Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526680 | KEH43028.1 | 80.745 | 161 | 4 | 1 | 1 | 134 | 1 | 161 | 2.77e-84 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526680 | A0A072VNN2 | 80.745 | 161 | 4 | 1 | 1 | 134 | 1 | 161 | 1.32e-84 | 253 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030160 | Msa0526680 | 0.816613 | 5.052918e-52 | -8.615850e-47 |
| Msa0035020 | Msa0526680 | 0.809170 | 2.160285e-50 | -8.615850e-47 |
| Msa0092410 | Msa0526680 | 0.804520 | 2.076507e-49 | -8.615850e-47 |
| Msa0125650 | Msa0526680 | 0.808384 | 3.180561e-50 | -8.615850e-47 |
| Msa0137800 | Msa0526680 | 0.833567 | 4.951309e-56 | -8.615850e-47 |
| Msa0217700 | Msa0526680 | 0.822054 | 2.908828e-53 | -8.615850e-47 |
| Msa0240900 | Msa0526680 | 0.826385 | 2.793433e-54 | -8.615850e-47 |
| Msa0264830 | Msa0526680 | 0.800961 | 1.127346e-48 | -8.615850e-47 |
| Msa0267790 | Msa0526680 | 0.935008 | 1.663780e-96 | -8.615850e-47 |
| Msa0269560 | Msa0526680 | 0.807323 | 5.346187e-50 | -8.615850e-47 |
| Msa0296820 | Msa0526680 | 0.806738 | 7.110106e-50 | -8.615850e-47 |
| Msa0302870 | Msa0526680 | 0.802486 | 5.484636e-49 | -8.615850e-47 |
| Msa0317970 | Msa0526680 | 0.837808 | 4.177393e-57 | -8.615850e-47 |
| Msa0340340 | Msa0526680 | 0.800763 | 1.237358e-48 | -8.615850e-47 |
| Msa0485240 | Msa0526680 | 0.816261 | 6.057770e-52 | -8.615850e-47 |
| Msa0526680 | Msa0526730 | 0.956765 | 1.359842e-114 | -8.615850e-47 |
| Msa0526680 | Msa0562570 | 0.803683 | 3.101519e-49 | -8.615850e-47 |
| Msa0526680 | Msa0574600 | 0.808782 | 2.614610e-50 | -8.615850e-47 |
| Msa0526680 | Msa0582480 | 0.802692 | 4.973730e-49 | -8.615850e-47 |
| Msa0526680 | Msa0583360 | -0.827418 | 1.581914e-54 | -8.615850e-47 |
| Msa0526680 | Msa0697590 | 0.809088 | 2.249488e-50 | -8.615850e-47 |
| Msa0526680 | Msa0708310 | 0.826459 | 2.681969e-54 | -8.615850e-47 |
| Msa0526680 | Msa0711150 | 0.809092 | 2.244539e-50 | -8.615850e-47 |
| Msa0526680 | Msa0742210 | 0.811046 | 8.513861e-51 | -8.615850e-47 |
| Msa0526680 | Msa0823370 | 0.823714 | 1.193873e-53 | -8.615850e-47 |
| Msa0526680 | Msa0828240 | 0.804274 | 2.336968e-49 | -8.615850e-47 |
| Msa0526680 | Msa0833530 | 0.832937 | 7.106434e-56 | -8.615850e-47 |
| Msa0526680 | Msa0965290 | 0.805639 | 1.211593e-49 | -8.615850e-47 |
| Msa0526680 | Msa0999680 | 0.810612 | 1.056866e-50 | -8.615850e-47 |
| Msa0526680 | Msa1012800 | 0.803116 | 4.064969e-49 | -8.615850e-47 |
| Msa0526680 | Msa1089450 | 0.831013 | 2.123359e-55 | -8.615850e-47 |
| Msa0526680 | Msa1145810 | 0.806912 | 6.533110e-50 | -8.615850e-47 |
| Msa0526680 | Msa1155170 | -0.815884 | 7.353883e-52 | -8.615850e-47 |
| Msa0526680 | Msa1219000 | 0.807319 | 5.357186e-50 | -8.615850e-47 |
| Msa0526680 | Msa1225860 | -0.826793 | 2.231743e-54 | -8.615850e-47 |
| Msa0526680 | Msa1226470 | 0.802331 | 5.902734e-49 | -8.615850e-47 |
| Msa0526680 | Msa1277150 | 0.800456 | 1.429342e-48 | -8.615850e-47 |
| Msa0526680 | Msa1341840 | 0.815125 | 1.085110e-51 | -8.615850e-47 |
| Msa0526680 | Msa1345940 | 0.822485 | 2.309717e-53 | -8.615850e-47 |
| Msa0526680 | Msa1353890 | 0.826673 | 2.384667e-54 | -8.615850e-47 |
| Msa0526680 | Msa1380220 | 0.803825 | 2.897707e-49 | -8.615850e-47 |
| Msa0526680 | Msa1390290 | 0.932814 | 4.831872e-95 | -8.615850e-47 |
| Msa0526680 | Msa1418240 | 0.813486 | 2.497984e-51 | -8.615850e-47 |
| Msa0526680 | Msa1430550 | 0.813374 | 2.643278e-51 | -8.615850e-47 |
| Msa0526680 | Msa1461540 | 0.804754 | 1.855833e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526680 | MtrunA17_Chr1g0190821 | 84.466 | 103 | 16 | 0 | 1 | 103 | 1 | 103 | 2.70e-58 | 179 |
| Msa0526680 | MtrunA17_Chr1g0190821 | 60.000 | 100 | 30 | 3 | 35 | 134 | 114 | 203 | 2.30e-32 | 113 |
| Msa0526680 | MtrunA17_Chr7g0273981 | 44.898 | 98 | 50 | 2 | 1 | 94 | 1 | 98 | 2.47e-21 | 85.1 |
| Msa0526680 | MtrunA17_Chr1g0166401 | 39.474 | 114 | 60 | 4 | 12 | 121 | 10 | 118 | 6.63e-20 | 81.6 |
| Msa0526680 | MtrunA17_Chr7g0273961 | 40.625 | 96 | 48 | 4 | 1 | 93 | 1 | 90 | 4.30e-15 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526680 | AT4G14746.2 | 34.483 | 87 | 47 | 2 | 10 | 92 | 10 | 90 | 1.95e-11 | 58.9 |
Find 55 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTGAACTTCATGATTAT+TGG | 0.205428 | 3_4:+80693368 | Msa0526680:three_prime_UTR |
| TTTGTTTGTGAATGCGATTC+TGG | 0.220907 | 3_4:+80691981 | Msa0526680:CDS |
| TCCCCAGCAAGCTCAATCTT+TGG | 0.317543 | 3_4:+80693256 | Msa0526680:intron |
| TGAAACTTTAATTCCAAGTC+TGG | 0.344971 | 3_4:-80692971 | None:intergenic |
| AAAGCCATGATTCGGTCATT+TGG | 0.351572 | 3_4:+80693473 | Msa0526680:three_prime_UTR |
| TGTCACAAATAGTATAGAAT+TGG | 0.368876 | 3_4:-80691588 | None:intergenic |
| ATGGGTTCTTTCAAGTTGTT+GGG | 0.370656 | 3_4:+80691618 | Msa0526680:CDS |
| AATGGGTTCTTTCAAGTTGT+TGG | 0.394087 | 3_4:+80691617 | Msa0526680:exon |
| TAGTATAGAATTGGAAAGTA+AGG | 0.405695 | 3_4:-80691579 | None:intergenic |
| ATATATCATCATCTTCATCT+TGG | 0.410673 | 3_4:-80692016 | None:intergenic |
| ATTAAAGTTTCAAATTCAAC+CGG | 0.417259 | 3_4:+80692982 | Msa0526680:CDS |
| TATATCATCATCTTCATCTT+GGG | 0.418577 | 3_4:-80692015 | None:intergenic |
| GGATCTGATTGTTCCAGACT+TGG | 0.423037 | 3_4:+80692958 | Msa0526680:CDS |
| AAAATCCCCTTTGGCAGCCA+TGG | 0.429161 | 3_4:-80691673 | None:intergenic |
| GCTCTGAGTTAATAATATAT+AGG | 0.429548 | 3_4:-80693572 | None:intergenic |
| ACAACTTGAAAGAACCCATT+TGG | 0.437082 | 3_4:-80691614 | None:intergenic |
| CTATTTGTGACATTACCAAA+TGG | 0.447019 | 3_4:+80691599 | Msa0526680:exon |
| TATTTGTGACATTACCAAAT+GGG | 0.457004 | 3_4:+80691600 | Msa0526680:exon |
| ACTGTGTTGTTGATTTCAAC+GGG | 0.460186 | 3_4:+80693298 | Msa0526680:CDS |
| TACTTCCCATGGCTGCCAAA+GGG | 0.472045 | 3_4:+80691667 | Msa0526680:CDS |
| CATGATTATTGGAAGTCTGA+TGG | 0.481518 | 3_4:+80693379 | Msa0526680:three_prime_UTR |
| CACTGTGTTGTTGATTTCAA+CGG | 0.481718 | 3_4:+80693297 | Msa0526680:CDS |
| TCTTTGGAGGAAGGTTCCAT+TGG | 0.490994 | 3_4:+80693272 | Msa0526680:CDS |
| TTTCAACGGGTATGGTTATG+TGG | 0.491371 | 3_4:+80693311 | Msa0526680:CDS |
| GTTGTTGATTTCAACGGGTA+TGG | 0.491561 | 3_4:+80693303 | Msa0526680:CDS |
| CCAGCAAGCTCAATCTTTGG+AGG | 0.494478 | 3_4:+80693259 | Msa0526680:intron |
| ATCATCAACAAAATCCCCTT+TGG | 0.497557 | 3_4:-80691682 | None:intergenic |
| ATGGTTATGTGGAGCTAGCT+AGG | 0.499858 | 3_4:+80693322 | Msa0526680:exon |
| GTTGTTGGGTCTTATAGCCA+TGG | 0.505786 | 3_4:+80691632 | Msa0526680:CDS |
| AGGAAAGATATATGTTTACA+TGG | 0.507017 | 3_4:-80693552 | None:intergenic |
| AGCTAGCTAGGATGCATAGA+TGG | 0.514556 | 3_4:+80693334 | Msa0526680:exon |
| ATTCACAAACAAAGTTCAAA+GGG | 0.522384 | 3_4:-80691971 | None:intergenic |
| TTTGTGAATGCGATTCTGGC+TGG | 0.522677 | 3_4:+80691985 | Msa0526680:CDS |
| ATCTCCAAATGACCGAATCA+TGG | 0.531113 | 3_4:-80693477 | None:intergenic |
| ACCATGACTCTCAACATCTC+CGG | 0.532665 | 3_4:-80693001 | None:intergenic |
| CATTCACAAACAAAGTTCAA+AGG | 0.535528 | 3_4:-80691972 | None:intergenic |
| ATGATTATTGGAAGTCTGAT+GGG | 0.536155 | 3_4:+80693380 | Msa0526680:three_prime_UTR |
| ATGATGACTATTGTATCATA+TGG | 0.544177 | 3_4:+80693498 | Msa0526680:three_prime_UTR |
| CTACTTCCCATGGCTGCCAA+AGG | 0.546322 | 3_4:+80691666 | Msa0526680:CDS |
| TCTCATGTTACTACTTCCCA+TGG | 0.547836 | 3_4:+80691656 | Msa0526680:CDS |
| TCATTAATAAAGCCATGATT+CGG | 0.551833 | 3_4:+80693465 | Msa0526680:three_prime_UTR |
| CAAGCTCAATCTTTGGAGGA+AGG | 0.555181 | 3_4:+80693263 | Msa0526680:CDS |
| AGAAAAGGTTTGTGAAGAAG+TGG | 0.556344 | 3_4:+80691911 | Msa0526680:intron |
| AAATCCCCTTTGGCAGCCAT+GGG | 0.560106 | 3_4:-80691672 | None:intergenic |
| TCAACAACACAGTGATCCAA+TGG | 0.563270 | 3_4:-80693288 | None:intergenic |
| TATTTAATGTGATAAGTACA+AGG | 0.565323 | 3_4:-80693605 | None:intergenic |
| ACCGGAGATGTTGAGAGTCA+TGG | 0.572906 | 3_4:+80693000 | Msa0526680:CDS |
| GAAGAAGTGGAGTGTGGGAA+AGG | 0.596466 | 3_4:+80691924 | Msa0526680:CDS |
| GGAAAGATATATGTTTACAT+GGG | 0.608873 | 3_4:-80693551 | None:intergenic |
| ACTTCCCATGGCTGCCAAAG+GGG | 0.616013 | 3_4:+80691668 | Msa0526680:CDS |
| GTTTGTGAAGAAGTGGAGTG+TGG | 0.633621 | 3_4:+80691918 | Msa0526680:CDS |
| TTTGTGAAGAAGTGGAGTGT+GGG | 0.637331 | 3_4:+80691919 | Msa0526680:CDS |
| TTACATTGAGGAATGACACA+TGG | 0.645633 | 3_4:-80692056 | None:intergenic |
| AAGTAGTAACATGAGAACCA+TGG | 0.695164 | 3_4:-80691649 | None:intergenic |
| GTGTGGGAAAGGAAACTGTG+TGG | 0.765418 | 3_4:+80691935 | Msa0526680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATGTCA+CGG | - | chr3_4:80691876-80691895 | None:intergenic | 10.0% |
| !!! | TAACTTAATTTTTTTTATGA+AGG | + | chr3_4:80692152-80692171 | Msa0526680:intron | 10.0% |
| !! | ATATATATATATATATGTCA+CGG | - | chr3_4:80691876-80691895 | None:intergenic | 10.0% |
| !!! | TAACTTAATTTTTTTTATGA+AGG | + | chr3_4:80692152-80692171 | Msa0526680:intron | 10.0% |
| !! | TATATATGCATTAGATATAT+AGG | - | chr3_4:80691752-80691771 | None:intergenic | 15.0% |
| !! | GTGACATATATATATATATA+TGG | + | chr3_4:80691875-80691894 | Msa0526680:intron | 15.0% |
| !!! | AAAGGTTCATAATTTTTTTT+TGG | + | chr3_4:80692537-80692556 | Msa0526680:intron | 15.0% |
| !! | TTGAGAAGATTATAATAATT+GGG | - | chr3_4:80692784-80692803 | None:intergenic | 15.0% |
| !! | ATTGAGAAGATTATAATAAT+TGG | - | chr3_4:80692785-80692804 | None:intergenic | 15.0% |
| !! | CAAAATAACTGAATAAATAA+AGG | - | chr3_4:80692851-80692870 | None:intergenic | 15.0% |
| !! | TATATATGCATTAGATATAT+AGG | - | chr3_4:80691752-80691771 | None:intergenic | 15.0% |
| !! | GTGACATATATATATATATA+TGG | + | chr3_4:80691875-80691894 | Msa0526680:intron | 15.0% |
| !!! | AAAGGTTCATAATTTTTTTT+TGG | + | chr3_4:80692537-80692556 | Msa0526680:intron | 15.0% |
| !! | TTGAGAAGATTATAATAATT+GGG | - | chr3_4:80692784-80692803 | None:intergenic | 15.0% |
| !! | ATTGAGAAGATTATAATAAT+TGG | - | chr3_4:80692785-80692804 | None:intergenic | 15.0% |
| !! | CAAAATAACTGAATAAATAA+AGG | - | chr3_4:80692851-80692870 | None:intergenic | 15.0% |
| !! | ATATCTAATGCATATATACA+TGG | + | chr3_4:80691754-80691773 | Msa0526680:intron | 20.0% |
| !! | TATTCTATCATTTATCTTGT+AGG | + | chr3_4:80692206-80692225 | Msa0526680:intron | 20.0% |
| !! | AACCATATTATCAATTCAAA+AGG | + | chr3_4:80692519-80692538 | Msa0526680:intron | 20.0% |
| !!! | AACCTTTTGAATTGATAATA+TGG | - | chr3_4:80692524-80692543 | None:intergenic | 20.0% |
| !! | TTCATATTATATGCACAAAA+AGG | + | chr3_4:80692568-80692587 | Msa0526680:intron | 20.0% |
| !! | TGAGAAGATTATAATAATTG+GGG | - | chr3_4:80692783-80692802 | None:intergenic | 20.0% |
| !! | ACTGAATAAATAAAGGTTTA+AGG | - | chr3_4:80692844-80692863 | None:intergenic | 20.0% |
| !!! | TTATTCAGTTATTTTGACAA+TGG | + | chr3_4:80692855-80692874 | Msa0526680:intron | 20.0% |
| !! | ATTAAAGTTTCAAATTCAAC+CGG | + | chr3_4:80692982-80693001 | Msa0526680:CDS | 20.0% |
| !!! | GGTTCAAGATTTTTAAATTT+AGG | + | chr3_4:80693126-80693145 | Msa0526680:intron | 20.0% |
| !!! | AAATTTTGCTAGTTTTCTTA+TGG | + | chr3_4:80693158-80693177 | Msa0526680:intron | 20.0% |
| !! | TATTTAATGTGATAAGTACA+AGG | - | chr3_4:80693608-80693627 | None:intergenic | 20.0% |
| !! | GTACTATAACAATAAGAATT+AGG | - | chr3_4:80691549-80691568 | None:intergenic | 20.0% |
| !! | ATATCTAATGCATATATACA+TGG | + | chr3_4:80691754-80691773 | Msa0526680:intron | 20.0% |
| !! | TATTCTATCATTTATCTTGT+AGG | + | chr3_4:80692206-80692225 | Msa0526680:intron | 20.0% |
| !! | AACCATATTATCAATTCAAA+AGG | + | chr3_4:80692519-80692538 | Msa0526680:intron | 20.0% |
| !!! | AACCTTTTGAATTGATAATA+TGG | - | chr3_4:80692524-80692543 | None:intergenic | 20.0% |
| !! | TTCATATTATATGCACAAAA+AGG | + | chr3_4:80692568-80692587 | Msa0526680:intron | 20.0% |
| !! | TGAGAAGATTATAATAATTG+GGG | - | chr3_4:80692783-80692802 | None:intergenic | 20.0% |
| !! | ACTGAATAAATAAAGGTTTA+AGG | - | chr3_4:80692844-80692863 | None:intergenic | 20.0% |
| !!! | TTATTCAGTTATTTTGACAA+TGG | + | chr3_4:80692855-80692874 | Msa0526680:intron | 20.0% |
| !! | ATTAAAGTTTCAAATTCAAC+CGG | + | chr3_4:80692982-80693001 | Msa0526680:CDS | 20.0% |
| !!! | GGTTCAAGATTTTTAAATTT+AGG | + | chr3_4:80693126-80693145 | Msa0526680:intron | 20.0% |
| !!! | AAATTTTGCTAGTTTTCTTA+TGG | + | chr3_4:80693158-80693177 | Msa0526680:intron | 20.0% |
| !! | TATTTAATGTGATAAGTACA+AGG | - | chr3_4:80693608-80693627 | None:intergenic | 20.0% |
| ! | TAGTATAGAATTGGAAAGTA+AGG | - | chr3_4:80691582-80691601 | None:intergenic | 25.0% |
| ! | TGTCACAAATAGTATAGAAT+TGG | - | chr3_4:80691591-80691610 | None:intergenic | 25.0% |
| ! | TATTTGTGACATTACCAAAT+GGG | + | chr3_4:80691600-80691619 | Msa0526680:exon | 25.0% |
| ! | GGATATATTAATTGCAGAAA+AGG | + | chr3_4:80691896-80691915 | Msa0526680:intron | 25.0% |
| ! | ATTCACAAACAAAGTTCAAA+GGG | - | chr3_4:80691974-80691993 | None:intergenic | 25.0% |
| ! | TATATCATCATCTTCATCTT+GGG | - | chr3_4:80692018-80692037 | None:intergenic | 25.0% |
| ! | ATATATCATCATCTTCATCT+TGG | - | chr3_4:80692019-80692038 | None:intergenic | 25.0% |
| ! | AGAGATTGAAATTTACATTG+AGG | - | chr3_4:80692071-80692090 | None:intergenic | 25.0% |
| ! | CAAGTAAATAAGAGTTAGTA+AGG | - | chr3_4:80692100-80692119 | None:intergenic | 25.0% |
| ! | CAAGATAAATGATAGAATAG+AGG | - | chr3_4:80692205-80692224 | None:intergenic | 25.0% |
| ! | AATTGAAGTTCATTAACACT+AGG | + | chr3_4:80692428-80692447 | Msa0526680:intron | 25.0% |
| ! | ATTGAAGTTCATTAACACTA+GGG | + | chr3_4:80692429-80692448 | Msa0526680:intron | 25.0% |
| !!! | AATATGGTTCAGTTTTTTTG+TGG | - | chr3_4:80692508-80692527 | None:intergenic | 25.0% |
| !!! | ATATTTTTGTAGCTTGCTAT+TGG | + | chr3_4:80692695-80692714 | Msa0526680:intron | 25.0% |
| !!! | TATTTTTGTAGCTTGCTATT+GGG | + | chr3_4:80692696-80692715 | Msa0526680:intron | 25.0% |
| !!! | TTAAATTTTGAAGGTACTCT+TGG | + | chr3_4:80692937-80692956 | Msa0526680:intron | 25.0% |
| ! | TCATTAATAAAGCCATGATT+CGG | + | chr3_4:80693465-80693484 | Msa0526680:three_prime_UTR | 25.0% |
| ! | ATGATGACTATTGTATCATA+TGG | + | chr3_4:80693498-80693517 | Msa0526680:three_prime_UTR | 25.0% |
| ! | GGAAAGATATATGTTTACAT+GGG | - | chr3_4:80693554-80693573 | None:intergenic | 25.0% |
| ! | AGGAAAGATATATGTTTACA+TGG | - | chr3_4:80693555-80693574 | None:intergenic | 25.0% |
| !! | GCTCTGAGTTAATAATATAT+AGG | - | chr3_4:80693575-80693594 | None:intergenic | 25.0% |
| ! | TAGTATAGAATTGGAAAGTA+AGG | - | chr3_4:80691582-80691601 | None:intergenic | 25.0% |
| ! | TGTCACAAATAGTATAGAAT+TGG | - | chr3_4:80691591-80691610 | None:intergenic | 25.0% |
| ! | TATTTGTGACATTACCAAAT+GGG | + | chr3_4:80691600-80691619 | Msa0526680:exon | 25.0% |
| ! | GGATATATTAATTGCAGAAA+AGG | + | chr3_4:80691896-80691915 | Msa0526680:intron | 25.0% |
| ! | ATTCACAAACAAAGTTCAAA+GGG | - | chr3_4:80691974-80691993 | None:intergenic | 25.0% |
| ! | TATATCATCATCTTCATCTT+GGG | - | chr3_4:80692018-80692037 | None:intergenic | 25.0% |
| ! | ATATATCATCATCTTCATCT+TGG | - | chr3_4:80692019-80692038 | None:intergenic | 25.0% |
| ! | AGAGATTGAAATTTACATTG+AGG | - | chr3_4:80692071-80692090 | None:intergenic | 25.0% |
| ! | CAAGTAAATAAGAGTTAGTA+AGG | - | chr3_4:80692100-80692119 | None:intergenic | 25.0% |
| ! | CAAGATAAATGATAGAATAG+AGG | - | chr3_4:80692205-80692224 | None:intergenic | 25.0% |
| ! | AATTGAAGTTCATTAACACT+AGG | + | chr3_4:80692428-80692447 | Msa0526680:intron | 25.0% |
| ! | ATTGAAGTTCATTAACACTA+GGG | + | chr3_4:80692429-80692448 | Msa0526680:intron | 25.0% |
| !!! | AATATGGTTCAGTTTTTTTG+TGG | - | chr3_4:80692508-80692527 | None:intergenic | 25.0% |
| !!! | ATATTTTTGTAGCTTGCTAT+TGG | + | chr3_4:80692695-80692714 | Msa0526680:intron | 25.0% |
| !!! | TATTTTTGTAGCTTGCTATT+GGG | + | chr3_4:80692696-80692715 | Msa0526680:intron | 25.0% |
| !!! | TTAAATTTTGAAGGTACTCT+TGG | + | chr3_4:80692937-80692956 | Msa0526680:intron | 25.0% |
| ! | TCATTAATAAAGCCATGATT+CGG | + | chr3_4:80693465-80693484 | Msa0526680:three_prime_UTR | 25.0% |
| ! | ATGATGACTATTGTATCATA+TGG | + | chr3_4:80693498-80693517 | Msa0526680:three_prime_UTR | 25.0% |
| ! | GGAAAGATATATGTTTACAT+GGG | - | chr3_4:80693554-80693573 | None:intergenic | 25.0% |
| ! | AGGAAAGATATATGTTTACA+TGG | - | chr3_4:80693555-80693574 | None:intergenic | 25.0% |
| !! | GCTCTGAGTTAATAATATAT+AGG | - | chr3_4:80693575-80693594 | None:intergenic | 25.0% |
| CTATTTGTGACATTACCAAA+TGG | + | chr3_4:80691599-80691618 | Msa0526680:exon | 30.0% | |
| AAAAATGAGTTTACGTACCA+AGG | - | chr3_4:80691710-80691729 | None:intergenic | 30.0% | |
| CATTCACAAACAAAGTTCAA+AGG | - | chr3_4:80691975-80691994 | None:intergenic | 30.0% | |
| GTAAATAAGAGTTAGTAAGG+AGG | - | chr3_4:80692097-80692116 | None:intergenic | 30.0% | |
| TGATAGAATAGAGGAGATTT+AGG | - | chr3_4:80692196-80692215 | None:intergenic | 30.0% | |
| !! | ACTTAACTCTTTGTTGACTT+TGG | + | chr3_4:80692323-80692342 | Msa0526680:intron | 30.0% |
| AGTAAAGTCTTGCTAAAATC+AGG | + | chr3_4:80692371-80692390 | Msa0526680:intron | 30.0% | |
| TTGAAGTTCATTAACACTAG+GGG | + | chr3_4:80692430-80692449 | Msa0526680:intron | 30.0% | |
| ACAAAAAGGTTTCATGAGTT+TGG | + | chr3_4:80692582-80692601 | Msa0526680:intron | 30.0% | |
| AGAAGAATATTGACCAAACA+TGG | + | chr3_4:80692895-80692914 | Msa0526680:intron | 30.0% | |
| CCAAGATATTAATCCATGTT+TGG | - | chr3_4:80692911-80692930 | None:intergenic | 30.0% | |
| ! | CCAAACATGGATTAATATCT+TGG | + | chr3_4:80692908-80692927 | Msa0526680:intron | 30.0% |
| ! | AACATGGATTAATATCTTGG+TGG | + | chr3_4:80692911-80692930 | Msa0526680:intron | 30.0% |
| !!! | TGGTGGACTTTAAATTTTGA+AGG | + | chr3_4:80692928-80692947 | Msa0526680:intron | 30.0% |
| TGAAACTTTAATTCCAAGTC+TGG | - | chr3_4:80692974-80692993 | None:intergenic | 30.0% | |
| TGGTAACAATTTCTGTGTTA+GGG | - | chr3_4:80693094-80693113 | None:intergenic | 30.0% | |
| ! | TTGGTAACAATTTCTGTGTT+AGG | - | chr3_4:80693095-80693114 | None:intergenic | 30.0% |
| AACACAGAAATTGTTACCAA+CGG | + | chr3_4:80693095-80693114 | Msa0526680:intron | 30.0% | |
| ! | TTCTGATGATGTGTCTAATT+TGG | + | chr3_4:80693230-80693249 | Msa0526680:intron | 30.0% |
| ATGATTATTGGAAGTCTGAT+GGG | + | chr3_4:80693380-80693399 | Msa0526680:three_prime_UTR | 30.0% | |
| CTATTTGTGACATTACCAAA+TGG | + | chr3_4:80691599-80691618 | Msa0526680:exon | 30.0% | |
| AAAAATGAGTTTACGTACCA+AGG | - | chr3_4:80691710-80691729 | None:intergenic | 30.0% | |
| CATTCACAAACAAAGTTCAA+AGG | - | chr3_4:80691975-80691994 | None:intergenic | 30.0% | |
| GTAAATAAGAGTTAGTAAGG+AGG | - | chr3_4:80692097-80692116 | None:intergenic | 30.0% | |
| TGATAGAATAGAGGAGATTT+AGG | - | chr3_4:80692196-80692215 | None:intergenic | 30.0% | |
| !! | ACTTAACTCTTTGTTGACTT+TGG | + | chr3_4:80692323-80692342 | Msa0526680:intron | 30.0% |
| AGTAAAGTCTTGCTAAAATC+AGG | + | chr3_4:80692371-80692390 | Msa0526680:intron | 30.0% | |
| TTGAAGTTCATTAACACTAG+GGG | + | chr3_4:80692430-80692449 | Msa0526680:intron | 30.0% | |
| ACAAAAAGGTTTCATGAGTT+TGG | + | chr3_4:80692582-80692601 | Msa0526680:intron | 30.0% | |
| AGAAGAATATTGACCAAACA+TGG | + | chr3_4:80692895-80692914 | Msa0526680:intron | 30.0% | |
| CCAAGATATTAATCCATGTT+TGG | - | chr3_4:80692911-80692930 | None:intergenic | 30.0% | |
| ! | CCAAACATGGATTAATATCT+TGG | + | chr3_4:80692908-80692927 | Msa0526680:intron | 30.0% |
| ! | AACATGGATTAATATCTTGG+TGG | + | chr3_4:80692911-80692930 | Msa0526680:intron | 30.0% |
| !!! | TGGTGGACTTTAAATTTTGA+AGG | + | chr3_4:80692928-80692947 | Msa0526680:intron | 30.0% |
| TGAAACTTTAATTCCAAGTC+TGG | - | chr3_4:80692974-80692993 | None:intergenic | 30.0% | |
| TGGTAACAATTTCTGTGTTA+GGG | - | chr3_4:80693094-80693113 | None:intergenic | 30.0% | |
| ! | TTGGTAACAATTTCTGTGTT+AGG | - | chr3_4:80693095-80693114 | None:intergenic | 30.0% |
| AACACAGAAATTGTTACCAA+CGG | + | chr3_4:80693095-80693114 | Msa0526680:intron | 30.0% | |
| ! | TTCTGATGATGTGTCTAATT+TGG | + | chr3_4:80693230-80693249 | Msa0526680:intron | 30.0% |
| ATGATTATTGGAAGTCTGAT+GGG | + | chr3_4:80693380-80693399 | Msa0526680:three_prime_UTR | 30.0% | |
| ACAACTTGAAAGAACCCATT+TGG | - | chr3_4:80691617-80691636 | None:intergenic | 35.0% | |
| !! | AATGGGTTCTTTCAAGTTGT+TGG | + | chr3_4:80691617-80691636 | Msa0526680:exon | 35.0% |
| !! | ATGGGTTCTTTCAAGTTGTT+GGG | + | chr3_4:80691618-80691637 | Msa0526680:CDS | 35.0% |
| AAGTAGTAACATGAGAACCA+TGG | - | chr3_4:80691652-80691671 | None:intergenic | 35.0% | |
| ATCATCAACAAAATCCCCTT+TGG | - | chr3_4:80691685-80691704 | None:intergenic | 35.0% | |
| !!! | GATTTTGTTGATGATGTCCT+TGG | + | chr3_4:80691690-80691709 | Msa0526680:CDS | 35.0% |
| AGAAAAGGTTTGTGAAGAAG+TGG | + | chr3_4:80691911-80691930 | Msa0526680:intron | 35.0% | |
| TTTGTTTGTGAATGCGATTC+TGG | + | chr3_4:80691981-80692000 | Msa0526680:CDS | 35.0% | |
| TTACATTGAGGAATGACACA+TGG | - | chr3_4:80692059-80692078 | None:intergenic | 35.0% | |
| CTTGTAGGTAGCTTGAATTA+TGG | + | chr3_4:80692221-80692240 | Msa0526680:intron | 35.0% | |
| GTTACACTTACGATCAAAAG+CGG | - | chr3_4:80692300-80692319 | None:intergenic | 35.0% | |
| ATCCATAAACTGAACCAAAC+TGG | + | chr3_4:80692481-80692500 | Msa0526680:intron | 35.0% | |
| !!! | AGTTTTTTTGTGGTCCAGTT+TGG | - | chr3_4:80692498-80692517 | None:intergenic | 35.0% |
| GCTTACATTCACTGTAACAA+GGG | - | chr3_4:80692819-80692838 | None:intergenic | 35.0% | |
| TGCTTACATTCACTGTAACA+AGG | - | chr3_4:80692820-80692839 | None:intergenic | 35.0% | |
| !! | CACTGTGTTGTTGATTTCAA+CGG | + | chr3_4:80693297-80693316 | Msa0526680:CDS | 35.0% |
| !! | ACTGTGTTGTTGATTTCAAC+GGG | + | chr3_4:80693298-80693317 | Msa0526680:CDS | 35.0% |
| GTGCTGAACTTCATGATTAT+TGG | + | chr3_4:80693368-80693387 | Msa0526680:three_prime_UTR | 35.0% | |
| CATGATTATTGGAAGTCTGA+TGG | + | chr3_4:80693379-80693398 | Msa0526680:three_prime_UTR | 35.0% | |
| ACAACTTGAAAGAACCCATT+TGG | - | chr3_4:80691617-80691636 | None:intergenic | 35.0% | |
| !! | AATGGGTTCTTTCAAGTTGT+TGG | + | chr3_4:80691617-80691636 | Msa0526680:exon | 35.0% |
| !! | ATGGGTTCTTTCAAGTTGTT+GGG | + | chr3_4:80691618-80691637 | Msa0526680:CDS | 35.0% |
| AAGTAGTAACATGAGAACCA+TGG | - | chr3_4:80691652-80691671 | None:intergenic | 35.0% | |
| ATCATCAACAAAATCCCCTT+TGG | - | chr3_4:80691685-80691704 | None:intergenic | 35.0% | |
| !!! | GATTTTGTTGATGATGTCCT+TGG | + | chr3_4:80691690-80691709 | Msa0526680:CDS | 35.0% |
| AGAAAAGGTTTGTGAAGAAG+TGG | + | chr3_4:80691911-80691930 | Msa0526680:intron | 35.0% | |
| TTTGTTTGTGAATGCGATTC+TGG | + | chr3_4:80691981-80692000 | Msa0526680:CDS | 35.0% | |
| TTACATTGAGGAATGACACA+TGG | - | chr3_4:80692059-80692078 | None:intergenic | 35.0% | |
| CTTGTAGGTAGCTTGAATTA+TGG | + | chr3_4:80692221-80692240 | Msa0526680:intron | 35.0% | |
| GTTACACTTACGATCAAAAG+CGG | - | chr3_4:80692300-80692319 | None:intergenic | 35.0% | |
| ATCCATAAACTGAACCAAAC+TGG | + | chr3_4:80692481-80692500 | Msa0526680:intron | 35.0% | |
| !!! | AGTTTTTTTGTGGTCCAGTT+TGG | - | chr3_4:80692498-80692517 | None:intergenic | 35.0% |
| GCTTACATTCACTGTAACAA+GGG | - | chr3_4:80692819-80692838 | None:intergenic | 35.0% | |
| TGCTTACATTCACTGTAACA+AGG | - | chr3_4:80692820-80692839 | None:intergenic | 35.0% | |
| !! | CACTGTGTTGTTGATTTCAA+CGG | + | chr3_4:80693297-80693316 | Msa0526680:CDS | 35.0% |
| !! | ACTGTGTTGTTGATTTCAAC+GGG | + | chr3_4:80693298-80693317 | Msa0526680:CDS | 35.0% |
| GTGCTGAACTTCATGATTAT+TGG | + | chr3_4:80693368-80693387 | Msa0526680:three_prime_UTR | 35.0% | |
| CATGATTATTGGAAGTCTGA+TGG | + | chr3_4:80693379-80693398 | Msa0526680:three_prime_UTR | 35.0% | |
| TCTCATGTTACTACTTCCCA+TGG | + | chr3_4:80691656-80691675 | Msa0526680:CDS | 40.0% | |
| TTTGTGAAGAAGTGGAGTGT+GGG | + | chr3_4:80691919-80691938 | Msa0526680:CDS | 40.0% | |
| TCAAAAGCGGAAATATTGCG+AGG | - | chr3_4:80692287-80692306 | None:intergenic | 40.0% | |
| ! | GTCCAGTTTGGTTCAGTTTA+TGG | - | chr3_4:80692486-80692505 | None:intergenic | 40.0% |
| TATTGGGCATATTGTGGAGA+AGG | + | chr3_4:80692712-80692731 | Msa0526680:intron | 40.0% | |
| ! | GTGTGTATGTGTCTTGTTCT+TGG | - | chr3_4:80692746-80692765 | None:intergenic | 40.0% |
| !! | TTGTTACCAACGGACTAATG+AGG | + | chr3_4:80693105-80693124 | Msa0526680:intron | 40.0% |
| TCAACAACACAGTGATCCAA+TGG | - | chr3_4:80693291-80693310 | None:intergenic | 40.0% | |
| !! | GTTGTTGATTTCAACGGGTA+TGG | + | chr3_4:80693303-80693322 | Msa0526680:CDS | 40.0% |
| TTTCAACGGGTATGGTTATG+TGG | + | chr3_4:80693311-80693330 | Msa0526680:CDS | 40.0% | |
| !! | AAAGCCATGATTCGGTCATT+TGG | + | chr3_4:80693473-80693492 | Msa0526680:three_prime_UTR | 40.0% |
| ATCTCCAAATGACCGAATCA+TGG | - | chr3_4:80693480-80693499 | None:intergenic | 40.0% | |
| TCTCATGTTACTACTTCCCA+TGG | + | chr3_4:80691656-80691675 | Msa0526680:CDS | 40.0% | |
| TTTGTGAAGAAGTGGAGTGT+GGG | + | chr3_4:80691919-80691938 | Msa0526680:CDS | 40.0% | |
| TCAAAAGCGGAAATATTGCG+AGG | - | chr3_4:80692287-80692306 | None:intergenic | 40.0% | |
| ! | GTCCAGTTTGGTTCAGTTTA+TGG | - | chr3_4:80692486-80692505 | None:intergenic | 40.0% |
| TATTGGGCATATTGTGGAGA+AGG | + | chr3_4:80692712-80692731 | Msa0526680:intron | 40.0% | |
| ! | GTGTGTATGTGTCTTGTTCT+TGG | - | chr3_4:80692746-80692765 | None:intergenic | 40.0% |
| !! | TTGTTACCAACGGACTAATG+AGG | + | chr3_4:80693105-80693124 | Msa0526680:intron | 40.0% |
| TCAACAACACAGTGATCCAA+TGG | - | chr3_4:80693291-80693310 | None:intergenic | 40.0% | |
| !! | GTTGTTGATTTCAACGGGTA+TGG | + | chr3_4:80693303-80693322 | Msa0526680:CDS | 40.0% |
| TTTCAACGGGTATGGTTATG+TGG | + | chr3_4:80693311-80693330 | Msa0526680:CDS | 40.0% | |
| !! | AAAGCCATGATTCGGTCATT+TGG | + | chr3_4:80693473-80693492 | Msa0526680:three_prime_UTR | 40.0% |
| ATCTCCAAATGACCGAATCA+TGG | - | chr3_4:80693480-80693499 | None:intergenic | 40.0% | |
| ! | GTTGTTGGGTCTTATAGCCA+TGG | + | chr3_4:80691632-80691651 | Msa0526680:CDS | 45.0% |
| GTTTGTGAAGAAGTGGAGTG+TGG | + | chr3_4:80691918-80691937 | Msa0526680:CDS | 45.0% | |
| TTTGTGAATGCGATTCTGGC+TGG | + | chr3_4:80691985-80692004 | Msa0526680:CDS | 45.0% | |
| !! | AAAGTCTTCTCTGGAACTGG+AGG | - | chr3_4:80692263-80692282 | None:intergenic | 45.0% |
| !! | GGTAAAGTCTTCTCTGGAAC+TGG | - | chr3_4:80692266-80692285 | None:intergenic | 45.0% |
| TTGCGAGGTAAAGTCTTCTC+TGG | - | chr3_4:80692272-80692291 | None:intergenic | 45.0% | |
| ! | ACTAGGGGTGTGCAAAAATG+TGG | + | chr3_4:80692445-80692464 | Msa0526680:intron | 45.0% |
| !! | GCTTGCTATTGGGCATATTG+TGG | + | chr3_4:80692706-80692725 | Msa0526680:intron | 45.0% |
| GGATCTGATTGTTCCAGACT+TGG | + | chr3_4:80692958-80692977 | Msa0526680:CDS | 45.0% | |
| ACCATGACTCTCAACATCTC+CGG | - | chr3_4:80693004-80693023 | None:intergenic | 45.0% | |
| CTTGAACCTCATTAGTCCGT+TGG | - | chr3_4:80693114-80693133 | None:intergenic | 45.0% | |
| !! | TCCAAAGATTGAGCTTGCTG+GGG | - | chr3_4:80693260-80693279 | None:intergenic | 45.0% |
| ! | CTCCAAAGATTGAGCTTGCT+GGG | - | chr3_4:80693261-80693280 | None:intergenic | 45.0% |
| ! | CAAGCTCAATCTTTGGAGGA+AGG | + | chr3_4:80693263-80693282 | Msa0526680:CDS | 45.0% |
| ! | TCTTTGGAGGAAGGTTCCAT+TGG | + | chr3_4:80693272-80693291 | Msa0526680:CDS | 45.0% |
| ATGGTTATGTGGAGCTAGCT+AGG | + | chr3_4:80693322-80693341 | Msa0526680:exon | 45.0% | |
| AGCTAGCTAGGATGCATAGA+TGG | + | chr3_4:80693334-80693353 | Msa0526680:exon | 45.0% | |
| ! | GTTGTTGGGTCTTATAGCCA+TGG | + | chr3_4:80691632-80691651 | Msa0526680:CDS | 45.0% |
| GTTTGTGAAGAAGTGGAGTG+TGG | + | chr3_4:80691918-80691937 | Msa0526680:CDS | 45.0% | |
| TTTGTGAATGCGATTCTGGC+TGG | + | chr3_4:80691985-80692004 | Msa0526680:CDS | 45.0% | |
| !! | AAAGTCTTCTCTGGAACTGG+AGG | - | chr3_4:80692263-80692282 | None:intergenic | 45.0% |
| !! | GGTAAAGTCTTCTCTGGAAC+TGG | - | chr3_4:80692266-80692285 | None:intergenic | 45.0% |
| TTGCGAGGTAAAGTCTTCTC+TGG | - | chr3_4:80692272-80692291 | None:intergenic | 45.0% | |
| ! | ACTAGGGGTGTGCAAAAATG+TGG | + | chr3_4:80692445-80692464 | Msa0526680:intron | 45.0% |
| !! | GCTTGCTATTGGGCATATTG+TGG | + | chr3_4:80692706-80692725 | Msa0526680:intron | 45.0% |
| GGATCTGATTGTTCCAGACT+TGG | + | chr3_4:80692958-80692977 | Msa0526680:CDS | 45.0% | |
| ACCATGACTCTCAACATCTC+CGG | - | chr3_4:80693004-80693023 | None:intergenic | 45.0% | |
| CTTGAACCTCATTAGTCCGT+TGG | - | chr3_4:80693114-80693133 | None:intergenic | 45.0% | |
| !! | TCCAAAGATTGAGCTTGCTG+GGG | - | chr3_4:80693260-80693279 | None:intergenic | 45.0% |
| ! | CTCCAAAGATTGAGCTTGCT+GGG | - | chr3_4:80693261-80693280 | None:intergenic | 45.0% |
| ! | CAAGCTCAATCTTTGGAGGA+AGG | + | chr3_4:80693263-80693282 | Msa0526680:CDS | 45.0% |
| ! | TCTTTGGAGGAAGGTTCCAT+TGG | + | chr3_4:80693272-80693291 | Msa0526680:CDS | 45.0% |
| ATGGTTATGTGGAGCTAGCT+AGG | + | chr3_4:80693322-80693341 | Msa0526680:exon | 45.0% | |
| AGCTAGCTAGGATGCATAGA+TGG | + | chr3_4:80693334-80693353 | Msa0526680:exon | 45.0% | |
| !! | AAATAAATATATAAGAATTA+AGG | + | chr3_4:80692126-80692145 | Msa0526680:intron | 5.0% |
| !! | AAATAAATATATAAGAATTA+AGG | + | chr3_4:80692126-80692145 | Msa0526680:intron | 5.0% |
| TACTTCCCATGGCTGCCAAA+GGG | + | chr3_4:80691667-80691686 | Msa0526680:CDS | 50.0% | |
| AAATCCCCTTTGGCAGCCAT+GGG | - | chr3_4:80691675-80691694 | None:intergenic | 50.0% | |
| AAAATCCCCTTTGGCAGCCA+TGG | - | chr3_4:80691676-80691695 | None:intergenic | 50.0% | |
| GAAGAAGTGGAGTGTGGGAA+AGG | + | chr3_4:80691924-80691943 | Msa0526680:CDS | 50.0% | |
| GTGTGGGAAAGGAAACTGTG+TGG | + | chr3_4:80691935-80691954 | Msa0526680:CDS | 50.0% | |
| ACCGGAGATGTTGAGAGTCA+TGG | + | chr3_4:80693000-80693019 | Msa0526680:CDS | 50.0% | |
| TCCCCAGCAAGCTCAATCTT+TGG | + | chr3_4:80693256-80693275 | Msa0526680:intron | 50.0% | |
| CCTCCAAAGATTGAGCTTGC+TGG | - | chr3_4:80693262-80693281 | None:intergenic | 50.0% | |
| CCAGCAAGCTCAATCTTTGG+AGG | + | chr3_4:80693259-80693278 | Msa0526680:intron | 50.0% | |
| TACTTCCCATGGCTGCCAAA+GGG | + | chr3_4:80691667-80691686 | Msa0526680:CDS | 50.0% | |
| AAATCCCCTTTGGCAGCCAT+GGG | - | chr3_4:80691675-80691694 | None:intergenic | 50.0% | |
| AAAATCCCCTTTGGCAGCCA+TGG | - | chr3_4:80691676-80691695 | None:intergenic | 50.0% | |
| GAAGAAGTGGAGTGTGGGAA+AGG | + | chr3_4:80691924-80691943 | Msa0526680:CDS | 50.0% | |
| GTGTGGGAAAGGAAACTGTG+TGG | + | chr3_4:80691935-80691954 | Msa0526680:CDS | 50.0% | |
| ACCGGAGATGTTGAGAGTCA+TGG | + | chr3_4:80693000-80693019 | Msa0526680:CDS | 50.0% | |
| TCCCCAGCAAGCTCAATCTT+TGG | + | chr3_4:80693256-80693275 | Msa0526680:intron | 50.0% | |
| CCTCCAAAGATTGAGCTTGC+TGG | - | chr3_4:80693262-80693281 | None:intergenic | 50.0% | |
| CCAGCAAGCTCAATCTTTGG+AGG | + | chr3_4:80693259-80693278 | Msa0526680:intron | 50.0% | |
| CTACTTCCCATGGCTGCCAA+AGG | + | chr3_4:80691666-80691685 | Msa0526680:CDS | 55.0% | |
| ACTTCCCATGGCTGCCAAAG+GGG | + | chr3_4:80691668-80691687 | Msa0526680:CDS | 55.0% | |
| !! | GTCTTCTCTGGAACTGGAGG+AGG | - | chr3_4:80692260-80692279 | None:intergenic | 55.0% |
| CTACTTCCCATGGCTGCCAA+AGG | + | chr3_4:80691666-80691685 | Msa0526680:CDS | 55.0% | |
| ACTTCCCATGGCTGCCAAAG+GGG | + | chr3_4:80691668-80691687 | Msa0526680:CDS | 55.0% | |
| !! | GTCTTCTCTGGAACTGGAGG+AGG | - | chr3_4:80692260-80692279 | None:intergenic | 55.0% |
| !! | GAACTGGAGGAGGTGCTGGT+TGG | - | chr3_4:80692250-80692269 | None:intergenic | 60.0% |
| ! | TCTGGAACTGGAGGAGGTGC+TGG | - | chr3_4:80692254-80692273 | None:intergenic | 60.0% |
| !! | GAACTGGAGGAGGTGCTGGT+TGG | - | chr3_4:80692250-80692269 | None:intergenic | 60.0% |
| ! | TCTGGAACTGGAGGAGGTGC+TGG | - | chr3_4:80692254-80692273 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 80691547 | 80693654 | 80691547 | ID=Msa0526680;Name=Msa0526680 |
| chr3_4 | mRNA | 80691547 | 80693654 | 80691547 | ID=Msa0526680-mRNA-1;Parent=Msa0526680;Name=Msa0526680-mRNA-1;_AED=0.19;_eAED=0.19;_QI=71|0.66|1|1|0.33|0.75|4|315|134 |
| chr3_4 | exon | 80691547 | 80691711 | 80691547 | ID=Msa0526680-mRNA-1:exon:24274;Parent=Msa0526680-mRNA-1 |
| chr3_4 | exon | 80691913 | 80692074 | 80691913 | ID=Msa0526680-mRNA-1:exon:24275;Parent=Msa0526680-mRNA-1 |
| chr3_4 | exon | 80692950 | 80693021 | 80692950 | ID=Msa0526680-mRNA-1:exon:24276;Parent=Msa0526680-mRNA-1 |
| chr3_4 | exon | 80693263 | 80693654 | 80693263 | ID=Msa0526680-mRNA-1:exon:24277;Parent=Msa0526680-mRNA-1 |
| chr3_4 | five_prime_UTR | 80691547 | 80691617 | 80691547 | ID=Msa0526680-mRNA-1:five_prime_utr;Parent=Msa0526680-mRNA-1 |
| chr3_4 | CDS | 80691618 | 80691711 | 80691618 | ID=Msa0526680-mRNA-1:cds;Parent=Msa0526680-mRNA-1 |
| chr3_4 | CDS | 80691913 | 80692074 | 80691913 | ID=Msa0526680-mRNA-1:cds;Parent=Msa0526680-mRNA-1 |
| chr3_4 | CDS | 80692950 | 80693021 | 80692950 | ID=Msa0526680-mRNA-1:cds;Parent=Msa0526680-mRNA-1 |
| chr3_4 | CDS | 80693263 | 80693339 | 80693263 | ID=Msa0526680-mRNA-1:cds;Parent=Msa0526680-mRNA-1 |
| chr3_4 | three_prime_UTR | 80693340 | 80693654 | 80693340 | ID=Msa0526680-mRNA-1:three_prime_utr;Parent=Msa0526680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
