Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235000 | XP_003593732.1 | 97.500 | 80 | 2 | 0 | 1 | 80 | 1 | 80 | 9.99e-46 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235000 | sp|O82275|TAX1_ARATH | 73.684 | 76 | 18 | 1 | 5 | 80 | 2 | 75 | 5.17e-26 | 94.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235000 | G7IKA1 | 97.500 | 80 | 2 | 0 | 1 | 80 | 1 | 80 | 4.77e-46 | 151 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021240 | Msa0235000 | -0.802164 | 6.389304e-49 | -8.615850e-47 |
| Msa0021400 | Msa0235000 | 0.818826 | 1.600689e-52 | -8.615850e-47 |
| Msa0027020 | Msa0235000 | -0.803076 | 4.141631e-49 | -8.615850e-47 |
| Msa0030760 | Msa0235000 | -0.810172 | 1.315648e-50 | -8.615850e-47 |
| Msa0033190 | Msa0235000 | -0.800770 | 1.233230e-48 | -8.615850e-47 |
| Msa0036560 | Msa0235000 | -0.802789 | 4.748264e-49 | -8.615850e-47 |
| Msa0039890 | Msa0235000 | 0.801123 | 1.044624e-48 | -8.615850e-47 |
| Msa0042520 | Msa0235000 | -0.817958 | 2.517235e-52 | -8.615850e-47 |
| Msa0052780 | Msa0235000 | 0.819165 | 1.340319e-52 | -8.615850e-47 |
| Msa0074860 | Msa0235000 | -0.814644 | 1.386994e-51 | -8.615850e-47 |
| Msa0075990 | Msa0235000 | -0.802356 | 5.832513e-49 | -8.615850e-47 |
| Msa0078160 | Msa0235000 | -0.817287 | 3.565569e-52 | -8.615850e-47 |
| Msa0079840 | Msa0235000 | -0.801073 | 1.069639e-48 | -8.615850e-47 |
| Msa0097470 | Msa0235000 | -0.818719 | 1.692618e-52 | -8.615850e-47 |
| Msa0097570 | Msa0235000 | 0.812427 | 4.263620e-51 | -8.615850e-47 |
| Msa0110240 | Msa0235000 | 0.801437 | 9.008025e-49 | -8.615850e-47 |
| Msa0118700 | Msa0235000 | -0.800847 | 1.189350e-48 | -8.615850e-47 |
| Msa0127220 | Msa0235000 | -0.818721 | 1.691118e-52 | -8.615850e-47 |
| Msa0127350 | Msa0235000 | -0.806695 | 7.261686e-50 | -8.615850e-47 |
| Msa0127910 | Msa0235000 | -0.815068 | 1.116921e-51 | -8.615850e-47 |
| Msa0134270 | Msa0235000 | 0.813566 | 2.398931e-51 | -8.615850e-47 |
| Msa0138340 | Msa0235000 | -0.804532 | 2.064863e-49 | -8.615850e-47 |
| Msa0141410 | Msa0235000 | 0.803011 | 4.273174e-49 | -8.615850e-47 |
| Msa0145990 | Msa0235000 | -0.803895 | 2.801522e-49 | -8.615850e-47 |
| Msa0147960 | Msa0235000 | -0.804182 | 2.442769e-49 | -8.615850e-47 |
| Msa0164560 | Msa0235000 | 0.802805 | 4.713256e-49 | -8.615850e-47 |
| Msa0164580 | Msa0235000 | -0.801379 | 9.256875e-49 | -8.615850e-47 |
| Msa0167160 | Msa0235000 | -0.803640 | 3.165168e-49 | -8.615850e-47 |
| Msa0170690 | Msa0235000 | -0.800108 | 1.682572e-48 | -8.615850e-47 |
| Msa0172310 | Msa0235000 | -0.800166 | 1.636924e-48 | -8.615850e-47 |
| Msa0180820 | Msa0235000 | 0.805206 | 1.492830e-49 | -8.615850e-47 |
| Msa0183960 | Msa0235000 | -0.822490 | 2.303865e-53 | -8.615850e-47 |
| Msa0186400 | Msa0235000 | -0.813842 | 2.086250e-51 | -8.615850e-47 |
| Msa0192870 | Msa0235000 | 0.808413 | 3.135901e-50 | -8.615850e-47 |
| Msa0195810 | Msa0235000 | -0.804729 | 1.877957e-49 | -8.615850e-47 |
| Msa0196280 | Msa0235000 | 0.801978 | 6.976621e-49 | -8.615850e-47 |
| Msa0197170 | Msa0235000 | 0.812866 | 3.417187e-51 | -8.615850e-47 |
| Msa0219720 | Msa0235000 | -0.810384 | 1.183932e-50 | -8.615850e-47 |
| Msa0227970 | Msa0235000 | -0.807772 | 4.293725e-50 | -8.615850e-47 |
| Msa0232170 | Msa0235000 | -0.810395 | 1.177658e-50 | -8.615850e-47 |
| Msa0235000 | Msa0236690 | -0.802731 | 4.880912e-49 | -8.615850e-47 |
| Msa0235000 | Msa0238140 | 0.836232 | 1.055875e-56 | -8.615850e-47 |
| Msa0235000 | Msa0246140 | 0.829150 | 6.046337e-55 | -8.615850e-47 |
| Msa0235000 | Msa0253230 | -0.805163 | 1.524054e-49 | -8.615850e-47 |
| Msa0235000 | Msa0259770 | -0.803725 | 3.038751e-49 | -8.615850e-47 |
| Msa0235000 | Msa0261020 | -0.802986 | 4.323575e-49 | -8.615850e-47 |
| Msa0235000 | Msa0267700 | 0.816242 | 6.116133e-52 | -8.615850e-47 |
| Msa0235000 | Msa0269660 | -0.805353 | 1.390738e-49 | -8.615850e-47 |
| Msa0235000 | Msa0269710 | 0.807903 | 4.025922e-50 | -8.615850e-47 |
| Msa0235000 | Msa0270730 | -0.806374 | 8.484789e-50 | -8.615850e-47 |
| Msa0235000 | Msa0273400 | 0.903117 | 4.828309e-79 | -8.615850e-47 |
| Msa0235000 | Msa0285420 | 0.803998 | 2.667817e-49 | -8.615850e-47 |
| Msa0235000 | Msa0294200 | 0.805764 | 1.140472e-49 | -8.615850e-47 |
| Msa0235000 | Msa0303900 | 0.828749 | 7.563735e-55 | -8.615850e-47 |
| Msa0235000 | Msa0310270 | -0.800473 | 1.417674e-48 | -8.615850e-47 |
| Msa0235000 | Msa0313660 | 0.895894 | 6.210551e-76 | -8.615850e-47 |
| Msa0235000 | Msa0314680 | -0.829518 | 4.922043e-55 | -8.615850e-47 |
| Msa0235000 | Msa0324810 | 0.818961 | 1.491452e-52 | -8.615850e-47 |
| Msa0235000 | Msa0333770 | 0.806634 | 7.479777e-50 | -8.615850e-47 |
| Msa0235000 | Msa0336550 | -0.811790 | 5.870238e-51 | -8.615850e-47 |
| Msa0235000 | Msa0340370 | 0.817317 | 3.510234e-52 | -8.615850e-47 |
| Msa0235000 | Msa0340700 | -0.805182 | 1.510080e-49 | -8.615850e-47 |
| Msa0235000 | Msa0353010 | 0.801138 | 1.036990e-48 | -8.615850e-47 |
| Msa0235000 | Msa0364030 | -0.816257 | 6.070231e-52 | -8.615850e-47 |
| Msa0235000 | Msa0368620 | 0.821319 | 4.300543e-53 | -8.615850e-47 |
| Msa0235000 | Msa0389710 | 0.821216 | 4.543691e-53 | -8.615850e-47 |
| Msa0235000 | Msa0390590 | -0.817416 | 3.335929e-52 | -8.615850e-47 |
| Msa0235000 | Msa0403740 | -0.815325 | 9.795051e-52 | -8.615850e-47 |
| Msa0235000 | Msa0405200 | 0.843626 | 1.248243e-58 | -8.615850e-47 |
| Msa0235000 | Msa0413050 | -0.802889 | 4.527621e-49 | -8.615850e-47 |
| Msa0235000 | Msa0415760 | -0.801562 | 8.490315e-49 | -8.615850e-47 |
| Msa0235000 | Msa0417060 | 0.801696 | 7.971005e-49 | -8.615850e-47 |
| Msa0235000 | Msa0421690 | 0.801139 | 1.036608e-48 | -8.615850e-47 |
| Msa0235000 | Msa0428300 | -0.803610 | 3.210760e-49 | -8.615850e-47 |
| Msa0235000 | Msa0428720 | -0.817257 | 3.622759e-52 | -8.615850e-47 |
| Msa0235000 | Msa0433050 | 0.849912 | 2.383760e-60 | -8.615850e-47 |
| Msa0235000 | Msa0433090 | 0.812929 | 3.311201e-51 | -8.615850e-47 |
| Msa0235000 | Msa0449500 | 0.839155 | 1.875905e-57 | -8.615850e-47 |
| Msa0235000 | Msa0450890 | -0.808242 | 3.410585e-50 | -8.615850e-47 |
| Msa0235000 | Msa0456450 | -0.809216 | 2.110938e-50 | -8.615850e-47 |
| Msa0235000 | Msa0459930 | 0.818575 | 1.824499e-52 | -8.615850e-47 |
| Msa0235000 | Msa0460510 | -0.806959 | 6.385880e-50 | -8.615850e-47 |
| Msa0235000 | Msa0469770 | -0.816350 | 5.787173e-52 | -8.615850e-47 |
| Msa0235000 | Msa0471130 | -0.802610 | 5.170837e-49 | -8.615850e-47 |
| Msa0235000 | Msa0474290 | -0.807228 | 5.601249e-50 | -8.615850e-47 |
| Msa0235000 | Msa0480260 | 0.817948 | 2.530708e-52 | -8.615850e-47 |
| Msa0235000 | Msa0497680 | 0.829642 | 4.591924e-55 | -8.615850e-47 |
| Msa0235000 | Msa0506370 | 0.805099 | 1.571670e-49 | -8.615850e-47 |
| Msa0235000 | Msa0508160 | 0.815280 | 1.002543e-51 | -8.615850e-47 |
| Msa0235000 | Msa0511380 | 0.802121 | 6.519890e-49 | -8.615850e-47 |
| Msa0235000 | Msa0518720 | -0.805011 | 1.639702e-49 | -8.615850e-47 |
| Msa0235000 | Msa0519070 | -0.800872 | 1.175538e-48 | -8.615850e-47 |
| Msa0235000 | Msa0524670 | 0.844160 | 8.976967e-59 | -8.615850e-47 |
| Msa0235000 | Msa0527210 | -0.804610 | 1.989209e-49 | -8.615850e-47 |
| Msa0235000 | Msa0529110 | 0.825547 | 4.416055e-54 | -8.615850e-47 |
| Msa0235000 | Msa0537340 | 0.801780 | 7.660467e-49 | -8.615850e-47 |
| Msa0235000 | Msa0538050 | -0.805428 | 1.341605e-49 | -8.615850e-47 |
| Msa0235000 | Msa0547370 | 0.800390 | 1.473911e-48 | -8.615850e-47 |
| Msa0235000 | Msa0548420 | 0.821999 | 2.995492e-53 | -8.615850e-47 |
| Msa0235000 | Msa0550820 | -0.801461 | 8.905066e-49 | -8.615850e-47 |
| Msa0235000 | Msa0550980 | -0.802083 | 6.636844e-49 | -8.615850e-47 |
| Msa0235000 | Msa0556760 | -0.800894 | 1.163278e-48 | -8.615850e-47 |
| Msa0235000 | Msa0557440 | -0.802003 | 6.895933e-49 | -8.615850e-47 |
| Msa0235000 | Msa0558010 | -0.832552 | 8.855138e-56 | -8.615850e-47 |
| Msa0235000 | Msa0559640 | -0.807530 | 4.831774e-50 | -8.615850e-47 |
| Msa0235000 | Msa0560280 | 0.808717 | 2.699916e-50 | -8.615850e-47 |
| Msa0235000 | Msa0565180 | 0.816831 | 4.514181e-52 | -8.615850e-47 |
| Msa0235000 | Msa0565370 | -0.809464 | 1.868192e-50 | -8.615850e-47 |
| Msa0235000 | Msa0565430 | -0.810876 | 9.269694e-51 | -8.615850e-47 |
| Msa0235000 | Msa0567190 | -0.803682 | 3.103009e-49 | -8.615850e-47 |
| Msa0235000 | Msa0569540 | -0.813036 | 3.136697e-51 | -8.615850e-47 |
| Msa0235000 | Msa0569580 | -0.803889 | 2.810711e-49 | -8.615850e-47 |
| Msa0235000 | Msa0572730 | -0.817586 | 3.054205e-52 | -8.615850e-47 |
| Msa0235000 | Msa0573940 | -0.819350 | 1.216145e-52 | -8.615850e-47 |
| Msa0235000 | Msa0576480 | -0.801640 | 8.184884e-49 | -8.615850e-47 |
| Msa0235000 | Msa0579520 | 0.800102 | 1.686771e-48 | -8.615850e-47 |
| Msa0235000 | Msa0580410 | -0.814875 | 1.232633e-51 | -8.615850e-47 |
| Msa0235000 | Msa0580890 | -0.812120 | 4.974732e-51 | -8.615850e-47 |
| Msa0235000 | Msa0581350 | 0.837785 | 4.233524e-57 | -8.615850e-47 |
| Msa0235000 | Msa0583270 | -0.807478 | 4.956719e-50 | -8.615850e-47 |
| Msa0235000 | Msa0585720 | -0.807315 | 5.367483e-50 | -8.615850e-47 |
| Msa0235000 | Msa0588040 | 0.802811 | 4.699305e-49 | -8.615850e-47 |
| Msa0235000 | Msa0590620 | -0.818272 | 2.136883e-52 | -8.615850e-47 |
| Msa0235000 | Msa0595270 | 0.823613 | 1.260540e-53 | -8.615850e-47 |
| Msa0235000 | Msa0603310 | 0.814568 | 1.442146e-51 | -8.615850e-47 |
| Msa0235000 | Msa0605150 | -0.811233 | 7.756183e-51 | -8.615850e-47 |
| Msa0235000 | Msa0606260 | -0.800853 | 1.186070e-48 | -8.615850e-47 |
| Msa0235000 | Msa0615070 | 0.804678 | 1.924944e-49 | -8.615850e-47 |
| Msa0235000 | Msa0619450 | -0.807460 | 5.001603e-50 | -8.615850e-47 |
| Msa0235000 | Msa0622800 | -0.812685 | 3.743556e-51 | -8.615850e-47 |
| Msa0235000 | Msa0625900 | -0.812038 | 5.182664e-51 | -8.615850e-47 |
| Msa0235000 | Msa0626920 | 0.806284 | 8.865775e-50 | -8.615850e-47 |
| Msa0235000 | Msa0638300 | -0.801813 | 7.543132e-49 | -8.615850e-47 |
| Msa0235000 | Msa0644340 | 0.822491 | 2.302295e-53 | -8.615850e-47 |
| Msa0235000 | Msa0650550 | 0.811132 | 8.157645e-51 | -8.615850e-47 |
| Msa0235000 | Msa0654500 | -0.816232 | 6.150473e-52 | -8.615850e-47 |
| Msa0235000 | Msa0656570 | -0.808142 | 3.581002e-50 | -8.615850e-47 |
| Msa0235000 | Msa0657340 | 0.810774 | 9.750279e-51 | -8.615850e-47 |
| Msa0235000 | Msa0659230 | 0.802700 | 4.953622e-49 | -8.615850e-47 |
| Msa0235000 | Msa0659580 | -0.807707 | 4.431037e-50 | -8.615850e-47 |
| Msa0235000 | Msa0663580 | -0.803077 | 4.140375e-49 | -8.615850e-47 |
| Msa0235000 | Msa0663690 | -0.813227 | 2.848036e-51 | -8.615850e-47 |
| Msa0235000 | Msa0672090 | 0.812783 | 3.563062e-51 | -8.615850e-47 |
| Msa0235000 | Msa0680460 | 0.800274 | 1.556367e-48 | -8.615850e-47 |
| Msa0235000 | Msa0682910 | 0.817022 | 4.090492e-52 | -8.615850e-47 |
| Msa0235000 | Msa0683200 | -0.818292 | 2.115703e-52 | -8.615850e-47 |
| Msa0235000 | Msa0685810 | -0.812371 | 4.385339e-51 | -8.615850e-47 |
| Msa0235000 | Msa0685860 | -0.809789 | 1.590774e-50 | -8.615850e-47 |
| Msa0235000 | Msa0695250 | -0.801976 | 6.983795e-49 | -8.615850e-47 |
| Msa0235000 | Msa0701430 | 0.815726 | 7.976882e-52 | -8.615850e-47 |
| Msa0235000 | Msa0707860 | -0.812702 | 3.711846e-51 | -8.615850e-47 |
| Msa0235000 | Msa0708840 | -0.812355 | 4.419355e-51 | -8.615850e-47 |
| Msa0235000 | Msa0714230 | -0.839121 | 1.915005e-57 | -8.615850e-47 |
| Msa0235000 | Msa0717540 | -0.800735 | 1.253700e-48 | -8.615850e-47 |
| Msa0235000 | Msa0727230 | 0.805888 | 1.074160e-49 | -8.615850e-47 |
| Msa0235000 | Msa0742690 | -0.810743 | 9.905394e-51 | -8.615850e-47 |
| Msa0235000 | Msa0743370 | 0.837854 | 4.066336e-57 | -8.615850e-47 |
| Msa0235000 | Msa0751510 | 0.801618 | 8.269029e-49 | -8.615850e-47 |
| Msa0235000 | Msa0754020 | -0.810397 | 1.176524e-50 | -8.615850e-47 |
| Msa0235000 | Msa0758880 | -0.815142 | 1.075864e-51 | -8.615850e-47 |
| Msa0235000 | Msa0760160 | -0.803854 | 2.856979e-49 | -8.615850e-47 |
| Msa0235000 | Msa0772160 | -0.809916 | 1.493706e-50 | -8.615850e-47 |
| Msa0235000 | Msa0777600 | 0.806891 | 6.598948e-50 | -8.615850e-47 |
| Msa0235000 | Msa0795320 | 0.820922 | 5.310248e-53 | -8.615850e-47 |
| Msa0235000 | Msa0795910 | -0.814041 | 1.884990e-51 | -8.615850e-47 |
| Msa0235000 | Msa0801320 | -0.803765 | 2.981919e-49 | -8.615850e-47 |
| Msa0235000 | Msa0801630 | -0.807306 | 5.391572e-50 | -8.615850e-47 |
| Msa0235000 | Msa0801920 | -0.817720 | 2.848316e-52 | -8.615850e-47 |
| Msa0235000 | Msa0807100 | -0.806789 | 6.936831e-50 | -8.615850e-47 |
| Msa0235000 | Msa0814660 | 0.818684 | 1.723833e-52 | -8.615850e-47 |
| Msa0235000 | Msa0820130 | -0.803115 | 4.066307e-49 | -8.615850e-47 |
| Msa0235000 | Msa0826240 | 0.803168 | 3.965858e-49 | -8.615850e-47 |
| Msa0235000 | Msa0827560 | -0.801751 | 7.767325e-49 | -8.615850e-47 |
| Msa0235000 | Msa0829250 | -0.819034 | 1.435208e-52 | -8.615850e-47 |
| Msa0235000 | Msa0829990 | 0.829981 | 3.797212e-55 | -8.615850e-47 |
| Msa0235000 | Msa0833030 | -0.807945 | 3.945410e-50 | -8.615850e-47 |
| Msa0235000 | Msa0833360 | -0.813464 | 2.525475e-51 | -8.615850e-47 |
| Msa0235000 | Msa0838120 | -0.816945 | 4.256636e-52 | -8.615850e-47 |
| Msa0235000 | Msa0844870 | -0.802597 | 5.201156e-49 | -8.615850e-47 |
| Msa0235000 | Msa0844970 | -0.809082 | 2.255731e-50 | -8.615850e-47 |
| Msa0235000 | Msa0847140 | 0.803282 | 3.756139e-49 | -8.615850e-47 |
| Msa0235000 | Msa0855260 | 0.838371 | 2.992347e-57 | -8.615850e-47 |
| Msa0235000 | Msa0860630 | -0.802879 | 4.549067e-49 | -8.615850e-47 |
| Msa0235000 | Msa0861400 | -0.810099 | 1.364321e-50 | -8.615850e-47 |
| Msa0235000 | Msa0865830 | 0.811798 | 5.845963e-51 | -8.615850e-47 |
| Msa0235000 | Msa0871790 | -0.818607 | 1.794271e-52 | -8.615850e-47 |
| Msa0235000 | Msa0873880 | 0.805701 | 1.175413e-49 | -8.615850e-47 |
| Msa0235000 | Msa0873910 | 0.810004 | 1.430066e-50 | -8.615850e-47 |
| Msa0235000 | Msa0882360 | 0.813291 | 2.757060e-51 | -8.615850e-47 |
| Msa0235000 | Msa0883880 | -0.803577 | 3.262576e-49 | -8.615850e-47 |
| Msa0235000 | Msa0901270 | 0.805975 | 1.029637e-49 | -8.615850e-47 |
| Msa0235000 | Msa0906680 | 0.811097 | 8.301500e-51 | -8.615850e-47 |
| Msa0235000 | Msa0911440 | -0.809682 | 1.676910e-50 | -8.615850e-47 |
| Msa0235000 | Msa0911490 | -0.822993 | 1.759087e-53 | -8.615850e-47 |
| Msa0235000 | Msa0937160 | -0.813846 | 2.081957e-51 | -8.615850e-47 |
| Msa0235000 | Msa0947420 | 0.839039 | 2.010529e-57 | -8.615850e-47 |
| Msa0235000 | Msa0975950 | 0.813049 | 3.115100e-51 | -8.615850e-47 |
| Msa0235000 | Msa0982340 | 0.802317 | 5.942766e-49 | -8.615850e-47 |
| Msa0235000 | Msa0985980 | -0.826888 | 2.118308e-54 | -8.615850e-47 |
| Msa0235000 | Msa1001120 | 0.817664 | 2.932828e-52 | -8.615850e-47 |
| Msa0235000 | Msa1004300 | -0.811741 | 6.014463e-51 | -8.615850e-47 |
| Msa0235000 | Msa1016580 | -0.812075 | 5.088286e-51 | -8.615850e-47 |
| Msa0235000 | Msa1020160 | -0.805401 | 1.358710e-49 | -8.615850e-47 |
| Msa0235000 | Msa1026970 | 0.802246 | 6.143466e-49 | -8.615850e-47 |
| Msa0235000 | Msa1034690 | 0.800825 | 1.201881e-48 | -8.615850e-47 |
| Msa0235000 | Msa1041250 | 0.804516 | 2.080835e-49 | -8.615850e-47 |
| Msa0235000 | Msa1044050 | -0.807334 | 5.318321e-50 | -8.615850e-47 |
| Msa0235000 | Msa1047300 | 0.801858 | 7.383915e-49 | -8.615850e-47 |
| Msa0235000 | Msa1047340 | 0.802088 | 6.620912e-49 | -8.615850e-47 |
| Msa0235000 | Msa1057940 | -0.811676 | 6.215998e-51 | -8.615850e-47 |
| Msa0235000 | Msa1062060 | 0.817503 | 3.188844e-52 | -8.615850e-47 |
| Msa0235000 | Msa1074550 | 0.817965 | 2.508076e-52 | -8.615850e-47 |
| Msa0235000 | Msa1075090 | 0.807317 | 5.361315e-50 | -8.615850e-47 |
| Msa0235000 | Msa1078210 | -0.807104 | 5.950701e-50 | -8.615850e-47 |
| Msa0235000 | Msa1085820 | 0.814832 | 1.259965e-51 | -8.615850e-47 |
| Msa0235000 | Msa1085860 | 0.826446 | 2.701409e-54 | -8.615850e-47 |
| Msa0235000 | Msa1089990 | 0.815139 | 1.077598e-51 | -8.615850e-47 |
| Msa0235000 | Msa1094810 | 0.829738 | 4.350442e-55 | -8.615850e-47 |
| Msa0235000 | Msa1102410 | -0.807707 | 4.431205e-50 | -8.615850e-47 |
| Msa0235000 | Msa1107220 | 0.860971 | 1.423830e-63 | -8.615850e-47 |
| Msa0235000 | Msa1107250 | 0.842161 | 3.062743e-58 | -8.615850e-47 |
| Msa0235000 | Msa1112210 | -0.810613 | 1.056398e-50 | -8.615850e-47 |
| Msa0235000 | Msa1115980 | 0.801817 | 7.527254e-49 | -8.615850e-47 |
| Msa0235000 | Msa1121720 | -0.820508 | 6.608975e-53 | -8.615850e-47 |
| Msa0235000 | Msa1123440 | -0.802468 | 5.532099e-49 | -8.615850e-47 |
| Msa0235000 | Msa1131070 | 0.809839 | 1.552023e-50 | -8.615850e-47 |
| Msa0235000 | Msa1132880 | -0.814360 | 1.602938e-51 | -8.615850e-47 |
| Msa0235000 | Msa1137750 | 0.809721 | 1.644800e-50 | -8.615850e-47 |
| Msa0235000 | Msa1150740 | 0.817168 | 3.792798e-52 | -8.615850e-47 |
| Msa0235000 | Msa1150760 | 0.846292 | 2.380984e-59 | -8.615850e-47 |
| Msa0235000 | Msa1156120 | -0.800957 | 1.129279e-48 | -8.615850e-47 |
| Msa0235000 | Msa1157200 | 0.832270 | 1.040569e-55 | -8.615850e-47 |
| Msa0235000 | Msa1162050 | 0.811766 | 5.941960e-51 | -8.615850e-47 |
| Msa0235000 | Msa1162430 | 0.817488 | 3.213098e-52 | -8.615850e-47 |
| Msa0235000 | Msa1173150 | 0.811180 | 7.962438e-51 | -8.615850e-47 |
| Msa0235000 | Msa1174280 | 0.814005 | 1.920060e-51 | -8.615850e-47 |
| Msa0235000 | Msa1177650 | 0.814608 | 1.413099e-51 | -8.615850e-47 |
| Msa0235000 | Msa1182530 | -0.806375 | 8.479293e-50 | -8.615850e-47 |
| Msa0235000 | Msa1185270 | 0.805307 | 1.421852e-49 | -8.615850e-47 |
| Msa0235000 | Msa1187160 | 0.811859 | 5.669533e-51 | -8.615850e-47 |
| Msa0235000 | Msa1191530 | -0.821135 | 4.742407e-53 | -8.615850e-47 |
| Msa0235000 | Msa1199540 | -0.823876 | 1.093786e-53 | -8.615850e-47 |
| Msa0235000 | Msa1200060 | -0.801683 | 8.021538e-49 | -8.615850e-47 |
| Msa0235000 | Msa1202110 | 0.842915 | 1.931807e-58 | -8.615850e-47 |
| Msa0235000 | Msa1202710 | -0.818719 | 1.692618e-52 | -8.615850e-47 |
| Msa0235000 | Msa1204870 | -0.800352 | 1.500471e-48 | -8.615850e-47 |
| Msa0235000 | Msa1204900 | -0.811370 | 7.242854e-51 | -8.615850e-47 |
| Msa0235000 | Msa1213180 | -0.807272 | 5.480443e-50 | -8.615850e-47 |
| Msa0235000 | Msa1220850 | 0.804775 | 1.837140e-49 | -8.615850e-47 |
| Msa0235000 | Msa1221270 | 0.844107 | 9.280138e-59 | -8.615850e-47 |
| Msa0235000 | Msa1223710 | 0.834356 | 3.143577e-56 | -8.615850e-47 |
| Msa0235000 | Msa1228600 | -0.802716 | 4.916502e-49 | -8.615850e-47 |
| Msa0235000 | Msa1239190 | 0.819650 | 1.038847e-52 | -8.615850e-47 |
| Msa0235000 | Msa1239210 | 0.812634 | 3.841634e-51 | -8.615850e-47 |
| Msa0235000 | Msa1244430 | -0.807407 | 5.131874e-50 | -8.615850e-47 |
| Msa0235000 | Msa1251500 | 0.813790 | 2.141307e-51 | -8.615850e-47 |
| Msa0235000 | Msa1254870 | 0.844330 | 8.084134e-59 | -8.615850e-47 |
| Msa0235000 | Msa1256490 | -0.800121 | 1.671660e-48 | -8.615850e-47 |
| Msa0235000 | Msa1263370 | 0.819508 | 1.119716e-52 | -8.615850e-47 |
| Msa0235000 | Msa1269200 | 0.804638 | 1.962055e-49 | -8.615850e-47 |
| Msa0235000 | Msa1270860 | -0.807585 | 4.704095e-50 | -8.615850e-47 |
| Msa0235000 | Msa1278080 | -0.803849 | 2.864521e-49 | -8.615850e-47 |
| Msa0235000 | Msa1279200 | -0.820516 | 6.581430e-53 | -8.615850e-47 |
| Msa0235000 | Msa1284020 | 0.802140 | 6.462543e-49 | -8.615850e-47 |
| Msa0235000 | Msa1290090 | -0.800951 | 1.132669e-48 | -8.615850e-47 |
| Msa0235000 | Msa1292140 | 0.821435 | 4.043624e-53 | -8.615850e-47 |
| Msa0235000 | Msa1296810 | -0.808552 | 2.928306e-50 | -8.615850e-47 |
| Msa0235000 | Msa1302630 | 0.820527 | 6.543126e-53 | -8.615850e-47 |
| Msa0235000 | Msa1317740 | 0.810910 | 9.113709e-51 | -8.615850e-47 |
| Msa0235000 | Msa1326780 | -0.817951 | 2.526554e-52 | -8.615850e-47 |
| Msa0235000 | Msa1328430 | 0.844135 | 9.117128e-59 | -8.615850e-47 |
| Msa0235000 | Msa1328680 | -0.831930 | 1.262202e-55 | -8.615850e-47 |
| Msa0235000 | Msa1329080 | -0.801103 | 1.054352e-48 | -8.615850e-47 |
| Msa0235000 | Msa1331570 | -0.801813 | 7.543757e-49 | -8.615850e-47 |
| Msa0235000 | Msa1341710 | -0.810774 | 9.749477e-51 | -8.615850e-47 |
| Msa0235000 | Msa1342360 | -0.809633 | 1.718587e-50 | -8.615850e-47 |
| Msa0235000 | Msa1342460 | -0.801020 | 1.096276e-48 | -8.615850e-47 |
| Msa0235000 | Msa1345390 | 0.821524 | 3.857440e-53 | -8.615850e-47 |
| Msa0235000 | Msa1350580 | -0.800377 | 1.483351e-48 | -8.615850e-47 |
| Msa0235000 | Msa1350590 | -0.802724 | 4.898675e-49 | -8.615850e-47 |
| Msa0235000 | Msa1356100 | -0.820452 | 6.809956e-53 | -8.615850e-47 |
| Msa0235000 | Msa1357090 | -0.805281 | 1.439877e-49 | -8.615850e-47 |
| Msa0235000 | Msa1360070 | -0.803734 | 3.026659e-49 | -8.615850e-47 |
| Msa0235000 | Msa1362520 | 0.816252 | 6.084768e-52 | -8.615850e-47 |
| Msa0235000 | Msa1364690 | 0.809780 | 1.597467e-50 | -8.615850e-47 |
| Msa0235000 | Msa1371540 | -0.813054 | 3.108576e-51 | -8.615850e-47 |
| Msa0235000 | Msa1375640 | 0.843370 | 1.460621e-58 | -8.615850e-47 |
| Msa0235000 | Msa1375980 | -0.812101 | 5.022776e-51 | -8.615850e-47 |
| Msa0235000 | Msa1376520 | 0.823689 | 1.209651e-53 | -8.615850e-47 |
| Msa0235000 | Msa1377980 | -0.822318 | 2.525828e-53 | -8.615850e-47 |
| Msa0235000 | Msa1379270 | -0.804063 | 2.585917e-49 | -8.615850e-47 |
| Msa0235000 | Msa1382100 | -0.802906 | 4.492200e-49 | -8.615850e-47 |
| Msa0235000 | Msa1386580 | -0.800107 | 1.682664e-48 | -8.615850e-47 |
| Msa0235000 | Msa1388720 | -0.800395 | 1.470257e-48 | -8.615850e-47 |
| Msa0235000 | Msa1395380 | -0.800489 | 1.407121e-48 | -8.615850e-47 |
| Msa0235000 | Msa1398120 | 0.826982 | 2.011965e-54 | -8.615850e-47 |
| Msa0235000 | Msa1398150 | -0.808893 | 2.476188e-50 | -8.615850e-47 |
| Msa0235000 | Msa1403820 | -0.809730 | 1.637858e-50 | -8.615850e-47 |
| Msa0235000 | Msa1405530 | 0.801991 | 6.934153e-49 | -8.615850e-47 |
| Msa0235000 | Msa1408230 | -0.813042 | 3.127612e-51 | -8.615850e-47 |
| Msa0235000 | Msa1408280 | -0.822331 | 2.508685e-53 | -8.615850e-47 |
| Msa0235000 | Msa1408860 | -0.806044 | 9.956939e-50 | -8.615850e-47 |
| Msa0235000 | Msa1412270 | -0.815260 | 1.012695e-51 | -8.615850e-47 |
| Msa0235000 | Msa1414000 | -0.801672 | 8.063293e-49 | -8.615850e-47 |
| Msa0235000 | Msa1415510 | -0.802224 | 6.210593e-49 | -8.615850e-47 |
| Msa0235000 | Msa1424490 | -0.803505 | 3.376436e-49 | -8.615850e-47 |
| Msa0235000 | Msa1429190 | 0.828928 | 6.843878e-55 | -8.615850e-47 |
| Msa0235000 | Msa1434860 | -0.800915 | 1.151834e-48 | -8.615850e-47 |
| Msa0235000 | Msa1439000 | -0.802734 | 4.873754e-49 | -8.615850e-47 |
| Msa0235000 | Msa1450970 | 0.818874 | 1.561010e-52 | -8.615850e-47 |
| Msa0235000 | Msa1451200 | -0.810718 | 1.002552e-50 | -8.615850e-47 |
| Msa0235000 | Msa1453180 | -0.802158 | 6.404982e-49 | -8.615850e-47 |
| Msa0235000 | Msa1454300 | -0.802837 | 4.641621e-49 | -8.615850e-47 |
| Msa0235000 | Msa1459680 | -0.801097 | 1.057519e-48 | -8.615850e-47 |
| Msa0235000 | Msa1459920 | 0.813746 | 2.189330e-51 | -8.615850e-47 |
| Msa0235000 | Msa1459930 | 0.803373 | 3.595325e-49 | -8.615850e-47 |
| Msa0235000 | Msa1461840 | -0.800838 | 1.194474e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235000 | MtrunA17_Chr2g0283451 | 97.500 | 80 | 2 | 0 | 1 | 80 | 1 | 80 | 9.19e-50 | 151 |
| Msa0235000 | MtrunA17_Chr2g0325441 | 73.684 | 76 | 20 | 0 | 5 | 80 | 2 | 77 | 5.02e-35 | 114 |
| Msa0235000 | MtrunA17_Chr4g0040991 | 75.000 | 76 | 19 | 0 | 5 | 80 | 2 | 77 | 7.62e-35 | 113 |
| Msa0235000 | MtrunA17_Chr2g0324911 | 60.811 | 74 | 29 | 0 | 7 | 80 | 5 | 78 | 6.00e-21 | 78.6 |
| Msa0235000 | MtrunA17_Chr4g0040491 | 58.333 | 72 | 30 | 0 | 9 | 80 | 8 | 79 | 9.72e-15 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235000 | AT2G31090.1 | 73.684 | 76 | 18 | 1 | 5 | 80 | 2 | 75 | 5.25e-27 | 94.0 |
| Msa0235000 | AT2G20562.1 | 59.420 | 69 | 28 | 0 | 12 | 80 | 5 | 73 | 7.65e-20 | 75.9 |
Find 26 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGTAGGTGCAGTTATT+TGG | 0.227999 | 2_2:+7742686 | Msa0235000:CDS |
| TCTCTCATAATCTCCTTTGT+AGG | 0.287883 | 2_2:+7742673 | Msa0235000:CDS |
| AACCACTCCATAACCTTAAC+TGG | 0.322726 | 2_2:-7742910 | None:intergenic |
| CACATGGTTAATTACCTAAT+GGG | 0.332162 | 2_2:-7742580 | None:intergenic |
| ACACATGGTTAATTACCTAA+TGG | 0.347508 | 2_2:-7742581 | None:intergenic |
| TTTAAGAACTTCAACCCATT+AGG | 0.359993 | 2_2:+7742566 | None:intergenic |
| GGTGCAGTTATTTGGATTGT+TGG | 0.388294 | 2_2:+7742694 | Msa0235000:CDS |
| GTGCAGTTATTTGGATTGTT+GGG | 0.397665 | 2_2:+7742695 | Msa0235000:CDS |
| CAAGGCTCCAGTTAAGGTTA+TGG | 0.418089 | 2_2:+7742903 | Msa0235000:CDS |
| GTTTGCTCTGGCTCTCATCA+AGG | 0.420977 | 2_2:+7742885 | Msa0235000:CDS |
| CCTCATAGTTGAGTTTGCTC+TGG | 0.438328 | 2_2:+7742873 | Msa0235000:CDS |
| TCTCATCAAGGCTCCAGTTA+AGG | 0.440222 | 2_2:+7742897 | Msa0235000:CDS |
| GATTGTAAATTCAGGCCTCT+TGG | 0.461509 | 2_2:+7742619 | Msa0235000:CDS |
| ATGAGAGACAAGAAAGCAAA+AGG | 0.478563 | 2_2:-7742658 | None:intergenic |
| AGAAAGCAAAAGGAAGGCCT+AGG | 0.499755 | 2_2:-7742648 | None:intergenic |
| TTAACCATGTGTTGCTGTTG+TGG | 0.511293 | 2_2:+7742592 | Msa0235000:exon |
| CCAGAGCAAACTCAACTATG+AGG | 0.515083 | 2_2:-7742873 | None:intergenic |
| GTGGTGAGGATTGTAAATTC+AGG | 0.531054 | 2_2:+7742611 | Msa0235000:CDS |
| CCAAATAACTGCACCTACAA+AGG | 0.535186 | 2_2:-7742686 | None:intergenic |
| CATGTGTTGCTGTTGTGGTG+AGG | 0.609312 | 2_2:+7742597 | Msa0235000:exon |
| GAGACAAGAAAGCAAAAGGA+AGG | 0.614663 | 2_2:-7742654 | None:intergenic |
| AGGGTCACGCAAAGACAGCA+TGG | 0.623057 | 2_2:-7742853 | None:intergenic |
| CAGAGCAAACTCAACTATGA+GGG | 0.623831 | 2_2:-7742872 | None:intergenic |
| CTCACCACAACAGCAACACA+TGG | 0.630485 | 2_2:-7742596 | None:intergenic |
| CTCCAGTTAAGGTTATGGAG+TGG | 0.661349 | 2_2:+7742908 | Msa0235000:CDS |
| AGGCCTAGGAGAAAACCAAG+AGG | 0.747286 | 2_2:-7742634 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAAAATACTAATAGAT+TGG | - | chr2_2:7742737-7742756 | None:intergenic | 15.0% |
| ! | AATGTGTATGATGCTATATA+TGG | + | chr2_2:7742805-7742824 | Msa0235000:intron | 25.0% |
| CACATGGTTAATTACCTAAT+GGG | - | chr2_2:7742583-7742602 | None:intergenic | 30.0% | |
| ACACATGGTTAATTACCTAA+TGG | - | chr2_2:7742584-7742603 | None:intergenic | 30.0% | |
| CTAATAGATTGGAAAAGAGA+GGG | - | chr2_2:7742726-7742745 | None:intergenic | 30.0% | |
| ACTAATAGATTGGAAAAGAG+AGG | - | chr2_2:7742727-7742746 | None:intergenic | 30.0% | |
| ATGAGAGACAAGAAAGCAAA+AGG | - | chr2_2:7742661-7742680 | None:intergenic | 35.0% | |
| TCTCTCATAATCTCCTTTGT+AGG | + | chr2_2:7742673-7742692 | Msa0235000:CDS | 35.0% | |
| GTGCAGTTATTTGGATTGTT+GGG | + | chr2_2:7742695-7742714 | Msa0235000:CDS | 35.0% | |
| TGTATGATGCTATATATGGC+AGG | + | chr2_2:7742809-7742828 | Msa0235000:intron | 35.0% | |
| ! | TTAACCATGTGTTGCTGTTG+TGG | + | chr2_2:7742592-7742611 | Msa0235000:exon | 40.0% |
| GTGGTGAGGATTGTAAATTC+AGG | + | chr2_2:7742611-7742630 | Msa0235000:CDS | 40.0% | |
| GATTGTAAATTCAGGCCTCT+TGG | + | chr2_2:7742619-7742638 | Msa0235000:CDS | 40.0% | |
| GAGACAAGAAAGCAAAAGGA+AGG | - | chr2_2:7742657-7742676 | None:intergenic | 40.0% | |
| CCAAATAACTGCACCTACAA+AGG | - | chr2_2:7742689-7742708 | None:intergenic | 40.0% | |
| CCTTTGTAGGTGCAGTTATT+TGG | + | chr2_2:7742686-7742705 | Msa0235000:CDS | 40.0% | |
| GGTGCAGTTATTTGGATTGT+TGG | + | chr2_2:7742694-7742713 | Msa0235000:CDS | 40.0% | |
| CAGAGCAAACTCAACTATGA+GGG | - | chr2_2:7742875-7742894 | None:intergenic | 40.0% | |
| AACCACTCCATAACCTTAAC+TGG | - | chr2_2:7742913-7742932 | None:intergenic | 40.0% | |
| AGAAAGCAAAAGGAAGGCCT+AGG | - | chr2_2:7742651-7742670 | None:intergenic | 45.0% | |
| CCAGAGCAAACTCAACTATG+AGG | - | chr2_2:7742876-7742895 | None:intergenic | 45.0% | |
| ! | CCTCATAGTTGAGTTTGCTC+TGG | + | chr2_2:7742873-7742892 | Msa0235000:CDS | 45.0% |
| TCTCATCAAGGCTCCAGTTA+AGG | + | chr2_2:7742897-7742916 | Msa0235000:CDS | 45.0% | |
| CAAGGCTCCAGTTAAGGTTA+TGG | + | chr2_2:7742903-7742922 | Msa0235000:CDS | 45.0% | |
| CTCCAGTTAAGGTTATGGAG+TGG | + | chr2_2:7742908-7742927 | Msa0235000:CDS | 45.0% | |
| CTCACCACAACAGCAACACA+TGG | - | chr2_2:7742599-7742618 | None:intergenic | 50.0% | |
| ! | CATGTGTTGCTGTTGTGGTG+AGG | + | chr2_2:7742597-7742616 | Msa0235000:exon | 50.0% |
| !! | AGGCCTCTTGGTTTTCTCCT+AGG | + | chr2_2:7742631-7742650 | Msa0235000:CDS | 50.0% |
| AGGCCTAGGAGAAAACCAAG+AGG | - | chr2_2:7742637-7742656 | None:intergenic | 50.0% | |
| !! | GTTTGCTCTGGCTCTCATCA+AGG | + | chr2_2:7742885-7742904 | Msa0235000:CDS | 50.0% |
| AGGGTCACGCAAAGACAGCA+TGG | - | chr2_2:7742856-7742875 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 7742569 | 7742954 | 7742569 | ID=Msa0235000;Name=Msa0235000 |
| chr2_2 | mRNA | 7742569 | 7742954 | 7742569 | ID=Msa0235000-mRNA-1;Parent=Msa0235000;Name=Msa0235000-mRNA-1;_AED=0.15;_eAED=0.15;_QI=29|1|0.5|1|1|1|2|0|80 |
| chr2_2 | exon | 7742569 | 7742716 | 7742569 | ID=Msa0235000-mRNA-1:exon:3378;Parent=Msa0235000-mRNA-1 |
| chr2_2 | exon | 7742831 | 7742954 | 7742831 | ID=Msa0235000-mRNA-1:exon:3379;Parent=Msa0235000-mRNA-1 |
| chr2_2 | five_prime_UTR | 7742569 | 7742597 | 7742569 | ID=Msa0235000-mRNA-1:five_prime_utr;Parent=Msa0235000-mRNA-1 |
| chr2_2 | CDS | 7742598 | 7742716 | 7742598 | ID=Msa0235000-mRNA-1:cds;Parent=Msa0235000-mRNA-1 |
| chr2_2 | CDS | 7742831 | 7742954 | 7742831 | ID=Msa0235000-mRNA-1:cds;Parent=Msa0235000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
