT3G10570.1 | 22.799 | 443 | 277 | 14 | 60 | 458 | 68 | 489 | 6.47e-16 | 80.5 |
| Msa0506160 | AT2G45580.1 | 24.877 | 406 | 260 | 14 | 69 | 441 | 69 | 462 | 8.57e-16 | 80.1 |
| Msa0506160 | AT4G37410.1 | 21.961 | 510 | 335 | 17 | 7 | 478 | 2 | 486 | 1.17e-15 | 79.7 |
| Msa0506160 | AT4G37370.1 | 22.822 | 482 | 312 | 18 | 7 | 455 | 8 | 462 | 1.62e-15 | 79.3 |
| Msa0506160 | AT5G04660.1 | 23.611 | 432 | 288 | 13 | 60 | 458 | 66 | 488 | 2.61e-15 | 78.6 |
| Msa0506160 | AT1G33720.1 | 22.594 | 478 | 321 | 15 | 7 | 449 | 10 | 473 | 3.43e-15 | 78.2 |
| Msa0506160 | AT5G08250.1 | 22.599 | 354 | 244 | 10 | 109 | 432 | 77 | 430 | 5.68e-15 | 77.4 |
| Msa0506160 | AT3G53130.1 | 24.686 | 239 | 159 | 7 | 230 | 459 | 293 | 519 | 7.25e-15 | 77.4 |
| Msa0506160 | AT5G08250.2 | 22.599 | 354 | 244 | 10 | 109 | 432 | 139 | 492 | 8.62e-15 | 77.4 |
| Msa0506160 | AT5G63450.2 | 22.605 | 522 | 337 | 21 | 1 | 477 | 61 | 560 | 1.10e-14 | 77.0 |
| Msa0506160 | AT2G45550.1 | 22.976 | 457 | 303 | 16 | 7 | 428 | 10 | 452 | 1.11e-14 | 76.6 |
| Msa0506160 | AT5G63450.1 | 22.605 | 522 | 337 | 21 | 1 | 477 | 3 | 502 | 1.19e-14 | 76.6 |
| Msa0506160 | AT5G23190.1 | 24.887 | 221 | 153 | 6 | 237 | 444 | 286 | 506 | 1.29e-14 | 76.6 |
| Msa0506160 | AT1G13140.1 | 26.639 | 244 | 160 | 8 | 212 | 438 | 243 | 484 | 1.56e-14 | 76.3 |
| Msa0506160 | AT5G47990.1 | 22.651 | 415 | 280 | 15 | 67 | 449 | 72 | 477 | 1.80e-14 | 76.3 |
| Msa0506160 | AT3G28740.1 | 23.096 | 407 | 262 | 15 | 78 | 452 | 81 | 468 | 2.54e-14 | 75.5 |
| Msa0506160 | AT4G37360.1 | 24.757 | 206 | 145 | 4 | 254 | 457 | 268 | 465 | 2.61e-14 | 75.5 |
| Msa0506160 | AT2G45580.2 | 25.625 | 320 | 201 | 11 | 147 | 441 | 1 | 308 | 2.69e-14 | 74.7 |
| Msa0506160 | AT1G13140.2 | 29.469 | 207 | 129 | 7 | 247 | 438 | 254 | 458 | 3.36e-14 | 75.1 |
| Msa0506160 | AT2G22330.1 | 22.904 | 489 | 320 | 18 | 14 | 458 | 36 | 511 | 5.04e-14 | 74.7 |
| Msa0506160 | AT2G22330.2 | 23.125 | 480 | 312 | 18 | 14 | 449 | 59 | 525 | 5.63e-14 | 74.7 |
| Msa0506160 | AT4G13770.1 | 23.340 | 467 | 295 | 18 | 2 | 428 | 1 | 444 | 9.35e-14 | 73.9 |
| Msa0506160 | AT1G16400.1 | 20.800 | 500 | 312 | 17 | 12 | 449 | 18 | 495 | 1.19e-13 | 73.6 |
| Msa0506160 | AT2G23180.1 | 22.059 | 272 | 185 | 9 | 229 | 480 | 251 | 515 | 1.41e-13 | 73.2 |
| Msa0506160 | AT5G58860.1 | 25.168 | 298 | 201 | 9 | 157 | 432 | 165 | 462 | 1.48e-13 | 73.2 |
| Msa0506160 | AT3G26280.1 | 23.241 | 469 | 309 | 19 | 17 | 450 | 18 | 470 | 2.42e-13 | 72.4 |
| Msa0506160 | AT1G16410.1 | 21.825 | 504 | 316 | 17 | 6 | 449 | 11 | 496 | 3.00e-13 | 72.4 |
| Msa0506160 | AT3G26280.2 | 23.241 | 469 | 309 | 19 | 17 | 450 | 35 | 487 | 3.19e-13 | 72.4 |
| Msa0506160 | AT1G66540.2 | 24.060 | 266 | 186 | 6 | 197 | 457 | 39 | 293 | 3.92e-13 | 70.9 |
| Msa0506160 | AT3G20110.1 | 21.341 | 492 | 304 | 16 | 7 | 450 | 12 | 468 | 4.03e-13 | 72.0 |
| Msa0506160 | AT4G37340.1 | 23.950 | 238 | 167 | 5 | 222 | 457 | 240 | 465 | 6.36e-13 | 71.2 |
| Msa0506160 | AT1G13150.1 | 25.941 | 239 | 162 | 6 | 212 | 435 | 236 | 474 | 7.57e-13 | 71.2 |
| Msa0506160 | AT4G12300.1 | 22.081 | 471 | 323 | 16 | 11 | 449 | 19 | 477 | 8.50e-13 | 70.9 |
| Msa0506160 | AT1G13110.1 | 23.285 | 481 | 316 | 17 | 8 | 449 | 3 | 469 | 8.97e-13 | 70.9 |
| Msa0506160 | AT1G66540.1 | 24.060 | 266 | 186 | 6 | 197 | 457 | 98 | 352 | 9.30e-13 | 70.1 |
| Msa0506160 | AT4G15110.1 | 25.000 | 220 | 118 | 8 | 256 | 440 | 332 | 539 | 1.42e-12 | 70.5 |
| Msa0506160 | AT4G15360.1 | 22.680 | 485 | 329 | 17 | 7 | 457 | 14 | 486 | 1.56e-12 | 70.1 |
| Msa0506160 | AT2G44890.1 | 24.895 | 237 | 163 | 6 | 222 | 443 | 240 | 476 | 2.30e-12 | 69.7 |
| Msa0506160 | AT3G20960.2 | 22.897 | 428 | 283 | 13 | 67 | 457 | 71 | 488 | 2.33e-12 | 69.7 |
| Msa0506160 | AT1G75130.1 | 25.138 | 362 | 240 | 11 | 96 | 440 | 118 | 465 | 2.46e-12 | 69.3 |
| Msa0506160 | AT2G27690.1 | 23.739 | 337 | 230 | 10 | 163 | 477 | 163 | 494 | 4.02e-12 | 68.6 |
| Msa0506160 | AT1G64940.1 | 23.848 | 499 | 320 | 20 | 4 | 457 | 2 | 485 | 5.97e-12 | 68.2 |
| Msa0506160 | AT5G07990.1 | 22.826 | 460 | 300 | 16 | 8 | 428 | 4 | 447 | 6.04e-12 | 68.2 |
| Msa0506160 | AT4G13290.1 | 25.478 | 471 | 274 | 24 | 22 | 449 | 20 | 456 | 1.25e-11 | 67.0 |
| Msa0506160 | AT1G33720.4 | 22.941 | 340 | 229 | 10 | 136 | 449 | 9 | 341 | 1.33e-11 | 66.6 |
| Msa0506160 | AT1G33720.3 | 22.941 | 340 | 229 | 10 | 136 | 449 | 9 | 341 | 1.33e-11 | 66.6 |
| Msa0506160 | AT1G33720.5 | 22.941 | 340 | 229 | 10 | 136 | 449 | 9 | 341 | 1.33e-11 | 66.6 |
| Msa0506160 | AT2G45570.1 | 22.843 | 394 | 261 | 12 | 69 | 428 | 69 | 453 | 1.34e-11 | 67.0 |
| Msa0506160 | AT4G32170.1 | 22.388 | 268 | 180 | 12 | 229 | 479 | 249 | 505 | 3.63e-11 | 65.9 |
| Msa0506160 | AT2G45510.1 | 22.553 | 235 | 167 | 6 | 224 | 443 | 242 | 476 | 4.89e-11 | 65.5 |
| Msa0506160 | AT3G20960.1 | 23.944 | 355 | 227 | 11 | 136 | 457 | 41 | 385 | 4.91e-11 | 65.1 |
| Msa0506160 | AT5G04330.1 | 21.868 | 471 | 309 | 17 | 31 | 459 | 30 | 483 | 7.88e-11 | 64.7 |
| Msa0506160 | AT4G39500.2 | 21.561 | 269 | 181 | 11 | 229 | 478 | 260 | 517 | 8.63e-11 | 64.7 |
| Msa0506160 | AT4G39500.1 | 21.561 | 269 | 181 | 11 | 229 | 478 | 210 | 467 | 9.68e-11 | 64.3 |
Find 108 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTCTTGTTTAGGTATAT+TGG | 0.191911 | 3_4:+52357442 | Msa0506160:intron |
| TTTCTTGTCTTCTTGCAATA+AGG | 0.216651 | 3_4:+52356617 | Msa0506160:CDS |
| CTCCCTTGTTTGGTGGATTT+AGG | 0.221627 | 3_4:+52357289 | Msa0506160:CDS |
| ATTTCCCTGGCACCTCATTT+TGG | 0.224462 | 3_4:+52356488 | Msa0506160:CDS |
| TCTTTGGGGTATCCTATTAT+TGG | 0.246365 | 3_4:+52354627 | Msa0506160:CDS |
| AAATGTTCCTAAAGGGTCTT+TGG | 0.251114 | 3_4:+52354611 | Msa0506160:CDS |
| CAATTCTTGCCCTAGCCTTT+TGG | 0.252995 | 3_4:-52356516 | None:intergenic |
| TCTCTTATATAATTTCTAAA+TGG | 0.264653 | 3_4:+52354500 | None:intergenic |
| CAAACCCTAGCTGAACTTAT+AGG | 0.271100 | 3_4:+52354867 | Msa0506160:CDS |
| TCCCCTACCGTGTTTATTAT+TGG | 0.272745 | 3_4:+52354756 | Msa0506160:CDS |
| CAAGGAAATAAGTTTATTCT+TGG | 0.273367 | 3_4:+52354783 | Msa0506160:CDS |
| CTTCCTTAGGTCTACAAGTT+AGG | 0.275168 | 3_4:+52357718 | Msa0506160:CDS |
| CAAGGATATGACATCCAAAA+AGG | 0.281190 | 3_4:+52357336 | Msa0506160:CDS |
| GTTTCTTGTTTAGGTATATT+GGG | 0.287130 | 3_4:+52357443 | Msa0506160:intron |
| TTCTTGTCTTCTTGCAATAA+GGG | 0.290028 | 3_4:+52356618 | Msa0506160:CDS |
| TCAAGTGTTTCTCCAATAAT+AGG | 0.290870 | 3_4:-52354639 | None:intergenic |
| CCCTTTACTTACCTTCCATT+TGG | 0.313443 | 3_4:+52357558 | Msa0506160:CDS |
| CTCTTATGAGCTTGATGATA+TGG | 0.317159 | 3_4:+52356725 | Msa0506160:CDS |
| AGAGGTTTACAATAAAGTTT+TGG | 0.325165 | 3_4:+52356765 | Msa0506160:CDS |
| AATGTTCCTAAAGGGTCTTT+GGG | 0.354365 | 3_4:+52354612 | Msa0506160:CDS |
| CGAGATGGTTCAAACTTGTA+TGG | 0.363230 | 3_4:-52357507 | None:intergenic |
| GTGCAGGCACAGGTTGGTGA+AGG | 0.369965 | 3_4:+52356219 | Msa0506160:intron |
| GAAGAAACTGTCCTATGATA+TGG | 0.372769 | 3_4:+52356369 | Msa0506160:CDS |
| TTGATATATACAATTTATAC+AGG | 0.383623 | 3_4:-52357857 | None:intergenic |
| TTAGTTTGCTTTAATGTACT+TGG | 0.387012 | 3_4:-52357799 | None:intergenic |
| CTTCCTTTATGTAGAACAAA+TGG | 0.398316 | 3_4:+52357161 | Msa0506160:intron |
| AGGATGATCCCTCCCTTGTT+TGG | 0.399326 | 3_4:+52357279 | Msa0506160:CDS |
| TGTAGACCTAAGGAAGGATA+TGG | 0.415745 | 3_4:-52357711 | None:intergenic |
| ACTTACCTTCCATTTGGTGC+AGG | 0.421884 | 3_4:+52357564 | Msa0506160:CDS |
| GAAGAAAGGGTATCTAAATA+TGG | 0.423206 | 3_4:+52354705 | Msa0506160:CDS |
| TAAGAAGATATATTACATCT+TGG | 0.430086 | 3_4:-52357747 | None:intergenic |
| ATGATCCCTCCCTTGTTTGG+TGG | 0.435807 | 3_4:+52357282 | Msa0506160:CDS |
| GGATACCCCAAAGACCCTTT+AGG | 0.439674 | 3_4:-52354618 | None:intergenic |
| AGAAGGGAGGATTTATCAAA+AGG | 0.441561 | 3_4:+52356568 | Msa0506160:CDS |
| GCATAGGAAATGAGTTTGCC+AGG | 0.442163 | 3_4:+52357598 | Msa0506160:CDS |
| CCTACCATTCAAAAGATACT+TGG | 0.452384 | 3_4:+52354840 | Msa0506160:CDS |
| TGACGAGTAATAGTTTCCTC+TGG | 0.457822 | 3_4:-52357681 | None:intergenic |
| TTCCTATTATGAATAAAAGA+AGG | 0.465607 | 3_4:+52356551 | Msa0506160:CDS |
| CCTATGCCATATCCTTCCTT+AGG | 0.469443 | 3_4:+52357705 | Msa0506160:CDS |
| TAAAGCACAAAGGCAAGATA+AGG | 0.473516 | 3_4:+52354668 | Msa0506160:CDS |
| CACGGTAGGGGAACCCAGTA+AGG | 0.479367 | 3_4:-52354745 | None:intergenic |
| AGGTAAGTAAAGGGAGGGAT+TGG | 0.481178 | 3_4:-52357549 | None:intergenic |
| TTATGACGCCCTGCACCAAA+TGG | 0.483160 | 3_4:-52357573 | None:intergenic |
| TTTGGAGAGGCCAAAAGGCT+AGG | 0.490275 | 3_4:+52356506 | Msa0506160:CDS |
| GAGGTGCCAGGGAAATTGAT+TGG | 0.495782 | 3_4:-52356481 | None:intergenic |
| CCTCTCCAAAATGAGGTGCC+AGG | 0.496307 | 3_4:-52356493 | None:intergenic |
| GCATATCATTAGTAGAGCTT+AGG | 0.499290 | 3_4:-52356594 | None:intergenic |
| AAAGCACAAAGGCAAGATAA+GGG | 0.503390 | 3_4:+52354669 | Msa0506160:CDS |
| TTGATCCTATAAGTTCAGCT+AGG | 0.507385 | 3_4:-52354872 | None:intergenic |
| CTTACCTTCCATTTGGTGCA+GGG | 0.508918 | 3_4:+52357565 | Msa0506160:CDS |
| AATCCTAACTTGTAGACCTA+AGG | 0.510863 | 3_4:-52357721 | None:intergenic |
| CAGGCACAGGTTGGTGAAGG+GGG | 0.515122 | 3_4:+52356222 | Msa0506160:intron |
| TTGAATGAGAATAAAACCAT+TGG | 0.515184 | 3_4:+52356331 | Msa0506160:CDS |
| GTCCAATAATAAACACGGTA+GGG | 0.516663 | 3_4:-52354758 | None:intergenic |
| GCTCTGAGTGGATAGAAGAA+AGG | 0.519240 | 3_4:+52354691 | Msa0506160:CDS |
| TTGGAGAGGCCAAAAGGCTA+GGG | 0.519737 | 3_4:+52356507 | Msa0506160:CDS |
| CTCTGAGTGGATAGAAGAAA+GGG | 0.520937 | 3_4:+52354692 | Msa0506160:CDS |
| TTTCCTAAATCCACCAAACA+AGG | 0.523989 | 3_4:-52357292 | None:intergenic |
| TACATTGGAAGCCATATCAT+AGG | 0.524278 | 3_4:-52356380 | None:intergenic |
| CATGTTCACAAAATTGTGAA+TGG | 0.527167 | 3_4:-52357637 | None:intergenic |
| GAAATGAAGAAAGGCTAACA+TGG | 0.532003 | 3_4:+52357205 | Msa0506160:CDS |
| TGTACTTGGATAAATAATAC+AGG | 0.532307 | 3_4:-52357785 | None:intergenic |
| AGTAAAGGGAGGGATTGGCT+TGG | 0.532885 | 3_4:-52357544 | None:intergenic |
| TAGCTGAACTTATAGGATCA+AGG | 0.533992 | 3_4:+52354874 | Msa0506160:CDS |
| GCAGGCACAGGTTGGTGAAG+GGG | 0.535710 | 3_4:+52356221 | Msa0506160:intron |
| TCTCTTCCAATCAATTTCCC+TGG | 0.538523 | 3_4:+52356475 | Msa0506160:CDS |
| ACCAAATGGAAGGTAAGTAA+AGG | 0.538973 | 3_4:-52357559 | None:intergenic |
| CCAAATGGAAGGTAAGTAAA+GGG | 0.540818 | 3_4:-52357558 | None:intergenic |
| AAAGGAAAGGAAATGAAGAA+AGG | 0.542688 | 3_4:+52357196 | Msa0506160:CDS |
| ATCTATGTCAAACAATACAT+TGG | 0.547338 | 3_4:-52356395 | None:intergenic |
| TCCTATTATGAATAAAAGAA+GGG | 0.547974 | 3_4:+52356552 | Msa0506160:CDS |
| CTCTCCAAAATGAGGTGCCA+GGG | 0.550512 | 3_4:-52356492 | None:intergenic |
| TGATCCTATAAGTTCAGCTA+GGG | 0.551541 | 3_4:-52354871 | None:intergenic |
| TGCAGGCACAGGTTGGTGAA+GGG | 0.555179 | 3_4:+52356220 | Msa0506160:intron |
| CATCAACCTCACAACTCCAA+TGG | 0.561024 | 3_4:-52356347 | None:intergenic |
| GAAGTTATCAAGAGATCAAG+AGG | 0.566790 | 3_4:+52356747 | Msa0506160:CDS |
| TAGGTATATTGGGCATCAAG+TGG | 0.569167 | 3_4:+52357453 | Msa0506160:intron |
| TCCAATAATAAACACGGTAG+GGG | 0.569485 | 3_4:-52354757 | None:intergenic |
| AGTACACATAATACAATGAA+AGG | 0.569550 | 3_4:-52354534 | None:intergenic |
| CTAACTTGTAGACCTAAGGA+AGG | 0.588301 | 3_4:-52357717 | None:intergenic |
| CCTAAGGAAGGATATGGCAT+AGG | 0.589890 | 3_4:-52357705 | None:intergenic |
| TGTCCAATAATAAACACGGT+AGG | 0.597955 | 3_4:-52354759 | None:intergenic |
| GCAGGGCGTCATAATTGCAT+AGG | 0.600011 | 3_4:+52357582 | Msa0506160:CDS |
| GACGCCCTGCACCAAATGGA+AGG | 0.600357 | 3_4:-52357569 | None:intergenic |
| TAAATCCACCAAACAAGGGA+GGG | 0.610091 | 3_4:-52357287 | None:intergenic |
| CATAGGAAATGAGTTTGCCA+GGG | 0.611766 | 3_4:+52357599 | Msa0506160:CDS |
| CTTAAAGATACTAGCTACCA+AGG | 0.614804 | 3_4:+52357318 | Msa0506160:CDS |
| AAATGAAGAAAGGCTAACAT+GGG | 0.624787 | 3_4:+52357206 | Msa0506160:CDS |
| ATAAAACCATTGGAGTTGTG+AGG | 0.625603 | 3_4:+52356341 | Msa0506160:CDS |
| GTAATTATGTCATCAGCTAG+AGG | 0.627210 | 3_4:-52356655 | None:intergenic |
| ATGGAAGGTAAGTAAAGGGA+GGG | 0.627514 | 3_4:-52357554 | None:intergenic |
| ATGTTCCTAAAGGGTCTTTG+GGG | 0.629534 | 3_4:+52354613 | Msa0506160:CDS |
| GTGTTTATTATTGGACAACA+AGG | 0.634415 | 3_4:+52354765 | Msa0506160:CDS |
| TGCAGACAAAACATCATCTG+AGG | 0.635957 | 3_4:-52354808 | None:intergenic |
| TATTATGAATAAAAGAAGGG+AGG | 0.641657 | 3_4:+52356555 | Msa0506160:CDS |
| GGTAGTTAATGTCTCAACCC+TGG | 0.644929 | 3_4:-52357616 | None:intergenic |
| TACAAAAGATGAAATACACA+TGG | 0.649342 | 3_4:+52357235 | Msa0506160:CDS |
| TTCCTAAATCCACCAAACAA+GGG | 0.651412 | 3_4:-52357291 | None:intergenic |
| CTAAATCCACCAAACAAGGG+AGG | 0.656656 | 3_4:-52357288 | None:intergenic |
| TTGACATAGATGATCACACA+AGG | 0.668771 | 3_4:+52356407 | Msa0506160:CDS |
| ATGGTCTCAATTGAATCCAG+AGG | 0.672228 | 3_4:+52357665 | Msa0506160:CDS |
| AATGGAAGGTAAGTAAAGGG+AGG | 0.673968 | 3_4:-52357555 | None:intergenic |
| TTGTTGTCCAATAATAAACA+CGG | 0.685178 | 3_4:-52354763 | None:intergenic |
| GGTAGGGGAACCCAGTAAGG+AGG | 0.689943 | 3_4:-52354742 | None:intergenic |
| GGCAAGATAAGGGCTCTGAG+TGG | 0.693628 | 3_4:+52354679 | Msa0506160:CDS |
| GAGTTGCTCAAGAATTGATG+AGG | 0.701801 | 3_4:+52357259 | Msa0506160:CDS |
| AATGAAGAAAGGCTAACATG+GGG | 0.726923 | 3_4:+52357207 | Msa0506160:CDS |
| TGACATAGATGATCACACAA+GGG | 0.752127 | 3_4:+52356408 | Msa0506160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTATTATATTTATGATT+TGG | + | chr3_4:52355293-52355312 | Msa0506160:intron | 10.0% |
| !! | TTGTATTATATTTATGATTT+GGG | + | chr3_4:52355294-52355313 | Msa0506160:intron | 10.0% |
| !!! | ATAAACTTTTATTAAAATCA+AGG | + | chr3_4:52355924-52355943 | Msa0506160:intron | 10.0% |
| !!! | TTTTATATTATGCAAAATTT+TGG | - | chr3_4:52356028-52356047 | None:intergenic | 10.0% |
| !!! | AAAATTTTGCATAATATAAA+AGG | + | chr3_4:52356027-52356046 | Msa0506160:intron | 10.0% |
| !! | TATTAAAAAACTATAACAAA+CGG | - | chr3_4:52356918-52356937 | None:intergenic | 10.0% |
| !! | ATAATACAAAATTAAAACTA+TGG | - | chr3_4:52357381-52357400 | None:intergenic | 10.0% |
| !!! | AGTTTTGTTTTATATTAGTT+AGG | + | chr3_4:52355490-52355509 | Msa0506160:intron | 15.0% |
| !! | TAAATTTGTGTGTTAAAAAT+AGG | - | chr3_4:52355558-52355577 | None:intergenic | 15.0% |
| !! | GAAAAAGTGATATTTAAAAA+AGG | + | chr3_4:52356156-52356175 | Msa0506160:intron | 15.0% |
| !!! | TTTTAATAATCTATAGCAAA+TGG | + | chr3_4:52357108-52357127 | Msa0506160:intron | 15.0% |
| !! | TTGATATATACAATTTATAC+AGG | - | chr3_4:52357860-52357879 | None:intergenic | 15.0% |
| !!! | TTTTTGAGAGAATTTTTTTG+AGG | - | chr3_4:52354581-52354600 | None:intergenic | 20.0% |
| !! | AAACAAAAAATGTTCCTAAA+GGG | + | chr3_4:52354604-52354623 | Msa0506160:CDS | 20.0% |
| !!! | AAAGAGAAATCGTATTTTTT+AGG | + | chr3_4:52354968-52354987 | Msa0506160:intron | 20.0% |
| !!! | AAGAGAAATCGTATTTTTTA+GGG | + | chr3_4:52354969-52354988 | Msa0506160:intron | 20.0% |
| !! | TAGAATTTCAAAATTCTGAT+CGG | - | chr3_4:52355093-52355112 | None:intergenic | 20.0% |
| !!! | GCAATTTTCTTACTTATAAT+TGG | + | chr3_4:52355211-52355230 | Msa0506160:intron | 20.0% |
| !!! | TCTAGATTTTAAGTATTTTG+TGG | + | chr3_4:52355265-52355284 | Msa0506160:intron | 20.0% |
| !! | TTTAACACAATTTAAACATG+TGG | + | chr3_4:52355605-52355624 | Msa0506160:intron | 20.0% |
| !! | TAGTAGAAGATTAATGAATA+TGG | + | chr3_4:52355639-52355658 | Msa0506160:intron | 20.0% |
| !! | TAAAATTGTGTTATAGTGAA+TGG | + | chr3_4:52355784-52355803 | Msa0506160:intron | 20.0% |
| !! | TTTAATCAAGATCATAATCA+AGG | - | chr3_4:52356090-52356109 | None:intergenic | 20.0% |
| !! | TTCCTATTATGAATAAAAGA+AGG | + | chr3_4:52356551-52356570 | Msa0506160:CDS | 20.0% |
| !! | TCCTATTATGAATAAAAGAA+GGG | + | chr3_4:52356552-52356571 | Msa0506160:CDS | 20.0% |
| !! | TTCTATATTCCAGAATAAAA+AGG | + | chr3_4:52356833-52356852 | Msa0506160:intron | 20.0% |
| !! | TCTATATTCCAGAATAAAAA+GGG | + | chr3_4:52356834-52356853 | Msa0506160:intron | 20.0% |
| !!! | AAATGGAAATTTTAAAGCAA+AGG | + | chr3_4:52357178-52357197 | Msa0506160:CDS | 20.0% |
| !!! | TTTAATATGGTTTCTTGTTT+AGG | + | chr3_4:52357434-52357453 | Msa0506160:intron | 20.0% |
| !! | TAAGAAGATATATTACATCT+TGG | - | chr3_4:52357750-52357769 | None:intergenic | 20.0% |
| ! | AGTACACATAATACAATGAA+AGG | - | chr3_4:52354537-52354556 | None:intergenic | 25.0% |
| ! | CAAACAAAAAATGTTCCTAA+AGG | + | chr3_4:52354603-52354622 | Msa0506160:CDS | 25.0% |
| !! | TTGATTTTCTTAAAGCACAA+AGG | + | chr3_4:52354658-52354677 | Msa0506160:CDS | 25.0% |
| ! | TTGTTGTCCAATAATAAACA+CGG | - | chr3_4:52354766-52354785 | None:intergenic | 25.0% |
| ! | CAAGGAAATAAGTTTATTCT+TGG | + | chr3_4:52354783-52354802 | Msa0506160:CDS | 25.0% |
| ! | GAAACTTCAAATAGTTTAGA+TGG | + | chr3_4:52354938-52354957 | Msa0506160:intron | 25.0% |
| !!! | AGAGAAATCGTATTTTTTAG+GGG | + | chr3_4:52354970-52354989 | Msa0506160:intron | 25.0% |
| ! | AGAATTTCAAAATTCTGATC+GGG | - | chr3_4:52355092-52355111 | None:intergenic | 25.0% |
| !! | AAACGAATTTTGTGTAGTTT+AGG | - | chr3_4:52355165-52355184 | None:intergenic | 25.0% |
| ! | ATATTCCACATCAATTTAGA+TGG | - | chr3_4:52355868-52355887 | None:intergenic | 25.0% |
| ! | TTATGATCTTGATTAAACAG+TGG | + | chr3_4:52356093-52356112 | Msa0506160:intron | 25.0% |
| !!! | TCTTTTTCACATAGTTTTGA+AGG | - | chr3_4:52356276-52356295 | None:intergenic | 25.0% |
| ! | TCAAAACTATGTGAAAAAGA+TGG | + | chr3_4:52356276-52356295 | Msa0506160:CDS | 25.0% |
| ! | TTGAATGAGAATAAAACCAT+TGG | + | chr3_4:52356331-52356350 | Msa0506160:CDS | 25.0% |
| ! | ATCTATGTCAAACAATACAT+TGG | - | chr3_4:52356398-52356417 | None:intergenic | 25.0% |
| !! | TCCCTTCTTTTATTCATAAT+AGG | - | chr3_4:52356556-52356575 | None:intergenic | 25.0% |
| ! | TATTATGAATAAAAGAAGGG+AGG | + | chr3_4:52356555-52356574 | Msa0506160:CDS | 25.0% |
| !! | AGAGGTTTACAATAAAGTTT+TGG | + | chr3_4:52356765-52356784 | Msa0506160:CDS | 25.0% |
| !!! | GTTTACAATAAAGTTTTGGA+AGG | + | chr3_4:52356769-52356788 | Msa0506160:CDS | 25.0% |
| !! | AAACAAAACCCTTTTTATTC+TGG | - | chr3_4:52356845-52356864 | None:intergenic | 25.0% |
| ! | ACACTAAAAGAAATCACTTA+AGG | + | chr3_4:52356882-52356901 | Msa0506160:intron | 25.0% |
| ! | AAAAAACTATAACAAACGGA+TGG | - | chr3_4:52356914-52356933 | None:intergenic | 25.0% |
| ! | TTTCCATTTGTTCTACATAA+AGG | - | chr3_4:52357167-52357186 | None:intergenic | 25.0% |
| !!! | GAAATTTTAAAGCAAAGGAA+AGG | + | chr3_4:52357183-52357202 | Msa0506160:CDS | 25.0% |
| ! | TACAAAAGATGAAATACACA+TGG | + | chr3_4:52357235-52357254 | Msa0506160:CDS | 25.0% |
| !! | GTTTCTTGTTTAGGTATATT+GGG | + | chr3_4:52357443-52357462 | Msa0506160:intron | 25.0% |
| ! | TGTACTTGGATAAATAATAC+AGG | - | chr3_4:52357788-52357807 | None:intergenic | 25.0% |
| !!! | TTAGTTTGCTTTAATGTACT+TGG | - | chr3_4:52357802-52357821 | None:intergenic | 25.0% |
| TCAAGTGTTTCTCCAATAAT+AGG | - | chr3_4:52354642-52354661 | None:intergenic | 30.0% | |
| !! | GAAGAAAGGGTATCTAAATA+TGG | + | chr3_4:52354705-52354724 | Msa0506160:CDS | 30.0% |
| GTGTTTATTATTGGACAACA+AGG | + | chr3_4:52354765-52354784 | Msa0506160:CDS | 30.0% | |
| ! | AAGTATCTTTTGAATGGTAG+GGG | - | chr3_4:52354841-52354860 | None:intergenic | 30.0% |
| ! | CAAGTATCTTTTGAATGGTA+GGG | - | chr3_4:52354842-52354861 | None:intergenic | 30.0% |
| ! | CTTTCCAAGTATCTTTTGAA+TGG | - | chr3_4:52354847-52354866 | None:intergenic | 30.0% |
| AATAGCATGTATGAAACTGT+GGG | - | chr3_4:52355004-52355023 | None:intergenic | 30.0% | |
| TTTCATACATGCTATTCAAC+TGG | + | chr3_4:52355008-52355027 | Msa0506160:intron | 30.0% | |
| ! | TCGAATGACTTTTCATTACA+CGG | + | chr3_4:52355035-52355054 | Msa0506160:intron | 30.0% |
| !!! | TTATTTTAAGATGCGAGACT+TGG | + | chr3_4:52355329-52355348 | Msa0506160:intron | 30.0% |
| ! | CAAACTTTAACCTTCGATTT+TGG | + | chr3_4:52355377-52355396 | Msa0506160:intron | 30.0% |
| GTAGATAACTGTATCAAGAA+AGG | - | chr3_4:52355470-52355489 | None:intergenic | 30.0% | |
| GTATATTTCAACTCAAGTAG+TGG | + | chr3_4:52355709-52355728 | Msa0506160:intron | 30.0% | |
| TGAGTGAGTATAATGTATAG+TGG | + | chr3_4:52355732-52355751 | Msa0506160:intron | 30.0% | |
| ! | TATAGTGGAATATTTGCTAG+TGG | + | chr3_4:52355747-52355766 | Msa0506160:intron | 30.0% |
| TGGTTAATTACGCTCAATAA+AGG | - | chr3_4:52355826-52355845 | None:intergenic | 30.0% | |
| !! | TTGAGGCTTGTGTTTATTTT+TGG | + | chr3_4:52356197-52356216 | Msa0506160:intron | 30.0% |
| TTTCTTGTCTTCTTGCAATA+AGG | + | chr3_4:52356617-52356636 | Msa0506160:CDS | 30.0% | |
| TTCTTGTCTTCTTGCAATAA+GGG | + | chr3_4:52356618-52356637 | Msa0506160:CDS | 30.0% | |
| AATAGCATAGTCTAAGCAAA+AGG | - | chr3_4:52356804-52356823 | None:intergenic | 30.0% | |
| AATAAAAGCTATTGTGTCTG+TGG | - | chr3_4:52357045-52357064 | None:intergenic | 30.0% | |
| AAACTTCAAAGAGAGACTAA+GGG | - | chr3_4:52357135-52357154 | None:intergenic | 30.0% | |
| AAAACTTCAAAGAGAGACTA+AGG | - | chr3_4:52357136-52357155 | None:intergenic | 30.0% | |
| CTTCCTTTATGTAGAACAAA+TGG | + | chr3_4:52357161-52357180 | Msa0506160:intron | 30.0% | |
| AAAGGAAAGGAAATGAAGAA+AGG | + | chr3_4:52357196-52357215 | Msa0506160:CDS | 30.0% | |
| AAATGAAGAAAGGCTAACAT+GGG | + | chr3_4:52357206-52357225 | Msa0506160:CDS | 30.0% | |
| AAGGATATGACATCCAAAAA+GGG | + | chr3_4:52357337-52357356 | Msa0506160:CDS | 30.0% | |
| ! | GGTTTCTTGTTTAGGTATAT+TGG | + | chr3_4:52357442-52357461 | Msa0506160:intron | 30.0% |
| !! | GTTTGATTTTCAAAACGAGA+TGG | - | chr3_4:52357525-52357544 | None:intergenic | 30.0% |
| CATGTTCACAAAATTGTGAA+TGG | - | chr3_4:52357640-52357659 | None:intergenic | 30.0% | |
| ! | ATTTTGTGAACATGTGTGAA+TGG | + | chr3_4:52357646-52357665 | Msa0506160:CDS | 30.0% |
| AAATGTTCCTAAAGGGTCTT+TGG | + | chr3_4:52354611-52354630 | Msa0506160:CDS | 35.0% | |
| AATGTTCCTAAAGGGTCTTT+GGG | + | chr3_4:52354612-52354631 | Msa0506160:CDS | 35.0% | |
| !! | TCTTTGGGGTATCCTATTAT+TGG | + | chr3_4:52354627-52354646 | Msa0506160:CDS | 35.0% |
| TAAAGCACAAAGGCAAGATA+AGG | + | chr3_4:52354668-52354687 | Msa0506160:CDS | 35.0% | |
| AAAGCACAAAGGCAAGATAA+GGG | + | chr3_4:52354669-52354688 | Msa0506160:CDS | 35.0% | |
| !!! | AGTAAGGAGGTTTTGAAAAC+AGG | - | chr3_4:52354732-52354751 | None:intergenic | 35.0% |
| ! | TGTTTTCAAAACCTCCTTAC+TGG | + | chr3_4:52354731-52354750 | Msa0506160:CDS | 35.0% |
| ! | GTTTTCAAAACCTCCTTACT+GGG | + | chr3_4:52354732-52354751 | Msa0506160:CDS | 35.0% |
| TCCAATAATAAACACGGTAG+GGG | - | chr3_4:52354760-52354779 | None:intergenic | 35.0% | |
| GTCCAATAATAAACACGGTA+GGG | - | chr3_4:52354761-52354780 | None:intergenic | 35.0% | |
| TGTCCAATAATAAACACGGT+AGG | - | chr3_4:52354762-52354781 | None:intergenic | 35.0% | |
| ! | AGTATCTTTTGAATGGTAGG+GGG | - | chr3_4:52354840-52354859 | None:intergenic | 35.0% |
| ! | CCAAGTATCTTTTGAATGGT+AGG | - | chr3_4:52354843-52354862 | None:intergenic | 35.0% |
| CCTACCATTCAAAAGATACT+TGG | + | chr3_4:52354840-52354859 | Msa0506160:CDS | 35.0% | |
| TGATCCTATAAGTTCAGCTA+GGG | - | chr3_4:52354874-52354893 | None:intergenic | 35.0% | |
| TTGATCCTATAAGTTCAGCT+AGG | - | chr3_4:52354875-52354894 | None:intergenic | 35.0% | |
| TAGCTGAACTTATAGGATCA+AGG | + | chr3_4:52354874-52354893 | Msa0506160:CDS | 35.0% | |
| GAATAGCATGTATGAAACTG+TGG | - | chr3_4:52355005-52355024 | None:intergenic | 35.0% | |
| ATTCTACTCAGGATTCAGAT+CGG | - | chr3_4:52355142-52355161 | None:intergenic | 35.0% | |
| ! | TGTAGTTTAGGATTCTACTC+AGG | - | chr3_4:52355153-52355172 | None:intergenic | 35.0% |
| AAAATCGCAACCAAAATCGA+AGG | - | chr3_4:52355390-52355409 | None:intergenic | 35.0% | |
| !!! | TCGATTTTGGTTGCGATTTT+AGG | + | chr3_4:52355390-52355409 | Msa0506160:intron | 35.0% |
| ! | ATTTGACTTCAGAGCAAAAG+AGG | - | chr3_4:52355433-52355452 | None:intergenic | 35.0% |
| GTTAGCACAATTCAAATTCG+TGG | - | chr3_4:52355846-52355865 | None:intergenic | 35.0% | |
| GCTAACCATCTAAATTGATG+TGG | + | chr3_4:52355860-52355879 | Msa0506160:intron | 35.0% | |
| ! | TGATGAATCCATCTAGTTTG+AGG | + | chr3_4:52356180-52356199 | Msa0506160:intron | 35.0% |
| !!! | CTTGTGTTTATTTTTGGTGC+AGG | + | chr3_4:52356203-52356222 | Msa0506160:intron | 35.0% |
| !!! | ACATAGTTTTGAAGGCATTC+AGG | - | chr3_4:52356268-52356287 | None:intergenic | 35.0% |
| ATAAAACCATTGGAGTTGTG+AGG | + | chr3_4:52356341-52356360 | Msa0506160:CDS | 35.0% | |
| GAAGAAACTGTCCTATGATA+TGG | + | chr3_4:52356369-52356388 | Msa0506160:CDS | 35.0% | |
| TACATTGGAAGCCATATCAT+AGG | - | chr3_4:52356383-52356402 | None:intergenic | 35.0% | |
| TTGACATAGATGATCACACA+AGG | + | chr3_4:52356407-52356426 | Msa0506160:CDS | 35.0% | |
| TGACATAGATGATCACACAA+GGG | + | chr3_4:52356408-52356427 | Msa0506160:CDS | 35.0% | |
| AGAAGGGAGGATTTATCAAA+AGG | + | chr3_4:52356568-52356587 | Msa0506160:CDS | 35.0% | |
| GCATATCATTAGTAGAGCTT+AGG | - | chr3_4:52356597-52356616 | None:intergenic | 35.0% | |
| GTAATTATGTCATCAGCTAG+AGG | - | chr3_4:52356658-52356677 | None:intergenic | 35.0% | |
| ! | CTCTTATGAGCTTGATGATA+TGG | + | chr3_4:52356725-52356744 | Msa0506160:CDS | 35.0% |
| GAAGTTATCAAGAGATCAAG+AGG | + | chr3_4:52356747-52356766 | Msa0506160:CDS | 35.0% | |
| GAAATGAAGAAAGGCTAACA+TGG | + | chr3_4:52357205-52357224 | Msa0506160:CDS | 35.0% | |
| AATGAAGAAAGGCTAACATG+GGG | + | chr3_4:52357207-52357226 | Msa0506160:CDS | 35.0% | |
| TTCCTAAATCCACCAAACAA+GGG | - | chr3_4:52357294-52357313 | None:intergenic | 35.0% | |
| TTTCCTAAATCCACCAAACA+AGG | - | chr3_4:52357295-52357314 | None:intergenic | 35.0% | |
| CTTAAAGATACTAGCTACCA+AGG | + | chr3_4:52357318-52357337 | Msa0506160:CDS | 35.0% | |
| ! | CTTTTTGGATGTCATATCCT+TGG | - | chr3_4:52357338-52357357 | None:intergenic | 35.0% |
| CAAGGATATGACATCCAAAA+AGG | + | chr3_4:52357336-52357355 | Msa0506160:CDS | 35.0% | |
| CCAAATGGAAGGTAAGTAAA+GGG | - | chr3_4:52357561-52357580 | None:intergenic | 35.0% | |
| ACCAAATGGAAGGTAAGTAA+AGG | - | chr3_4:52357562-52357581 | None:intergenic | 35.0% | |
| ! | AATCCTAACTTGTAGACCTA+AGG | - | chr3_4:52357724-52357743 | None:intergenic | 35.0% |
| ATGTTCCTAAAGGGTCTTTG+GGG | + | chr3_4:52354613-52354632 | Msa0506160:CDS | 40.0% | |
| CTCTGAGTGGATAGAAGAAA+GGG | + | chr3_4:52354692-52354711 | Msa0506160:CDS | 40.0% | |
| TCCCCTACCGTGTTTATTAT+TGG | + | chr3_4:52354756-52354775 | Msa0506160:CDS | 40.0% | |
| TGCAGACAAAACATCATCTG+AGG | - | chr3_4:52354811-52354830 | None:intergenic | 40.0% | |
| CAAACCCTAGCTGAACTTAT+AGG | + | chr3_4:52354867-52354886 | Msa0506160:CDS | 40.0% | |
| CTCTTGCATGATCCAAATTG+TGG | + | chr3_4:52355957-52355976 | Msa0506160:intron | 40.0% | |
| TTGATGTTGCTGCCACAATT+TGG | - | chr3_4:52355972-52355991 | None:intergenic | 40.0% | |
| AACACAAGCCTCAAACTAGA+TGG | - | chr3_4:52356191-52356210 | None:intergenic | 40.0% | |
| !!! | TTTATTTTTGGTGCAGGCAC+AGG | + | chr3_4:52356209-52356228 | Msa0506160:intron | 40.0% |
| TCTCTTCCAATCAATTTCCC+TGG | + | chr3_4:52356475-52356494 | Msa0506160:CDS | 40.0% | |
| GAGTTGCTCAAGAATTGATG+AGG | + | chr3_4:52357259-52357278 | Msa0506160:CDS | 40.0% | |
| TAAATCCACCAAACAAGGGA+GGG | - | chr3_4:52357290-52357309 | None:intergenic | 40.0% | |
| GATATGACATCCAAAAAGGG+TGG | + | chr3_4:52357340-52357359 | Msa0506160:CDS | 40.0% | |
| TAGGTATATTGGGCATCAAG+TGG | + | chr3_4:52357453-52357472 | Msa0506160:intron | 40.0% | |
| CGAGATGGTTCAAACTTGTA+TGG | - | chr3_4:52357510-52357529 | None:intergenic | 40.0% | |
| ATGGAAGGTAAGTAAAGGGA+GGG | - | chr3_4:52357557-52357576 | None:intergenic | 40.0% | |
| AATGGAAGGTAAGTAAAGGG+AGG | - | chr3_4:52357558-52357577 | None:intergenic | 40.0% | |
| CCCTTTACTTACCTTCCATT+TGG | + | chr3_4:52357558-52357577 | Msa0506160:CDS | 40.0% | |
| CATAGGAAATGAGTTTGCCA+GGG | + | chr3_4:52357599-52357618 | Msa0506160:CDS | 40.0% | |
| ATGGTCTCAATTGAATCCAG+AGG | + | chr3_4:52357665-52357684 | Msa0506160:CDS | 40.0% | |
| TGACGAGTAATAGTTTCCTC+TGG | - | chr3_4:52357684-52357703 | None:intergenic | 40.0% | |
| TGTAGACCTAAGGAAGGATA+TGG | - | chr3_4:52357714-52357733 | None:intergenic | 40.0% | |
| ! | CTAACTTGTAGACCTAAGGA+AGG | - | chr3_4:52357720-52357739 | None:intergenic | 40.0% |
| CTTCCTTAGGTCTACAAGTT+AGG | + | chr3_4:52357718-52357737 | Msa0506160:CDS | 40.0% | |
| ! | GCTCTGAGTGGATAGAAGAA+AGG | + | chr3_4:52354691-52354710 | Msa0506160:CDS | 45.0% |
| ACTCAGGATTCAGATCGGTA+AGG | - | chr3_4:52355137-52355156 | None:intergenic | 45.0% | |
| AACAGTGGCGCTGTGAAATA+AGG | + | chr3_4:52356108-52356127 | Msa0506160:intron | 45.0% | |
| CATCAACCTCACAACTCCAA+TGG | - | chr3_4:52356350-52356369 | None:intergenic | 45.0% | |
| ! | ATTTCCCTGGCACCTCATTT+TGG | + | chr3_4:52356488-52356507 | Msa0506160:CDS | 45.0% |
| ! | CTTTTGGCCTCTCCAAAATG+AGG | - | chr3_4:52356503-52356522 | None:intergenic | 45.0% |
| !! | CTCATTTTGGAGAGGCCAAA+AGG | + | chr3_4:52356501-52356520 | Msa0506160:CDS | 45.0% |
| !! | CAATTCTTGCCCTAGCCTTT+TGG | - | chr3_4:52356519-52356538 | None:intergenic | 45.0% |
| CTAAATCCACCAAACAAGGG+AGG | - | chr3_4:52357291-52357310 | None:intergenic | 45.0% | |
| !! | CTCCCTTGTTTGGTGGATTT+AGG | + | chr3_4:52357289-52357308 | Msa0506160:CDS | 45.0% |
| ! | ATATCACCTGCCACCCTTTT+TGG | - | chr3_4:52357353-52357372 | None:intergenic | 45.0% |
| AGGTAAGTAAAGGGAGGGAT+TGG | - | chr3_4:52357552-52357571 | None:intergenic | 45.0% | |
| !! | ACTTACCTTCCATTTGGTGC+AGG | + | chr3_4:52357564-52357583 | Msa0506160:CDS | 45.0% |
| !! | CTTACCTTCCATTTGGTGCA+GGG | + | chr3_4:52357565-52357584 | Msa0506160:CDS | 45.0% |
| GCATAGGAAATGAGTTTGCC+AGG | + | chr3_4:52357598-52357617 | Msa0506160:CDS | 45.0% | |
| GGTAGTTAATGTCTCAACCC+TGG | - | chr3_4:52357619-52357638 | None:intergenic | 45.0% | |
| CCTAAGGAAGGATATGGCAT+AGG | - | chr3_4:52357708-52357727 | None:intergenic | 45.0% | |
| CCTATGCCATATCCTTCCTT+AGG | + | chr3_4:52357705-52357724 | Msa0506160:CDS | 45.0% | |
| !!! | TATATTTTTTAGTTTTAATA+TGG | + | chr3_4:52357421-52357440 | Msa0506160:intron | 5.0% |
| GGATACCCCAAAGACCCTTT+AGG | - | chr3_4:52354621-52354640 | None:intergenic | 50.0% | |
| GCGTGTTCGTGATGTGATGT+AGG | + | chr3_4:52355233-52355252 | Msa0506160:intron | 50.0% | |
| !! | TTTTTGGTGCAGGCACAGGT+TGG | + | chr3_4:52356213-52356232 | Msa0506160:intron | 50.0% |
| ! | GAGGTGCCAGGGAAATTGAT+TGG | - | chr3_4:52356484-52356503 | None:intergenic | 50.0% |
| ! | CTCTCCAAAATGAGGTGCCA+GGG | - | chr3_4:52356495-52356514 | None:intergenic | 50.0% |
| TTTGGAGAGGCCAAAAGGCT+AGG | + | chr3_4:52356506-52356525 | Msa0506160:CDS | 50.0% | |
| TTGGAGAGGCCAAAAGGCTA+GGG | + | chr3_4:52356507-52356526 | Msa0506160:CDS | 50.0% | |
| AGGATGATCCCTCCCTTGTT+TGG | + | chr3_4:52357279-52357298 | Msa0506160:CDS | 50.0% | |
| ! | ATGATCCCTCCCTTGTTTGG+TGG | + | chr3_4:52357282-52357301 | Msa0506160:CDS | 50.0% |
| TGACATCCAAAAAGGGTGGC+AGG | + | chr3_4:52357344-52357363 | Msa0506160:CDS | 50.0% | |
| !! | AGTAAAGGGAGGGATTGGCT+TGG | - | chr3_4:52357547-52357566 | None:intergenic | 50.0% |
| TTATGACGCCCTGCACCAAA+TGG | - | chr3_4:52357576-52357595 | None:intergenic | 50.0% | |
| ! | GCAGGGCGTCATAATTGCAT+AGG | + | chr3_4:52357582-52357601 | Msa0506160:CDS | 50.0% |
| !! | GGCAAGATAAGGGCTCTGAG+TGG | + | chr3_4:52354679-52354698 | Msa0506160:CDS | 55.0% |
| !! | TGCAGGCACAGGTTGGTGAA+GGG | + | chr3_4:52356220-52356239 | Msa0506160:intron | 55.0% |
| ! | CCTCTCCAAAATGAGGTGCC+AGG | - | chr3_4:52356496-52356515 | None:intergenic | 55.0% |
| !! | CCTGGCACCTCATTTTGGAG+AGG | + | chr3_4:52356493-52356512 | Msa0506160:CDS | 55.0% |
| GGTAGGGGAACCCAGTAAGG+AGG | - | chr3_4:52354745-52354764 | None:intergenic | 60.0% | |
| CACGGTAGGGGAACCCAGTA+AGG | - | chr3_4:52354748-52354767 | None:intergenic | 60.0% | |
| !! | GTGCAGGCACAGGTTGGTGA+AGG | + | chr3_4:52356219-52356238 | Msa0506160:intron | 60.0% |
| !! | GCAGGCACAGGTTGGTGAAG+GGG | + | chr3_4:52356221-52356240 | Msa0506160:intron | 60.0% |
| !! | CAGGCACAGGTTGGTGAAGG+GGG | + | chr3_4:52356222-52356241 | Msa0506160:intron | 60.0% |
| GACGCCCTGCACCAAATGGA+AGG | - | chr3_4:52357572-52357591 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 52354506 | 52357928 | 52354506 | ID=Msa0506160;Name=Msa0506160 |
| chr3_4 | mRNA | 52354506 | 52357928 | 52354506 | ID=Msa0506160-mRNA-1;Parent=Msa0506160;Name=Msa0506160-mRNA-1;_AED=0.05;_eAED=0.05;_QI=13|1|1|1|1|1|4|158|482 |
| chr3_4 | exon | 52354506 | 52354895 | 52354506 | ID=Msa0506160-mRNA-1:exon:11396;Parent=Msa0506160-mRNA-1 |
| chr3_4 | exon | 52356225 | 52356790 | 52356225 | ID=Msa0506160-mRNA-1:exon:11397;Parent=Msa0506160-mRNA-1 |
| chr3_4 | exon | 52357175 | 52357365 | 52357175 | ID=Msa0506160-mRNA-1:exon:11398;Parent=Msa0506160-mRNA-1 |
| chr3_4 | exon | 52357456 | 52357928 | 52357456 | ID=Msa0506160-mRNA-1:exon:11399;Parent=Msa0506160-mRNA-1 |
| chr3_4 | five_prime_UTR | 52354506 | 52354518 | 52354506 | ID=Msa0506160-mRNA-1:five_prime_utr;Parent=Msa0506160-mRNA-1 |
| chr3_4 | CDS | 52354519 | 52354895 | 52354519 | ID=Msa0506160-mRNA-1:cds;Parent=Msa0506160-mRNA-1 |
| chr3_4 | CDS | 52356225 | 52356790 | 52356225 | ID=Msa0506160-mRNA-1:cds;Parent=Msa0506160-mRNA-1 |
| chr3_4 | CDS | 52357175 | 52357365 | 52357175 | ID=Msa0506160-mRNA-1:cds;Parent=Msa0506160-mRNA-1 |
| chr3_4 | CDS | 52357456 | 52357770 | 52357456 | ID=Msa0506160-mRNA-1:cds;Parent=Msa0506160-mRNA-1 |
| chr3_4 | three_prime_UTR | 52357771 | 52357928 | 52357771 | ID=Msa0506160-mRNA-1:three_prime_utr;Parent=Msa0506160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
