Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506940 | XP_003600707.2 | 98.974 | 195 | 2 | 0 | 1 | 195 | 23 | 217 | 2.58e-137 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506940 | sp|Q9LQU5|NUD18_ARATH | 68.354 | 158 | 48 | 1 | 10 | 167 | 1 | 156 | 1.84e-73 | 222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506940 | A0A396IVT9 | 98.974 | 195 | 2 | 0 | 1 | 195 | 23 | 217 | 1.23e-137 | 392 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0506940 | -0.839006 | 2.050718e-57 | -8.615850e-47 |
| Msa0006880 | Msa0506940 | 0.814255 | 1.690823e-51 | -8.615850e-47 |
| Msa0010020 | Msa0506940 | 0.801101 | 1.055416e-48 | -8.615850e-47 |
| Msa0015680 | Msa0506940 | 0.807075 | 6.032812e-50 | -8.615850e-47 |
| Msa0027580 | Msa0506940 | 0.816476 | 5.422184e-52 | -8.615850e-47 |
| Msa0030280 | Msa0506940 | 0.807398 | 5.153132e-50 | -8.615850e-47 |
| Msa0032370 | Msa0506940 | 0.854412 | 1.252663e-61 | -8.615850e-47 |
| Msa0055150 | Msa0506940 | 0.810024 | 1.415670e-50 | -8.615850e-47 |
| Msa0057140 | Msa0506940 | 0.800703 | 1.272873e-48 | -8.615850e-47 |
| Msa0075340 | Msa0506940 | 0.816583 | 5.132590e-52 | -8.615850e-47 |
| Msa0090030 | Msa0506940 | 0.846624 | 1.932335e-59 | -8.615850e-47 |
| Msa0094010 | Msa0506940 | 0.849149 | 3.892261e-60 | -8.615850e-47 |
| Msa0094920 | Msa0506940 | 0.801262 | 9.783759e-49 | -8.615850e-47 |
| Msa0095380 | Msa0506940 | 0.817727 | 2.837609e-52 | -8.615850e-47 |
| Msa0097950 | Msa0506940 | 0.809925 | 1.486794e-50 | -8.615850e-47 |
| Msa0099510 | Msa0506940 | 0.819995 | 8.664477e-53 | -8.615850e-47 |
| Msa0100800 | Msa0506940 | 0.826928 | 2.072783e-54 | -8.615850e-47 |
| Msa0101880 | Msa0506940 | 0.805573 | 1.250797e-49 | -8.615850e-47 |
| Msa0104610 | Msa0506940 | 0.828036 | 1.123813e-54 | -8.615850e-47 |
| Msa0131450 | Msa0506940 | 0.806473 | 8.085973e-50 | -8.615850e-47 |
| Msa0135420 | Msa0506940 | 0.804910 | 1.721379e-49 | -8.615850e-47 |
| Msa0145070 | Msa0506940 | 0.809433 | 1.897153e-50 | -8.615850e-47 |
| Msa0145150 | Msa0506940 | 0.800380 | 1.480849e-48 | -8.615850e-47 |
| Msa0145950 | Msa0506940 | 0.811719 | 6.083009e-51 | -8.615850e-47 |
| Msa0155330 | Msa0506940 | 0.804876 | 1.750526e-49 | -8.615850e-47 |
| Msa0156230 | Msa0506940 | 0.800427 | 1.448407e-48 | -8.615850e-47 |
| Msa0165300 | Msa0506940 | 0.804561 | 2.036625e-49 | -8.615850e-47 |
| Msa0172350 | Msa0506940 | 0.841740 | 3.955814e-58 | -8.615850e-47 |
| Msa0181520 | Msa0506940 | 0.816726 | 4.765852e-52 | -8.615850e-47 |
| Msa0185590 | Msa0506940 | 0.946914 | 1.854632e-105 | -8.615850e-47 |
| Msa0198520 | Msa0506940 | 0.834333 | 3.185295e-56 | -8.615850e-47 |
| Msa0198530 | Msa0506940 | 0.831190 | 1.921193e-55 | -8.615850e-47 |
| Msa0208810 | Msa0506940 | 0.843369 | 1.461651e-58 | -8.615850e-47 |
| Msa0211650 | Msa0506940 | 0.819303 | 1.246556e-52 | -8.615850e-47 |
| Msa0212750 | Msa0506940 | -0.827615 | 1.419025e-54 | -8.615850e-47 |
| Msa0222920 | Msa0506940 | 0.804710 | 1.895676e-49 | -8.615850e-47 |
| Msa0223290 | Msa0506940 | 0.802921 | 4.459042e-49 | -8.615850e-47 |
| Msa0227400 | Msa0506940 | 0.814281 | 1.668948e-51 | -8.615850e-47 |
| Msa0236980 | Msa0506940 | 0.802322 | 5.928220e-49 | -8.615850e-47 |
| Msa0377530 | Msa0506940 | 0.856277 | 3.587470e-62 | -8.615850e-47 |
| Msa0392200 | Msa0506940 | 0.800122 | 1.671305e-48 | -8.615850e-47 |
| Msa0393950 | Msa0506940 | 0.815812 | 7.630651e-52 | -8.615850e-47 |
| Msa0394400 | Msa0506940 | 0.800326 | 1.519256e-48 | -8.615850e-47 |
| Msa0403190 | Msa0506940 | 0.823039 | 1.716907e-53 | -8.615850e-47 |
| Msa0410300 | Msa0506940 | 0.803322 | 3.684397e-49 | -8.615850e-47 |
| Msa0413450 | Msa0506940 | 0.817822 | 2.701420e-52 | -8.615850e-47 |
| Msa0415810 | Msa0506940 | 0.945935 | 1.199284e-104 | -8.615850e-47 |
| Msa0420000 | Msa0506940 | 0.801012 | 1.100621e-48 | -8.615850e-47 |
| Msa0426810 | Msa0506940 | 0.850604 | 1.525535e-60 | -8.615850e-47 |
| Msa0431770 | Msa0506940 | 0.822488 | 2.305780e-53 | -8.615850e-47 |
| Msa0449820 | Msa0506940 | 0.825932 | 3.578430e-54 | -8.615850e-47 |
| Msa0460930 | Msa0506940 | 0.885839 | 5.753028e-72 | -8.615850e-47 |
| Msa0461590 | Msa0506940 | 0.828803 | 7.338362e-55 | -8.615850e-47 |
| Msa0465920 | Msa0506940 | 0.832500 | 9.124735e-56 | -8.615850e-47 |
| Msa0465960 | Msa0506940 | 0.831349 | 1.755604e-55 | -8.615850e-47 |
| Msa0469910 | Msa0506940 | -0.824978 | 6.022456e-54 | -8.615850e-47 |
| Msa0473240 | Msa0506940 | 0.807300 | 5.407885e-50 | -8.615850e-47 |
| Msa0239450 | Msa0506940 | 0.804040 | 2.613940e-49 | -8.615850e-47 |
| Msa0239940 | Msa0506940 | 0.805599 | 1.234913e-49 | -8.615850e-47 |
| Msa0242680 | Msa0506940 | 0.819960 | 8.828231e-53 | -8.615850e-47 |
| Msa0242760 | Msa0506940 | 0.829263 | 5.677437e-55 | -8.615850e-47 |
| Msa0245850 | Msa0506940 | 0.832121 | 1.132459e-55 | -8.615850e-47 |
| Msa0251250 | Msa0506940 | 0.840368 | 9.070947e-58 | -8.615850e-47 |
| Msa0252240 | Msa0506940 | 0.803338 | 3.656154e-49 | -8.615850e-47 |
| Msa0259560 | Msa0506940 | 0.814759 | 1.308255e-51 | -8.615850e-47 |
| Msa0267760 | Msa0506940 | 0.829556 | 4.818094e-55 | -8.615850e-47 |
| Msa0267870 | Msa0506940 | 0.815670 | 8.207642e-52 | -8.615850e-47 |
| Msa0275400 | Msa0506940 | -0.824151 | 9.425983e-54 | -8.615850e-47 |
| Msa0288730 | Msa0506940 | 0.824594 | 7.416646e-54 | -8.615850e-47 |
| Msa0291020 | Msa0506940 | 0.819027 | 1.440834e-52 | -8.615850e-47 |
| Msa0291520 | Msa0506940 | 0.818947 | 1.501954e-52 | -8.615850e-47 |
| Msa0295000 | Msa0506940 | -0.801698 | 7.962836e-49 | -8.615850e-47 |
| Msa0302650 | Msa0506940 | 0.807516 | 4.865635e-50 | -8.615850e-47 |
| Msa0304290 | Msa0506940 | 0.811875 | 5.625014e-51 | -8.615850e-47 |
| Msa0304330 | Msa0506940 | 0.814196 | 1.742726e-51 | -8.615850e-47 |
| Msa0305890 | Msa0506940 | 0.803796 | 2.937897e-49 | -8.615850e-47 |
| Msa0308220 | Msa0506940 | 0.805848 | 1.094954e-49 | -8.615850e-47 |
| Msa0315240 | Msa0506940 | 0.814245 | 1.699977e-51 | -8.615850e-47 |
| Msa0321190 | Msa0506940 | 0.801083 | 1.064563e-48 | -8.615850e-47 |
| Msa0340810 | Msa0506940 | 0.801973 | 6.993323e-49 | -8.615850e-47 |
| Msa0346990 | Msa0506940 | 0.804101 | 2.538412e-49 | -8.615850e-47 |
| Msa0355270 | Msa0506940 | 0.800655 | 1.301814e-48 | -8.615850e-47 |
| Msa0505060 | Msa0506940 | 0.804273 | 2.338429e-49 | -8.615850e-47 |
| Msa0505150 | Msa0506940 | 0.804177 | 2.447734e-49 | -8.615850e-47 |
| Msa0506890 | Msa0506940 | 0.897649 | 1.146111e-76 | -8.615850e-47 |
| Msa0506940 | Msa0513440 | 0.842100 | 3.177271e-58 | -8.615850e-47 |
| Msa0506940 | Msa0515640 | 0.802176 | 6.353092e-49 | -8.615850e-47 |
| Msa0506940 | Msa0517490 | 0.856274 | 3.595215e-62 | -8.615850e-47 |
| Msa0506940 | Msa0521880 | 0.806747 | 7.078267e-50 | -8.615850e-47 |
| Msa0506940 | Msa0526710 | 0.826123 | 3.224709e-54 | -8.615850e-47 |
| Msa0506940 | Msa0526890 | 0.805484 | 1.305610e-49 | -8.615850e-47 |
| Msa0506940 | Msa0535030 | 0.813730 | 2.207255e-51 | -8.615850e-47 |
| Msa0506940 | Msa0535060 | 0.810176 | 1.312750e-50 | -8.615850e-47 |
| Msa0506940 | Msa0536790 | 0.819921 | 9.006874e-53 | -8.615850e-47 |
| Msa0506940 | Msa0542160 | 0.864872 | 8.890886e-65 | -8.615850e-47 |
| Msa0506940 | Msa0545060 | 0.836663 | 8.202309e-57 | -8.615850e-47 |
| Msa0506940 | Msa0547400 | 0.816925 | 4.300537e-52 | -8.615850e-47 |
| Msa0506940 | Msa0550570 | 0.801938 | 7.108030e-49 | -8.615850e-47 |
| Msa0506940 | Msa0561430 | 0.811345 | 7.332733e-51 | -8.615850e-47 |
| Msa0506940 | Msa0562490 | 0.814033 | 1.892738e-51 | -8.615850e-47 |
| Msa0506940 | Msa0576980 | 0.812508 | 4.092954e-51 | -8.615850e-47 |
| Msa0506940 | Msa0577220 | 0.813318 | 2.719304e-51 | -8.615850e-47 |
| Msa0506940 | Msa0578090 | 0.858351 | 8.742352e-63 | -8.615850e-47 |
| Msa0506940 | Msa0586850 | 0.837085 | 6.399754e-57 | -8.615850e-47 |
| Msa0506940 | Msa0591060 | 0.806731 | 7.134283e-50 | -8.615850e-47 |
| Msa0506940 | Msa0591770 | 0.811427 | 7.039539e-51 | -8.615850e-47 |
| Msa0506940 | Msa0600610 | 0.810334 | 1.214013e-50 | -8.615850e-47 |
| Msa0506940 | Msa0616340 | 0.831795 | 1.363089e-55 | -8.615850e-47 |
| Msa0506940 | Msa0619180 | 0.826674 | 2.383489e-54 | -8.615850e-47 |
| Msa0506940 | Msa0626680 | 0.840201 | 1.003016e-57 | -8.615850e-47 |
| Msa0506940 | Msa0639120 | 0.801216 | 9.998022e-49 | -8.615850e-47 |
| Msa0506940 | Msa0641140 | 0.829956 | 3.851691e-55 | -8.615850e-47 |
| Msa0506940 | Msa0646130 | 0.805510 | 1.289039e-49 | -8.615850e-47 |
| Msa0506940 | Msa0651150 | 0.822156 | 2.753796e-53 | -8.615850e-47 |
| Msa0506940 | Msa0652300 | 0.803446 | 3.472804e-49 | -8.615850e-47 |
| Msa0506940 | Msa0664760 | 0.849504 | 3.098990e-60 | -8.615850e-47 |
| Msa0506940 | Msa0664960 | 0.805975 | 1.029559e-49 | -8.615850e-47 |
| Msa0506940 | Msa0669850 | 0.826881 | 2.126865e-54 | -8.615850e-47 |
| Msa0506940 | Msa0679680 | 0.813915 | 2.009936e-51 | -8.615850e-47 |
| Msa0506940 | Msa0703230 | 0.800761 | 1.238245e-48 | -8.615850e-47 |
| Msa0506940 | Msa0707390 | 0.816351 | 5.782062e-52 | -8.615850e-47 |
| Msa0506940 | Msa0711490 | 0.825352 | 4.913086e-54 | -8.615850e-47 |
| Msa0506940 | Msa0712310 | 0.808720 | 2.695962e-50 | -8.615850e-47 |
| Msa0506940 | Msa0713460 | 0.815963 | 7.061777e-52 | -8.615850e-47 |
| Msa0506940 | Msa0715110 | 0.824997 | 5.959766e-54 | -8.615850e-47 |
| Msa0506940 | Msa0715140 | 0.808680 | 2.749324e-50 | -8.615850e-47 |
| Msa0506940 | Msa0715150 | 0.834205 | 3.428158e-56 | -8.615850e-47 |
| Msa0506940 | Msa0735310 | 0.806095 | 9.716560e-50 | -8.615850e-47 |
| Msa0506940 | Msa0737800 | 0.801945 | 7.087730e-49 | -8.615850e-47 |
| Msa0506940 | Msa0743680 | 0.851704 | 7.460590e-61 | -8.615850e-47 |
| Msa0506940 | Msa0744090 | 0.826523 | 2.588908e-54 | -8.615850e-47 |
| Msa0506940 | Msa0753770 | 0.801778 | 7.666812e-49 | -8.615850e-47 |
| Msa0506940 | Msa0754720 | -0.815300 | 9.919515e-52 | -8.615850e-47 |
| Msa0506940 | Msa0757050 | 0.809751 | 1.620488e-50 | -8.615850e-47 |
| Msa0506940 | Msa0773200 | 0.808057 | 3.733990e-50 | -8.615850e-47 |
| Msa0506940 | Msa0784620 | 0.867229 | 1.595890e-65 | -8.615850e-47 |
| Msa0506940 | Msa0788110 | 0.800818 | 1.205769e-48 | -8.615850e-47 |
| Msa0506940 | Msa0795660 | 0.823074 | 1.684516e-53 | -8.615850e-47 |
| Msa0506940 | Msa0798060 | 0.801972 | 6.997842e-49 | -8.615850e-47 |
| Msa0506940 | Msa0814250 | 0.826153 | 3.171389e-54 | -8.615850e-47 |
| Msa0506940 | Msa0814320 | 0.804397 | 2.203563e-49 | -8.615850e-47 |
| Msa0506940 | Msa0817260 | 0.815355 | 9.648249e-52 | -8.615850e-47 |
| Msa0506940 | Msa0817270 | 0.803293 | 3.735797e-49 | -8.615850e-47 |
| Msa0506940 | Msa0818630 | 0.801943 | 7.091625e-49 | -8.615850e-47 |
| Msa0506940 | Msa0819560 | 0.805001 | 1.647742e-49 | -8.615850e-47 |
| Msa0506940 | Msa0820530 | -0.804225 | 2.392549e-49 | -8.615850e-47 |
| Msa0506940 | Msa0824730 | 0.848433 | 6.147171e-60 | -8.615850e-47 |
| Msa0506940 | Msa0825280 | 0.827586 | 1.441933e-54 | -8.615850e-47 |
| Msa0506940 | Msa0830990 | 0.804845 | 1.776131e-49 | -8.615850e-47 |
| Msa0506940 | Msa0850710 | 0.810674 | 1.025099e-50 | -8.615850e-47 |
| Msa0506940 | Msa0851470 | 0.825311 | 5.023890e-54 | -8.615850e-47 |
| Msa0506940 | Msa0863370 | 0.811934 | 5.460472e-51 | -8.615850e-47 |
| Msa0506940 | Msa0863800 | 0.858319 | 8.935899e-63 | -8.615850e-47 |
| Msa0506940 | Msa0866120 | 0.808139 | 3.586045e-50 | -8.615850e-47 |
| Msa0506940 | Msa0869010 | 0.815772 | 7.787344e-52 | -8.615850e-47 |
| Msa0506940 | Msa0895310 | 0.822948 | 1.801948e-53 | -8.615850e-47 |
| Msa0506940 | Msa0908170 | 0.823716 | 1.192129e-53 | -8.615850e-47 |
| Msa0506940 | Msa0918560 | 0.800307 | 1.532556e-48 | -8.615850e-47 |
| Msa0506940 | Msa0924150 | -0.801264 | 9.775051e-49 | -8.615850e-47 |
| Msa0506940 | Msa0933440 | 0.827840 | 1.252691e-54 | -8.615850e-47 |
| Msa0506940 | Msa0939650 | 0.806564 | 7.735718e-50 | -8.615850e-47 |
| Msa0506940 | Msa0940830 | 0.833233 | 5.999554e-56 | -8.615850e-47 |
| Msa0506940 | Msa0947530 | -0.823992 | 1.027368e-53 | -8.615850e-47 |
| Msa0506940 | Msa0959010 | 0.813473 | 2.514948e-51 | -8.615850e-47 |
| Msa0506940 | Msa0976330 | 0.812022 | 5.226198e-51 | -8.615850e-47 |
| Msa0506940 | Msa0977310 | 0.840267 | 9.637969e-58 | -8.615850e-47 |
| Msa0506940 | Msa0980940 | 0.801855 | 7.393968e-49 | -8.615850e-47 |
| Msa0506940 | Msa0985550 | 0.833213 | 6.068962e-56 | -8.615850e-47 |
| Msa0506940 | Msa0993530 | 0.818678 | 1.729335e-52 | -8.615850e-47 |
| Msa0506940 | Msa1003440 | 0.842631 | 2.298207e-58 | -8.615850e-47 |
| Msa0506940 | Msa1004420 | 0.825098 | 5.641087e-54 | -8.615850e-47 |
| Msa0506940 | Msa1015060 | 0.804944 | 1.693638e-49 | -8.615850e-47 |
| Msa0506940 | Msa1028290 | 0.805228 | 1.477495e-49 | -8.615850e-47 |
| Msa0506940 | Msa1030930 | 0.830592 | 2.692197e-55 | -8.615850e-47 |
| Msa0506940 | Msa1041520 | 0.829806 | 4.189359e-55 | -8.615850e-47 |
| Msa0506940 | Msa1047720 | 0.801952 | 7.063266e-49 | -8.615850e-47 |
| Msa0506940 | Msa1052390 | 0.803729 | 3.034086e-49 | -8.615850e-47 |
| Msa0506940 | Msa1069660 | -0.805803 | 1.118901e-49 | -8.615850e-47 |
| Msa0506940 | Msa1070050 | 0.827628 | 1.408780e-54 | -8.615850e-47 |
| Msa0506940 | Msa1073400 | 0.801681 | 8.027061e-49 | -8.615850e-47 |
| Msa0506940 | Msa1081560 | 0.808958 | 2.398061e-50 | -8.615850e-47 |
| Msa0506940 | Msa1083210 | 0.827021 | 1.968597e-54 | -8.615850e-47 |
| Msa0506940 | Msa1083880 | 0.833813 | 4.298875e-56 | -8.615850e-47 |
| Msa0506940 | Msa1085970 | 0.806116 | 9.615471e-50 | -8.615850e-47 |
| Msa0506940 | Msa1089840 | 0.806578 | 7.683202e-50 | -8.615850e-47 |
| Msa0506940 | Msa1092820 | 0.802380 | 5.765660e-49 | -8.615850e-47 |
| Msa0506940 | Msa1093330 | 0.815242 | 1.021860e-51 | -8.615850e-47 |
| Msa0506940 | Msa1113590 | 0.809573 | 1.769865e-50 | -8.615850e-47 |
| Msa0506940 | Msa1124310 | 0.811454 | 6.945789e-51 | -8.615850e-47 |
| Msa0506940 | Msa1125470 | 0.820638 | 6.169854e-53 | -8.615850e-47 |
| Msa0506940 | Msa1125550 | 0.832724 | 8.026828e-56 | -8.615850e-47 |
| Msa0506940 | Msa1127830 | 0.825651 | 4.173466e-54 | -8.615850e-47 |
| Msa0506940 | Msa1130210 | -0.802812 | 4.696203e-49 | -8.615850e-47 |
| Msa0506940 | Msa1160360 | 0.805934 | 1.050169e-49 | -8.615850e-47 |
| Msa0506940 | Msa1166410 | 0.809443 | 1.887953e-50 | -8.615850e-47 |
| Msa0506940 | Msa1172130 | -0.809962 | 1.460117e-50 | -8.615850e-47 |
| Msa0506940 | Msa1174100 | 0.810828 | 9.490965e-51 | -8.615850e-47 |
| Msa0506940 | Msa1178050 | 0.810270 | 1.253250e-50 | -8.615850e-47 |
| Msa0506940 | Msa1181170 | -0.842767 | 2.115294e-58 | -8.615850e-47 |
| Msa0506940 | Msa1183660 | 0.809164 | 2.166561e-50 | -8.615850e-47 |
| Msa0506940 | Msa1185540 | 0.806302 | 8.787088e-50 | -8.615850e-47 |
| Msa0506940 | Msa1198880 | 0.829630 | 4.623477e-55 | -8.615850e-47 |
| Msa0506940 | Msa1199290 | 0.823853 | 1.107457e-53 | -8.615850e-47 |
| Msa0506940 | Msa1201830 | 0.821737 | 3.443596e-53 | -8.615850e-47 |
| Msa0506940 | Msa1207730 | 0.822469 | 2.330412e-53 | -8.615850e-47 |
| Msa0506940 | Msa1221900 | 0.802102 | 6.578729e-49 | -8.615850e-47 |
| Msa0506940 | Msa1227690 | 0.813692 | 2.250676e-51 | -8.615850e-47 |
| Msa0506940 | Msa1228290 | 0.803069 | 4.156930e-49 | -8.615850e-47 |
| Msa0506940 | Msa1228890 | 0.815075 | 1.113207e-51 | -8.615850e-47 |
| Msa0506940 | Msa1236070 | -0.810625 | 1.050348e-50 | -8.615850e-47 |
| Msa0506940 | Msa1237030 | 0.806449 | 8.180738e-50 | -8.615850e-47 |
| Msa0506940 | Msa1246530 | -0.825564 | 4.376196e-54 | -8.615850e-47 |
| Msa0506940 | Msa1253810 | 0.804195 | 2.427420e-49 | -8.615850e-47 |
| Msa0506940 | Msa1254710 | 0.817001 | 4.135863e-52 | -8.615850e-47 |
| Msa0506940 | Msa1267840 | 0.805248 | 1.463207e-49 | -8.615850e-47 |
| Msa0506940 | Msa1280620 | 0.805612 | 1.227192e-49 | -8.615850e-47 |
| Msa0506940 | Msa1294840 | 0.827322 | 1.667995e-54 | -8.615850e-47 |
| Msa0506940 | Msa1294960 | 0.816538 | 5.252500e-52 | -8.615850e-47 |
| Msa0506940 | Msa1296300 | 0.819789 | 9.659618e-53 | -8.615850e-47 |
| Msa0506940 | Msa1309130 | 0.816983 | 4.174748e-52 | -8.615850e-47 |
| Msa0506940 | Msa1330890 | -0.817253 | 3.629955e-52 | -8.615850e-47 |
| Msa0506940 | Msa1337730 | 0.830825 | 2.361607e-55 | -8.615850e-47 |
| Msa0506940 | Msa1340830 | 0.809059 | 2.281211e-50 | -8.615850e-47 |
| Msa0506940 | Msa1341070 | 0.803339 | 3.654789e-49 | -8.615850e-47 |
| Msa0506940 | Msa1344850 | 0.815666 | 8.226834e-52 | -8.615850e-47 |
| Msa0506940 | Msa1360890 | -0.844451 | 7.501137e-59 | -8.615850e-47 |
| Msa0506940 | Msa1362510 | 0.830006 | 3.744542e-55 | -8.615850e-47 |
| Msa0506940 | Msa1363700 | 0.841025 | 6.103284e-58 | -8.615850e-47 |
| Msa0506940 | Msa1365150 | 0.800588 | 1.343254e-48 | -8.615850e-47 |
| Msa0506940 | Msa1380970 | 0.809619 | 1.730591e-50 | -8.615850e-47 |
| Msa0506940 | Msa1386230 | 0.820591 | 6.326350e-53 | -8.615850e-47 |
| Msa0506940 | Msa1390230 | 0.919190 | 6.130478e-87 | -8.615850e-47 |
| Msa0506940 | Msa1390310 | 0.840468 | 8.537007e-58 | -8.615850e-47 |
| Msa0506940 | Msa1393800 | 0.823290 | 1.499530e-53 | -8.615850e-47 |
| Msa0506940 | Msa1398860 | 0.842382 | 2.675097e-58 | -8.615850e-47 |
| Msa0506940 | Msa1404540 | 0.804897 | 1.732581e-49 | -8.615850e-47 |
| Msa0506940 | Msa1431060 | 0.805938 | 1.048250e-49 | -8.615850e-47 |
| Msa0506940 | Msa1438450 | 0.830669 | 2.577646e-55 | -8.615850e-47 |
| Msa0506940 | Msa1438640 | 0.827220 | 1.764279e-54 | -8.615850e-47 |
| Msa0506940 | Msa1439960 | 0.802423 | 5.651404e-49 | -8.615850e-47 |
| Msa0506940 | Msa1442220 | -0.826899 | 2.106292e-54 | -8.615850e-47 |
| Msa0506940 | Msa1442850 | 0.804340 | 2.263637e-49 | -8.615850e-47 |
| Msa0506940 | Msa1466090 | 0.800750 | 1.244608e-48 | -8.615850e-47 |
| Msa0506940 | Msa1466460 | 0.802249 | 6.136089e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506940 | MtrunA17_Chr3g0110281 | 98.974 | 195 | 2 | 0 | 1 | 195 | 23 | 217 | 2.37e-141 | 392 |
| Msa0506940 | MtrunA17_Chr5g0434521 | 70.984 | 193 | 52 | 2 | 1 | 191 | 1 | 191 | 1.13e-95 | 276 |
| Msa0506940 | MtrunA17_Chr1g0161131 | 66.871 | 163 | 51 | 2 | 10 | 171 | 1 | 161 | 1.15e-73 | 219 |
| Msa0506940 | MtrunA17_Chr8g0391621 | 63.190 | 163 | 57 | 2 | 10 | 171 | 1 | 161 | 3.17e-70 | 211 |
| Msa0506940 | MtrunA17_Chr6g0479111 | 62.500 | 160 | 55 | 3 | 8 | 166 | 70 | 225 | 9.26e-67 | 204 |
| Msa0506940 | MtrunA17_Chr8g0353331 | 50.314 | 159 | 70 | 3 | 13 | 164 | 4 | 160 | 4.13e-48 | 155 |
| Msa0506940 | MtrunA17_Chr7g0252391 | 45.614 | 171 | 84 | 4 | 15 | 177 | 6 | 175 | 1.08e-38 | 132 |
| Msa0506940 | MtrunA17_Chr1g0189471 | 50.000 | 62 | 30 | 1 | 13 | 74 | 4 | 64 | 2.46e-14 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506940 | AT1G14860.1 | 68.354 | 158 | 48 | 1 | 10 | 167 | 1 | 156 | 1.87e-74 | 222 |
| Msa0506940 | AT2G01670.1 | 65.000 | 160 | 54 | 1 | 8 | 167 | 4 | 161 | 7.97e-73 | 218 |
| Msa0506940 | AT1G18300.1 | 64.151 | 159 | 55 | 2 | 8 | 165 | 38 | 195 | 4.43e-71 | 214 |
| Msa0506940 | AT1G73540.1 | 60.870 | 161 | 55 | 3 | 8 | 166 | 39 | 193 | 1.12e-64 | 198 |
| Msa0506940 | AT3G26690.1 | 46.629 | 178 | 81 | 5 | 12 | 177 | 3 | 178 | 1.39e-44 | 147 |
| Msa0506940 | AT3G26690.2 | 46.629 | 178 | 81 | 5 | 12 | 177 | 3 | 178 | 1.39e-44 | 147 |
| Msa0506940 | AT1G12880.1 | 48.171 | 164 | 72 | 4 | 13 | 164 | 4 | 166 | 8.14e-43 | 142 |
| Msa0506940 | AT3G12600.1 | 50.311 | 161 | 67 | 3 | 10 | 160 | 1 | 158 | 5.70e-39 | 132 |
| Msa0506940 | AT3G12600.2 | 50.336 | 149 | 61 | 3 | 22 | 160 | 4 | 149 | 3.79e-35 | 122 |
Find 63 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGAAACAGAGAGTTTA+AGG | 0.153308 | 3_4:+53788791 | None:intergenic |
| TTGCTTGGTGCAGGGTAAAT+TGG | 0.178727 | 3_4:-53787638 | Msa0506940:intron |
| ATAAGTTCTGTTCCCTTTAC+TGG | 0.208033 | 3_4:-53786535 | Msa0506940:three_prime_UTR |
| AAAACTTCTTGAAGTCAATT+AGG | 0.266342 | 3_4:-53786722 | Msa0506940:three_prime_UTR |
| TATATACTATCATAATAATT+TGG | 0.282242 | 3_4:+53786935 | None:intergenic |
| TCTACTTGTTCAAGAGGAAT+TGG | 0.306076 | 3_4:-53787557 | Msa0506940:CDS |
| CTTTACAAAACACACAATAA+TGG | 0.312157 | 3_4:-53788767 | Msa0506940:exon |
| TGCAGGGTAAATTGGGTAAA+TGG | 0.319017 | 3_4:-53787630 | Msa0506940:intron |
| TTCAAGAGGAATTGGAGTTC+TGG | 0.326630 | 3_4:-53787549 | Msa0506940:CDS |
| AATAATTTGGCTCAATTCAA+TGG | 0.336424 | 3_4:+53786948 | None:intergenic |
| GCATCTCCAATGCAATTTAG+AGG | 0.344908 | 3_4:+53787061 | None:intergenic |
| ACACACAATAATGGTTGCTT+TGG | 0.348822 | 3_4:-53788758 | Msa0506940:exon |
| AGACTAGTAAACCGTCTCTT+AGG | 0.352300 | 3_4:-53787118 | Msa0506940:CDS |
| TACCATACAGATATAAGATT+GGG | 0.391619 | 3_4:-53788193 | Msa0506940:CDS |
| TGTGATGTGATTATCATTTG+TGG | 0.395872 | 3_4:-53786561 | Msa0506940:three_prime_UTR |
| ATATATATTAAATGTATTCA+TGG | 0.401816 | 3_4:-53786767 | Msa0506940:three_prime_UTR |
| TGCTTGGTGCAGGGTAAATT+GGG | 0.401857 | 3_4:-53787637 | Msa0506940:intron |
| GTCACATTGGTTTCTCGTAC+TGG | 0.402078 | 3_4:-53788718 | Msa0506940:CDS |
| TCCCCAATCTTATATCTGTA+TGG | 0.410177 | 3_4:+53788191 | None:intergenic |
| ATTATGTTCTTAAAACTACT+TGG | 0.415061 | 3_4:+53786459 | None:intergenic |
| CTGGTGGATGAAAGAGGCTT+TGG | 0.431939 | 3_4:-53787143 | Msa0506940:CDS |
| AAAGGTCGTCGTCAAGTTGT+TGG | 0.437350 | 3_4:-53788673 | Msa0506940:CDS |
| TCTAATATGAAGAAGGGATA+AGG | 0.443747 | 3_4:-53786610 | Msa0506940:three_prime_UTR |
| AAAACCTTCGTCAAAGAAGA+TGG | 0.452927 | 3_4:-53787519 | Msa0506940:CDS |
| CAAAACTTCATCTCCAGTAA+AGG | 0.455325 | 3_4:+53786522 | None:intergenic |
| AAAACTTCATCTCCAGTAAA+GGG | 0.456071 | 3_4:+53786523 | None:intergenic |
| ACATATGATACTTTATATGA+TGG | 0.457732 | 3_4:-53787592 | Msa0506940:CDS |
| AGGTTGAGGAGAAGAATAGT+AGG | 0.461776 | 3_4:-53786973 | Msa0506940:three_prime_UTR |
| ACATCACACAATACAATAAG+TGG | 0.462429 | 3_4:+53786576 | None:intergenic |
| TAACCTCTCTAATATGAAGA+AGG | 0.464022 | 3_4:-53786617 | Msa0506940:three_prime_UTR |
| AAGGTCGTCGTCAAGTTGTT+GGG | 0.471306 | 3_4:-53788672 | Msa0506940:intron |
| ATACCATACAGATATAAGAT+TGG | 0.489360 | 3_4:-53788194 | Msa0506940:CDS |
| TTGTTATAAGTTCTCAGAAA+GGG | 0.490101 | 3_4:-53788130 | Msa0506940:CDS |
| TACTAAATAACAGGGAGGCT+GGG | 0.495307 | 3_4:-53787991 | Msa0506940:intron |
| CTACGTCCTCTAAATTGCAT+TGG | 0.502705 | 3_4:-53787067 | Msa0506940:CDS |
| TTGTTAAAAGTGTAATTTCG+TGG | 0.512493 | 3_4:-53787028 | Msa0506940:exon |
| TCAAGAAAATGTTGTCACAT+TGG | 0.512517 | 3_4:-53788731 | Msa0506940:CDS |
| CTTGTTATAAGTTCTCAGAA+AGG | 0.514027 | 3_4:-53788131 | Msa0506940:CDS |
| TCAACACTGGTGGATGAAAG+AGG | 0.518367 | 3_4:-53787149 | Msa0506940:CDS |
| TATATATTAAATGTATTCAT+GGG | 0.519572 | 3_4:-53786766 | Msa0506940:three_prime_UTR |
| GAGTTACAACGTTATAGAAA+AGG | 0.522985 | 3_4:-53788691 | Msa0506940:CDS |
| TTACTAAATAACAGGGAGGC+TGG | 0.524307 | 3_4:-53787992 | Msa0506940:intron |
| TTACCCATCTTCTTTGACGA+AGG | 0.524824 | 3_4:+53787515 | None:intergenic |
| ATAAGTTCTCAGAAAGGGAA+AGG | 0.542940 | 3_4:-53788125 | Msa0506940:CDS |
| GTTTCCTCTACTTGTTCAAG+AGG | 0.548107 | 3_4:-53787563 | Msa0506940:CDS |
| AGAGAAACCATGGAGGAAGC+TGG | 0.548494 | 3_4:-53787936 | Msa0506940:CDS |
| TCGTACACCAGCTTCCTCCA+TGG | 0.562948 | 3_4:+53787929 | None:intergenic |
| GGCAGCTTTGAGAGAAACCA+TGG | 0.565133 | 3_4:-53787946 | Msa0506940:CDS |
| TAAAAGTGTAATTTCGTGGA+GGG | 0.569228 | 3_4:-53787024 | Msa0506940:exon |
| TAAGTTCTCAGAAAGGGAAA+GGG | 0.569652 | 3_4:-53788124 | Msa0506940:CDS |
| ATCCCTTCTTCATATTAGAG+AGG | 0.571358 | 3_4:+53786614 | None:intergenic |
| AATTCCTCTTGAACAAGTAG+AGG | 0.573287 | 3_4:+53787559 | None:intergenic |
| AAACCTTCGTCAAAGAAGAT+GGG | 0.587211 | 3_4:-53787518 | Msa0506940:intron |
| CAAGAGATGTTTGTCAACAC+TGG | 0.594375 | 3_4:-53787162 | Msa0506940:CDS |
| GAAAGGGATGCTATTTCCAA+AGG | 0.599650 | 3_4:-53788108 | Msa0506940:intron |
| AACCTCTCTAATATGAAGAA+GGG | 0.605647 | 3_4:-53786616 | Msa0506940:three_prime_UTR |
| TTAAAAGTGTAATTTCGTGG+AGG | 0.620018 | 3_4:-53787025 | Msa0506940:exon |
| ATGGAGGAAGCTGGTGTACG+AGG | 0.648306 | 3_4:-53787927 | Msa0506940:CDS |
| GATTTGTGCTAATGTAAGAG+AGG | 0.649109 | 3_4:-53786665 | Msa0506940:three_prime_UTR |
| ACCATACAGATATAAGATTG+GGG | 0.668226 | 3_4:-53788192 | Msa0506940:CDS |
| GAGATGTTTGTCAACACTGG+TGG | 0.687529 | 3_4:-53787159 | Msa0506940:CDS |
| TGGTGTACGAGGCATTGTTG+AGG | 0.717499 | 3_4:-53787916 | Msa0506940:intron |
| AGCTTTGAGAGAAACCATGG+AGG | 0.776762 | 3_4:-53787943 | Msa0506940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATTAAAGTC+TGG | + | chr3_4:53787868-53787887 | None:intergenic | 10.0% |
| !! | TATATACTATCATAATAATT+TGG | + | chr3_4:53788364-53788383 | None:intergenic | 10.0% |
| !!! | CAAAAATAAGTATTTTTTTA+GGG | + | chr3_4:53788440-53788459 | None:intergenic | 10.0% |
| !! | ATATATATTAAATGTATTCA+TGG | - | chr3_4:53788529-53788548 | Msa0506940:intron | 10.0% |
| !! | TATATATTAAATGTATTCAT+GGG | - | chr3_4:53788530-53788549 | Msa0506940:intron | 10.0% |
| !! | TATATATATATATTAAAGTC+TGG | + | chr3_4:53787868-53787887 | None:intergenic | 10.0% |
| !! | TATATACTATCATAATAATT+TGG | + | chr3_4:53788364-53788383 | None:intergenic | 10.0% |
| !!! | CAAAAATAAGTATTTTTTTA+GGG | + | chr3_4:53788440-53788459 | None:intergenic | 10.0% |
| !! | ATATATATTAAATGTATTCA+TGG | - | chr3_4:53788529-53788548 | Msa0506940:intron | 10.0% |
| !! | TATATATTAAATGTATTCAT+GGG | - | chr3_4:53788530-53788549 | Msa0506940:intron | 10.0% |
| !!! | AAAAAATACTATTGGTTAAT+GGG | - | chr3_4:53786849-53786868 | Msa0506940:three_prime_UTR | 15.0% |
| !! | TTTATTGAATTTAACATCAA+TGG | - | chr3_4:53787038-53787057 | Msa0506940:CDS | 15.0% |
| !!! | GATAATTCTCTAAAAATAAT+TGG | - | chr3_4:53787614-53787633 | Msa0506940:CDS | 15.0% |
| !! | TAAAAATATTACAGACTAAA+TGG | - | chr3_4:53787918-53787937 | Msa0506940:CDS | 15.0% |
| !! | CTAAAAGAATATATTATACT+AGG | + | chr3_4:53787974-53787993 | None:intergenic | 15.0% |
| !!! | CTAGTATAATATATTCTTTT+AGG | - | chr3_4:53787972-53787991 | Msa0506940:CDS | 15.0% |
| !!! | TATTCTTTTAGGAATTAAAT+TGG | - | chr3_4:53787983-53788002 | Msa0506940:intron | 15.0% |
| !!! | TTGTTATTAATTTTCTGAAA+GGG | - | chr3_4:53788052-53788071 | Msa0506940:intron | 15.0% |
| !!! | GCAAAAATAAGTATTTTTTT+AGG | + | chr3_4:53788441-53788460 | None:intergenic | 15.0% |
| !!! | AAAAAATACTATTGGTTAAT+GGG | - | chr3_4:53786849-53786868 | Msa0506940:three_prime_UTR | 15.0% |
| !! | TTTATTGAATTTAACATCAA+TGG | - | chr3_4:53787038-53787057 | Msa0506940:CDS | 15.0% |
| !!! | GATAATTCTCTAAAAATAAT+TGG | - | chr3_4:53787614-53787633 | Msa0506940:CDS | 15.0% |
| !! | TAAAAATATTACAGACTAAA+TGG | - | chr3_4:53787918-53787937 | Msa0506940:CDS | 15.0% |
| !! | CTAAAAGAATATATTATACT+AGG | + | chr3_4:53787974-53787993 | None:intergenic | 15.0% |
| !!! | CTAGTATAATATATTCTTTT+AGG | - | chr3_4:53787972-53787991 | Msa0506940:CDS | 15.0% |
| !!! | TATTCTTTTAGGAATTAAAT+TGG | - | chr3_4:53787983-53788002 | Msa0506940:intron | 15.0% |
| !!! | TTGTTATTAATTTTCTGAAA+GGG | - | chr3_4:53788052-53788071 | Msa0506940:intron | 15.0% |
| !!! | GCAAAAATAAGTATTTTTTT+AGG | + | chr3_4:53788441-53788460 | None:intergenic | 15.0% |
| !! | ATAATACTGCTAAATTATCA+CGG | - | chr3_4:53786804-53786823 | Msa0506940:three_prime_UTR | 20.0% |
| !! | TCAGTTACAAAAAATACTAT+TGG | - | chr3_4:53786841-53786860 | Msa0506940:three_prime_UTR | 20.0% |
| !!! | CAAAAAATACTATTGGTTAA+TGG | - | chr3_4:53786848-53786867 | Msa0506940:three_prime_UTR | 20.0% |
| !! | ACATATGATACTTTATATGA+TGG | - | chr3_4:53787704-53787723 | Msa0506940:intron | 20.0% |
| !!! | TTTTATAGTTACAACTTACA+CGG | + | chr3_4:53787903-53787922 | None:intergenic | 20.0% |
| !! | TAATTTAGTGACTAAATTGA+CGG | - | chr3_4:53788020-53788039 | Msa0506940:intron | 20.0% |
| !!! | GTTGTTATTAATTTTCTGAA+AGG | - | chr3_4:53788051-53788070 | Msa0506940:intron | 20.0% |
| !!! | TTGTTTGAAACTTTCTATTT+TGG | - | chr3_4:53788086-53788105 | Msa0506940:intron | 20.0% |
| !!! | TGTTTGAAACTTTCTATTTT+GGG | - | chr3_4:53788087-53788106 | Msa0506940:intron | 20.0% |
| !! | ATAATACTGCTAAATTATCA+CGG | - | chr3_4:53786804-53786823 | Msa0506940:three_prime_UTR | 20.0% |
| !! | TCAGTTACAAAAAATACTAT+TGG | - | chr3_4:53786841-53786860 | Msa0506940:three_prime_UTR | 20.0% |
| !!! | CAAAAAATACTATTGGTTAA+TGG | - | chr3_4:53786848-53786867 | Msa0506940:three_prime_UTR | 20.0% |
| !! | ACATATGATACTTTATATGA+TGG | - | chr3_4:53787704-53787723 | Msa0506940:intron | 20.0% |
| !!! | TTTTATAGTTACAACTTACA+CGG | + | chr3_4:53787903-53787922 | None:intergenic | 20.0% |
| !! | TAATTTAGTGACTAAATTGA+CGG | - | chr3_4:53788020-53788039 | Msa0506940:intron | 20.0% |
| !!! | GTTGTTATTAATTTTCTGAA+AGG | - | chr3_4:53788051-53788070 | Msa0506940:intron | 20.0% |
| !!! | TTGTTTGAAACTTTCTATTT+TGG | - | chr3_4:53788086-53788105 | Msa0506940:intron | 20.0% |
| !!! | TGTTTGAAACTTTCTATTTT+GGG | - | chr3_4:53788087-53788106 | Msa0506940:intron | 20.0% |
| ! | ATAATGAAACAGAGAGTTTA+AGG | + | chr3_4:53786508-53786527 | None:intergenic | 25.0% |
| ! | CTTTACAAAACACACAATAA+TGG | - | chr3_4:53786529-53786548 | Msa0506940:three_prime_UTR | 25.0% |
| ! | AAAAATTGTGACTTTCATTG+TGG | - | chr3_4:53786724-53786743 | Msa0506940:three_prime_UTR | 25.0% |
| ! | AAAATTGTGACTTTCATTGT+GGG | - | chr3_4:53786725-53786744 | Msa0506940:three_prime_UTR | 25.0% |
| !!! | GATTCTAAAGAAGTACTAAT+TGG | - | chr3_4:53786988-53787007 | Msa0506940:three_prime_UTR | 25.0% |
| ! | ATACCATACAGATATAAGAT+TGG | - | chr3_4:53787102-53787121 | Msa0506940:CDS | 25.0% |
| ! | TACCATACAGATATAAGATT+GGG | - | chr3_4:53787103-53787122 | Msa0506940:CDS | 25.0% |
| !!! | ATTGGATGTTTTAGATGAAT+TGG | - | chr3_4:53787137-53787156 | Msa0506940:CDS | 25.0% |
| ! | TTGTTATAAGTTCTCAGAAA+GGG | - | chr3_4:53787166-53787185 | Msa0506940:CDS | 25.0% |
| ! | GACTAATATCTATATACCTT+TGG | + | chr3_4:53787207-53787226 | None:intergenic | 25.0% |
| ! | TGTATTGCTTACTAAATAAC+AGG | - | chr3_4:53787296-53787315 | Msa0506940:intron | 25.0% |
| ! | GTATTGCTTACTAAATAACA+GGG | - | chr3_4:53787297-53787316 | Msa0506940:intron | 25.0% |
| ! | ATTAGATGAATCTCAAAAAG+AGG | - | chr3_4:53787329-53787348 | Msa0506940:intron | 25.0% |
| !! | TTACGGTATCTAGAATAAAT+TGG | + | chr3_4:53787465-53787484 | None:intergenic | 25.0% |
| !!! | ATGAATTGTTTTGAAGAACT+CGG | - | chr3_4:53787550-53787569 | Msa0506940:CDS | 25.0% |
| !! | GAAGAATCCTACAATTTTAA+AGG | - | chr3_4:53787584-53787603 | Msa0506940:CDS | 25.0% |
| !!! | CATTTAGCCTTTAAAATTGT+AGG | + | chr3_4:53787594-53787613 | None:intergenic | 25.0% |
| !!! | CTACAATTTTAAAGGCTAAA+TGG | - | chr3_4:53787592-53787611 | Msa0506940:CDS | 25.0% |
| !! | TCTCTAAAAATAATTGGCTT+TGG | - | chr3_4:53787620-53787639 | Msa0506940:CDS | 25.0% |
| ! | ATACTAATGTTACTATTGCT+TGG | - | chr3_4:53787643-53787662 | Msa0506940:intron | 25.0% |
| ! | AATATTACAGACTAAATGGA+TGG | - | chr3_4:53787922-53787941 | Msa0506940:CDS | 25.0% |
| !!! | GGATGGATTTTATATACTTA+AGG | - | chr3_4:53787939-53787958 | Msa0506940:CDS | 25.0% |
| ! | ATATATTATACTAGGACACA+TGG | + | chr3_4:53787966-53787985 | None:intergenic | 25.0% |
| !!! | GTTTGAAACTTTCTATTTTG+GGG | - | chr3_4:53788088-53788107 | Msa0506940:intron | 25.0% |
| !! | TTGTTAAAAGTGTAATTTCG+TGG | - | chr3_4:53788268-53788287 | Msa0506940:intron | 25.0% |
| !!! | AATTTTTTTTGTGTTGCTTG+AGG | - | chr3_4:53788303-53788322 | Msa0506940:intron | 25.0% |
| !! | AATAATTTGGCTCAATTCAA+TGG | + | chr3_4:53788351-53788370 | None:intergenic | 25.0% |
| !!! | TTTTTTCTCATCTTATGATG+AGG | - | chr3_4:53788486-53788505 | Msa0506940:intron | 25.0% |
| !! | TGAGGATTAATTTTCAATTG+TGG | - | chr3_4:53788504-53788523 | Msa0506940:intron | 25.0% |
| ! | AAAACTTCTTGAAGTCAATT+AGG | - | chr3_4:53788574-53788593 | Msa0506940:intron | 25.0% |
| ! | ATAATGAAACAGAGAGTTTA+AGG | + | chr3_4:53786508-53786527 | None:intergenic | 25.0% |
| ! | CTTTACAAAACACACAATAA+TGG | - | chr3_4:53786529-53786548 | Msa0506940:three_prime_UTR | 25.0% |
| ! | AAAAATTGTGACTTTCATTG+TGG | - | chr3_4:53786724-53786743 | Msa0506940:three_prime_UTR | 25.0% |
| ! | AAAATTGTGACTTTCATTGT+GGG | - | chr3_4:53786725-53786744 | Msa0506940:three_prime_UTR | 25.0% |
| !!! | GATTCTAAAGAAGTACTAAT+TGG | - | chr3_4:53786988-53787007 | Msa0506940:three_prime_UTR | 25.0% |
| ! | ATACCATACAGATATAAGAT+TGG | - | chr3_4:53787102-53787121 | Msa0506940:CDS | 25.0% |
| ! | TACCATACAGATATAAGATT+GGG | - | chr3_4:53787103-53787122 | Msa0506940:CDS | 25.0% |
| !!! | ATTGGATGTTTTAGATGAAT+TGG | - | chr3_4:53787137-53787156 | Msa0506940:CDS | 25.0% |
| ! | TTGTTATAAGTTCTCAGAAA+GGG | - | chr3_4:53787166-53787185 | Msa0506940:CDS | 25.0% |
| ! | GACTAATATCTATATACCTT+TGG | + | chr3_4:53787207-53787226 | None:intergenic | 25.0% |
| ! | TGTATTGCTTACTAAATAAC+AGG | - | chr3_4:53787296-53787315 | Msa0506940:intron | 25.0% |
| ! | GTATTGCTTACTAAATAACA+GGG | - | chr3_4:53787297-53787316 | Msa0506940:intron | 25.0% |
| ! | ATTAGATGAATCTCAAAAAG+AGG | - | chr3_4:53787329-53787348 | Msa0506940:intron | 25.0% |
| !! | TTACGGTATCTAGAATAAAT+TGG | + | chr3_4:53787465-53787484 | None:intergenic | 25.0% |
| !!! | ATGAATTGTTTTGAAGAACT+CGG | - | chr3_4:53787550-53787569 | Msa0506940:CDS | 25.0% |
| !! | GAAGAATCCTACAATTTTAA+AGG | - | chr3_4:53787584-53787603 | Msa0506940:CDS | 25.0% |
| !!! | CATTTAGCCTTTAAAATTGT+AGG | + | chr3_4:53787594-53787613 | None:intergenic | 25.0% |
| !!! | CTACAATTTTAAAGGCTAAA+TGG | - | chr3_4:53787592-53787611 | Msa0506940:CDS | 25.0% |
| !! | TCTCTAAAAATAATTGGCTT+TGG | - | chr3_4:53787620-53787639 | Msa0506940:CDS | 25.0% |
| ! | ATACTAATGTTACTATTGCT+TGG | - | chr3_4:53787643-53787662 | Msa0506940:intron | 25.0% |
| ! | AATATTACAGACTAAATGGA+TGG | - | chr3_4:53787922-53787941 | Msa0506940:CDS | 25.0% |
| !!! | GGATGGATTTTATATACTTA+AGG | - | chr3_4:53787939-53787958 | Msa0506940:CDS | 25.0% |
| ! | ATATATTATACTAGGACACA+TGG | + | chr3_4:53787966-53787985 | None:intergenic | 25.0% |
| !!! | GTTTGAAACTTTCTATTTTG+GGG | - | chr3_4:53788088-53788107 | Msa0506940:intron | 25.0% |
| !! | TTGTTAAAAGTGTAATTTCG+TGG | - | chr3_4:53788268-53788287 | Msa0506940:intron | 25.0% |
| !!! | AATTTTTTTTGTGTTGCTTG+AGG | - | chr3_4:53788303-53788322 | Msa0506940:intron | 25.0% |
| !! | AATAATTTGGCTCAATTCAA+TGG | + | chr3_4:53788351-53788370 | None:intergenic | 25.0% |
| !!! | TTTTTTCTCATCTTATGATG+AGG | - | chr3_4:53788486-53788505 | Msa0506940:intron | 25.0% |
| !! | TGAGGATTAATTTTCAATTG+TGG | - | chr3_4:53788504-53788523 | Msa0506940:intron | 25.0% |
| ! | AAAACTTCTTGAAGTCAATT+AGG | - | chr3_4:53788574-53788593 | Msa0506940:intron | 25.0% |
| TCAAGAAAATGTTGTCACAT+TGG | - | chr3_4:53786565-53786584 | Msa0506940:three_prime_UTR | 30.0% | |
| GAGTTACAACGTTATAGAAA+AGG | - | chr3_4:53786605-53786624 | Msa0506940:three_prime_UTR | 30.0% | |
| AAATTGTGACTTTCATTGTG+GGG | - | chr3_4:53786726-53786745 | Msa0506940:three_prime_UTR | 30.0% | |
| !! | GACCACTTTTGATAATTTTG+AGG | - | chr3_4:53786773-53786792 | Msa0506940:three_prime_UTR | 30.0% |
| CACCTCAAAATTATCAAAAG+TGG | + | chr3_4:53786778-53786797 | None:intergenic | 30.0% | |
| ACCATACAGATATAAGATTG+GGG | - | chr3_4:53787104-53787123 | Msa0506940:CDS | 30.0% | |
| ! | CTTGTTATAAGTTCTCAGAA+AGG | - | chr3_4:53787165-53787184 | Msa0506940:CDS | 30.0% |
| !!! | TGAATTGTTTTGAAGAACTC+GGG | - | chr3_4:53787551-53787570 | Msa0506940:CDS | 30.0% |
| ! | CACTTTTAACAAGTCAGATT+TGG | + | chr3_4:53788260-53788279 | None:intergenic | 30.0% |
| ! | TTAAAAGTGTAATTTCGTGG+AGG | - | chr3_4:53788271-53788290 | Msa0506940:intron | 30.0% |
| ! | TAAAAGTGTAATTTCGTGGA+GGG | - | chr3_4:53788272-53788291 | Msa0506940:intron | 30.0% |
| TAACCTCTCTAATATGAAGA+AGG | - | chr3_4:53788679-53788698 | Msa0506940:CDS | 30.0% | |
| AACCTCTCTAATATGAAGAA+GGG | - | chr3_4:53788680-53788699 | Msa0506940:CDS | 30.0% | |
| TCTAATATGAAGAAGGGATA+AGG | - | chr3_4:53788686-53788705 | Msa0506940:CDS | 30.0% | |
| ACATCACACAATACAATAAG+TGG | + | chr3_4:53788723-53788742 | None:intergenic | 30.0% | |
| TGTGATGTGATTATCATTTG+TGG | - | chr3_4:53788735-53788754 | Msa0506940:CDS | 30.0% | |
| AAAACTTCATCTCCAGTAAA+GGG | + | chr3_4:53788776-53788795 | None:intergenic | 30.0% | |
| TCAAGAAAATGTTGTCACAT+TGG | - | chr3_4:53786565-53786584 | Msa0506940:three_prime_UTR | 30.0% | |
| GAGTTACAACGTTATAGAAA+AGG | - | chr3_4:53786605-53786624 | Msa0506940:three_prime_UTR | 30.0% | |
| AAATTGTGACTTTCATTGTG+GGG | - | chr3_4:53786726-53786745 | Msa0506940:three_prime_UTR | 30.0% | |
| !! | GACCACTTTTGATAATTTTG+AGG | - | chr3_4:53786773-53786792 | Msa0506940:three_prime_UTR | 30.0% |
| CACCTCAAAATTATCAAAAG+TGG | + | chr3_4:53786778-53786797 | None:intergenic | 30.0% | |
| ACCATACAGATATAAGATTG+GGG | - | chr3_4:53787104-53787123 | Msa0506940:CDS | 30.0% | |
| ! | CTTGTTATAAGTTCTCAGAA+AGG | - | chr3_4:53787165-53787184 | Msa0506940:CDS | 30.0% |
| !!! | TGAATTGTTTTGAAGAACTC+GGG | - | chr3_4:53787551-53787570 | Msa0506940:CDS | 30.0% |
| ! | CACTTTTAACAAGTCAGATT+TGG | + | chr3_4:53788260-53788279 | None:intergenic | 30.0% |
| ! | TTAAAAGTGTAATTTCGTGG+AGG | - | chr3_4:53788271-53788290 | Msa0506940:intron | 30.0% |
| ! | TAAAAGTGTAATTTCGTGGA+GGG | - | chr3_4:53788272-53788291 | Msa0506940:intron | 30.0% |
| TAACCTCTCTAATATGAAGA+AGG | - | chr3_4:53788679-53788698 | Msa0506940:CDS | 30.0% | |
| AACCTCTCTAATATGAAGAA+GGG | - | chr3_4:53788680-53788699 | Msa0506940:CDS | 30.0% | |
| TCTAATATGAAGAAGGGATA+AGG | - | chr3_4:53788686-53788705 | Msa0506940:CDS | 30.0% | |
| ACATCACACAATACAATAAG+TGG | + | chr3_4:53788723-53788742 | None:intergenic | 30.0% | |
| TGTGATGTGATTATCATTTG+TGG | - | chr3_4:53788735-53788754 | Msa0506940:CDS | 30.0% | |
| AAAACTTCATCTCCAGTAAA+GGG | + | chr3_4:53788776-53788795 | None:intergenic | 30.0% | |
| !!! | GAATGAGAGTTTTGTTTGAG+TGG | + | chr3_4:53786478-53786497 | None:intergenic | 35.0% |
| ACACACAATAATGGTTGCTT+TGG | - | chr3_4:53786538-53786557 | Msa0506940:three_prime_UTR | 35.0% | |
| CCAGTATCAGAAATGAAAAG+GGG | + | chr3_4:53786664-53786683 | None:intergenic | 35.0% | |
| CCCAGTATCAGAAATGAAAA+GGG | + | chr3_4:53786665-53786684 | None:intergenic | 35.0% | |
| ! | CCCTTTTCATTTCTGATACT+GGG | - | chr3_4:53786662-53786681 | Msa0506940:three_prime_UTR | 35.0% |
| ACCCAGTATCAGAAATGAAA+AGG | + | chr3_4:53786666-53786685 | None:intergenic | 35.0% | |
| TCCCCAATCTTATATCTGTA+TGG | + | chr3_4:53787108-53787127 | None:intergenic | 35.0% | |
| GATTGGGGAGAAAAATTCAT+TGG | - | chr3_4:53787119-53787138 | Msa0506940:CDS | 35.0% | |
| ATAAGTTCTCAGAAAGGGAA+AGG | - | chr3_4:53787171-53787190 | Msa0506940:CDS | 35.0% | |
| TAAGTTCTCAGAAAGGGAAA+GGG | - | chr3_4:53787172-53787191 | Msa0506940:CDS | 35.0% | |
| TTGCTTACTAAATAACAGGG+AGG | - | chr3_4:53787300-53787319 | Msa0506940:intron | 35.0% | |
| ATTCTAGATACCGTAAGCAT+CGG | - | chr3_4:53787469-53787488 | Msa0506940:intron | 35.0% | |
| AATTCCTCTTGAACAAGTAG+AGG | + | chr3_4:53787740-53787759 | None:intergenic | 35.0% | |
| TCTACTTGTTCAAGAGGAAT+TGG | - | chr3_4:53787739-53787758 | Msa0506940:intron | 35.0% | |
| AAAACCTTCGTCAAAGAAGA+TGG | - | chr3_4:53787777-53787796 | Msa0506940:intron | 35.0% | |
| AAACCTTCGTCAAAGAAGAT+GGG | - | chr3_4:53787778-53787797 | Msa0506940:intron | 35.0% | |
| ! | CAAGTTTTTGACCTAAGAGA+CGG | + | chr3_4:53788192-53788211 | None:intergenic | 35.0% |
| GATTTGTGCTAATGTAAGAG+AGG | - | chr3_4:53788631-53788650 | Msa0506940:intron | 35.0% | |
| ATCCCTTCTTCATATTAGAG+AGG | + | chr3_4:53788685-53788704 | None:intergenic | 35.0% | |
| ATAAGTTCTGTTCCCTTTAC+TGG | - | chr3_4:53788761-53788780 | Msa0506940:exon | 35.0% | |
| CAAAACTTCATCTCCAGTAA+AGG | + | chr3_4:53788777-53788796 | None:intergenic | 35.0% | |
| !!! | GAATGAGAGTTTTGTTTGAG+TGG | + | chr3_4:53786478-53786497 | None:intergenic | 35.0% |
| ACACACAATAATGGTTGCTT+TGG | - | chr3_4:53786538-53786557 | Msa0506940:three_prime_UTR | 35.0% | |
| CCAGTATCAGAAATGAAAAG+GGG | + | chr3_4:53786664-53786683 | None:intergenic | 35.0% | |
| CCCAGTATCAGAAATGAAAA+GGG | + | chr3_4:53786665-53786684 | None:intergenic | 35.0% | |
| ! | CCCTTTTCATTTCTGATACT+GGG | - | chr3_4:53786662-53786681 | Msa0506940:three_prime_UTR | 35.0% |
| ACCCAGTATCAGAAATGAAA+AGG | + | chr3_4:53786666-53786685 | None:intergenic | 35.0% | |
| TCCCCAATCTTATATCTGTA+TGG | + | chr3_4:53787108-53787127 | None:intergenic | 35.0% | |
| GATTGGGGAGAAAAATTCAT+TGG | - | chr3_4:53787119-53787138 | Msa0506940:CDS | 35.0% | |
| ATAAGTTCTCAGAAAGGGAA+AGG | - | chr3_4:53787171-53787190 | Msa0506940:CDS | 35.0% | |
| TAAGTTCTCAGAAAGGGAAA+GGG | - | chr3_4:53787172-53787191 | Msa0506940:CDS | 35.0% | |
| TTGCTTACTAAATAACAGGG+AGG | - | chr3_4:53787300-53787319 | Msa0506940:intron | 35.0% | |
| ATTCTAGATACCGTAAGCAT+CGG | - | chr3_4:53787469-53787488 | Msa0506940:intron | 35.0% | |
| AATTCCTCTTGAACAAGTAG+AGG | + | chr3_4:53787740-53787759 | None:intergenic | 35.0% | |
| TCTACTTGTTCAAGAGGAAT+TGG | - | chr3_4:53787739-53787758 | Msa0506940:intron | 35.0% | |
| AAAACCTTCGTCAAAGAAGA+TGG | - | chr3_4:53787777-53787796 | Msa0506940:intron | 35.0% | |
| AAACCTTCGTCAAAGAAGAT+GGG | - | chr3_4:53787778-53787797 | Msa0506940:intron | 35.0% | |
| ! | CAAGTTTTTGACCTAAGAGA+CGG | + | chr3_4:53788192-53788211 | None:intergenic | 35.0% |
| GATTTGTGCTAATGTAAGAG+AGG | - | chr3_4:53788631-53788650 | Msa0506940:intron | 35.0% | |
| ATCCCTTCTTCATATTAGAG+AGG | + | chr3_4:53788685-53788704 | None:intergenic | 35.0% | |
| ATAAGTTCTGTTCCCTTTAC+TGG | - | chr3_4:53788761-53788780 | Msa0506940:exon | 35.0% | |
| CAAAACTTCATCTCCAGTAA+AGG | + | chr3_4:53788777-53788796 | None:intergenic | 35.0% | |
| ! | CCCCTTTTCATTTCTGATAC+TGG | - | chr3_4:53786661-53786680 | Msa0506940:three_prime_UTR | 40.0% |
| ! | TGACTTTCATTGTGGGGTTT+TGG | - | chr3_4:53786732-53786751 | Msa0506940:three_prime_UTR | 40.0% |
| CTCAGAGTTTGACAGAATCA+CGG | - | chr3_4:53786882-53786901 | Msa0506940:three_prime_UTR | 40.0% | |
| !! | GAAAGGGATGCTATTTCCAA+AGG | - | chr3_4:53787188-53787207 | Msa0506940:intron | 40.0% |
| TTACTAAATAACAGGGAGGC+TGG | - | chr3_4:53787304-53787323 | Msa0506940:intron | 40.0% | |
| TACTAAATAACAGGGAGGCT+GGG | - | chr3_4:53787305-53787324 | Msa0506940:intron | 40.0% | |
| ATCAAATCGTCCGATGCTTA+CGG | + | chr3_4:53787482-53787501 | None:intergenic | 40.0% | |
| !! | ATGTTACTATTGCTTGGTGC+AGG | - | chr3_4:53787649-53787668 | Msa0506940:intron | 40.0% |
| !! | TGTTACTATTGCTTGGTGCA+GGG | - | chr3_4:53787650-53787669 | Msa0506940:intron | 40.0% |
| TGCAGGGTAAATTGGGTAAA+TGG | - | chr3_4:53787666-53787685 | Msa0506940:intron | 40.0% | |
| GTTTCCTCTACTTGTTCAAG+AGG | - | chr3_4:53787733-53787752 | Msa0506940:intron | 40.0% | |
| TTCAAGAGGAATTGGAGTTC+TGG | - | chr3_4:53787747-53787766 | Msa0506940:intron | 40.0% | |
| !!! | CTTTGACGAAGGTTTTGTTC+AGG | + | chr3_4:53787773-53787792 | None:intergenic | 40.0% |
| TTACCCATCTTCTTTGACGA+AGG | + | chr3_4:53787784-53787803 | None:intergenic | 40.0% | |
| CAAGAGATGTTTGTCAACAC+TGG | - | chr3_4:53788134-53788153 | Msa0506940:CDS | 40.0% | |
| AGACTAGTAAACCGTCTCTT+AGG | - | chr3_4:53788178-53788197 | Msa0506940:CDS | 40.0% | |
| CGTCTCTTAGGTCAAAAACT+TGG | - | chr3_4:53788190-53788209 | Msa0506940:CDS | 40.0% | |
| CTACGTCCTCTAAATTGCAT+TGG | - | chr3_4:53788229-53788248 | Msa0506940:intron | 40.0% | |
| GCATCTCCAATGCAATTTAG+AGG | + | chr3_4:53788238-53788257 | None:intergenic | 40.0% | |
| !!! | TTTTGTGTTGCTTGAGGTTG+AGG | - | chr3_4:53788309-53788328 | Msa0506940:intron | 40.0% |
| AGGTTGAGGAGAAGAATAGT+AGG | - | chr3_4:53788323-53788342 | Msa0506940:intron | 40.0% | |
| ! | CCCCTTTTCATTTCTGATAC+TGG | - | chr3_4:53786661-53786680 | Msa0506940:three_prime_UTR | 40.0% |
| ! | TGACTTTCATTGTGGGGTTT+TGG | - | chr3_4:53786732-53786751 | Msa0506940:three_prime_UTR | 40.0% |
| CTCAGAGTTTGACAGAATCA+CGG | - | chr3_4:53786882-53786901 | Msa0506940:three_prime_UTR | 40.0% | |
| !! | GAAAGGGATGCTATTTCCAA+AGG | - | chr3_4:53787188-53787207 | Msa0506940:intron | 40.0% |
| TTACTAAATAACAGGGAGGC+TGG | - | chr3_4:53787304-53787323 | Msa0506940:intron | 40.0% | |
| TACTAAATAACAGGGAGGCT+GGG | - | chr3_4:53787305-53787324 | Msa0506940:intron | 40.0% | |
| ATCAAATCGTCCGATGCTTA+CGG | + | chr3_4:53787482-53787501 | None:intergenic | 40.0% | |
| !! | ATGTTACTATTGCTTGGTGC+AGG | - | chr3_4:53787649-53787668 | Msa0506940:intron | 40.0% |
| !! | TGTTACTATTGCTTGGTGCA+GGG | - | chr3_4:53787650-53787669 | Msa0506940:intron | 40.0% |
| TGCAGGGTAAATTGGGTAAA+TGG | - | chr3_4:53787666-53787685 | Msa0506940:intron | 40.0% | |
| GTTTCCTCTACTTGTTCAAG+AGG | - | chr3_4:53787733-53787752 | Msa0506940:intron | 40.0% | |
| TTCAAGAGGAATTGGAGTTC+TGG | - | chr3_4:53787747-53787766 | Msa0506940:intron | 40.0% | |
| !!! | CTTTGACGAAGGTTTTGTTC+AGG | + | chr3_4:53787773-53787792 | None:intergenic | 40.0% |
| TTACCCATCTTCTTTGACGA+AGG | + | chr3_4:53787784-53787803 | None:intergenic | 40.0% | |
| CAAGAGATGTTTGTCAACAC+TGG | - | chr3_4:53788134-53788153 | Msa0506940:CDS | 40.0% | |
| AGACTAGTAAACCGTCTCTT+AGG | - | chr3_4:53788178-53788197 | Msa0506940:CDS | 40.0% | |
| CGTCTCTTAGGTCAAAAACT+TGG | - | chr3_4:53788190-53788209 | Msa0506940:CDS | 40.0% | |
| CTACGTCCTCTAAATTGCAT+TGG | - | chr3_4:53788229-53788248 | Msa0506940:intron | 40.0% | |
| GCATCTCCAATGCAATTTAG+AGG | + | chr3_4:53788238-53788257 | None:intergenic | 40.0% | |
| !!! | TTTTGTGTTGCTTGAGGTTG+AGG | - | chr3_4:53788309-53788328 | Msa0506940:intron | 40.0% |
| AGGTTGAGGAGAAGAATAGT+AGG | - | chr3_4:53788323-53788342 | Msa0506940:intron | 40.0% | |
| !! | GTCACATTGGTTTCTCGTAC+TGG | - | chr3_4:53786578-53786597 | Msa0506940:three_prime_UTR | 45.0% |
| ! | AAAGGTCGTCGTCAAGTTGT+TGG | - | chr3_4:53786623-53786642 | Msa0506940:three_prime_UTR | 45.0% |
| ! | AAGGTCGTCGTCAAGTTGTT+GGG | - | chr3_4:53786624-53786643 | Msa0506940:three_prime_UTR | 45.0% |
| !! | AGCTTTGAGAGAAACCATGG+AGG | - | chr3_4:53787353-53787372 | Msa0506940:intron | 45.0% |
| !! | TTGCTTGGTGCAGGGTAAAT+TGG | - | chr3_4:53787658-53787677 | Msa0506940:intron | 45.0% |
| !! | TGCTTGGTGCAGGGTAAATT+GGG | - | chr3_4:53787659-53787678 | Msa0506940:intron | 45.0% |
| GAGATGTTTGTCAACACTGG+TGG | - | chr3_4:53788137-53788156 | Msa0506940:CDS | 45.0% | |
| ! | TCAACACTGGTGGATGAAAG+AGG | - | chr3_4:53788147-53788166 | Msa0506940:CDS | 45.0% |
| !! | GTCACATTGGTTTCTCGTAC+TGG | - | chr3_4:53786578-53786597 | Msa0506940:three_prime_UTR | 45.0% |
| ! | AAAGGTCGTCGTCAAGTTGT+TGG | - | chr3_4:53786623-53786642 | Msa0506940:three_prime_UTR | 45.0% |
| ! | AAGGTCGTCGTCAAGTTGTT+GGG | - | chr3_4:53786624-53786643 | Msa0506940:three_prime_UTR | 45.0% |
| !! | AGCTTTGAGAGAAACCATGG+AGG | - | chr3_4:53787353-53787372 | Msa0506940:intron | 45.0% |
| !! | TTGCTTGGTGCAGGGTAAAT+TGG | - | chr3_4:53787658-53787677 | Msa0506940:intron | 45.0% |
| !! | TGCTTGGTGCAGGGTAAATT+GGG | - | chr3_4:53787659-53787678 | Msa0506940:intron | 45.0% |
| GAGATGTTTGTCAACACTGG+TGG | - | chr3_4:53788137-53788156 | Msa0506940:CDS | 45.0% | |
| ! | TCAACACTGGTGGATGAAAG+AGG | - | chr3_4:53788147-53788166 | Msa0506940:CDS | 45.0% |
| !!! | AATTTTTTTTCAAAAAAAAA+TGG | + | chr3_4:53786711-53786730 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTCAAAAAAAAA+TGG | + | chr3_4:53786711-53786730 | None:intergenic | 5.0% |
| !! | GGCAGCTTTGAGAGAAACCA+TGG | - | chr3_4:53787350-53787369 | Msa0506940:intron | 50.0% |
| AGAGAAACCATGGAGGAAGC+TGG | - | chr3_4:53787360-53787379 | Msa0506940:intron | 50.0% | |
| !! | TGGTGTACGAGGCATTGTTG+AGG | - | chr3_4:53787380-53787399 | Msa0506940:intron | 50.0% |
| ! | CTGGTGGATGAAAGAGGCTT+TGG | - | chr3_4:53788153-53788172 | Msa0506940:CDS | 50.0% |
| !! | GGCAGCTTTGAGAGAAACCA+TGG | - | chr3_4:53787350-53787369 | Msa0506940:intron | 50.0% |
| AGAGAAACCATGGAGGAAGC+TGG | - | chr3_4:53787360-53787379 | Msa0506940:intron | 50.0% | |
| !! | TGGTGTACGAGGCATTGTTG+AGG | - | chr3_4:53787380-53787399 | Msa0506940:intron | 50.0% |
| ! | CTGGTGGATGAAAGAGGCTT+TGG | - | chr3_4:53788153-53788172 | Msa0506940:CDS | 50.0% |
| TCGTACACCAGCTTCCTCCA+TGG | + | chr3_4:53787370-53787389 | None:intergenic | 55.0% | |
| ATGGAGGAAGCTGGTGTACG+AGG | - | chr3_4:53787369-53787388 | Msa0506940:intron | 55.0% | |
| TCGTACACCAGCTTCCTCCA+TGG | + | chr3_4:53787370-53787389 | None:intergenic | 55.0% | |
| ATGGAGGAAGCTGGTGTACG+AGG | - | chr3_4:53787369-53787388 | Msa0506940:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 53786467 | 53788851 | 53786467 | ID=Msa0506940;Name=Msa0506940 |
| chr3_4 | mRNA | 53786467 | 53788851 | 53786467 | ID=Msa0506940-mRNA-1;Parent=Msa0506940;Name=Msa0506940-mRNA-1;_AED=0.16;_eAED=0.16;_QI=81|1|1|1|1|1|5|569|195 |
| chr3_4 | exon | 53786467 | 53787200 | 53786467 | ID=Msa0506940-mRNA-1:exon:11938;Parent=Msa0506940-mRNA-1 |
| chr3_4 | exon | 53787519 | 53787647 | 53787519 | ID=Msa0506940-mRNA-1:exon:11937;Parent=Msa0506940-mRNA-1 |
| chr3_4 | exon | 53787917 | 53788000 | 53787917 | ID=Msa0506940-mRNA-1:exon:11936;Parent=Msa0506940-mRNA-1 |
| chr3_4 | exon | 53788109 | 53788220 | 53788109 | ID=Msa0506940-mRNA-1:exon:11935;Parent=Msa0506940-mRNA-1 |
| chr3_4 | exon | 53788673 | 53788851 | 53788673 | ID=Msa0506940-mRNA-1:exon:11934;Parent=Msa0506940-mRNA-1 |
| chr3_4 | five_prime_UTR | 53788771 | 53788851 | 53788771 | ID=Msa0506940-mRNA-1:five_prime_utr;Parent=Msa0506940-mRNA-1 |
| chr3_4 | CDS | 53788673 | 53788770 | 53788673 | ID=Msa0506940-mRNA-1:cds;Parent=Msa0506940-mRNA-1 |
| chr3_4 | CDS | 53788109 | 53788220 | 53788109 | ID=Msa0506940-mRNA-1:cds;Parent=Msa0506940-mRNA-1 |
| chr3_4 | CDS | 53787917 | 53788000 | 53787917 | ID=Msa0506940-mRNA-1:cds;Parent=Msa0506940-mRNA-1 |
| chr3_4 | CDS | 53787519 | 53787647 | 53787519 | ID=Msa0506940-mRNA-1:cds;Parent=Msa0506940-mRNA-1 |
| chr3_4 | CDS | 53787036 | 53787200 | 53787036 | ID=Msa0506940-mRNA-1:cds;Parent=Msa0506940-mRNA-1 |
| chr3_4 | three_prime_UTR | 53786467 | 53787035 | 53786467 | ID=Msa0506940-mRNA-1:three_prime_utr;Parent=Msa0506940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
