AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1360890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360890 MtrunA17_Chr3g0130781 99.720 357 1 0 7 363 108 464 0.0 745
Msa1360890 MtrunA17_Chr8g0377071 44.068 236 112 5 14 245 475 694 3.56e-59 203
Msa1360890 MtrunA17_Chr4g0057791 44.395 223 100 6 25 243 321 523 4.51e-56 191
Msa1360890 MtrunA17_Chr3g0122781 41.434 251 112 6 14 245 506 740 4.43e-55 192
Msa1360890 MtrunA17_Chr4g0051261 43.750 208 98 6 21 228 100 288 4.42e-50 169
Msa1360890 MtrunA17_Chr2g0293491 43.415 205 95 6 25 228 104 288 3.03e-49 167
Msa1360890 MtrunA17_Chr6g0483151 42.584 209 99 5 25 233 113 300 6.34e-48 167
Msa1360890 MtrunA17_Chr1g0187371 39.738 229 113 6 1 227 103 308 9.25e-48 164
Msa1360890 MtrunA17_Chr4g0002001 38.596 228 119 6 1 227 96 303 2.20e-45 157
Msa1360890 MtrunA17_Chr3g0099951 39.189 222 111 7 13 233 104 302 2.23e-42 152
Msa1360890 MtrunA17_Chr4g0040141 38.589 241 120 8 25 264 230 443 3.70e-42 156
Msa1360890 MtrunA17_Chr3g0093391 40.639 219 105 6 25 243 138 331 4.88e-41 150
Msa1360890 MtrunA17_Chr3g0093571 40.639 219 105 6 25 243 140 333 6.49e-41 150
Msa1360890 MtrunA17_Chr2g0324461 37.083 240 125 7 25 264 242 455 8.23e-41 152
Msa1360890 MtrunA17_Chr4g0061141 37.959 245 124 8 19 262 200 417 8.85e-39 146
Msa1360890 MtrunA17_Chr2g0317501 32.416 327 184 11 20 339 230 526 1.08e-38 146
Msa1360890 MtrunA17_Chr8g0358921 38.710 217 109 8 14 227 140 335 2.68e-38 140
Msa1360890 MtrunA17_Chr8g0378831 40.693 231 103 7 4 226 114 318 2.95e-38 140
Msa1360890 MtrunA17_Chr3g0141871 37.069 232 126 5 11 240 121 334 4.63e-38 140
Msa1360890 MtrunA17_Chr5g0396361 37.727 220 109 8 25 243 241 433 6.18e-38 143
Msa1360890 MtrunA17_Chr3g0131861 39.269 219 114 6 25 243 198 397 1.05e-37 142
Msa1360890 MtrunA17_Chr8g0387401 39.908 218 110 7 11 227 141 338 5.62e-37 137
Msa1360890 MtrunA17_Chr4g0066691 31.646 316 173 11 25 333 205 484 1.23e-36 139
Msa1360890 MtrunA17_Chr4g0030151 39.556 225 103 8 11 228 128 326 1.48e-36 135
Msa1360890 MtrunA17_Chr5g0397261 40.553 217 110 6 11 227 130 327 2.12e-36 135
Msa1360890 MtrunA17_Chr7g0248461 38.532 218 113 7 11 227 127 324 6.49e-36 134
Msa1360890 MtrunA17_Chr4g0045841 37.156 218 115 7 11 227 144 340 1.86e-35 133
Msa1360890 MtrunA17_Chr8g0369451 39.706 204 102 7 25 228 102 284 2.67e-35 134
Msa1360890 MtrunA17_Chr6g0453711 35.573 253 136 8 25 277 211 436 5.30e-35 135
Msa1360890 MtrunA17_Chr2g0286421 38.462 208 107 7 25 231 203 390 6.71e-35 134
Msa1360890 MtrunA17_Chr8g0385971 36.364 220 119 7 25 243 191 390 1.37e-34 133
Msa1360890 MtrunA17_Chr7g0218071 38.249 217 114 7 25 240 221 418 2.10e-34 134
Msa1360890 MtrunA17_Chr3g0102571 40.394 203 102 4 24 226 182 365 2.62e-34 130
Msa1360890 MtrunA17_Chr2g0284091 36.325 234 124 9 9 240 125 335 1.26e-33 128
Msa1360890 MtrunA17_Chr7g0273601 32.824 262 138 9 25 282 208 435 2.25e-33 130
Msa1360890 MtrunA17_Chr5g0409421 37.745 204 106 7 25 228 102 284 2.68e-33 128
Msa1360890 MtrunA17_Chr8g0339221 35.426 223 124 5 20 242 97 299 2.82e-33 128
Msa1360890 MtrunA17_Chr4g0030231 37.264 212 110 7 17 226 135 325 4.24e-33 126
Msa1360890 MtrunA17_Chr8g0350311 38.500 200 100 8 30 227 245 423 4.60e-33 128
Msa1360890 MtrunA17_Chr7g0246591 35.470 234 126 9 9 240 226 436 5.36e-33 128
Msa1360890 MtrunA17_Chr8g0348481 37.327 217 115 7 11 226 126 322 6.30e-33 126
Msa1360890 MtrunA17_Chr2g0320011 35.043 234 127 9 9 240 173 383 1.65e-32 126
Msa1360890 MtrunA17_Chr1g0191221 34.764 233 126 7 25 257 223 429 2.33e-32 127
Msa1360890 MtrunA17_Chr1g0193081 34.043 235 129 9 8 240 160 370 6.43e-32 124
Msa1360890 MtrunA17_Chr7g0270371 33.784 222 123 8 8 227 160 359 3.40e-31 122
Msa1360890 MtrunA17_Chr1g0194201 35.135 222 120 8 8 227 160 359 1.01e-30 120
Msa1360890 MtrunA17_Chr3g0102601 38.426 216 98 6 12 227 24 204 2.01e-30 116
Msa1360890 MtrunA17_Chr4g0065851 35.802 243 122 9 3 233 106 326 2.49e-30 121
Msa1360890 MtrunA17_Chr2g0287271 35.470 234 121 6 3 228 106 317 1.31e-29 119
Msa1360890 MtrunA17_Chr1g0201571 34.783 207 114 5 25 231 227 412 1.19e-28 117
Msa1360890 MtrunA17_Chr8g0392811 35.470 234 119 9 3 227 198 408 2.74e-28 115
Msa1360890 MtrunA17_Chr8g0383451 35.814 215 115 7 18 231 92 284 3.99e-28 114
Msa1360890 MtrunA17_Chr8g0359091 36.929 241 108 8 3 228 107 318 7.06e-28 114
Msa1360890 MtrunA17_Chr2g0277011 33.484 221 124 8 9 227 175 374 9.81e-28 112
Msa1360890 MtrunA17_Chr5g0443351 35.102 245 119 9 11 243 111 327 2.02e-27 112
Msa1360890 MtrunA17_Chr4g0030241 43.066 137 63 4 24 160 3 124 2.92e-27 106
Msa1360890 MtrunA17_Chr3g0096631 34.387 253 126 8 3 243 106 330 3.11e-27 112
Msa1360890 MtrunA17_Chr4g0053821 34.562 217 115 8 19 227 177 374 1.32e-26 109
Msa1360890 MtrunA17_Chr6g0482681 36.555 238 111 9 3 227 170 380 3.42e-26 109
Msa1360890 MtrunA17_Chr5g0401371 31.915 235 113 10 19 237 203 406 4.12e-26 108
Msa1360890 MtrunA17_Chr4g0053951 31.250 224 129 8 19 237 208 411 1.92e-23 100
Msa1360890 MtrunA17_Chr6g0486031 37.931 145 78 2 89 233 274 406 2.78e-23 100
Msa1360890 MtrunA17_Chr8g0390341 40.136 147 72 5 89 233 287 419 3.13e-23 100
Msa1360890 MtrunA17_Chr2g0314321 32.669 251 122 8 3 228 106 334 8.67e-23 99.8
Msa1360890 MtrunA17_Chr1g0202831 27.602 221 112 5 20 240 508 680 3.77e-18 86.3
Msa1360890 MtrunA17_Chr3g0139371 30.000 240 106 9 31 229 182 400 9.63e-18 84.0
Msa1360890 MtrunA17_Chr8g0369241 37.984 129 58 4 31 155 249 359 1.09e-17 84.7
Msa1360890 MtrunA17_Chr5g0437131 31.220 205 118 7 28 224 513 702 1.75e-16 80.9
Msa1360890 MtrunA17_Chr3g0129721 41.525 118 64 4 15 132 114 226 3.90e-16 77.8
Msa1360890 MtrunA17_Chr1g0170551 34.254 181 89 8 25 187 105 273 9.31e-16 79.0
Msa1360890 MtrunA17_Chr8g0386981 35.780 109 63 2 20 128 505 606 1.89e-15 77.8
Msa1360890 MtrunA17_Chr5g0402601 34.921 126 65 4 9 128 463 577 3.19e-15 77.0
Msa1360890 MtrunA17_Chr4g0051191 29.907 214 91 8 20 228 259 418 3.22e-15 76.6
Msa1360890 MtrunA17_Chr7g0245031 36.752 117 66 3 31 147 254 362 6.17e-15 75.9
Msa1360890 MtrunA17_Chr8g0384301 26.471 204 102 5 25 228 401 556 7.64e-15 75.9
Msa1360890 MtrunA17_Chr1g0190131 30.622 209 98 7 16 224 100 261 7.67e-15 73.9
Msa1360890 MtrunA17_Chr1g0205931 36.364 110 65 2 19 128 154 258 1.03e-14 75.5
Msa1360890 MtrunA17_Chr7g0272841 37.383 107 62 2 22 128 170 271 1.37e-14 75.1
Msa1360890 MtrunA17_Chr2g0286501 41.026 117 56 4 24 134 142 251 1.55e-14 75.5
Msa1360890 MtrunA17_Chr1g0185221 38.393 112 61 4 29 140 110 213 1.89e-14 74.7
Msa1360890 MtrunA17_Chr7g0256001 28.571 203 92 8 26 224 247 400 2.13e-14 74.3
Msa1360890 MtrunA17_Chr5g0424651 43.689 103 47 4 25 125 421 514 2.33e-14 74.3
Msa1360890 MtrunA17_Chr3g0130151 37.500 104 58 2 25 128 346 442 3.25e-14 73.9
Msa1360890 MtrunA17_Chr1g0203881 30.097 206 99 8 26 231 143 303 3.93e-14 73.6
Msa1360890 MtrunA17_Chr5g0424581 36.957 138 64 6 31 154 231 359 4.10e-14 73.2
Msa1360890 MtrunA17_Chr1g0190831 39.450 109 58 4 29 137 110 210 4.15e-14 73.6
Msa1360890 MtrunA17_Chr4g0008561 37.209 129 62 6 8 132 107 220 4.40e-14 73.6
Msa1360890 MtrunA17_Chr5g0428981 26.556 241 101 8 19 228 857 1052 7.53e-14 73.2
Msa1360890 MtrunA17_Chr5g0424501 36.232 138 65 6 31 154 298 426 1.74e-13 71.2
Msa1360890 MtrunA17_Chr2g0276831 24.670 227 118 6 15 227 101 288 1.88e-13 70.9
Msa1360890 MtrunA17_Chr5g0424531 45.361 97 42 5 31 125 122 209 3.62e-13 69.3
Msa1360890 MtrunA17_Chr2g0321841 37.815 119 57 5 29 147 110 211 7.14e-13 70.1
Msa1360890 MtrunA17_Chr4g0059751 39.000 100 53 3 31 130 202 293 9.48e-13 68.9
Msa1360890 MtrunA17_Chr8g0360761 31.618 136 63 3 95 229 80 186 1.55e-12 65.9
Msa1360890 MtrunA17_Chr4g0052961 30.000 210 111 8 18 205 140 335 1.58e-12 68.2
Msa1360890 MtrunA17_Chr4g0000481 27.442 215 91 8 25 227 178 339 1.95e-12 67.8
Msa1360890 MtrunA17_Chr3g0115171 40.777 103 50 4 25 125 383 476 1.98e-12 68.2
Msa1360890 MtrunA17_Chr7g0258051 36.522 115 63 4 29 142 122 227 4.14e-12 67.4
Msa1360890 MtrunA17_Chr6g0479211 34.513 113 64 3 15 123 146 252 5.01e-12 66.2
Msa1360890 MtrunA17_Chr1g0205071 33.898 118 67 4 6 123 186 292 1.94e-11 64.7
Msa1360890 MtrunA17_Chr4g0052981 38.739 111 54 6 18 128 103 199 2.82e-11 63.9
Msa1360890 MtrunA17_Chr1g0157231 44.086 93 44 3 35 127 253 337 3.55e-11 63.9
Msa1360890 MtrunA17_Chr3g0115051 25.472 212 110 8 4 179 475 674 3.60e-11 64.7
Msa1360890 MtrunA17_Chr8g0375141 39.640 111 53 6 18 128 142 238 4.08e-11 63.9
Msa1360890 MtrunA17_Chr3g0101111 36.364 121 66 5 9 127 114 225 8.38e-11 62.4
Msa1360890 MtrunA17_Chr2g0288841 33.117 154 77 4 31 170 110 251 9.19e-11 62.8
Msa1360890 MtrunA17_Chr3g0101091 36.364 121 66 5 9 127 114 225 9.54e-11 62.0
Msa1360890 MtrunA17_Chr3g0101081 36.364 121 66 5 9 127 114 225 9.54e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360890 AT5G63610.1 72.329 365 86 9 7 363 113 470 0.0 529
Msa1360890 AT1G67580.1 43.644 236 113 5 14 245 496 715 1.45e-58 202
Msa1360890 AT1G67580.2 43.644 236 113 5 14 245 496 715 1.45e-58 202
Msa1360890 AT5G63370.2 42.259 239 118 5 9 243 253 475 4.98e-54 185
Msa1360890 AT5G63370.3 42.259 239 118 5 9 243 253 475 4.98e-54 185
Msa1360890 AT5G63370.7 42.259 239 118 5 9 243 387 609 2.10e-53 186
Msa1360890 AT5G63370.8 42.259 239 118 5 9 243 387 609 2.10e-53 186
Msa1360890 AT5G63370.4 42.259 239 118 5 9 243 387 609 2.10e-53 186
Msa1360890 AT5G63370.6 42.259 239 118 5 9 243 387 609 2.10e-53 186
Msa1360890 AT5G63370.1 42.259 239 118 5 9 243 387 609 2.10e-53 186
Msa1360890 AT1G18040.1 44.037 218 97 5 25 240 111 305 2.62e-51 176
Msa1360890 AT1G20930.1 41.150 226 112 6 2 227 102 306 3.30e-51 173
Msa1360890 AT1G76540.1 40.517 232 117 6 1 232 99 309 4.41e-50 170
Msa1360890 AT1G73690.1 43.049 223 101 6 13 233 99 297 8.15e-50 172
Msa1360890 AT3G48750.1 41.441 222 108 7 9 228 87 288 4.14e-49 167
Msa1360890 AT1G66750.1 37.553 237 124 6 13 247 101 315 3.71e-48 166
Msa1360890 AT5G63370.9 50.617 162 66 3 9 170 253 400 2.52e-47 166
Msa1360890 AT5G63370.5 50.617 162 66 3 9 170 387 534 6.47e-47 167
Msa1360890 AT5G63370.10 50.617 162 66 3 9 170 387 534 6.47e-47 167
Msa1360890 AT3G54180.1 38.428 229 118 8 1 227 94 301 2.48e-46 160
Msa1360890 AT2G38620.4 38.767 227 117 7 2 227 36 241 2.58e-46 159
Msa1360890 AT2G38620.2 38.865 229 117 8 1 227 96 303 3.15e-46 160
Msa1360890 AT3G45640.1 37.692 260 126 11 4 256 120 350 1.07e-40 147
Msa1360890 AT5G64960.2 40.000 220 105 6 25 243 88 281 1.23e-40 149
Msa1360890 AT5G64960.1 40.000 220 105 6 25 243 141 334 2.07e-40 149
Msa1360890 AT5G10270.1 39.726 219 107 6 25 243 141 334 1.80e-39 146
Msa1360890 AT5G44290.2 37.179 234 117 6 25 256 238 443 3.96e-38 144
Msa1360890 AT5G44290.5 37.179 234 117 6 25 256 238 443 3.96e-38 144
Msa1360890 AT5G44290.4 37.179 234 117 6 25 256 238 443 3.96e-38 144
Msa1360890 AT5G44290.1 37.179 234 117 6 25 256 238 443 3.96e-38 144
Msa1360890 AT5G44290.3 37.179 234 117 6 25 256 238 443 3.96e-38 144
Msa1360890 AT1G03740.1 36.653 251 125 7 25 273 314 532 4.63e-38 145
Msa1360890 AT4G36450.1 36.653 251 125 9 15 263 125 343 5.30e-38 140
Msa1360890 AT5G44290.6 37.179 234 117 6 25 256 238 443 5.32e-38 144
Msa1360890 AT1G03740.2 36.653 251 125 7 25 273 314 532 5.51e-38 144
Msa1360890 AT5G44290.7 37.179 234 117 6 25 256 238 443 8.12e-38 142
Msa1360890 AT1G74330.3 37.083 240 113 9 25 257 222 430 1.45e-37 143
Msa1360890 AT4G22940.1 35.271 258 142 7 25 278 205 441 1.61e-37 140
Msa1360890 AT1G74330.2 37.083 240 113 9 25 257 222 430 2.10e-37 143
Msa1360890 AT4G10010.1 38.813 219 115 6 25 243 77 276 2.18e-37 140
Msa1360890 AT1G74330.1 37.083 240 113 9 25 257 222 430 2.43e-37 142
Msa1360890 AT4G22940.2 35.271 258 142 7 25 278 205 441 3.04e-37 141
Msa1360890 AT1G53050.2 35.802 243 120 7 20 257 230 441 3.30e-37 142
Msa1360890 AT1G53050.1 35.802 243 120 7 20 257 230 441 3.30e-37 142
Msa1360890 AT1G18670.1 34.432 273 143 8 25 296 232 469 3.35e-37 142
Msa1360890 AT1G18670.2 34.432 273 143 8 25 296 232 469 3.59e-37 142
Msa1360890 AT1G18670.3 34.432 273 143 8 25 296 232 469 3.67e-37 142
Msa1360890 AT4G11330.1 40.092 217 111 6 11 227 132 329 4.30e-37 137
Msa1360890 AT1G10210.2 38.793 232 122 5 11 242 121 332 4.57e-37 137
Msa1360890 AT1G10210.3 38.793 232 122 5 11 242 121 332 4.57e-37 137
Msa1360890 AT1G10210.1 38.793 232 122 5 11 242 121 332 4.57e-37 137
Msa1360890 AT5G50860.2 37.555 229 124 6 25 253 215 424 5.14e-37 140
Msa1360890 AT5G50860.1 37.555 229 124 6 25 253 215 424 6.20e-37 140
Msa1360890 AT3G01085.3 33.766 308 163 10 25 320 216 494 7.45e-37 141
Msa1360890 AT3G01085.1 33.766 308 163 10 25 320 216 494 8.03e-37 140
Msa1360890 AT3G01085.2 33.766 308 163 10 25 320 216 494 8.03e-37 140
Msa1360890 AT2G18170.1 38.496 226 121 4 11 236 121 328 9.84e-37 136
Msa1360890 AT4G10010.2 37.946 224 120 6 20 243 252 456 1.15e-36 140
Msa1360890 AT1G54610.1 32.500 280 155 9 20 296 214 462 2.66e-36 139
Msa1360890 AT1G54610.3 32.500 280 155 9 20 296 214 462 2.66e-36 139
Msa1360890 AT1G54610.2 32.500 280 155 9 20 296 214 462 2.66e-36 139
Msa1360890 AT1G71530.1 37.443 219 118 6 25 243 248 447 3.12e-36 139
Msa1360890 AT4G19110.3 37.391 230 120 8 1 228 21 228 3.52e-36 136
Msa1360890 AT1G33770.1 38.356 219 116 5 25 243 242 441 3.80e-36 139
Msa1360890 AT1G71530.2 37.443 219 118 6 25 243 248 447 5.40e-36 136
Msa1360890 AT4G13020.7 39.524 210 102 6 25 232 102 288 1.74e-35 133
Msa1360890 AT4G19110.1 37.391 230 120 8 1 228 77 284 1.77e-35 135
Msa1360890 AT4G19110.2 37.391 230 120 8 1 228 77 284 1.77e-35 135
Msa1360890 AT3G59790.1 36.726 226 119 7 4 227 142 345 1.95e-35 134
Msa1360890 AT4G13020.8 39.524 210 102 6 25 232 111 297 2.40e-35 133
Msa1360890 AT1G59580.2 37.168 226 124 4 11 236 121 328 2.61e-35 133
Msa1360890 AT1G59580.1 37.168 226 124 4 11 236 121 328 2.61e-35 133
Msa1360890 AT4G13020.6 39.524 210 102 6 25 232 102 288 2.75e-35 133
Msa1360890 AT4G13020.1 39.524 210 102 6 25 232 102 288 2.96e-35 134
Msa1360890 AT4G13020.4 39.524 210 102 6 25 232 102 288 3.13e-35 133
Msa1360890 AT4G13020.5 39.524 210 102 6 25 232 111 297 3.98e-35 134
Msa1360890 AT1G01560.2 37.168 226 105 7 11 227 129 326 4.21e-35 132
Msa1360890 AT4G13020.2 39.524 210 102 6 25 232 110 296 4.48e-35 134
Msa1360890 AT4G13020.3 39.524 210 102 6 25 232 110 296 4.54e-35 134
Msa1360890 AT2G46070.1 37.719 228 114 8 2 227 126 327 5.47e-35 132
Msa1360890 AT2G46070.3 37.719 228 114 8 2 227 160 361 6.30e-35 132
Msa1360890 AT2G43790.1 34.440 241 104 7 4 227 145 348 1.71e-34 131
Msa1360890 AT5G39420.1 37.900 219 117 7 25 243 206 405 1.95e-34 134
Msa1360890 AT5G45430.2 39.512 205 101 7 25 228 102 284 2.46e-34 132
Msa1360890 AT5G45430.1 39.512 205 101 7 25 228 102 284 2.84e-34 132
Msa1360890 AT4G01370.1 36.134 238 105 7 4 227 125 329 1.26e-33 128
Msa1360890 AT1G01560.3 37.333 225 103 8 11 226 129 324 9.83e-33 125
Msa1360890 AT2G46070.2 37.220 223 112 8 2 222 126 322 1.36e-32 124
Msa1360890 AT1G71530.3 37.811 201 106 6 25 225 248 429 4.80e-32 125
Msa1360890 AT4G18710.1 35.498 231 124 9 12 240 128 335 5.72e-32 124
Msa1360890 AT2G30980.1 35.043 234 127 9 9 240 157 367 5.78e-32 124
Msa1360890 AT1G06390.2 35.319 235 126 10 8 240 155 365 5.94e-32 124
Msa1360890 AT1G06390.1 35.319 235 126 10 8 240 155 365 5.94e-32 124
Msa1360890 AT2G38620.3 39.355 155 80 4 1 154 96 237 8.92e-32 120
Msa1360890 AT2G38620.1 39.355 155 80 4 1 154 96 237 8.92e-32 120
Msa1360890 AT4G00720.1 36.239 218 116 9 12 227 226 422 1.13e-31 124
Msa1360890 AT1G07880.2 35.616 219 118 7 11 227 122 319 3.64e-31 121
Msa1360890 AT5G19010.1 36.752 234 118 7 3 228 106 317 7.63e-31 123
Msa1360890 AT3G61160.1 36.744 215 113 9 15 227 193 386 1.20e-30 121
Msa1360890 AT3G05840.2 33.617 235 130 9 8 240 158 368 1.29e-30 120
Msa1360890 AT3G05840.1 33.617 235 130 9 8 240 158 368 1.29e-30 120
Msa1360890 AT2G01450.3 36.170 235 118 8 3 228 97 308 1.73e-30 121
Msa1360890 AT2G01450.1 36.170 235 118 8 3 228 97 308 1.73e-30 121
Msa1360890 AT2G01450.2 36.170 235 118 8 3 228 97 308 1.73e-30 121
Msa1360890 AT2G01450.4 36.170 235 118 8 3 228 97 308 1.73e-30 121
Msa1360890 AT3G61160.4 36.744 215 113 9 15 227 193 386 1.79e-30 120
Msa1360890 AT3G61160.2 36.744 215 113 9 15 227 200 393 1.80e-30 120
Msa1360890 AT5G14640.1 33.484 221 124 7 9 227 159 358 1.83e-30 120
Msa1360890 AT5G14640.2 33.484 221 124 7 9 227 159 358 1.83e-30 120
Msa1360890 AT1G09600.1 35.178 253 127 9 19 259 258 485 2.55e-30 122
Msa1360890 AT5G26751.1 33.617 235 130 9 8 240 154 364 4.08e-30 119
Msa1360890 AT3G05050.3 33.047 233 133 6 25 257 239 448 3.23e-29 119
Msa1360890 AT3G05050.2 33.047 233 133 6 25 257 239 448 3.23e-29 119
Msa1360890 AT3G05050.1 33.047 233 133 6 25 257 239 448 3.23e-29 119
Msa1360890 AT1G57870.1 34.649 228 124 9 15 240 173 377 3.30e-29 117
Msa1360890 AT1G57870.4 34.649 228 124 9 15 240 173 377 3.30e-29 117
Msa1360890 AT1G57870.2 34.649 228 124 9 15 240 173 377 3.30e-29 117
Msa1360890 AT1G57870.3 34.649 228 124 9 15 240 173 377 4.37e-29 117
Msa1360890 AT3G14720.1 36.145 249 127 8 3 243 106 330 5.75e-29 118
Msa1360890 AT3G14720.2 36.145 249 127 8 3 243 106 330 1.59e-28 115
Msa1360890 AT3G14720.3 36.145 249 127 8 3 243 106 330 1.59e-28 115
Msa1360890 AT1G09840.11 33.796 216 120 8 14 227 46 240 1.77e-28 112
Msa1360890 AT3G61160.5 36.538 208 109 9 15 220 193 379 2.15e-28 114
Msa1360890 AT1G73670.1 36.481 233 118 8 3 227 171 381 2.26e-28 116
Msa1360890 AT1G01560.4 45.968 124 60 3 11 134 129 245 5.88e-28 110
Msa1360890 AT1G01560.1 45.968 124 60 3 11 134 129 245 5.88e-28 110
Msa1360890 AT1G57700.1 36.957 230 123 8 20 247 242 451 9.06e-28 115
Msa1360890 AT1G09840.3 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.7 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.10 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.6 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.4 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.1 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.9 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.5 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.8 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT1G09840.2 33.953 215 119 8 15 227 174 367 1.59e-27 112
Msa1360890 AT3G18040.2 36.481 233 118 9 3 227 16 226 5.29e-27 111
Msa1360890 AT3G18040.5 36.481 233 118 9 3 227 99 309 3.50e-26 109
Msa1360890 AT3G18040.1 36.481 233 118 9 3 227 104 314 3.65e-26 109
Msa1360890 AT2G42880.1 33.858 254 126 9 3 243 106 330 5.27e-26 109
Msa1360890 AT3G18040.4 36.052 233 119 8 3 227 213 423 6.82e-26 109
Msa1360890 AT2G42880.2 33.858 254 126 9 3 243 106 330 7.16e-26 108
Msa1360890 AT3G61160.3 38.994 159 80 6 15 172 193 335 1.08e-25 106
Msa1360890 AT3G18040.3 36.052 233 119 8 3 227 213 423 1.11e-25 108
Msa1360890 AT5G67380.2 33.641 217 117 8 19 227 165 362 1.16e-25 106
Msa1360890 AT5G67380.1 33.641 217 117 8 19 227 198 395 1.35e-25 107
Msa1360890 AT3G61160.6 38.994 159 80 6 15 172 200 342 1.56e-25 106
Msa1360890 AT1G07880.1 42.742 124 64 3 11 134 122 238 1.56e-25 103
Msa1360890 AT3G50000.1 33.641 217 117 8 19 227 192 389 1.97e-25 106
Msa1360890 AT2G23080.1 33.333 219 115 9 19 227 122 319 2.04e-25 105
Msa1360890 AT1G53510.1 34.211 228 132 5 3 228 106 317 2.11e-25 107
Msa1360890 AT1G18150.3 36.975 238 110 9 3 227 185 395 5.88e-25 106
Msa1360890 AT1G18150.2 36.975 238 110 9 3 227 185 395 5.88e-25 106
Msa1360890 AT1G18150.1 36.975 238 110 9 3 227 185 395 5.88e-25 106
Msa1360890 AT4G18710.2 39.735 151 76 5 12 161 122 258 8.78e-25 102
Msa1360890 AT2G23070.1 32.287 223 128 7 19 237 220 423 5.62e-24 102
Msa1360890 AT1G71530.4 44.538 119 60 3 25 142 248 361 5.76e-24 101
Msa1360890 AT1G63700.1 28.958 259 126 8 20 269 497 706 4.68e-20 92.4
Msa1360890 AT1G63700.2 28.958 259 126 8 20 269 497 706 4.68e-20 92.4
Msa1360890 AT4G28980.3 32.000 200 112 6 89 279 292 476 7.08e-20 91.3
Msa1360890 AT4G28980.1 32.000 200 112 6 89 279 292 476 7.08e-20 91.3
Msa1360890 AT4G28980.2 32.000 200 112 6 89 279 292 476 7.08e-20 91.3
Msa1360890 AT1G53570.4 29.048 210 101 5 19 228 310 471 1.04e-17 85.1
Msa1360890 AT1G53570.1 29.048 210 101 5 19 228 310 471 1.09e-17 85.1
Msa1360890 AT1G53570.2 29.048 210 101 5 19 228 310 471 1.13e-17 84.7
Msa1360890 AT1G53570.3 29.048 210 101 5 19 228 310 471 1.13e-17 84.7
Msa1360890 AT1G53570.7 29.048 210 101 5 19 228 310 471 1.65e-17 84.3
Msa1360890 AT1G53570.6 29.048 210 101 5 19 228 310 471 1.75e-17 84.0
Msa1360890 AT2G23080.2 33.108 148 78 6 19 162 122 252 3.18e-17 81.6
Msa1360890 AT3G06030.1 29.767 215 102 7 31 241 179 348 1.28e-16 81.6
Msa1360890 AT2G40120.1 29.907 214 125 7 20 224 363 560 1.32e-16 81.6
Msa1360890 AT1G12680.1 30.457 197 89 6 28 224 204 352 1.93e-16 80.9
Msa1360890 AT1G54510.4 41.964 112 57 4 29 140 110 213 9.12e-16 79.0
Msa1360890 AT1G54510.2 41.964 112 57 4 29 140 110 213 9.12e-16 79.0
Msa1360890 AT1G54510.1 41.964 112 57 4 29 140 110 213 9.12e-16 79.0
Msa1360890 AT1G54510.3 41.964 112 57 4 29 140 110 213 9.12e-16 79.0
Msa1360890 AT5G35980.1 35.664 143 75 5 15 155 214 341 9.42e-16 79.3
Msa1360890 AT5G35980.3 35.664 143 75 5 15 155 179 306 9.64e-16 79.3
Msa1360890 AT1G50240.3 33.152 184 93 8 25 190 104 275 1.44e-15 79.0
Msa1360890 AT1G50240.2 33.152 184 93 8 25 190 104 275 1.44e-15 79.0
Msa1360890 AT5G35980.2 35.664 143 75 5 15 155 214 341 1.63e-15 78.6
Msa1360890 AT5G66850.1 28.000 250 107 10 9 249 437 622 1.99e-15 78.2
Msa1360890 AT5G66850.2 28.000 250 107 10 9 249 437 622 2.60e-15 77.8
Msa1360890 AT3G17750.1 30.000 210 120 8 25 224 934 1126 4.01e-15 77.4
Msa1360890 AT1G49180.2 43.363 113 59 4 20 132 101 208 5.63e-15 75.9
Msa1360890 AT5G18700.1 31.915 188 108 7 22 202 95 269 5.70e-15 77.0
Msa1360890 AT1G49180.1 43.363 113 59 4 20 132 101 208 6.72e-15 75.9
Msa1360890 AT4G24740.6 28.085 235 126 9 25 227 97 320 7.60e-15 75.1
Msa1360890 AT4G24740.9 28.085 235 126 9 25 227 97 320 7.60e-15 75.1
Msa1360890 AT4G24740.2 28.085 235 126 9 25 227 97 320 7.60e-15 75.1
Msa1360890 AT4G24740.1 27.426 237 125 9 25 227 200 423 9.44e-15 75.5
Msa1360890 AT3G63280.2 35.256 156 84 6 29 177 110 255 1.13e-14 75.5
Msa1360890 AT3G63280.3 35.256 156 84 6 29 177 110 255 1.13e-14 75.5
Msa1360890 AT3G63280.1 35.256 156 84 6 29 177 110 255 1.13e-14 75.5
Msa1360890 AT4G24740.7 27.426 237 125 9 25 227 162 385 1.21e-14 75.1
Msa1360890 AT4G21940.2 27.404 208 106 7 28 235 206 368 1.39e-14 75.5
Msa1360890 AT4G21940.3 27.404 208 106 7 28 235 206 368 1.41e-14 75.1
Msa1360890 AT4G21940.1 27.404 208 106 7 28 235 206 368 1.47e-14 75.5
Msa1360890 AT3G63280.4 35.256 156 84 6 29 177 164 309 1.63e-14 75.1
Msa1360890 AT5G28290.3 35.417 144 78 5 29 165 110 245 1.79e-14 75.1
Msa1360890 AT5G28290.1 35.417 144 78 5 29 165 110 245 1.80e-14 75.1
Msa1360890 AT5G28290.2 35.417 144 78 5 29 165 110 245 1.80e-14 75.1
Msa1360890 AT1G48490.4 27.660 235 99 9 20 228 924 1113 1.95e-14 75.5
Msa1360890 AT1G48490.3 27.660 235 99 9 20 228 923 1112 2.04e-14 75.5
Msa1360890 AT1G48490.2 27.660 235 99 9 20 228 923 1112 2.04e-14 75.5
Msa1360890 AT1G48490.1 27.660 235 99 9 20 228 923 1112 2.04e-14 75.5
Msa1360890 AT2G41140.1 29.817 218 97 10 14 224 214 382 2.23e-14 74.7
Msa1360890 AT3G04810.2 34.028 144 80 5 29 165 110 245 3.38e-14 74.3
Msa1360890 AT3G04810.1 34.028 144 80 5 29 165 110 245 3.38e-14 74.3
Msa1360890 AT3G04810.3 34.028 144 80 5 29 165 110 245 3.38e-14 74.3
Msa1360890 AT3G56760.1 29.817 218 97 10 14 224 215 383 4.10e-14 73.9
Msa1360890 AT1G54960.1 30.288 208 94 8 22 226 170 329 4.80e-14 73.9
Msa1360890 AT1G54960.2 30.288 208 94 8 22 226 170 329 4.80e-14 73.9
Msa1360890 AT3G53640.1 27.542 236 129 10 16 227 422 639 1.07e-13 72.8
Msa1360890 AT3G44200.2 38.318 107 58 4 29 135 114 212 1.21e-13 72.8
Msa1360890 AT3G44200.1 38.318 107 58 4 29 135 114 212 1.21e-13 72.8
Msa1360890 AT1G09000.1 39.252 107 58 4 22 127 171 271 1.29e-13 72.4
Msa1360890 AT2G32510.1 26.778 239 124 8 20 258 98 285 1.30e-13 71.6
Msa1360890 AT3G53930.1 38.136 118 60 5 19 132 113 221 1.58e-13 72.4
Msa1360890 AT3G53930.2 38.136 118 60 5 19 132 113 221 1.72e-13 72.4
Msa1360890 AT1G09000.2 39.252 107 58 4 22 127 171 271 1.87e-13 72.0
Msa1360890 AT3G53570.3 27.642 246 116 9 25 227 203 429 2.16e-13 71.6
Msa1360890 AT3G53570.5 27.642 246 116 9 25 227 203 429 2.16e-13 71.6
Msa1360890 AT3G53570.1 27.642 246 116 9 25 227 217 443 2.34e-13 71.6
Msa1360890 AT3G53570.4 27.642 246 116 9 25 227 217 443 2.34e-13 71.6
Msa1360890 AT3G53570.2 27.642 246 116 9 25 227 217 443 2.34e-13 71.6
Msa1360890 AT3G08730.1 38.679 106 57 3 31 136 240 337 3.38e-13 70.9
Msa1360890 AT3G08730.2 38.679 106 57 3 31 136 240 337 3.38e-13 70.9
Msa1360890 AT3G08720.1 38.679 106 57 3 31 136 246 343 3.48e-13 70.9
Msa1360890 AT3G08720.3 38.679 106 57 3 31 136 246 343 3.48e-13 70.9
Msa1360890 AT3G08720.4 38.679 106 57 3 31 136 246 343 3.48e-13 70.9
Msa1360890 AT3G08720.2 38.679 106 57 3 31 136 246 343 3.48e-13 70.9
Msa1360890 AT5G66710.1 41.593 113 52 6 27 132 175 280 7.61e-13 69.7
Msa1360890 AT1G69220.1 26.222 225 118 8 16 240 339 515 2.23e-12 68.9
Msa1360890 AT1G69220.2 26.222 225 118 8 16 240 312 488 2.29e-12 68.9
Msa1360890 AT5G57630.3 32.479 117 66 3 18 131 16 122 3.18e-12 67.4
Msa1360890 AT1G01140.1 26.549 226 109 8 14 233 106 280 3.93e-12 67.8
Msa1360890 AT4G26890.1 40.594 101 48 3 25 125 103 191 4.12e-12 67.4
Msa1360890 AT1G01140.3 26.549 226 109 8 14 233 106 280 4.19e-12 67.4
Msa1360890 AT1G51660.1 42.268 97 46 3 31 123 179 269 4.50e-12 67.0
Msa1360890 AT5G57630.2 32.759 116 65 3 18 130 104 209 6.04e-12 67.0
Msa1360890 AT4G08500.1 28.000 200 92 8 31 228 439 588 6.47e-12 67.4
Msa1360890 AT5G57630.1 32.759 116 65 3 18 130 104 209 6.96e-12 66.6
Msa1360890 AT4G24740.5 32.237 152 68 5 25 155 97 234 7.03e-12 65.1
Msa1360890 AT4G24740.3 32.237 152 68 5 25 155 200 337 7.06e-12 66.2
Msa1360890 AT3G18750.1 35.000 120 66 5 9 126 116 225 7.83e-12 67.0
Msa1360890 AT3G18750.3 35.000 120 66 5 9 126 116 225 7.83e-12 67.0
Msa1360890 AT3G18750.5 35.000 120 66 5 9 126 116 225 7.83e-12 67.0
Msa1360890 AT4G35780.1 39.623 106 53 4 23 125 385 482 9.06e-12 66.6
Msa1360890 AT1G01140.2 33.333 117 64 4 14 124 106 214 9.23e-12 66.6
Msa1360890 AT3G18750.4 35.000 120 66 5 9 126 98 207 1.15e-11 66.2
Msa1360890 AT5G67080.1 38.393 112 60 5 18 127 103 207 1.37e-11 65.5
Msa1360890 AT1G49160.2 33.884 121 68 5 9 127 116 226 1.53e-11 66.2
Msa1360890 AT1G49160.1 33.884 121 68 5 9 127 98 208 2.10e-11 65.5
Msa1360890 AT1G49160.5 33.884 121 68 5 9 127 163 273 2.32e-11 65.5
Msa1360890 AT1G18350.1 40.816 98 49 3 31 125 148 239 2.95e-11 64.3
Msa1360890 AT3G21220.2 41.237 97 47 4 31 123 170 260 3.76e-11 64.3
Msa1360890 AT3G21220.1 41.237 97 47 4 31 123 170 260 3.76e-11 64.3
Msa1360890 AT4G38470.3 38.462 104 56 3 24 127 387 482 3.92e-11 64.7
Msa1360890 AT4G38470.1 38.462 104 56 3 24 127 387 482 4.29e-11 64.7
Msa1360890 AT4G24740.10 26.244 221 120 8 39 227 8 217 4.62e-11 62.4
Msa1360890 AT4G24740.8 26.244 221 120 8 39 227 8 217 4.62e-11 62.4
Msa1360890 AT4G38470.2 38.462 104 56 3 24 127 387 482 5.20e-11 64.3
Msa1360890 AT1G73500.1 40.404 99 49 3 31 125 150 242 7.09e-11 63.2
Msa1360890 AT1G49160.3 33.884 121 68 5 9 127 163 273 7.48e-11 63.9

Find 138 sgRNAs with CRISPR-Local

Find 846 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGCCATTATCTGAAAA+TGG 0.168293 tig0017277:+938 Msa1360890:CDS
CAAGGCAAGTGGCGTATAAT+TGG 0.216288 tig0017277:-11999 None:intergenic
CTTTGCATGCCAACATTAAT+TGG 0.237085 tig0017277:-9927 None:intergenic
CGTGCTCCGGAGTTGCTTCT+TGG 0.239612 tig0017277:+1342 Msa1360890:CDS
ATTCATACCAATATATTTGA+TGG 0.295123 tig0017277:-695 None:intergenic
GGAGGACAACAAATTCAAAA+TGG 0.296419 tig0017277:-12053 None:intergenic
TTGTTAAAGTTGCTGACTTT+GGG 0.309740 tig0017277:+891 Msa1360890:CDS
TTTGAAGCCATCAAATATAT+TGG 0.329454 tig0017277:+688 Msa1360890:CDS
TTCCACTGCTCATCCCTGCC+TGG 0.352880 tig0017277:-9983 None:intergenic
CCTTTCTATGAACAGGTTAT+GGG 0.353755 tig0017277:+848 Msa1360890:intron
AAATATATATAATTTACATT+GGG 0.360357 tig0017277:-12025 None:intergenic
GTTGTTAAAGTTGCTGACTT+TGG 0.371280 tig0017277:+890 Msa1360890:CDS
GTTCCACCGTGTAAACTGTT+AGG 0.376618 tig0017277:+11901 Msa1360890:three_prime_UTR
TCGTCTGGAGCTGCTATTGC+TGG 0.378419 tig0017277:+9861 Msa1360890:CDS
AAGGCAAGTGGCGTATAATT+GGG 0.379858 tig0017277:-11998 None:intergenic
ACTTCTGCACCTTGAAATAG+TGG 0.381000 tig0017277:-1921 None:intergenic
TGAAGCCATTATCTGAAAAT+GGG 0.385965 tig0017277:+939 Msa1360890:CDS
ATAATTTACATTGGGGATCA+AGG 0.391575 tig0017277:-12017 None:intergenic
TACCTGAGTCAGGTTTCGTC+TGG 0.397060 tig0017277:+9846 Msa1360890:intron
TTCTGCTGTGGAGGATATCC+TGG 0.408739 tig0017277:-10188 None:intergenic
CTTGTATATGTGAAGTATCT+TGG 0.409607 tig0017277:-2260 None:intergenic
AACCATTTGGTACCGTGCTC+CGG 0.411552 tig0017277:+1329 Msa1360890:CDS
ACCTTGAAGCCACTATTTCA+AGG 0.413740 tig0017277:+1912 Msa1360890:CDS
TGCAGGTTGTTGTAACCATT+TGG 0.414513 tig0017277:+1316 Msa1360890:intron
TTCAAAATGGAACCACAGCC+TGG 0.419177 tig0017277:+6294 Msa1360890:CDS
TAAAGAGACATTTAGATATG+TGG 0.419701 tig0017277:+1859 Msa1360890:intron
TCAGGTACCTGAAAAGGATT+TGG 0.419922 tig0017277:-1954 None:intergenic
AAAATATATATAATTTACAT+TGG 0.424701 tig0017277:-12026 None:intergenic
TTAGCATCAGGTACCTGAAA+AGG 0.427384 tig0017277:-1960 None:intergenic
AGATTTGTTGCACACGAGGC+TGG 0.439233 tig0017277:+11740 Msa1360890:three_prime_UTR
GGATATCCTGGCATTCCCAT+TGG 0.442776 tig0017277:-10176 None:intergenic
GCAACGAGGTGTTCCACAAC+AGG 0.446969 tig0017277:+10028 Msa1360890:CDS
TTCCCCTTCAATGACTCCAT+TGG 0.449605 tig0017277:-11794 None:intergenic
AACAAACCTGTTGCTGCTGA+TGG 0.451452 tig0017277:-10052 None:intergenic
ACCTTGAAATAGTGGCTTCA+AGG 0.455130 tig0017277:-1913 None:intergenic
CAGTGTATTGGTTAATCGAC+TGG 0.457783 tig0017277:-296 None:intergenic
TCAACTTGACAAGATATTCA+AGG 0.460052 tig0017277:+2078 Msa1360890:CDS
GATATCCTGGCATTCCCATT+GGG 0.462213 tig0017277:-10175 None:intergenic
GTGGAACACCTCGTTGCATT+GGG 0.467473 tig0017277:-10022 None:intergenic
TCGAAAACTTGAGCTAGTTC+AGG 0.467623 tig0017277:+11642 Msa1360890:three_prime_UTR
CGTTGCATTGGGATGCCAGC+AGG 0.469966 tig0017277:-10011 None:intergenic
GTATTGACTTAACAGTGTAT+TGG 0.473489 tig0017277:-308 None:intergenic
ACAGGCCCATCAGCAGCAAC+AGG 0.477025 tig0017277:+10046 Msa1360890:CDS
TAAACTGTTAGGGATCATAT+AGG 0.479073 tig0017277:+11912 Msa1360890:three_prime_UTR
GTAAAGATTTCAATATTGAA+TGG 0.482844 tig0017277:+238 None:intergenic
AGAGGAAATAGTTGAGCTAC+TGG 0.485035 tig0017277:+11822 Msa1360890:three_prime_UTR
AAAGACCCAATGGGAATGCC+AGG 0.486170 tig0017277:+10170 Msa1360890:CDS
AGATTTCAATATTGAATGGC+AGG 0.488848 tig0017277:+242 None:intergenic
GTGAAGTATCTTGGTTCCAG+TGG 0.488952 tig0017277:-2251 None:intergenic
TCCACTGCTCATCCCTGCCT+GGG 0.490929 tig0017277:-9982 None:intergenic
ACTCGAGCATCTTTGACAAA+AGG 0.492462 tig0017277:-2608 None:intergenic
TTGCTGACTTTGGGCTTGCA+AGG 0.494632 tig0017277:+900 Msa1360890:CDS
CCTTACTTCCGTCCAGGCTG+TGG 0.498840 tig0017277:-6306 None:intergenic
TGTGAATTATCCCACACGTC+CGG 0.498897 tig0017277:+6620 Msa1360890:CDS
CAGAAATCAAGACGTATGTA+AGG 0.498939 tig0017277:+10206 Msa1360890:CDS
TGCTGCTGATGGGCCTGTTG+TGG 0.499210 tig0017277:-10041 None:intergenic
AAATCTGTGGTTGTGTCCAC+CGG 0.500086 tig0017277:-6639 None:intergenic
TATAACAGCAGCACAAGCTA+TGG 0.502536 tig0017277:+5245 Msa1360890:CDS
CTCCGGAGCACGGTACCAAA+TGG 0.509771 tig0017277:-1331 None:intergenic
TGTGGAACACCTCGTTGCAT+TGG 0.511061 tig0017277:-10023 None:intergenic
TATAATCTCACATCCCAGGC+AGG 0.512489 tig0017277:+9969 Msa1360890:CDS
AACACCAATGGAGTCATTGA+AGG 0.513252 tig0017277:+11790 Msa1360890:three_prime_UTR
ATACTGTGGCAGTTGCTGAA+TGG 0.516895 tig0017277:+327 Msa1360890:CDS
CATGTGAAAATATAGATTTG+AGG 0.517527 tig0017277:+11612 Msa1360890:three_prime_UTR
ATACGTCTTGATTTCTGCTG+TGG 0.520190 tig0017277:-10200 None:intergenic
TTCCACCGTGTAAACTGTTA+GGG 0.520968 tig0017277:+11902 Msa1360890:three_prime_UTR
ACATTTAGATATGTGGGCTG+TGG 0.524919 tig0017277:+1866 Msa1360890:intron
GCTATTGCTGGAAACATGCC+TGG 0.525437 tig0017277:+9873 Msa1360890:CDS
CCTTAGCACATCTTCCCCAC+TGG 0.526558 tig0017277:+2235 Msa1360890:CDS
TACTGGTGGCATGTATATCA+TGG 0.528784 tig0017277:+11839 Msa1360890:three_prime_UTR
ATGATCTGCTTTCATCCTTG+AGG 0.529745 tig0017277:+11689 Msa1360890:three_prime_UTR
AGCAGTGGAATTAATCCTGC+TGG 0.530273 tig0017277:+9996 Msa1360890:CDS
AAAGAGACATTTAGATATGT+GGG 0.531573 tig0017277:+1860 Msa1360890:intron
TATGAACAGGTTATGGGCGA+TGG 0.533257 tig0017277:+854 Msa1360890:intron
ATGCCAACATTAATTGGTCG+AGG 0.536101 tig0017277:-9921 None:intergenic
CGTCTTGATTTCTGCTGTGG+AGG 0.537193 tig0017277:-10197 None:intergenic
CGGCTGTGATTGCTGCATGT+TGG 0.539442 tig0017277:-6673 None:intergenic
GTCATCCCACATTAGAAAAG+TGG 0.540584 tig0017277:+2208 Msa1360890:CDS
AAAAGGCCTTACTTCCGTCC+AGG 0.546934 tig0017277:-6312 None:intergenic
TGTGCAGATATGATCCGAAA+AGG 0.547484 tig0017277:+5220 Msa1360890:intron
CTATTTGACGCATGACCACC+AGG 0.548847 tig0017277:-9891 None:intergenic
AAAGCAGATCATCAGAATAC+CGG 0.549097 tig0017277:-11678 None:intergenic
ACAAACCTGTTGCTGCTGAT+GGG 0.553904 tig0017277:-10051 None:intergenic
TTTAAGGATACCAACAGCGC+TGG 0.554418 tig0017277:-1379 None:intergenic
GCACTTGTACCATGCCAACC+TGG 0.555366 tig0017277:+6588 Msa1360890:CDS
TTTCAGATAATGGCTTCAGA+GGG 0.557594 tig0017277:-934 None:intergenic
TGGCGTATAATTGGGGATTG+AGG 0.560415 tig0017277:-11990 None:intergenic
TAATTCACAAAAGCCTCTCC+AGG 0.561125 tig0017277:-6606 None:intergenic
AACTACAACAAGGTTACAGT+TGG 0.561767 tig0017277:-11952 None:intergenic
TTCAGGACAATTCGTAACTC+CGG 0.562985 tig0017277:+11659 Msa1360890:three_prime_UTR
AAACATTATACCAGCGCTGT+TGG 0.563837 tig0017277:+1369 Msa1360890:CDS
GGTTGTGTCCACCGGACGTG+TGG 0.564371 tig0017277:-6631 None:intergenic
TGAAGTATCTTGGTTCCAGT+GGG 0.565008 tig0017277:-2250 None:intergenic
AACTTATAATCTCACATCCC+AGG 0.570901 tig0017277:+9965 Msa1360890:CDS
GGTTGTCCCTTCAAAATCTG+TGG 0.572004 tig0017277:-6652 None:intergenic
CATTTAGATATGTGGGCTGT+GGG 0.572377 tig0017277:+1867 Msa1360890:intron
GTCCCTCGACCAATTAATGT+TGG 0.572871 tig0017277:+9918 Msa1360890:CDS
TTGAGGAGAAAAGACCCAAT+GGG 0.574208 tig0017277:+10161 Msa1360890:CDS
TACAATATGAATTATTCTGA+TGG 0.574641 tig0017277:+11767 Msa1360890:three_prime_UTR
TTTGACAAAAGGTCATATGC+AGG 0.576206 tig0017277:-2597 None:intergenic
ATCAAGATTTGTTGCACACG+AGG 0.576355 tig0017277:+11736 Msa1360890:three_prime_UTR
AATATATATAATTTACATTG+GGG 0.581891 tig0017277:-12024 None:intergenic
CAAGATACTTCACATATACA+AGG 0.582077 tig0017277:+2261 Msa1360890:CDS
ACACCAATGGAGTCATTGAA+GGG 0.582959 tig0017277:+11791 Msa1360890:three_prime_UTR
AAATGGAACCACAGCCTGGA+CGG 0.583599 tig0017277:+6298 Msa1360890:CDS
AGGCAAGTGGCGTATAATTG+GGG 0.587953 tig0017277:-11997 None:intergenic
TCCCAGGCAGGGATGAGCAG+TGG 0.595368 tig0017277:+9981 Msa1360890:CDS
ACAGGTTATGGGCGATGGTG+AGG 0.595481 tig0017277:+859 Msa1360890:intron
AAAGCCTCTCCAGGTTGGCA+TGG 0.595576 tig0017277:-6597 None:intergenic
GTTGAGGAGAAAAGACCCAA+TGG 0.601461 tig0017277:+10160 Msa1360890:intron
TTATTCTGATGGAACACCAA+TGG 0.604526 tig0017277:+11778 Msa1360890:three_prime_UTR
TCACAAAAGCCTCTCCAGGT+TGG 0.606451 tig0017277:-6602 None:intergenic
ATAATCTCACATCCCAGGCA+GGG 0.616240 tig0017277:+9970 Msa1360890:CDS
CAACATGCAGCAATCACAGC+CGG 0.617560 tig0017277:+6674 Msa1360890:CDS
TGGGGAAGATGTGCTAAGGA+AGG 0.619326 tig0017277:-2231 None:intergenic
CCAGTGGGGAAGATGTGCTA+AGG 0.621419 tig0017277:-2235 None:intergenic
TGTACCATGCCAACCTGGAG+AGG 0.622877 tig0017277:+6593 Msa1360890:CDS
ATGGACTGAACTATCTGCAC+AGG 0.623426 tig0017277:+346 Msa1360890:CDS
TGCCAACATTAATTGGTCGA+GGG 0.628918 tig0017277:-9920 None:intergenic
ATGATCCCTAACAGTTTACA+CGG 0.633796 tig0017277:-11907 None:intergenic
GTTGTGTCCACCGGACGTGT+GGG 0.635167 tig0017277:-6630 None:intergenic
TTAGCTCCAAGAAGCAACTC+CGG 0.639529 tig0017277:-1348 None:intergenic
CAAGAAGCAACTCCGGAGCA+CGG 0.641447 tig0017277:-1341 None:intergenic
GAATTATCCCACACGTCCGG+TGG 0.647048 tig0017277:+6623 Msa1360890:CDS
CACCAATGGAGTCATTGAAG+GGG 0.648042 tig0017277:+11792 Msa1360890:three_prime_UTR
ATGGGCGATGGTGAGGAACA+CGG 0.648396 tig0017277:+866 Msa1360890:CDS
GAAGCCATTATCTGAAAATG+GGG 0.655802 tig0017277:+940 Msa1360890:CDS
ACATTGGGGATCAAGGCAAG+TGG 0.656395 tig0017277:-12010 None:intergenic
TTCAGATAATGGCTTCAGAG+GGG 0.671927 tig0017277:-933 None:intergenic
ATTATACAGCAACTACAACA+AGG 0.683377 tig0017277:-11962 None:intergenic
CATTGAAGGGGAATAAACAG+AGG 0.684561 tig0017277:+11804 Msa1360890:three_prime_UTR
GGAAATAGTTGAGCTACTGG+TGG 0.689750 tig0017277:+11825 Msa1360890:three_prime_UTR
AATAAGACATCATAGAGACA+AGG 0.707627 tig0017277:+269 Msa1360890:CDS
ATTGCTGGAAACATGCCTGG+TGG 0.745461 tig0017277:+9876 Msa1360890:CDS
GCTGGCATCCCAATGCAACG+AGG 0.747074 tig0017277:+10014 Msa1360890:CDS
GAAGTATCTTGGTTCCAGTG+GGG 0.748420 tig0017277:-2249 None:intergenic
ATCCCTAACAGTTTACACGG+TGG 0.755572 tig0017277:-11904 None:intergenic
ACACTGTTAAGTCAATACTG+TGG 0.769173 tig0017277:+313 Msa1360890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAATAAATTTATA+TGG - tig0017277:7270-7289 None:intergenic 0.0%
!!! AAATTATTTTTTAATTAAAA+CGG + tig0017277:9296-9315 Msa1360890:intron 0.0%
!! TTAACATACAAAAATAAAAA+AGG - tig0017277:621-640 None:intergenic 10.0%
!! ATAAAAATTATGATTAACTA+TGG + tig0017277:1475-1494 Msa1360890:intron 10.0%
!! AGTAATAATATAACATTATA+CGG - tig0017277:5541-5560 None:intergenic 10.0%
!!! ATTTATCATTATATATCTTT+TGG + tig0017277:5674-5693 Msa1360890:intron 10.0%
!!! TATTTTTTTTTTTAATCTGA+TGG + tig0017277:6958-6977 Msa1360890:intron 10.0%
!! TAGATATTATATAAACTAAT+AGG - tig0017277:7376-7395 None:intergenic 10.0%
!!! GAATTATTTCTTAAATATTA+CGG + tig0017277:8659-8678 Msa1360890:intron 10.0%
!! GTATAAAAAAAAGTAATATA+TGG + tig0017277:11309-11328 Msa1360890:intron 10.0%
!! AATATATATAATTTACATTG+GGG - tig0017277:12027-12046 None:intergenic 10.0%
!! TAATTTAACATATCATGATA+AGG - tig0017277:728-747 None:intergenic 15.0%
!!! AATAATTTTTTTTGACGATA+TGG - tig0017277:794-813 None:intergenic 15.0%
!! AGTTAGTATTATATAAAATC+AGG - tig0017277:1296-1315 None:intergenic 15.0%
!!! TTTGAAACTTGAATTATTTT+AGG + tig0017277:3905-3924 Msa1360890:intron 15.0%
!! TTTAGCGTTAAAATATTAAA+TGG - tig0017277:4990-5009 None:intergenic 15.0%
!! CATGTAACAAAATTAAAATA+AGG - tig0017277:5079-5098 None:intergenic 15.0%
!!! TATTTTAATTTTGTTACATG+TGG + tig0017277:5079-5098 Msa1360890:intron 15.0%
!!! TAACTGCTTTTTTTTTTTTT+TGG - tig0017277:5969-5988 None:intergenic 15.0%
!!! TTTAAAATTTTCATTGAGTA+TGG + tig0017277:6808-6827 Msa1360890:intron 15.0%
!! ATATGATTATTCATTACTAA+TGG + tig0017277:6832-6851 Msa1360890:intron 15.0%
!! AAAAAATATGAACTAAAATC+AGG - tig0017277:6946-6965 None:intergenic 15.0%
!!! TATTTTTTTTAGTATAAGCT+GGG - tig0017277:7241-7260 None:intergenic 15.0%
!!! ATATTTTTTTTAGTATAAGC+TGG - tig0017277:7242-7261 None:intergenic 15.0%
!! TTAATATGAATAACATATTG+TGG + tig0017277:7334-7353 Msa1360890:intron 15.0%
!!! TTTAGAGTATTATAACAATA+TGG + tig0017277:7781-7800 Msa1360890:intron 15.0%
!!! AATAATTCATCTTTTTTTGT+TGG - tig0017277:8647-8666 None:intergenic 15.0%
!! ACTATATCTATGTAATATTT+AGG - tig0017277:9082-9101 None:intergenic 15.0%
!!! CATTTTATATTACTTTAAGT+GGG + tig0017277:9531-9550 Msa1360890:intron 15.0%
!!! AAGGTTATTTATATTTTCAA+TGG + tig0017277:9609-9628 Msa1360890:intron 15.0%
!! ATGAATAGATTATATTGAAA+AGG - tig0017277:10972-10991 None:intergenic 15.0%
!! AATATAATCTATTCATGAAT+TGG + tig0017277:10976-10995 Msa1360890:intron 15.0%
!!! CAAAAAGTAATAAGATTTTT+AGG - tig0017277:12077-12096 None:intergenic 15.0%
!! ATTCATACCAATATATTTGA+TGG - tig0017277:698-717 None:intergenic 20.0%
!!! TGTTTTGATTTTCTATGTTT+TGG + tig0017277:1183-1202 Msa1360890:intron 20.0%
!! AAAGATGATAATAGACTTAA+CGG - tig0017277:1209-1228 None:intergenic 20.0%
!!! TTTATATAATACTAACTTGC+AGG + tig0017277:1299-1318 Msa1360890:intron 20.0%
!!! TAGAGATATAGTATCATTTT+TGG + tig0017277:2020-2039 Msa1360890:intron 20.0%
!! ACAAATAGTAAGATCATTAT+TGG + tig0017277:2286-2305 Msa1360890:intron 20.0%
!! TTATTCAAATATATGCAGAA+TGG + tig0017277:2313-2332 Msa1360890:intron 20.0%
!!! AGCATCATTTAGATTTTAAA+TGG - tig0017277:2698-2717 None:intergenic 20.0%
!! TATATAAAATTTCTACAGGA+TGG - tig0017277:3371-3390 None:intergenic 20.0%
!! ACTGTATATAAAATTTCTAC+AGG - tig0017277:3375-3394 None:intergenic 20.0%
!! ATTATTATAACAACGTAGAT+TGG + tig0017277:3395-3414 Msa1360890:intron 20.0%
!! TACAACACTAAATAGATATA+AGG + tig0017277:4105-4124 Msa1360890:intron 20.0%
!! AATAAGAATTTATCAAGTAG+TGG - tig0017277:4138-4157 Msa1360900:intron 20.0%
!!! TGATTCTAATATACTGTTTT+AGG - tig0017277:4256-4275 Msa1360900:intron 20.0%
!!! ACATTATACCTTTTTCTTTT+GGG + tig0017277:4412-4431 Msa1360890:intron 20.0%
!! TGTTTCTTCAAATAATGAAT+AGG - tig0017277:4500-4519 Msa1360900:intron 20.0%
!! TTAATTGGCATTTACATAAT+AGG + tig0017277:4562-4581 Msa1360890:intron 20.0%
!! GTTAAAATATTAAATGGATG+TGG - tig0017277:4984-5003 None:intergenic 20.0%
!! TTTACTAGAATGACAATAAT+GGG - tig0017277:5046-5065 None:intergenic 20.0%
!! AATACTAGATGAAATTCTAA+CGG - tig0017277:5113-5132 None:intergenic 20.0%
!!! AAATCATCTTTTTAATCACT+AGG - tig0017277:5324-5343 None:intergenic 20.0%
!!! CGTTTTTTATATTCTTGTTA+TGG + tig0017277:5797-5816 Msa1360890:intron 20.0%
!! TATTAAATACAACAGTAACA+TGG - tig0017277:5857-5876 None:intergenic 20.0%
!! GTATTTAATATAATCCTGAT+TGG + tig0017277:5867-5886 Msa1360890:intron 20.0%
!! AAAAAAAAAAAGCAGTTATG+CGG + tig0017277:5971-5990 Msa1360890:intron 20.0%
!! TTAAGCAAAAAAATGTGAAT+AGG - tig0017277:6247-6266 None:intergenic 20.0%
!!! TAATCAATAATTCTAGGAAA+AGG - tig0017277:6404-6423 None:intergenic 20.0%
!! TGAAAGTAATCAATAATTCT+AGG - tig0017277:6410-6429 None:intergenic 20.0%
!! AACAATTGCAATATCAAAAT+GGG - tig0017277:6783-6802 None:intergenic 20.0%
!!! ATATGATTATTTTCCACAAA+AGG - tig0017277:6884-6903 None:intergenic 20.0%
!!! TTTTTGTGAAGTCTTATTAT+AGG + tig0017277:7004-7023 Msa1360890:intron 20.0%
!!! ACTATCAGTGTTTTAAAAAT+CGG + tig0017277:7138-7157 Msa1360890:intron 20.0%
!!! CACTTTTAGAACATAAATTT+AGG - tig0017277:7309-7328 None:intergenic 20.0%
!!! CTAAATTTATGTTCTAAAAG+TGG + tig0017277:7307-7326 Msa1360890:intron 20.0%
!! AAATCACTCTCTTAAATAAA+GGG - tig0017277:7614-7633 None:intergenic 20.0%
!! AAAATCACTCTCTTAAATAA+AGG - tig0017277:7615-7634 None:intergenic 20.0%
!!! GTGATTTTGTAAAGAATATT+AGG + tig0017277:7627-7646 Msa1360890:intron 20.0%
!! CTTAAATCAAATTTGTGTAT+TGG + tig0017277:8729-8748 Msa1360890:intron 20.0%
!!! AACATTTTGTAAGTGTATTA+TGG - tig0017277:8955-8974 None:intergenic 20.0%
!!! TAAAACTTGATTTAAGACAA+TGG - tig0017277:9056-9075 None:intergenic 20.0%
!! TAGATATAGTACAAGTTATA+CGG + tig0017277:9092-9111 Msa1360890:intron 20.0%
!! AAAAAATAATTTGATGCAAG+TGG - tig0017277:9288-9307 None:intergenic 20.0%
!! TAAAATGGTAAACAAAACTT+GGG - tig0017277:9518-9537 None:intergenic 20.0%
!! ATAAAATGGTAAACAAAACT+TGG - tig0017277:9519-9538 None:intergenic 20.0%
!! CCACTTAAAGTAATATAAAA+TGG - tig0017277:9533-9552 None:intergenic 20.0%
!!! CCATTTTATATTACTTTAAG+TGG + tig0017277:9530-9549 Msa1360890:intron 20.0%
!! GAATCAAATCAAGTTAAATA+TGG - tig0017277:9640-9659 None:intergenic 20.0%
!! AATCAAATTCACCATAAAAA+AGG - tig0017277:10115-10134 None:intergenic 20.0%
!!! AGTAGTTTTTATCAACAATT+AGG + tig0017277:10375-10394 Msa1360890:intron 20.0%
!!! AAATATAAAATGCCATTTTC+GGG - tig0017277:10801-10820 None:intergenic 20.0%
!!! CAAATATAAAATGCCATTTT+CGG - tig0017277:10802-10821 None:intergenic 20.0%
!! TAGATTATATTGAAAAGGAA+AGG - tig0017277:10967-10986 None:intergenic 20.0%
!! TTTAAGAATTCGGAAAAAAA+GGG + tig0017277:11077-11096 Msa1360890:intron 20.0%
!! AAGAGAGATGTATTATATTT+AGG + tig0017277:11256-11275 Msa1360890:intron 20.0%
!! TACAATATGAATTATTCTGA+TGG + tig0017277:11767-11786 Msa1360890:three_prime_UTR 20.0%
!!! AAAGTAATAAGATTTTTAGG+AGG - tig0017277:12074-12093 None:intergenic 20.0%
!!! ATTTTTTGTGAAGTTGAAGA+TGG + tig0017277:376-395 Msa1360890:intron 25.0%
! ATGTTGAAGATGTTGAATAA+AGG + tig0017277:423-442 Msa1360890:intron 25.0%
! TGTTGAAGATGTTGAATAAA+GGG + tig0017277:424-443 Msa1360890:intron 25.0%
!! TATATTTTCCCTTCAGTAAT+TGG + tig0017277:651-670 Msa1360890:intron 25.0%
!! TTTGAAGCCATCAAATATAT+TGG + tig0017277:688-707 Msa1360890:CDS 25.0%
! TTTAACATATCATGATAAGG+TGG - tig0017277:725-744 None:intergenic 25.0%
!!! AATTCAAATGTCTACTTTTG+GGG - tig0017277:758-777 None:intergenic 25.0%
!!! GAATTCAAATGTCTACTTTT+GGG - tig0017277:759-778 None:intergenic 25.0%
!! TGAATTCAAATGTCTACTTT+TGG - tig0017277:760-779 None:intergenic 25.0%
!!! TATTTTGAAGAGTTGAAATC+TGG + tig0017277:1036-1055 Msa1360890:intron 25.0%
! ACATATCAAAAGGTAAAATG+TGG - tig0017277:1258-1277 None:intergenic 25.0%
! AAACGATCAAACATATCAAA+AGG - tig0017277:1268-1287 None:intergenic 25.0%
! CACACACAAAACTTAATTTA+AGG - tig0017277:1398-1417 None:intergenic 25.0%
!!! GTTGTACTTTTTTACTACAT+TGG + tig0017277:1567-1586 Msa1360890:intron 25.0%
!! AATCTGACACAACAATTTTT+AGG + tig0017277:1651-1670 Msa1360890:intron 25.0%
!! ATCTGACACAACAATTTTTA+GGG + tig0017277:1652-1671 Msa1360890:intron 25.0%
!! TTAGTGGATGTAATTATTGT+TGG + tig0017277:1727-1746 Msa1360890:intron 25.0%
!! TAGTGGATGTAATTATTGTT+GGG + tig0017277:1728-1747 Msa1360890:intron 25.0%
! ACAATTGATAAGTTTACCTT+TGG - tig0017277:1772-1791 None:intergenic 25.0%
! CATATCTAAATGTCTCTTTA+AGG - tig0017277:1859-1878 None:intergenic 25.0%
! TAAAGAGACATTTAGATATG+TGG + tig0017277:1859-1878 Msa1360890:intron 25.0%
! AAAGAGACATTTAGATATGT+GGG + tig0017277:1860-1879 Msa1360890:intron 25.0%
!! ATCTTTTTCCATGAAACTAA+TGG + tig0017277:2399-2418 Msa1360890:intron 25.0%
!! ATCTTTTTCCATGAAACTAA+TGG + tig0017277:2399-2418 Msa1360890:intron 25.0%
! TACAAATCATAAGCGTATAA+GGG - tig0017277:2746-2765 None:intergenic 25.0%
!! TTTTGTTGATCTTGTAGTTA+TGG + tig0017277:2836-2855 Msa1360890:intron 25.0%
! CATAAACAAAATCGATGAAA+GGG + tig0017277:3077-3096 Msa1360890:intron 25.0%
! GAATAAAAACAATGAAGAGT+AGG + tig0017277:3109-3128 Msa1360890:intron 25.0%
! ATCTAGTTATAAAAGAAGAG+AGG + tig0017277:3134-3153 Msa1360890:intron 25.0%
! AATTCTTGATAAGTGAGTTT+AGG + tig0017277:3689-3708 Msa1360890:intron 25.0%
!! AATTCAAGTTTCAAACAACA+TGG - tig0017277:3900-3919 None:intergenic 25.0%
!! TAACAGATATACTCTTTTTG+TGG - tig0017277:4036-4055 Msa1360900:CDS 25.0%
!! TTTTCACAGAAATACACAAA+GGG - tig0017277:4222-4241 Msa1360900:intron 25.0%
!! TTTTTCACAGAAATACACAA+AGG - tig0017277:4223-4242 Msa1360900:intron 25.0%
! CAAGGAAGTTGTATAATTAA+AGG - tig0017277:4297-4316 Msa1360900:intron 25.0%
! AACTAACAATCAATCAATCA+AGG - tig0017277:4315-4334 Msa1360900:intron 25.0%
! TTAATAAAACAACACTAACC+AGG - tig0017277:4358-4377 Msa1360900:intron 25.0%
!! CACATTATACCTTTTTCTTT+TGG + tig0017277:4411-4430 Msa1360890:intron 25.0%
! TTTCCGATTACTTAAAATAG+AGG + tig0017277:4609-4628 Msa1360890:intron 25.0%
!!! TCACCTCTATTTTAAGTAAT+CGG - tig0017277:4615-4634 Msa1360900:intron 25.0%
! GTTTACTAGAATGACAATAA+TGG - tig0017277:5047-5066 None:intergenic 25.0%
! AATTAAAATAAGGCTGCATT+TGG - tig0017277:5069-5088 None:intergenic 25.0%
! ATACTAGATGAAATTCTAAC+GGG - tig0017277:5112-5131 None:intergenic 25.0%
! AGAATTTCATCTAGTATTCA+TGG + tig0017277:5115-5134 Msa1360890:intron 25.0%
!!! TATTTTTTTCCCTCTATTAG+CGG + tig0017277:5185-5204 Msa1360890:intron 25.0%
!! TATATTTTACACATTGAGTG+TGG - tig0017277:5627-5646 None:intergenic 25.0%
! TTCAGAAATTTATCAAAGCA+GGG - tig0017277:5701-5720 None:intergenic 25.0%
! ATTCAGAAATTTATCAAAGC+AGG - tig0017277:5702-5721 None:intergenic 25.0%
! TAAATTTCTGAATATGTCGT+TGG + tig0017277:5709-5728 Msa1360890:intron 25.0%
! TATCTAGTCAAGATTTCAAT+AGG - tig0017277:5761-5780 None:intergenic 25.0%
! ACAAGAATATAAAAAACGCA+AGG - tig0017277:5795-5814 None:intergenic 25.0%
! TATTAGTTCACAAAAAGCTT+CGG - tig0017277:6110-6129 None:intergenic 25.0%
!! TTTTGCTGAATTAGACAATT+TGG + tig0017277:6163-6182 Msa1360890:intron 25.0%
! TTTGCTGAATTAGACAATTT+GGG + tig0017277:6164-6183 Msa1360890:intron 25.0%
!!! ATGTTTTACTTTGTTTTTCC+AGG + tig0017277:6268-6287 Msa1360890:intron 25.0%
!! TTTTTCCAGGTATTTCAAAA+TGG + tig0017277:6281-6300 Msa1360890:intron 25.0%
! TTGCAAACATGTTTAACTAA+AGG - tig0017277:6554-6573 None:intergenic 25.0%
!!! TCTTTTGAGATTTTTGCAAA+AGG - tig0017277:6721-6740 None:intergenic 25.0%
! AAAAGATATTGAAATTGTGC+AGG + tig0017277:6741-6760 Msa1360890:intron 25.0%
! CAACAATTGCAATATCAAAA+TGG - tig0017277:6784-6803 None:intergenic 25.0%
!! ATTCTTTTGTGTTTACTGTA+TGG + tig0017277:7398-7417 Msa1360890:intron 25.0%
! AGCCTAATAAAAAATGTCTA+GGG - tig0017277:7531-7550 None:intergenic 25.0%
! AATCACTCTCTTAAATAAAG+GGG - tig0017277:7613-7632 None:intergenic 25.0%
! AAAATCACTCTCTTAAACAA+GGG - tig0017277:7716-7735 None:intergenic 25.0%
! ATACAAAATCCACCTAATTT+GGG - tig0017277:7872-7891 None:intergenic 25.0%
! AATACAAAATCCACCTAATT+TGG - tig0017277:7873-7892 None:intergenic 25.0%
! AAAAGAAAGAGAGAAATTGA+AGG - tig0017277:7946-7965 None:intergenic 25.0%
! GAAAACCTAGAAAAACTATA+AGG - tig0017277:8009-8028 None:intergenic 25.0%
! TTTGTATCACATAAAACACT+TGG + tig0017277:8356-8375 Msa1360890:intron 25.0%
! TTACACGATTTAAATATCTC+GGG - tig0017277:8458-8477 None:intergenic 25.0%
! GTTACACGATTTAAATATCT+CGG - tig0017277:8459-8478 None:intergenic 25.0%
! GAGATATAGTACAAGTTATA+TGG + tig0017277:8681-8700 Msa1360890:intron 25.0%
! GATTTAAGAACATATGTAAG+TGG - tig0017277:8859-8878 None:intergenic 25.0%
! AAGTGTATTATGGAACAATA+TGG - tig0017277:8945-8964 None:intergenic 25.0%
!!! TAAGACAATGGTTTTAATCA+CGG - tig0017277:9044-9063 None:intergenic 25.0%
! TAAATTAAAAGCGACATTAG+AGG + tig0017277:9186-9205 Msa1360890:intron 25.0%
! AAAATGGTAAACAAAACTTG+GGG - tig0017277:9517-9536 None:intergenic 25.0%
! TTCATTAATAGAAGCTACTA+GGG - tig0017277:9684-9703 None:intergenic 25.0%
! TTTCATTAATAGAAGCTACT+AGG - tig0017277:9685-9704 None:intergenic 25.0%
! AAAATGACTTAAATTTCAGC+AGG - tig0017277:9718-9737 None:intergenic 25.0%
! TTACTCATGATTCTTACTAA+GGG + tig0017277:9745-9764 Msa1360890:intron 25.0%
! CACATTCAAAAAAAATGAAG+TGG - tig0017277:9815-9834 None:intergenic 25.0%
!!! GTTTGTTGTTTATTTGGAAA+AGG + tig0017277:10068-10087 Msa1360890:intron 25.0%
!! TTATCAATTTTCCCATGTTT+TGG + tig0017277:10349-10368 Msa1360890:intron 25.0%
! TCTCAAATACTTTGTAGTAT+CGG - tig0017277:10478-10497 None:intergenic 25.0%
! ATCTATTCATGAATTGGATT+AGG + tig0017277:10982-11001 Msa1360890:intron 25.0%
! ATCAACATGAAGAAATAATG+TGG + tig0017277:11021-11040 Msa1360890:intron 25.0%
!!! TTTACCTTTGAAATATAGAG+AGG + tig0017277:11050-11069 Msa1360890:intron 25.0%
! GTTTAAGAATTCGGAAAAAA+AGG + tig0017277:11076-11095 Msa1360890:intron 25.0%
!!! TCTTTTTTCTGCTTTGAAAT+AGG - tig0017277:11240-11259 None:intergenic 25.0%
! AAATATGATGTCTCATGATT+AGG + tig0017277:11577-11596 Msa1360890:intron 25.0%
! CATGTGAAAATATAGATTTG+AGG + tig0017277:11612-11631 Msa1360890:three_prime_UTR 25.0%
! GATATCATTAACAAAAAGTG+AGG - tig0017277:11716-11735 None:intergenic 25.0%
AATAAGACATCATAGAGACA+AGG + tig0017277:269-288 Msa1360890:CDS 30.0%
!! GTATTGACTTAACAGTGTAT+TGG - tig0017277:311-330 None:intergenic 30.0%
GTTGAAGATGTTGAATAAAG+GGG + tig0017277:425-444 Msa1360890:intron 30.0%
TTGAAGATGTTGAATAAAGG+GGG + tig0017277:426-445 Msa1360890:intron 30.0%
GTAAAATACCACAAAATGGT+GGG + tig0017277:547-566 Msa1360890:intron 30.0%
TGTACTATCCAATTACTGAA+GGG - tig0017277:662-681 None:intergenic 30.0%
ATGTACTATCCAATTACTGA+AGG - tig0017277:663-682 None:intergenic 30.0%
AGAAAGGTTGTTAGAAAGAT+GGG - tig0017277:835-854 None:intergenic 30.0%
TAGAAAGGTTGTTAGAAAGA+TGG - tig0017277:836-855 None:intergenic 30.0%
!! TTGTTAAAGTTGCTGACTTT+GGG + tig0017277:891-910 Msa1360890:CDS 30.0%
TGAAGCCATTATCTGAAAAT+GGG + tig0017277:939-958 Msa1360890:CDS 30.0%
TAAAAATAGCATAGTCATGC+AGG - tig0017277:1015-1034 None:intergenic 30.0%
TGCATATAATACTACAGTAC+CGG + tig0017277:1062-1081 Msa1360890:intron 30.0%
! GTAGTAAAAAAGTACAACAC+AGG - tig0017277:1565-1584 None:intergenic 30.0%
TCAAAAGCCATAACTTATTC+AGG - tig0017277:1629-1648 None:intergenic 30.0%
!!! GACGACTGTAATTTTTTTAG+TGG + tig0017277:1711-1730 Msa1360890:intron 30.0%
AGTGGATGTAATTATTGTTG+GGG + tig0017277:1729-1748 Msa1360890:intron 30.0%
TCAACTTGACAAGATATTCA+AGG + tig0017277:2078-2097 Msa1360890:CDS 30.0%
! GACAAGATATTCAAGGTTTT+AGG + tig0017277:2085-2104 Msa1360890:CDS 30.0%
! CTTGTATATGTGAAGTATCT+TGG - tig0017277:2263-2282 None:intergenic 30.0%
CAAGATACTTCACATATACA+AGG + tig0017277:2261-2280 Msa1360890:CDS 30.0%
GCAAGTAAAAGAGAAAACAA+AGG - tig0017277:2361-2380 None:intergenic 30.0%
! ACTGTTTGCAAAAAGCATAA+CGG - tig0017277:2427-2446 None:intergenic 30.0%
GCAAGTAAAAGAGAAAACAA+AGG - tig0017277:2361-2380 None:intergenic 30.0%
AAATGATGCTAAACTGAACA+TGG + tig0017277:2708-2727 Msa1360890:intron 30.0%
ACAAATCATAAGCGTATAAG+GGG - tig0017277:2745-2764 None:intergenic 30.0%
CTACAAATCATAAGCGTATA+AGG - tig0017277:2747-2766 None:intergenic 30.0%
TGATGATCTCACAGTATTAT+GGG - tig0017277:2778-2797 None:intergenic 30.0%
ATGATGATCTCACAGTATTA+TGG - tig0017277:2779-2798 None:intergenic 30.0%
CTACAAGATCAACAAAAACA+GGG - tig0017277:2833-2852 None:intergenic 30.0%
ACTACAAGATCAACAAAAAC+AGG - tig0017277:2834-2853 None:intergenic 30.0%
!!! CCTTTCATCGATTTTGTTTA+TGG - tig0017277:3079-3098 None:intergenic 30.0%
CCATAAACAAAATCGATGAA+AGG + tig0017277:3076-3095 Msa1360890:intron 30.0%
AAGACACAAATGAAGAAATG+TGG + tig0017277:3185-3204 Msa1360890:intron 30.0%
ATATAAAACCCTTGAGAACT+AGG + tig0017277:3235-3254 Msa1360890:intron 30.0%
TATAAAACCCTTGAGAACTA+GGG + tig0017277:3236-3255 Msa1360890:intron 30.0%
TTCAAAAGTTGTATCAGATG+AGG - tig0017277:3451-3470 None:intergenic 30.0%
! AACTTTTGAACAACGTAGAT+TGG + tig0017277:3461-3480 Msa1360890:intron 30.0%
GAACTCAAAAATTGTATCAG+AGG - tig0017277:3520-3539 None:intergenic 30.0%
!!! ATTTTTGAGTTCCTCCAAAT+TGG + tig0017277:3528-3547 Msa1360890:intron 30.0%
! TCATGGAAACTTTTTGCTAA+GGG - tig0017277:3628-3647 None:intergenic 30.0%
! TTCATGGAAACTTTTTGCTA+AGG - tig0017277:3629-3648 None:intergenic 30.0%
GTTTCCATGAAGTTCAATTT+AGG + tig0017277:3638-3657 Msa1360890:intron 30.0%
ACTTCCTAAATTGAACTTCA+TGG - tig0017277:3645-3664 None:intergenic 30.0%
ATGTATATAGATACTTCCTC+CGG - tig0017277:3736-3755 None:intergenic 30.0%
ATATTGGTGTAGTGTGTAAT+GGG - tig0017277:3819-3838 None:intergenic 30.0%
AATATTGGTGTAGTGTGTAA+TGG - tig0017277:3820-3839 None:intergenic 30.0%
TTACACACTACACCAATATT+TGG + tig0017277:3820-3839 Msa1360890:intron 30.0%
! ACTACACCAATATTTGGTTT+CGG + tig0017277:3826-3845 Msa1360890:intron 30.0%
!!! TTTTAGGTTCTCATGTTTAG+TGG + tig0017277:3921-3940 Msa1360890:intron 30.0%
TCTCAATATCAACATATTCC+CGG - tig0017277:4066-4085 Msa1360900:CDS 30.0%
GGAATATGTTGATATTGAGA+AGG + tig0017277:4066-4085 Msa1360890:intron 30.0%
! TGATATTGAGAAGGATTTTG+AGG + tig0017277:4075-4094 Msa1360890:intron 30.0%
TATCATCATTCTTTAAGCCA+TGG + tig0017277:4176-4195 Msa1360890:intron 30.0%
TTCTTTAAGCCATGGATATT+AGG + tig0017277:4184-4203 Msa1360890:intron 30.0%
TCTTTAAGCCATGGATATTA+GGG + tig0017277:4185-4204 Msa1360890:intron 30.0%
AAATAATGAATAGGAGCAGT+TGG - tig0017277:4491-4510 Msa1360900:intron 30.0%
GAATTCACAACCAATAACAT+TGG + tig0017277:4538-4557 Msa1360890:intron 30.0%
!! ACCAATAACATTGGCTTAAT+TGG + tig0017277:4547-4566 Msa1360890:intron 30.0%
TAGGAATATTTCGCCTATTA+AGG + tig0017277:4581-4600 Msa1360890:intron 30.0%
! CTCGATGAATTTGTTCTAAA+TGG + tig0017277:4692-4711 Msa1360890:intron 30.0%
!! CATGATACCAGTTTTATGAT+GGG - tig0017277:5461-5480 None:intergenic 30.0%
!! ACATGATACCAGTTTTATGA+TGG - tig0017277:5462-5481 None:intergenic 30.0%
TCAGAAATTTATCAAAGCAG+GGG - tig0017277:5700-5719 None:intergenic 30.0%
! AACTTCTGAAAATTCCAATC+AGG - tig0017277:5884-5903 None:intergenic 30.0%
! GGAATTTTCAGAAGTTATTG+AGG + tig0017277:5888-5907 Msa1360890:intron 30.0%
TGCTGCTCAATTAGATAATT+TGG + tig0017277:6000-6019 Msa1360890:intron 30.0%
GCTGCTCAATTAGATAATTT+GGG + tig0017277:6001-6020 Msa1360890:intron 30.0%
CTGCTCAATTAGATAATTTG+GGG + tig0017277:6002-6021 Msa1360890:intron 30.0%
TTGCTGAATTAGACAATTTG+GGG + tig0017277:6165-6184 Msa1360890:intron 30.0%
! GGCTTTATGCGATAAAAAAT+GGG - tig0017277:6383-6402 None:intergenic 30.0%
! AGGCTTTATGCGATAAAAAA+TGG - tig0017277:6384-6403 None:intergenic 30.0%
CTAAAGGAGATAAATGATCT+TGG - tig0017277:6538-6557 None:intergenic 30.0%
!!! ACCCCTAGACATTTTTTATT+AGG + tig0017277:7526-7545 Msa1360890:intron 30.0%
GCCTAATAAAAAATGTCTAG+GGG - tig0017277:7530-7549 None:intergenic 30.0%
CAGCCTAATAAAAAATGTCT+AGG - tig0017277:7532-7551 None:intergenic 30.0%
ATCACTCTCTTAAATAAAGG+GGG - tig0017277:7612-7631 None:intergenic 30.0%
!! TTTGTGATTTTAGAGGGAAT+GGG + tig0017277:7653-7672 Msa1360890:intron 30.0%
AAATCACTCTCTTAAACAAG+GGG - tig0017277:7715-7734 None:intergenic 30.0%
CAAAATCACTCTCTTAAACA+AGG - tig0017277:7717-7736 None:intergenic 30.0%
! AATGTATTGGATGAGCATTT+TGG - tig0017277:7838-7857 None:intergenic 30.0%
TACAAAATCCACCTAATTTG+GGG - tig0017277:7871-7890 None:intergenic 30.0%
ACAACATTAGAGAAAGAATC+GGG - tig0017277:8163-8182 None:intergenic 30.0%
GACAACATTAGAGAAAGAAT+CGG - tig0017277:8164-8183 None:intergenic 30.0%
! TAAGACTGGCAATTTTGTAT+GGG - tig0017277:8294-8313 None:intergenic 30.0%
TTATCATACAGTTGTAAGAC+TGG - tig0017277:8308-8327 None:intergenic 30.0%
AAATACTGCTCAAAGATGAA+GGG - tig0017277:8337-8356 None:intergenic 30.0%
AAAATACTGCTCAAAGATGA+AGG - tig0017277:8338-8357 None:intergenic 30.0%
! TAAACCATCGAATTCAAGTT+AGG - tig0017277:8401-8420 None:intergenic 30.0%
! TTTCTCTGTTGTTTAGTACT+AGG + tig0017277:8430-8449 Msa1360890:intron 30.0%
! TTCTCTGTTGTTTAGTACTA+GGG + tig0017277:8431-8450 Msa1360890:intron 30.0%
! TCTAGTTTAGAGATGAAAGT+TGG - tig0017277:8501-8520 None:intergenic 30.0%
TAGAAGCAAGATAGAGTATA+TGG - tig0017277:8553-8572 None:intergenic 30.0%
TTCATCTTTAAATGCGAGAA+TGG - tig0017277:8611-8630 None:intergenic 30.0%
ATTGTTGAAGATTATTGACG+CGG + tig0017277:8815-8834 Msa1360890:intron 30.0%
TTTATACCGCTATAGCATAA+TGG + tig0017277:8907-8926 Msa1360890:intron 30.0%
CAAATTCCATTATGCTATAG+CGG - tig0017277:8916-8935 None:intergenic 30.0%
! TTATAAAATAGCCGCTTTAG+TGG + tig0017277:8973-8992 Msa1360890:intron 30.0%
TACGGCAAGTATTAAGTATA+TGG + tig0017277:9110-9129 Msa1360890:intron 30.0%
GTTGTTGAAGATTATTGATG+CGG + tig0017277:9244-9263 Msa1360890:intron 30.0%
TTGTTGAAGATTATTGATGC+GGG + tig0017277:9245-9264 Msa1360890:intron 30.0%
! CATTTGAACTGGTCAAATTT+TGG - tig0017277:9388-9407 None:intergenic 30.0%
AGTTTAATTACTTCGTGCTA+AGG + tig0017277:9590-9609 Msa1360890:intron 30.0%
CTAGGGATATTATTCATACA+AGG - tig0017277:9667-9686 None:intergenic 30.0%
CTTACTCATGATTCTTACTA+AGG + tig0017277:9744-9763 Msa1360890:intron 30.0%
!!! ATTTTTTGTTTACCTGAGTC+AGG + tig0017277:9836-9855 Msa1360890:intron 30.0%
!! CAACAGGTTTGTTGTTTATT+TGG + tig0017277:10062-10081 Msa1360890:intron 30.0%
!!! TACCTTGTTGTCCTTTTTTA+TGG + tig0017277:10101-10120 Msa1360890:intron 30.0%
AACTTGGCATTTCATAAAAC+TGG + tig0017277:10294-10313 Msa1360890:intron 30.0%
TTTATCAAGGTCATCAAAGT+TGG + tig0017277:10601-10620 Msa1360890:intron 30.0%
!!! TTTTCGGGTAATATTTTCTC+AGG - tig0017277:10786-10805 None:intergenic 30.0%
GAGAAAATATTACCCGAAAA+TGG + tig0017277:10786-10805 Msa1360890:intron 30.0%
TACGAAATTTACAAGCAAAC+CGG - tig0017277:10864-10883 None:intergenic 30.0%
GTAATTCATAATTTGACCAG+AGG + tig0017277:10881-10900 Msa1360890:intron 30.0%
CATACCTTCAATTCTTACAT+CGG + tig0017277:11413-11432 Msa1360890:intron 30.0%
TAAAGAATTGGACATAGAAG+CGG - tig0017277:11447-11466 None:intergenic 30.0%
GACACGAACTATTAAAGAAT+TGG - tig0017277:11459-11478 None:intergenic 30.0%
TAAACTGTTAGGGATCATAT+AGG + tig0017277:11912-11931 Msa1360890:three_prime_UTR 30.0%
ATTATACAGCAACTACAACA+AGG - tig0017277:11965-11984 None:intergenic 30.0%
ATAATTTACATTGGGGATCA+AGG - tig0017277:12020-12039 None:intergenic 30.0%
ACACTGTTAAGTCAATACTG+TGG + tig0017277:313-332 Msa1360890:CDS 35.0%
GTTGTTGTCACATGACTAAA+AGG + tig0017277:469-488 Msa1360890:intron 35.0%
! TACCTTGTCTTTTACACAAG+AGG - tig0017277:520-539 None:intergenic 35.0%
CTTGTGTAAAAGACAAGGTA+AGG + tig0017277:520-539 Msa1360890:intron 35.0%
CTGCGTAAAATACCACAAAA+TGG + tig0017277:543-562 Msa1360890:intron 35.0%
CGTAAAATACCACAAAATGG+TGG + tig0017277:546-565 Msa1360890:intron 35.0%
CTAAAGCTTCAGCATACATA+AGG - tig0017277:586-605 None:intergenic 35.0%
CAAAAATAAAAAAGGCAGCC+CGG - tig0017277:613-632 None:intergenic 35.0%
AAGATGGGTGCACAAAAAAA+TGG - tig0017277:820-839 None:intergenic 35.0%
CTAACAACCTTTCTATGAAC+AGG + tig0017277:841-860 Msa1360890:intron 35.0%
ACCTTTCTATGAACAGGTTA+TGG + tig0017277:847-866 Msa1360890:intron 35.0%
CCTTTCTATGAACAGGTTAT+GGG + tig0017277:848-867 Msa1360890:intron 35.0%
!! GTTGTTAAAGTTGCTGACTT+TGG + tig0017277:890-909 Msa1360890:CDS 35.0%
! TTTCAGATAATGGCTTCAGA+GGG - tig0017277:937-956 None:intergenic 35.0%
!! TTTTCAGATAATGGCTTCAG+AGG - tig0017277:938-957 None:intergenic 35.0%
CTGAAGCCATTATCTGAAAA+TGG + tig0017277:938-957 Msa1360890:CDS 35.0%
GAAGCCATTATCTGAAAATG+GGG + tig0017277:940-959 Msa1360890:CDS 35.0%
! CATACCCCATTTTCAGATAA+TGG - tig0017277:947-966 None:intergenic 35.0%
CAAAAGGTAAAATGTGGTAC+AGG - tig0017277:1252-1271 None:intergenic 35.0%
TGATTGTTATCAATGCATCG+AGG + tig0017277:1519-1538 Msa1360890:intron 35.0%
GATTGTTATCAATGCATCGA+GGG + tig0017277:1520-1539 Msa1360890:intron 35.0%
ATCAACCTCAAGTCAAACTA+AGG - tig0017277:1605-1624 None:intergenic 35.0%
GTTGATGCCTGAATAAGTTA+TGG + tig0017277:1619-1638 Msa1360890:intron 35.0%
GTAATTATTGTTGGGGACTT+CGG + tig0017277:1736-1755 Msa1360890:intron 35.0%
ATATTCCAGATCCACTTACT+TGG + tig0017277:2167-2186 Msa1360890:intron 35.0%
AGTAACAATGTCCAAGTAAG+TGG - tig0017277:2181-2200 None:intergenic 35.0%
! TAACGGATCCATTAGTTTCA+TGG - tig0017277:2410-2429 None:intergenic 35.0%
ACTGTTTGCAAAAAGCAGAA+CGG - tig0017277:2532-2551 None:intergenic 35.0%
TTTGACAAAAGGTCATATGC+AGG - tig0017277:2600-2619 None:intergenic 35.0%
! GTATTTCTAAACCATTGCGA+AGG + tig0017277:2633-2652 Msa1360890:intron 35.0%
GAAGTACATCCTTCATATAG+AGG - tig0017277:2670-2689 None:intergenic 35.0%
CAAATCATAAGCGTATAAGG+GGG - tig0017277:2744-2763 None:intergenic 35.0%
ATGATCTCACAGTATTATGG+GGG - tig0017277:2776-2795 None:intergenic 35.0%
GATGATCTCACAGTATTATG+GGG - tig0017277:2777-2796 None:intergenic 35.0%
TGACAACATAGAAAGAGGTA+GGG - tig0017277:2889-2908 None:intergenic 35.0%
AAACACAAAAGCCCCTATAA+TGG - tig0017277:3051-3070 None:intergenic 35.0%
! TTGGTAGTCTGTTCTATGAA+GGG + tig0017277:3212-3231 Msa1360890:intron 35.0%
!! AACTAGGGTTAGCTTTGAAT+GGG + tig0017277:3251-3270 Msa1360890:intron 35.0%
AGTAGGTTTGCAGACTAAAA+GGG - tig0017277:3339-3358 None:intergenic 35.0%
AAATTTCTACAGGATGGTAG+TGG - tig0017277:3365-3384 None:intergenic 35.0%
AGTTGTATCAGATGAGGTAT+TGG - tig0017277:3445-3464 None:intergenic 35.0%
! AATTGTATCAGAGGAGGTAT+TGG - tig0017277:3511-3530 None:intergenic 35.0%
CTCAAAAATTGTATCAGAGG+AGG - tig0017277:3517-3536 None:intergenic 35.0%
! TTTTGCTAAGGGTCAATAGA+GGG - tig0017277:3617-3636 None:intergenic 35.0%
! TTTTTGCTAAGGGTCAATAG+AGG - tig0017277:3618-3637 None:intergenic 35.0%
TATGTTGTCAATCTCGATAG+CGG - tig0017277:3868-3887 None:intergenic 35.0%
GTTTCAAACAACATGGAAAG+AGG - tig0017277:3893-3912 None:intergenic 35.0%
! TACTCTTTTTGTGGTTCAGA+TGG - tig0017277:4027-4046 Msa1360900:CDS 35.0%
GTATATCTGTTATTGAGTGC+CGG + tig0017277:4044-4063 Msa1360890:intron 35.0%
TATATCTGTTATTGAGTGCC+GGG + tig0017277:4045-4064 Msa1360890:intron 35.0%
TCTTATTCTCTAGTGTTCAG+AGG + tig0017277:4151-4170 Msa1360890:intron 35.0%
CTTTAAGCCATGGATATTAG+GGG + tig0017277:4186-4205 Msa1360890:intron 35.0%
GAAATTTCCCCTAATATCCA+TGG - tig0017277:4196-4215 Msa1360900:intron 35.0%
!! ACCTTTTTCTTTTGGGAATG+TGG + tig0017277:4419-4438 Msa1360890:intron 35.0%
TCCACATTCCCAAAAGAAAA+AGG - tig0017277:4423-4442 Msa1360900:CDS 35.0%
! GGTTGTGAATTCGAACTTTT+TGG - tig0017277:4530-4549 Msa1360900:intron 35.0%
GCCAATTAAGCCAATGTTAT+TGG - tig0017277:4551-4570 Msa1360900:intron 35.0%
GAATATTTCGCCTATTAAGG+AGG + tig0017277:4584-4603 Msa1360890:intron 35.0%
ATCGGAAAATCCTCCTTAAT+AGG - tig0017277:4597-4616 Msa1360900:intron 35.0%
AATCTCAGTTGACTGTATCT+CGG + tig0017277:4637-4656 Msa1360890:intron 35.0%
GAACAAATTCATCGAGTAGA+GGG - tig0017277:4688-4707 Msa1360900:intron 35.0%
AGAACAAATTCATCGAGTAG+AGG - tig0017277:4689-4708 Msa1360900:intron 35.0%
TGAAAATATTCCCCAAGATG+GGG - tig0017277:4907-4926 Msa1360900:CDS 35.0%
GTGAAAATATTCCCCAAGAT+GGG - tig0017277:4908-4927 Msa1360900:CDS 35.0%
TTAACGCTAAACATTGCCAA+TGG + tig0017277:4999-5018 Msa1360890:intron 35.0%
TAACGCTAAACATTGCCAAT+GGG + tig0017277:5000-5019 Msa1360890:intron 35.0%
AAAGATGATTTAGCCAGAGA+TGG + tig0017277:5333-5352 Msa1360890:intron 35.0%
! CATATGTATGTTCTAAGCAG+CGG - tig0017277:5390-5409 None:intergenic 35.0%
TTGTTGTCCCATCATAAAAC+TGG + tig0017277:5451-5470 Msa1360890:intron 35.0%
! CTAAATTTTCCTGCATGCAA+AGG - tig0017277:5487-5506 None:intergenic 35.0%
!! CCAGATAACTGCTTTTGTTT+TGG - tig0017277:6137-6156 None:intergenic 35.0%
CCAAAACAAAAGCAGTTATC+TGG + tig0017277:6134-6153 Msa1360890:intron 35.0%
!!! TGGTTCCATTTTGAAATACC+TGG - tig0017277:6289-6308 None:intergenic 35.0%
! ACACAACCACAGATTTTGAA+GGG + tig0017277:6646-6665 Msa1360890:CDS 35.0%
ATCCAATTATCATCACGTAC+CGG - tig0017277:6696-6715 None:intergenic 35.0%
TGCAATATCAAAATGGGTAC+AGG - tig0017277:6777-6796 None:intergenic 35.0%
TTCCACAAAAGGACAGTTTA+GGG - tig0017277:6873-6892 None:intergenic 35.0%
TTTCCACAAAAGGACAGTTT+AGG - tig0017277:6874-6893 None:intergenic 35.0%
TCAAATCTTATCCCACTAAG+TGG + tig0017277:7455-7474 Msa1360890:intron 35.0%
CAAATCTTATCCCACTAAGT+GGG + tig0017277:7456-7475 Msa1360890:intron 35.0%
ACATTATGTTCCCACTTAGT+GGG - tig0017277:7469-7488 None:intergenic 35.0%
AACATTATGTTCCCACTTAG+TGG - tig0017277:7470-7489 None:intergenic 35.0%
! TAGGCTGTTTGTGATTTTAG+AGG + tig0017277:7646-7665 Msa1360890:intron 35.0%
! AGGCTGTTTGTGATTTTAGA+GGG + tig0017277:7647-7666 Msa1360890:intron 35.0%
!! GTTTGTGATTTTAGAGGGAA+TGG + tig0017277:7652-7671 Msa1360890:intron 35.0%
AATCACTCTCTTAAACAAGG+GGG - tig0017277:7714-7733 None:intergenic 35.0%
GGGGAACTTCAAAAATGTAT+TGG - tig0017277:7851-7870 None:intergenic 35.0%
!!! TTTTGAAGTTCCCCCAAATT+AGG + tig0017277:7857-7876 Msa1360890:intron 35.0%
ACAAAATCCACCTAATTTGG+GGG - tig0017277:7870-7889 None:intergenic 35.0%
AGTAAGGAGAGTAGATCAAA+TGG - tig0017277:8059-8078 None:intergenic 35.0%
TTGATCTACTCTCCTTACTA+TGG + tig0017277:8060-8079 Msa1360890:intron 35.0%
!!! TCCACCATCTTTTTTACGAT+AGG + tig0017277:8131-8150 Msa1360890:intron 35.0%
ACCTATCGTAAAAAAGATGG+TGG - tig0017277:8135-8154 None:intergenic 35.0%
AGCACCTATCGTAAAAAAGA+TGG - tig0017277:8138-8157 None:intergenic 35.0%
CAACATTAGAGAAAGAATCG+GGG - tig0017277:8162-8181 None:intergenic 35.0%
CACAAGAATAAGATAAGCGT+AGG - tig0017277:8244-8263 None:intergenic 35.0%
CGCTTATCTTATTCTTGTGT+TGG + tig0017277:8245-8264 Msa1360890:intron 35.0%
TTTGTATGGGACATAGTGTT+GGG - tig0017277:8281-8300 None:intergenic 35.0%
! TTTTGTATGGGACATAGTGT+TGG - tig0017277:8282-8301 None:intergenic 35.0%
! GTAAGACTGGCAATTTTGTA+TGG - tig0017277:8295-8314 None:intergenic 35.0%
AATACTGCTCAAAGATGAAG+GGG - tig0017277:8336-8355 None:intergenic 35.0%
AAGTTAGGTGGTTGAAATGA+AGG - tig0017277:8386-8405 None:intergenic 35.0%
TGGAATGCAACTTTAGCAAA+AGG - tig0017277:8533-8552 None:intergenic 35.0%
ACTCTATCTTGCTTCTACAT+AGG + tig0017277:8556-8575 Msa1360890:intron 35.0%
TGAATGAAAAGCAACATCAG+AGG + tig0017277:8757-8776 Msa1360890:intron 35.0%
TTGTTGAAGATTATTGACGC+GGG + tig0017277:8816-8835 Msa1360890:intron 35.0%
AAGAACATATGTAAGTGGCA+TGG - tig0017277:8854-8873 None:intergenic 35.0%
TTGATAAATAGCAGCCATAG+CGG + tig0017277:8883-8902 Msa1360890:intron 35.0%
! CGCTATAGCATAATGGAATT+TGG + tig0017277:8914-8933 Msa1360890:intron 35.0%
!!! ATGGTTTTAATCACGGATAG+CGG - tig0017277:9037-9056 None:intergenic 35.0%
TCGTGCAAACTGATAGAAAT+TGG - tig0017277:9350-9369 None:intergenic 35.0%
TATTAAAAACCGAACCAGTC+AGG - tig0017277:9470-9489 None:intergenic 35.0%
!!! TGGTTCGGTTTTTAATACAC+TGG + tig0017277:9473-9492 Msa1360890:intron 35.0%
CTTTGCATGCCAACATTAAT+TGG - tig0017277:9930-9949 None:intergenic 35.0%
AACTTATAATCTCACATCCC+AGG + tig0017277:9965-9984 Msa1360890:CDS 35.0%
CACCATAAAAAAGGACAACA+AGG - tig0017277:10106-10125 None:intergenic 35.0%
CAGAAATCAAGACGTATGTA+AGG + tig0017277:10206-10225 Msa1360890:CDS 35.0%
TCCTCTATCATAGAGAAACT+TGG + tig0017277:10278-10297 Msa1360890:intron 35.0%
CTGGAAGAATTTCTTTGATG+TGG + tig0017277:10313-10332 Msa1360890:intron 35.0%
!! TCAATTTTCCCATGTTTTGG+CGG + tig0017277:10352-10371 Msa1360890:intron 35.0%
AGTAGTCCCTTGTGATATTT+AGG + tig0017277:10533-10552 Msa1360890:intron 35.0%
ATCCTTGTCGCTATTTATCA+AGG + tig0017277:10588-10607 Msa1360890:intron 35.0%
! GATTTTCCAGTGGTAAATCT+GGG - tig0017277:10701-10720 None:intergenic 35.0%
! TGATTTTCCAGTGGTAAATC+TGG - tig0017277:10702-10721 None:intergenic 35.0%
!!! GTTTTATGCTGATTTTCCAG+TGG - tig0017277:10711-10730 None:intergenic 35.0%
CATAAAACTGCTAAAACCAC+CGG + tig0017277:10723-10742 Msa1360890:intron 35.0%
TTATATGAACTCCGACAAAC+AGG - tig0017277:10753-10772 None:intergenic 35.0%
GCATACAACAAGCTTGTATT+AGG + tig0017277:10903-10922 Msa1360890:intron 35.0%
!! ACCTTTGAAATATAGAGAGG+AGG + tig0017277:11053-11072 Msa1360890:intron 35.0%
!! CCTTTGAAATATAGAGAGGA+GGG + tig0017277:11054-11073 Msa1360890:intron 35.0%
GGAAAAAAAGGGAGAAAATG+TGG + tig0017277:11088-11107 Msa1360890:intron 35.0%
AAGGGAGAAAATGTGGTTAA+AGG + tig0017277:11095-11114 Msa1360890:intron 35.0%
TTAAAACACGAGAGAATGAG+TGG + tig0017277:11125-11144 Msa1360890:intron 35.0%
CGATGTAAGAATTGAAGGTA+TGG - tig0017277:11415-11434 None:intergenic 35.0%
GATACCGATGTAAGAATTGA+AGG - tig0017277:11420-11439 None:intergenic 35.0%
AGTAGTTCAGGTATGCAAAA+AGG - tig0017277:11520-11539 None:intergenic 35.0%
TATGATGTCTCATGATTAGG+TGG + tig0017277:11580-11599 Msa1360890:intron 35.0%
AAAGCAGATCATCAGAATAC+CGG - tig0017277:11681-11700 None:intergenic 35.0%
TTATTCTGATGGAACACCAA+TGG + tig0017277:11778-11797 Msa1360890:three_prime_UTR 35.0%
ATGATCCCTAACAGTTTACA+CGG - tig0017277:11910-11929 None:intergenic 35.0%
AACTACAACAAGGTTACAGT+TGG - tig0017277:11955-11974 None:intergenic 35.0%
GGAGGACAACAAATTCAAAA+TGG - tig0017277:12056-12075 None:intergenic 35.0%
!! CAGTGTATTGGTTAATCGAC+TGG - tig0017277:299-318 None:intergenic 40.0%
ACAACTTTACAGTTGCACCA+AGG - tig0017277:454-473 None:intergenic 40.0%
AAGGTCACAAGTTAAAGTCC+TGG + tig0017277:488-507 Msa1360890:intron 40.0%
AGGTCACAAGTTAAAGTCCT+GGG + tig0017277:489-508 Msa1360890:intron 40.0%
AGCCTCTTGTGTAAAAGACA+AGG + tig0017277:515-534 Msa1360890:intron 40.0%
CCCATAACCTGTTCATAGAA+AGG - tig0017277:851-870 None:intergenic 40.0%
! TTCAGATAATGGCTTCAGAG+GGG - tig0017277:936-955 None:intergenic 40.0%
CCAAATAAGCGATGAGTGAT+GGG + tig0017277:1099-1118 Msa1360890:intron 40.0%
TGCAGGTTGTTGTAACCATT+TGG + tig0017277:1316-1335 Msa1360890:intron 40.0%
AAACATTATACCAGCGCTGT+TGG + tig0017277:1369-1388 Msa1360890:CDS 40.0%
!! GCTATCCTTAGTTTGACTTG+AGG + tig0017277:1597-1616 Msa1360890:intron 40.0%
GCATACACAAAACGTTGATG+TGG + tig0017277:1674-1693 Msa1360890:intron 40.0%
CTTCGGTACTCATAATCCAA+AGG + tig0017277:1753-1772 Msa1360890:intron 40.0%
! ACATTTAGATATGTGGGCTG+TGG + tig0017277:1866-1885 Msa1360890:intron 40.0%
! CATTTAGATATGTGGGCTGT+GGG + tig0017277:1867-1886 Msa1360890:intron 40.0%
ACCTTGAAGCCACTATTTCA+AGG + tig0017277:1912-1931 Msa1360890:CDS 40.0%
ACCTTGAAATAGTGGCTTCA+AGG - tig0017277:1916-1935 None:intergenic 40.0%
ACTTCTGCACCTTGAAATAG+TGG - tig0017277:1924-1943 None:intergenic 40.0%
! AGCTACACCAAATCCTTTTC+AGG + tig0017277:1947-1966 Msa1360890:CDS 40.0%
TCAGGTACCTGAAAAGGATT+TGG - tig0017277:1957-1976 None:intergenic 40.0%
TTAGCATCAGGTACCTGAAA+AGG - tig0017277:1963-1982 None:intergenic 40.0%
!! AAGCTGCAAGTTTTAGCATC+AGG - tig0017277:1975-1994 None:intergenic 40.0%
! AAGTTGATCAAGCTGCACAA+AGG - tig0017277:2065-2084 None:intergenic 40.0%
! TTTTTCTTTCTCCCTGCTGA+GGG + tig0017277:2126-2145 Msa1360890:intron 40.0%
AGAATGAAAATCCCTCAGCA+GGG - tig0017277:2140-2159 None:intergenic 40.0%
AATGTCCAAGTAAGTGGATC+TGG - tig0017277:2175-2194 None:intergenic 40.0%
! TTTTCTAATGTGGGATGACC+TGG - tig0017277:2207-2226 None:intergenic 40.0%
GTCATCCCACATTAGAAAAG+TGG + tig0017277:2208-2227 Msa1360890:CDS 40.0%
!!! GAAGGCCACTTTTCTAATGT+GGG - tig0017277:2216-2235 None:intergenic 40.0%
! TGAAGTATCTTGGTTCCAGT+GGG - tig0017277:2253-2272 None:intergenic 40.0%
! GAACGGATCCATTAGTTTCA+TGG - tig0017277:2515-2534 None:intergenic 40.0%
!! ATGCAGGACTTTTTGGAGAT+AGG - tig0017277:2584-2603 None:intergenic 40.0%
! AGGTCATATGCAGGACTTTT+TGG - tig0017277:2591-2610 None:intergenic 40.0%
ACTCGAGCATCTTTGACAAA+AGG - tig0017277:2611-2630 None:intergenic 40.0%
TTTACTGCGCCTCTATATGA+AGG + tig0017277:2658-2677 Msa1360890:intron 40.0%
ATCTTGTAGTTATGGTACGC+AGG + tig0017277:2844-2863 Msa1360890:intron 40.0%
GACAACATAGAAAGAGGTAG+GGG - tig0017277:2888-2907 None:intergenic 40.0%
GTGACAACATAGAAAGAGGT+AGG - tig0017277:2890-2909 None:intergenic 40.0%
GCTAGTGACAACATAGAAAG+AGG - tig0017277:2894-2913 None:intergenic 40.0%
! ATAGGGGCTTTTGTGTTTCA+TGG + tig0017277:3053-3072 Msa1360890:intron 40.0%
AATGAAGAAATGTGGCACCT+TGG + tig0017277:3193-3212 Msa1360890:intron 40.0%
CTTCATAGAACAGACTACCA+AGG - tig0017277:3213-3232 None:intergenic 40.0%
! CTTGGTAGTCTGTTCTATGA+AGG + tig0017277:3211-3230 Msa1360890:intron 40.0%
! AAGCTAACCCTAGTTCTCAA+GGG - tig0017277:3246-3265 None:intergenic 40.0%
! AAAGCTAACCCTAGTTCTCA+AGG - tig0017277:3247-3266 None:intergenic 40.0%
!! GAACTAGGGTTAGCTTTGAA+TGG + tig0017277:3250-3269 Msa1360890:intron 40.0%
ACACGATAGAATTCAAACCC+TGG + tig0017277:3304-3323 Msa1360890:intron 40.0%
CACGATAGAATTCAAACCCT+GGG + tig0017277:3305-3324 Msa1360890:intron 40.0%
CAGTAGGTTTGCAGACTAAA+AGG - tig0017277:3340-3359 None:intergenic 40.0%
!! GTATCAGATGAGGTATTGGA+GGG - tig0017277:3441-3460 None:intergenic 40.0%
!! TGTATCAGATGAGGTATTGG+AGG - tig0017277:3442-3461 None:intergenic 40.0%
TGAGTTCCTCCAAATTGGTT+TGG + tig0017277:3533-3552 Msa1360890:intron 40.0%
! GAGTTCCTCCAAATTGGTTT+GGG + tig0017277:3534-3553 Msa1360890:intron 40.0%
!! AGTTCCTCCAAATTGGTTTG+GGG + tig0017277:3535-3554 Msa1360890:intron 40.0%
!! TTTTGGGAGGAAAGGACTTT+GGG - tig0017277:3594-3613 None:intergenic 40.0%
! AAGGGTCAATAGAGGGTTTT+GGG - tig0017277:3610-3629 None:intergenic 40.0%
! TAAGGGTCAATAGAGGGTTT+TGG - tig0017277:3611-3630 None:intergenic 40.0%
! TTTTGCCTTATGATCGAGAC+CGG + tig0017277:3714-3733 Msa1360890:intron 40.0%
AAATGGGAAGATTGCAACAC+AGG - tig0017277:3966-3985 Msa1360900:CDS 40.0%
GCAATCTTCCCATTTACTAG+AGG + tig0017277:3971-3990 Msa1360890:intron 40.0%
CACTGCAACCTCTAGTAAAT+GGG - tig0017277:3982-4001 Msa1360900:CDS 40.0%
ACACTGCAACCTCTAGTAAA+TGG - tig0017277:3983-4002 Msa1360900:CDS 40.0%
TCCTAGAGAATACAACTTCC+TGG + tig0017277:4337-4356 Msa1360890:intron 40.0%
ACCAGGAAGTTGTATTCTCT+AGG - tig0017277:4341-4360 Msa1360900:intron 40.0%
TTGGCAAGTGACAATGTTCA+TGG - tig0017277:4472-4491 Msa1360900:CDS 40.0%
ATCTCAGTTGACTGTATCTC+GGG + tig0017277:4638-4657 Msa1360890:intron 40.0%
TTCATCGAGTAGAGGGAATT+GGG - tig0017277:4681-4700 Msa1360900:intron 40.0%
ATTCATCGAGTAGAGGGAAT+TGG - tig0017277:4682-4701 Msa1360900:intron 40.0%
CATGTGAAGCATACACAAGA+CGG - tig0017277:4789-4808 Msa1360900:intron 40.0%
GGTGAAAATATTCCCCAAGA+TGG - tig0017277:4909-4928 Msa1360900:CDS 40.0%
ACGGGATTCAGAAAAATGCT+TGG - tig0017277:4930-4949 None:intergenic 40.0%
TTTCTGAATCCCGTCTGATT+TGG + tig0017277:4936-4955 Msa1360890:intron 40.0%
CATAGTATCACAACTCCCAT+TGG - tig0017277:5018-5037 None:intergenic 40.0%
TGTGCAGATATGATCCGAAA+AGG + tig0017277:5220-5239 Msa1360890:intron 40.0%
ACAAAAGCAGTTATCTGGCT+CGG + tig0017277:6139-6158 Msa1360890:intron 40.0%
!! TTCCTTCCTCCTTTGCTATT+TGG + tig0017277:6336-6355 Msa1360890:intron 40.0%
TAATTCACAAAAGCCTCTCC+AGG - tig0017277:6609-6628 None:intergenic 40.0%
! GACACAACCACAGATTTTGA+AGG + tig0017277:6645-6664 Msa1360890:CDS 40.0%
!! TGATTTTAGAGGGAATGGGA+AGG + tig0017277:7657-7676 Msa1360890:intron 40.0%
TTGAAGGAAGTGAGAGCTTT+GGG - tig0017277:7930-7949 None:intergenic 40.0%
ATTGAAGGAAGTGAGAGCTT+TGG - tig0017277:7931-7950 None:intergenic 40.0%
!! CAGGGCCTTATAGTTTTTCT+AGG + tig0017277:8001-8020 Msa1360890:intron 40.0%
AGGAGAGTAGATCAAATGGA+GGG - tig0017277:8055-8074 None:intergenic 40.0%
AAGGAGAGTAGATCAAATGG+AGG - tig0017277:8056-8075 None:intergenic 40.0%
!! GACATGTCGATTCCATAGTA+AGG - tig0017277:8075-8094 None:intergenic 40.0%
!! AGATGGTGGAAACTCTACTT+AGG - tig0017277:8121-8140 None:intergenic 40.0%
AGGAAGTTGTGTTGAATGTG+TGG - tig0017277:8214-8233 None:intergenic 40.0%
TTAGGTGGTTGAAATGAAGG+AGG - tig0017277:8383-8402 None:intergenic 40.0%
ACCACCTAACTTGAATTCGA+TGG + tig0017277:8394-8413 Msa1360890:intron 40.0%
! ACCATCGAATTCAAGTTAGG+TGG - tig0017277:8398-8417 None:intergenic 40.0%
! AAATCGTGTAACTTGCGTTG+TGG + tig0017277:8467-8486 Msa1360890:intron 40.0%
CTATCTTGCTTCTACATAGG+CGG + tig0017277:8559-8578 Msa1360890:intron 40.0%
ATAGCGGTATAAAACCGCTA+TGG - tig0017277:8900-8919 None:intergenic 40.0%
!!! GTAGCCTGTTTTAACTGAAC+TGG + tig0017277:9318-9337 Msa1360890:intron 40.0%
CTGTCCAGTTCAGTTAAAAC+AGG - tig0017277:9325-9344 None:intergenic 40.0%
AATGCATGAGTGGTCTAGTA+TGG + tig0017277:9404-9423 Msa1360890:intron 40.0%
TACACTGGAATGAATTGCCT+AGG + tig0017277:9488-9507 Msa1360890:intron 40.0%
! AGGGTATTAGCATACTACAC+AGG + tig0017277:9764-9783 Msa1360890:intron 40.0%
TGCCAACATTAATTGGTCGA+GGG - tig0017277:9923-9942 None:intergenic 40.0%
ATGCCAACATTAATTGGTCG+AGG - tig0017277:9924-9943 None:intergenic 40.0%
TGTCTTCTGTTTGACAGTTG+AGG + tig0017277:10144-10163 Msa1360890:intron 40.0%
TTGAGGAGAAAAGACCCAAT+GGG + tig0017277:10161-10180 Msa1360890:CDS 40.0%
ATACGTCTTGATTTCTGCTG+TGG - tig0017277:10203-10222 None:intergenic 40.0%
CCACCTTTGTCATTACTATG+TGG - tig0017277:10249-10268 None:intergenic 40.0%
CCACATAGTAATGACAAAGG+TGG + tig0017277:10246-10265 Msa1360890:intron 40.0%
CATAGTAATGACAAAGGTGG+TGG + tig0017277:10249-10268 Msa1360890:intron 40.0%
GCCAAGTTTCTCTATGATAG+AGG - tig0017277:10282-10301 None:intergenic 40.0%
AAACTACTCCGCCAAAACAT+GGG - tig0017277:10363-10382 None:intergenic 40.0%
AAAACTACTCCGCCAAAACA+TGG - tig0017277:10364-10383 None:intergenic 40.0%
ATCACAAGGGACTACTAAAG+TGG - tig0017277:10529-10548 None:intergenic 40.0%
CCACAGCCTAAATATCACAA+GGG - tig0017277:10542-10561 None:intergenic 40.0%
GACCTTGATAAATAGCGACA+AGG - tig0017277:10593-10612 None:intergenic 40.0%
CAAGGTCATCAAAGTTGGAT+CGG + tig0017277:10606-10625 Msa1360890:intron 40.0%
GTACTAATTTGACCATACGC+AGG - tig0017277:10657-10676 None:intergenic 40.0%
! GTAAATCTGGGTTTTCTGCT+AGG - tig0017277:10689-10708 None:intergenic 40.0%
AGAAAACCCAGATTTACCAC+TGG + tig0017277:10692-10711 Msa1360890:intron 40.0%
CCCTCCTCTCTATATTTCAA+AGG - tig0017277:11057-11076 None:intergenic 40.0%
GAGAGGAGGGTTTAAGAATT+CGG + tig0017277:11067-11086 Msa1360890:intron 40.0%
GGAGAAAATGTGGTTAAAGG+TGG + tig0017277:11098-11117 Msa1360890:intron 40.0%
GATCATGATCGTCGTGAATT+AGG + tig0017277:11162-11181 Msa1360890:intron 40.0%
ATGATCGTCGTGAATTAGGA+TGG + tig0017277:11166-11185 Msa1360890:intron 40.0%
!! TCTGCTTTGAAATAGGACTC+TGG - tig0017277:11233-11252 None:intergenic 40.0%
GTCCATTCTCAGCTTAATTC+CGG + tig0017277:11389-11408 Msa1360890:intron 40.0%
! GTAAGAATTGAAGGTATGGC+CGG - tig0017277:11411-11430 None:intergenic 40.0%
CATACCTGAACTACTAGTGT+AGG + tig0017277:11525-11544 Msa1360890:intron 40.0%
TCATCCTACACTAGTAGTTC+AGG - tig0017277:11532-11551 None:intergenic 40.0%
TCGAAAACTTGAGCTAGTTC+AGG + tig0017277:11642-11661 Msa1360890:three_prime_UTR 40.0%
TTCAGGACAATTCGTAACTC+CGG + tig0017277:11659-11678 Msa1360890:three_prime_UTR 40.0%
ATGATCTGCTTTCATCCTTG+AGG + tig0017277:11689-11708 Msa1360890:three_prime_UTR 40.0%
AACAAAAAGTGAGGACCTCA+AGG - tig0017277:11707-11726 None:intergenic 40.0%
!! ATCAAGATTTGTTGCACACG+AGG + tig0017277:11736-11755 Msa1360890:three_prime_UTR 40.0%
AACACCAATGGAGTCATTGA+AGG + tig0017277:11790-11809 Msa1360890:three_prime_UTR 40.0%
ACACCAATGGAGTCATTGAA+GGG + tig0017277:11791-11810 Msa1360890:three_prime_UTR 40.0%
CATTGAAGGGGAATAAACAG+AGG + tig0017277:11804-11823 Msa1360890:three_prime_UTR 40.0%
AGAGGAAATAGTTGAGCTAC+TGG + tig0017277:11822-11841 Msa1360890:three_prime_UTR 40.0%
TACTGGTGGCATGTATATCA+TGG + tig0017277:11839-11858 Msa1360890:three_prime_UTR 40.0%
TTCCACCGTGTAAACTGTTA+GGG + tig0017277:11902-11921 Msa1360890:three_prime_UTR 40.0%
AAGGCAAGTGGCGTATAATT+GGG - tig0017277:12001-12020 None:intergenic 40.0%
ATACTGTGGCAGTTGCTGAA+TGG + tig0017277:327-346 Msa1360890:CDS 45.0%
! ATGGACTGAACTATCTGCAC+AGG + tig0017277:346-365 Msa1360890:CDS 45.0%
ACTGAACTATCTGCACAGGT+GGG + tig0017277:350-369 Msa1360890:intron 45.0%
TTACACAAGAGGCTATTCCC+AGG - tig0017277:509-528 None:intergenic 45.0%
CATACATAAGGTCCAGGAAG+GGG - tig0017277:574-593 None:intergenic 45.0%
GCATACATAAGGTCCAGGAA+GGG - tig0017277:575-594 None:intergenic 45.0%
AGCATACATAAGGTCCAGGA+AGG - tig0017277:576-595 None:intergenic 45.0%
CTTCAGCATACATAAGGTCC+AGG - tig0017277:580-599 None:intergenic 45.0%
! ATGCTGAAGCTTTAGTGCAC+CGG + tig0017277:591-610 Msa1360890:intron 45.0%
TATGAACAGGTTATGGGCGA+TGG + tig0017277:854-873 Msa1360890:intron 45.0%
! TTTGGCTTACAGCAGAAAGC+CGG - tig0017277:1084-1103 None:intergenic 45.0%
GCCAAATAAGCGATGAGTGA+TGG + tig0017277:1098-1117 Msa1360890:intron 45.0%
CCCATCACTCATCGCTTATT+TGG - tig0017277:1102-1121 None:intergenic 45.0%
TTAGCTCCAAGAAGCAACTC+CGG - tig0017277:1351-1370 None:intergenic 45.0%
TTTAAGGATACCAACAGCGC+TGG - tig0017277:1382-1401 None:intergenic 45.0%
! GTTTTTCTTTCTCCCTGCTG+AGG + tig0017277:2125-2144 Msa1360890:intron 45.0%
GAGAATGAAAATCCCTCAGC+AGG - tig0017277:2141-2160 None:intergenic 45.0%
TTGGACATTGTTACTGTGCC+AGG + tig0017277:2186-2205 Msa1360890:intron 45.0%
!!! GGAAGGCCACTTTTCTAATG+TGG - tig0017277:2217-2236 None:intergenic 45.0%
! GAAGTATCTTGGTTCCAGTG+GGG - tig0017277:2252-2271 None:intergenic 45.0%
! GTGAAGTATCTTGGTTCCAG+TGG - tig0017277:2254-2273 None:intergenic 45.0%
GGACTCGACACTGTGAAAAT+AGG - tig0017277:2340-2359 None:intergenic 45.0%
CGCAGTAAAAACCTTCGCAA+TGG - tig0017277:2647-2666 None:intergenic 45.0%
GAAAGAGGTAGGGGAAGTTT+GGG - tig0017277:2879-2898 None:intergenic 45.0%
AGAAAGAGGTAGGGGAAGTT+TGG - tig0017277:2880-2899 None:intergenic 45.0%
! ACCACGATTAGCCACAAAAG+TGG - tig0017277:2918-2937 None:intergenic 45.0%
! ACTTTTGTGGCTAATCGTGG+TGG + tig0017277:2917-2936 Msa1360890:intron 45.0%
TGCAAAACATTCTGCAGGTG+CGG + tig0017277:2955-2974 Msa1360890:intron 45.0%
!! GGCGCAATTCTAGAGCAATT+GGG - tig0017277:3010-3029 None:intergenic 45.0%
TGGCTGTGGCATGACAAAAT+CGG - tig0017277:3031-3050 None:intergenic 45.0%
TGTCATGCCACAGCCATTAT+AGG + tig0017277:3035-3054 Msa1360890:intron 45.0%
GTCATGCCACAGCCATTATA+GGG + tig0017277:3036-3055 Msa1360890:intron 45.0%
TCATGCCACAGCCATTATAG+GGG + tig0017277:3037-3056 Msa1360890:intron 45.0%
AAAAGCCCCTATAATGGCTG+TGG - tig0017277:3045-3064 None:intergenic 45.0%
!! GTATCAGAGGAGGTATTGGA+GGG - tig0017277:3507-3526 None:intergenic 45.0%
!! TGTATCAGAGGAGGTATTGG+AGG - tig0017277:3508-3527 None:intergenic 45.0%
!! GTTCCTCCAAATTGGTTTGG+GGG + tig0017277:3536-3555 Msa1360890:intron 45.0%
!! TTCCTCCAAATTGGTTTGGG+GGG + tig0017277:3537-3556 Msa1360890:intron 45.0%
TTTGGGAGGAAAGGACTTTG+GGG - tig0017277:3593-3612 None:intergenic 45.0%
!!! GTTTTGGGAGGAAAGGACTT+TGG - tig0017277:3595-3614 None:intergenic 45.0%
!!! ATAGAGGGTTTTGGGAGGAA+AGG - tig0017277:3602-3621 None:intergenic 45.0%
CCAGCTCCGAAACCAAATAT+TGG - tig0017277:3835-3854 None:intergenic 45.0%
! CCAATATTTGGTTTCGGAGC+TGG + tig0017277:3832-3851 Msa1360890:intron 45.0%
GGTTCAGATGGTGATTCACA+AGG - tig0017277:4015-4034 Msa1360900:CDS 45.0%
TGTTCATGGTGGTCACTGTA+GGG - tig0017277:4458-4477 Msa1360900:CDS 45.0%
ATGTTCATGGTGGTCACTGT+AGG - tig0017277:4459-4478 Msa1360900:CDS 45.0%
GCAAGTGACAATGTTCATGG+TGG - tig0017277:4469-4488 Msa1360900:CDS 45.0%
TCATCGAGTAGAGGGAATTG+GGG - tig0017277:4680-4699 Msa1360900:intron 45.0%
CACTCAGTTGCAGAATAAGG+GGG - tig0017277:4832-4851 Msa1360900:CDS 45.0%
GCACTCAGTTGCAGAATAAG+GGG - tig0017277:4833-4852 Msa1360900:CDS 45.0%
CGCACTCAGTTGCAGAATAA+GGG - tig0017277:4834-4853 Msa1360900:CDS 45.0%
CCTTATTCTGCAACTGAGTG+CGG + tig0017277:4832-4851 Msa1360890:intron 45.0%
CTTATTCTGCAACTGAGTGC+GGG + tig0017277:4833-4852 Msa1360890:intron 45.0%
CTTCGTAATAGCCCCATCTT+GGG + tig0017277:4893-4912 Msa1360890:intron 45.0%
TTCGTAATAGCCCCATCTTG+GGG + tig0017277:4894-4913 Msa1360890:intron 45.0%
CATGGTATGCCAAATCAGAC+GGG - tig0017277:4948-4967 None:intergenic 45.0%
GCATGGTATGCCAAATCAGA+CGG - tig0017277:4949-4968 None:intergenic 45.0%
TTGGCATACCATGCTGTGAT+AGG + tig0017277:4955-4974 Msa1360890:intron 45.0%
ATACGCATGCCGCTAATAGA+GGG - tig0017277:5197-5216 None:intergenic 45.0%
AATACGCATGCCGCTAATAG+AGG - tig0017277:5198-5217 None:intergenic 45.0%
TTTAGCCAGAGATGGATCTC+AGG + tig0017277:5341-5360 Msa1360890:intron 45.0%
TTAGCCAGAGATGGATCTCA+GGG + tig0017277:5342-5361 Msa1360890:intron 45.0%
! ATGTATGTTCTAAGCAGCGG+TGG - tig0017277:5387-5406 None:intergenic 45.0%
ATCATGTGACCTTTGCATGC+AGG + tig0017277:5475-5494 Msa1360890:intron 45.0%
TTCAAAATGGAACCACAGCC+TGG + tig0017277:6294-6313 Msa1360890:CDS 45.0%
GCAAAGGAGGAAGGAAGAAA+AGG - tig0017277:6332-6351 None:intergenic 45.0%
AGACCAACGCCAAATAGCAA+AGG - tig0017277:6348-6367 None:intergenic 45.0%
TGTGAATTATCCCACACGTC+CGG + tig0017277:6620-6639 Msa1360890:CDS 45.0%
AAATCTGTGGTTGTGTCCAC+CGG - tig0017277:6642-6661 None:intergenic 45.0%
GGTTGTCCCTTCAAAATCTG+TGG - tig0017277:6655-6674 None:intergenic 45.0%
AGCCGGTACGTGATGATAAT+TGG + tig0017277:6691-6710 Msa1360890:intron 45.0%
! GTCCCTAAACTGTCCTTTTG+TGG + tig0017277:6868-6887 Msa1360890:intron 45.0%
AAGCTGGGTCAACAGTTATG+CGG - tig0017277:7226-7245 None:intergenic 45.0%
TAGGCTGTTTGTGAGTTCAG+AGG + tig0017277:7545-7564 Msa1360890:intron 45.0%
AGGCTGTTTGTGAGTTCAGA+GGG + tig0017277:7546-7565 Msa1360890:intron 45.0%
TTTGTGAGTTCAGAGGGAGT+GGG + tig0017277:7552-7571 Msa1360890:intron 45.0%
TGAAGTTCCCCCAAATTAGG+TGG + tig0017277:7860-7879 Msa1360890:intron 45.0%
TTTGCGAGTTTGGAGGGAAA+GGG - tig0017277:7981-8000 None:intergenic 45.0%
AGTCAAATCACTAGAGGCAG+AGG - tig0017277:8031-8050 None:intergenic 45.0%
GAGGGTAGTCAAATCACTAG+AGG - tig0017277:8037-8056 None:intergenic 45.0%
AGATAAGCGTAGGAGAGATG+AGG - tig0017277:8234-8253 None:intergenic 45.0%
!! CAGAGGCATCAACGAACATA+TGG + tig0017277:8774-8793 Msa1360890:intron 45.0%
! ACGCAATAGTGCCACTAAAG+CGG - tig0017277:8987-9006 None:intergenic 45.0%
TTAGTGGCACTATTGCGTAG+CGG + tig0017277:8989-9008 Msa1360890:intron 45.0%
!! TAGAGGCATCAACAGACAGA+TGG + tig0017277:9203-9222 Msa1360890:intron 45.0%
TCAGTTTGCACGAGTTTGAC+TGG + tig0017277:9357-9376 Msa1360890:intron 45.0%
GACCAGTTCAAATGCATGAG+TGG + tig0017277:9394-9413 Msa1360890:intron 45.0%
GACCACTCATGCATTTGAAC+TGG - tig0017277:9399-9418 None:intergenic 45.0%
!!! CCAATCATGGGTCTGGTTTT+CGG + tig0017277:9435-9454 Msa1360890:intron 45.0%
AACAAAACTTGGGGAAGCCT+AGG - tig0017277:9508-9527 None:intergenic 45.0%
CATACTACACAGGCAAGCAT+AGG + tig0017277:9774-9793 Msa1360890:intron 45.0%
GTCCCTCGACCAATTAATGT+TGG + tig0017277:9918-9937 Msa1360890:CDS 45.0%
TATAATCTCACATCCCAGGC+AGG + tig0017277:9969-9988 Msa1360890:CDS 45.0%
ATAATCTCACATCCCAGGCA+GGG + tig0017277:9970-9989 Msa1360890:CDS 45.0%
AGCAGTGGAATTAATCCTGC+TGG + tig0017277:9996-10015 Msa1360890:CDS 45.0%
ACAAACCTGTTGCTGCTGAT+GGG - tig0017277:10054-10073 None:intergenic 45.0%
AACAAACCTGTTGCTGCTGA+TGG - tig0017277:10055-10074 None:intergenic 45.0%
GTTGAGGAGAAAAGACCCAA+TGG + tig0017277:10160-10179 Msa1360890:intron 45.0%
GATATCCTGGCATTCCCATT+GGG - tig0017277:10178-10197 None:intergenic 45.0%
CCCTTGTGATATTTAGGCTG+TGG + tig0017277:10539-10558 Msa1360890:intron 45.0%
GCCACAGCCTAAATATCACA+AGG - tig0017277:10543-10562 None:intergenic 45.0%
GTCATCAAAGTTGGATCGGT+CGG + tig0017277:10610-10629 Msa1360890:intron 45.0%
GCCTCTTTAATTCCTCAGTG+TGG + tig0017277:10836-10855 Msa1360890:intron 45.0%
GCCACACTGAGGAATTAAAG+AGG - tig0017277:10840-10859 None:intergenic 45.0%
TTAATTCCTCAGTGTGGCTC+CGG + tig0017277:10842-10861 Msa1360890:intron 45.0%
!! ACAAGCTTGTTGTATGCCTC+TGG - tig0017277:10900-10919 None:intergenic 45.0%
CACCAATGGAGTCATTGAAG+GGG + tig0017277:11792-11811 Msa1360890:three_prime_UTR 45.0%
TTCCCCTTCAATGACTCCAT+TGG - tig0017277:11797-11816 None:intergenic 45.0%
GGAAATAGTTGAGCTACTGG+TGG + tig0017277:11825-11844 Msa1360890:three_prime_UTR 45.0%
GTTCCACCGTGTAAACTGTT+AGG + tig0017277:11901-11920 Msa1360890:three_prime_UTR 45.0%
ATCCCTAACAGTTTACACGG+TGG - tig0017277:11907-11926 None:intergenic 45.0%
TGGCGTATAATTGGGGATTG+AGG - tig0017277:11993-12012 None:intergenic 45.0%
AGGCAAGTGGCGTATAATTG+GGG - tig0017277:12000-12019 None:intergenic 45.0%
CAAGGCAAGTGGCGTATAAT+TGG - tig0017277:12002-12021 None:intergenic 45.0%
!! TACAAAAATAAATAAATAAA+AGG - tig0017277:404-423 None:intergenic 5.0%
!!! AAATTATATTTTAGTATTAT+CGG + tig0017277:11367-11386 Msa1360890:intron 5.0%
!! AAATATATATAATTTACATT+GGG - tig0017277:12028-12047 None:intergenic 5.0%
!! AAAATATATATAATTTACAT+TGG - tig0017277:12029-12048 None:intergenic 5.0%
GACTGAACTATCTGCACAGG+TGG + tig0017277:349-368 Msa1360890:intron 50.0%
GTTGAATAAAGGGGGAGCCT+TGG + tig0017277:434-453 Msa1360890:intron 50.0%
! TGCTGAAGCTTTAGTGCACC+GGG + tig0017277:592-611 Msa1360890:intron 50.0%
!! TTGCTGACTTTGGGCTTGCA+AGG + tig0017277:900-919 Msa1360890:CDS 50.0%
ACACGTCAAGTTTCGACAGC+AGG - tig0017277:1166-1185 None:intergenic 50.0%
AACCATTTGGTACCGTGCTC+CGG + tig0017277:1329-1348 Msa1360890:CDS 50.0%
ACACACACACACACACAGAG+GGG - tig0017277:1446-1465 None:intergenic 50.0%
CACACACACACACACACAGA+GGG - tig0017277:1447-1466 None:intergenic 50.0%
ACACACACACACACACACAG+AGG - tig0017277:1448-1467 None:intergenic 50.0%
TGGGGAAGATGTGCTAAGGA+AGG - tig0017277:2234-2253 None:intergenic 50.0%
!!! TGTCACTAGCGCCACTTTTG+TGG + tig0017277:2904-2923 Msa1360890:intron 50.0%
!!! GCCACTTTTGTGGCTAATCG+TGG + tig0017277:2914-2933 Msa1360890:intron 50.0%
! GGCTAATCGTGGTGGAGTTA+TGG + tig0017277:2925-2944 Msa1360890:intron 50.0%
! CCTGCAGAATGTTTTGCAGC+AGG - tig0017277:2953-2972 None:intergenic 50.0%
CCTGCTGCAAAACATTCTGC+AGG + tig0017277:2950-2969 Msa1360890:intron 50.0%
!! CGGCGCAATTCTAGAGCAAT+TGG - tig0017277:3011-3030 None:intergenic 50.0%
!! GGGTTAGCTTTGAATGGGCT+TGG + tig0017277:3256-3275 Msa1360890:intron 50.0%
! TAAAAGGGCTGCTTTGCCCA+GGG - tig0017277:3324-3343 None:intergenic 50.0%
!! CAGGATGGTAGTGGTTCAGT+AGG - tig0017277:3356-3375 None:intergenic 50.0%
!! TCCTCCAAATTGGTTTGGGG+GGG + tig0017277:3538-3557 Msa1360890:intron 50.0%
!!! GGTCAATAGAGGGTTTTGGG+AGG - tig0017277:3607-3626 None:intergenic 50.0%
TTCCTCCGGTCTCGATCATA+AGG - tig0017277:3722-3741 None:intergenic 50.0%
GAGGGAATTGGGGAATTCTC+AGG - tig0017277:4670-4689 Msa1360900:intron 50.0%
TCACGCCTGTGCTAGAAATG+TGG + tig0017277:4735-4754 Msa1360890:intron 50.0%
!! GTCTGCCACATTTCTAGCAC+AGG - tig0017277:4743-4762 Msa1360900:intron 50.0%
TGAAGCATACACAAGACGGC+TGG - tig0017277:4785-4804 Msa1360900:intron 50.0%
CCGCACTCAGTTGCAGAATA+AGG - tig0017277:4835-4854 Msa1360900:CDS 50.0%
CCAAGATGGGGCTATTACGA+AGG - tig0017277:4895-4914 Msa1360900:CDS 50.0%
CCTTCGTAATAGCCCCATCT+TGG + tig0017277:4892-4911 Msa1360890:intron 50.0%
TGTGGCATCCTATCACAGCA+TGG - tig0017277:4966-4985 None:intergenic 50.0%
AAATGGAACCACAGCCTGGA+CGG + tig0017277:6298-6317 Msa1360890:CDS 50.0%
AAAAGGCCTTACTTCCGTCC+AGG - tig0017277:6315-6334 None:intergenic 50.0%
CGCCAAATAGCAAAGGAGGA+AGG - tig0017277:6341-6360 None:intergenic 50.0%
CCAACGCCAAATAGCAAAGG+AGG - tig0017277:6345-6364 None:intergenic 50.0%
!! CCTCCTTTGCTATTTGGCGT+TGG + tig0017277:6342-6361 Msa1360890:intron 50.0%
TGGCATGGTACAAGTGCACT+GGG - tig0017277:6585-6604 None:intergenic 50.0%
TTGGCATGGTACAAGTGCAC+TGG - tig0017277:6586-6605 None:intergenic 50.0%
TCACAAAAGCCTCTCCAGGT+TGG - tig0017277:6605-6624 None:intergenic 50.0%
CAACATGCAGCAATCACAGC+CGG + tig0017277:6674-6693 Msa1360890:CDS 50.0%
! AATCGGCTCACTGATCGACA+TGG + tig0017277:7155-7174 Msa1360890:intron 50.0%
CTCACTGATCGACATGGTCA+GGG + tig0017277:7161-7180 Msa1360890:intron 50.0%
TGAGTAACTGGTCGAACCTG+TGG + tig0017277:7187-7206 Msa1360890:intron 50.0%
GAGTAACTGGTCGAACCTGT+GGG + tig0017277:7188-7207 Msa1360890:intron 50.0%
CAACAGTTATGCGGCTCAAC+TGG - tig0017277:7217-7236 None:intergenic 50.0%
GTTTGTGAGTTCAGAGGGAG+TGG + tig0017277:7551-7570 Msa1360890:intron 50.0%
TAGAGGGAATGGGAAGGCTT+TGG + tig0017277:7663-7682 Msa1360890:intron 50.0%
AGAGGGAATGGGAAGGCTTT+GGG + tig0017277:7664-7683 Msa1360890:intron 50.0%
!! GGAAGTGAGAGCTTTGGGAA+GGG - tig0017277:7925-7944 None:intergenic 50.0%
!! AGGAAGTGAGAGCTTTGGGA+AGG - tig0017277:7926-7945 None:intergenic 50.0%
GTTTGCGAGTTTGGAGGGAA+AGG - tig0017277:7982-8001 None:intergenic 50.0%
TTCCCTCCAAACTCGCAAAC+AGG + tig0017277:7982-8001 Msa1360890:intron 50.0%
TCCCTCCAAACTCGCAAACA+GGG + tig0017277:7983-8002 Msa1360890:intron 50.0%
TAAGGCCCTGTTTGCGAGTT+TGG - tig0017277:7991-8010 None:intergenic 50.0%
! GTATGGGACATAGTGTTGGG+CGG - tig0017277:8278-8297 None:intergenic 50.0%
TCAACGAACATATGGCGCAG+TGG + tig0017277:8782-8801 Msa1360890:intron 50.0%
TCAACAGACAGATGGTGCAG+TGG + tig0017277:9211-9230 Msa1360890:intron 50.0%
TGATGCAAGTGGCCTGATCA+AGG - tig0017277:9277-9296 None:intergenic 50.0%
TATGGCGACTGGACCAATCA+TGG + tig0017277:9422-9441 Msa1360890:intron 50.0%
ATGGCGACTGGACCAATCAT+GGG + tig0017277:9423-9442 Msa1360890:intron 50.0%
CCGAAAACCAGACCCATGAT+TGG - tig0017277:9438-9457 None:intergenic 50.0%
AAAAACCGAACCAGTCAGGC+TGG - tig0017277:9466-9485 None:intergenic 50.0%
TACCTGAGTCAGGTTTCGTC+TGG + tig0017277:9846-9865 Msa1360890:intron 50.0%
GCTATTGCTGGAAACATGCC+TGG + tig0017277:9873-9892 Msa1360890:CDS 50.0%
ATTGCTGGAAACATGCCTGG+TGG + tig0017277:9876-9895 Msa1360890:CDS 50.0%
CTATTTGACGCATGACCACC+AGG - tig0017277:9894-9913 None:intergenic 50.0%
GTGGAACACCTCGTTGCATT+GGG - tig0017277:10025-10044 None:intergenic 50.0%
TGTGGAACACCTCGTTGCAT+TGG - tig0017277:10026-10045 None:intergenic 50.0%
AAAGACCCAATGGGAATGCC+AGG + tig0017277:10170-10189 Msa1360890:CDS 50.0%
GGATATCCTGGCATTCCCAT+TGG - tig0017277:10179-10198 None:intergenic 50.0%
TTCTGCTGTGGAGGATATCC+TGG - tig0017277:10191-10210 None:intergenic 50.0%
CGTCTTGATTTCTGCTGTGG+AGG - tig0017277:10200-10219 None:intergenic 50.0%
AACCGAAACAGACCTGCGTA+TGG + tig0017277:10642-10661 Msa1360890:intron 50.0%
GACCATACGCAGGTCTGTTT+CGG - tig0017277:10647-10666 None:intergenic 50.0%
GGCCGGAATTAAGCTGAGAA+TGG - tig0017277:11394-11413 None:intergenic 50.0%
!! AGATTTGTTGCACACGAGGC+TGG + tig0017277:11740-11759 Msa1360890:three_prime_UTR 50.0%
ACATTGGGGATCAAGGCAAG+TGG - tig0017277:12013-12032 None:intergenic 50.0%
! GAAGGGGTCCCACCATTTTG+TGG - tig0017277:558-577 None:intergenic 55.0%
! AAAATGGTGGGACCCCTTCC+TGG + tig0017277:559-578 Msa1360890:intron 55.0%
ACAGGTTATGGGCGATGGTG+AGG + tig0017277:859-878 Msa1360890:intron 55.0%
ATGGGCGATGGTGAGGAACA+CGG + tig0017277:866-885 Msa1360890:CDS 55.0%
CAAGAAGCAACTCCGGAGCA+CGG - tig0017277:1344-1363 None:intergenic 55.0%
ACAGAGGGGGAAGGAAGAGA+GGG - tig0017277:1432-1451 None:intergenic 55.0%
CACACACACACACACAGAGG+GGG - tig0017277:1445-1464 None:intergenic 55.0%
CCAGTGGGGAAGATGTGCTA+AGG - tig0017277:2238-2257 None:intergenic 55.0%
CCTTAGCACATCTTCCCCAC+TGG + tig0017277:2235-2254 Msa1360890:CDS 55.0%
! GCAGGTGCGGTGTGTTTTTC+AGG + tig0017277:2968-2987 Msa1360890:intron 55.0%
! CTAAAAGGGCTGCTTTGCCC+AGG - tig0017277:3325-3344 None:intergenic 55.0%
!! CCTCCAAATTGGTTTGGGGG+GGG + tig0017277:3539-3558 Msa1360890:intron 55.0%
!! CTCCAAATTGGTTTGGGGGG+GGG + tig0017277:3540-3559 Msa1360890:intron 55.0%
!! TCCAAATTGGTTTGGGGGGG+GGG + tig0017277:3541-3560 Msa1360890:intron 55.0%
TGCCTTATGATCGAGACCGG+AGG + tig0017277:3717-3736 Msa1360890:intron 55.0%
TGGTCACTGTAGGGCAGGTT+GGG - tig0017277:4449-4468 Msa1360900:CDS 55.0%
GAATAAGGGGGTCACTCTCG+AGG - tig0017277:4820-4839 Msa1360900:CDS 55.0%
CCAGAGATGGATCTCAGGGA+GGG + tig0017277:5346-5365 Msa1360890:intron 55.0%
GCACTTGTACCATGCCAACC+TGG + tig0017277:6588-6607 Msa1360890:CDS 55.0%
TGTACCATGCCAACCTGGAG+AGG + tig0017277:6593-6612 Msa1360890:CDS 55.0%
! AAAGCCTCTCCAGGTTGGCA+TGG - tig0017277:6600-6619 None:intergenic 55.0%
GAATTATCCCACACGTCCGG+TGG + tig0017277:6623-6642 Msa1360890:CDS 55.0%
CGGCTGTGATTGCTGCATGT+TGG - tig0017277:6676-6695 None:intergenic 55.0%
GCTCACTGATCGACATGGTC+AGG + tig0017277:7160-7179 Msa1360890:intron 55.0%
!! TGGTCAGGGCACTGAGTAAC+TGG + tig0017277:7175-7194 Msa1360890:intron 55.0%
TGAGTTCAGAGGGAGTGGGA+AGG + tig0017277:7556-7575 Msa1360890:intron 55.0%
!! AGTGAGAGCTTTGGGAAGGG+AGG - tig0017277:7922-7941 None:intergenic 55.0%
CGAGTTTGGAGGGAAAGGGA+GGG - tig0017277:7977-7996 None:intergenic 55.0%
GCCCTGTTTGCGAGTTTGGA+GGG - tig0017277:7987-8006 None:intergenic 55.0%
TGCGGGTTCGATCCTTGATC+AGG + tig0017277:9262-9281 Msa1360890:intron 55.0%
GAGTGGTCTAGTATGGCGAC+TGG + tig0017277:9411-9430 Msa1360890:intron 55.0%
GACTGGACCAATCATGGGTC+TGG + tig0017277:9428-9447 Msa1360890:intron 55.0%
! TCAGACCAGCCTGACTGGTT+CGG + tig0017277:9458-9477 Msa1360890:intron 55.0%
CTCCAGACGAAACCTGACTC+AGG - tig0017277:9851-9870 None:intergenic 55.0%
! TCGTCTGGAGCTGCTATTGC+TGG + tig0017277:9861-9880 Msa1360890:CDS 55.0%
! GCAACGAGGTGTTCCACAAC+AGG + tig0017277:10028-10047 Msa1360890:CDS 55.0%
ACTCCGACAAACAGGCTGAC+CGG - tig0017277:10745-10764 None:intergenic 55.0%
CTCCGGAGCACGGTACCAAA+TGG - tig0017277:1334-1353 None:intergenic 60.0%
CGTGCTCCGGAGTTGCTTCT+TGG + tig0017277:1342-1361 Msa1360890:CDS 60.0%
CACAGAGGGGGAAGGAAGAG+AGG - tig0017277:1433-1452 None:intergenic 60.0%
CACACACACACAGAGGGGGA+AGG - tig0017277:1441-1460 None:intergenic 60.0%
CCCCCCCCAAACCAATTTGG+AGG - tig0017277:3542-3561 None:intergenic 60.0%
ACCCCCCCCCCAAACCAATT+TGG - tig0017277:3545-3564 None:intergenic 60.0%
GTGGTCACTGTAGGGCAGGT+TGG - tig0017277:4450-4469 Msa1360900:CDS 60.0%
CATGGTGGTCACTGTAGGGC+AGG - tig0017277:4454-4473 Msa1360900:CDS 60.0%
GCCAGAGATGGATCTCAGGG+AGG + tig0017277:5345-5364 Msa1360890:intron 60.0%
CCCTCCCTGAGATCCATCTC+TGG - tig0017277:5349-5368 None:intergenic 60.0%
GATCTCAGGGAGGGCAAGCA+CGG + tig0017277:5355-5374 Msa1360890:intron 60.0%
ATCTCAGGGAGGGCAAGCAC+GGG + tig0017277:5356-5375 Msa1360890:intron 60.0%
CCTTACTTCCGTCCAGGCTG+TGG - tig0017277:6309-6328 None:intergenic 60.0%
CCACAGCCTGGACGGAAGTA+AGG + tig0017277:6306-6325 Msa1360890:intron 60.0%
GTTGTGTCCACCGGACGTGT+GGG - tig0017277:6633-6652 None:intergenic 60.0%
!! GGGAATGGGAAGGCTTTGGG+CGG + tig0017277:7667-7686 Msa1360890:intron 60.0%
GCGAGTTTGGAGGGAAAGGG+AGG - tig0017277:7978-7997 None:intergenic 60.0%
GGCCCTGTTTGCGAGTTTGG+AGG - tig0017277:7988-8007 None:intergenic 60.0%
TTCGGTCAGACCAGCCTGAC+TGG + tig0017277:9453-9472 Msa1360890:intron 60.0%
CAGGCAAGCATAGGCACGCA+TGG + tig0017277:9783-9802 Msa1360890:intron 60.0%
TCCACTGCTCATCCCTGCCT+GGG - tig0017277:9985-10004 None:intergenic 60.0%
TTCCACTGCTCATCCCTGCC+TGG - tig0017277:9986-10005 None:intergenic 60.0%
CGTTGCATTGGGATGCCAGC+AGG - tig0017277:10014-10033 None:intergenic 60.0%
GCTGGCATCCCAATGCAACG+AGG + tig0017277:10014-10033 Msa1360890:CDS 60.0%
! TGCTGCTGATGGGCCTGTTG+TGG - tig0017277:10044-10063 None:intergenic 60.0%
ACAGGCCCATCAGCAGCAAC+AGG + tig0017277:10046-10065 Msa1360890:CDS 60.0%
CCACCGGTCAGCCTGTTTGT+CGG + tig0017277:10739-10758 Msa1360890:intron 60.0%
AGCAAACCGGAGCCACACTG+AGG - tig0017277:10851-10870 None:intergenic 60.0%
GGTTGTGTCCACCGGACGTG+TGG - tig0017277:6634-6653 None:intergenic 65.0%
CGGCTCAACTGGTGACCCAC+AGG - tig0017277:7206-7225 None:intergenic 65.0%
GGGAGTGGGAAGGCTTTGCG+AGG + tig0017277:7566-7585 Msa1360890:intron 65.0%
TCCCAGGCAGGGATGAGCAG+TGG + tig0017277:9981-10000 Msa1360890:CDS 65.0%
CCGACAAACAGGCTGACCGG+TGG - tig0017277:10742-10761 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0017277 gene 246 12096 246 ID=Msa1360890;Name=Msa1360890
tig0017277 mRNA 246 12096 246 ID=Msa1360890-mRNA-1;Parent=Msa1360890;Name=Msa1360890-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.92|1|0.46|0.57|14|499|363
tig0017277 exon 246 367 246 ID=Msa1360890-mRNA-1:exon:12120;Parent=Msa1360890-mRNA-1
tig0017277 exon 667 709 667 ID=Msa1360890-mRNA-1:exon:12121;Parent=Msa1360890-mRNA-1
tig0017277 exon 863 961 863 ID=Msa1360890-mRNA-1:exon:12122;Parent=Msa1360890-mRNA-1
tig0017277 exon 1321 1390 1321 ID=Msa1360890-mRNA-1:exon:12123;Parent=Msa1360890-mRNA-1
tig0017277 exon 1874 1968 1874 ID=Msa1360890-mRNA-1:exon:12124;Parent=Msa1360890-mRNA-1
tig0017277 exon 2073 2106 2073 ID=Msa1360890-mRNA-1:exon:12125;Parent=Msa1360890-mRNA-1
tig0017277 exon 2208 2292 2208 ID=Msa1360890-mRNA-1:exon:12126;Parent=Msa1360890-mRNA-1
tig0017277 exon 2551 2628 2551 ID=Msa1360890-mRNA-1:exon:12127;Parent=Msa1360890-mRNA-1
tig0017277 exon 5227 5274 5227 ID=Msa1360890-mRNA-1:exon:12128;Parent=Msa1360890-mRNA-1
tig0017277 exon 6290 6322 6290 ID=Msa1360890-mRNA-1:exon:12129;Parent=Msa1360890-mRNA-1
tig0017277 exon 6587 6695 6587 ID=Msa1360890-mRNA-1:exon:12130;Parent=Msa1360890-mRNA-1
tig0017277 exon 9858 10067 9858 ID=Msa1360890-mRNA-1:exon:12131;Parent=Msa1360890-mRNA-1
tig0017277 exon 10161 10227 10161 ID=Msa1360890-mRNA-1:exon:12132;Parent=Msa1360890-mRNA-1
tig0017277 exon 11599 12096 11599 ID=Msa1360890-mRNA-1:exon:12133;Parent=Msa1360890-mRNA-1
tig0017277 CDS 246 367 246 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 667 709 667 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 863 961 863 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 1321 1390 1321 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 1874 1968 1874 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 2073 2106 2073 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 2208 2292 2208 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 2551 2628 2551 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 5227 5274 5227 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 6290 6322 6290 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 6587 6695 6587 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 9858 10067 9858 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 CDS 10161 10226 10161 ID=Msa1360890-mRNA-1:cds;Parent=Msa1360890-mRNA-1
tig0017277 three_prime_UTR 10227 10227 10227 ID=Msa1360890-mRNA-1:three_prime_utr;Parent=Msa1360890-mRNA-1
tig0017277 three_prime_UTR 11599 12096 11599 ID=Msa1360890-mRNA-1:three_prime_utr;Parent=Msa1360890-mRNA-1
Gene Sequence

>Msa1360890

TTCAATATTGAATGGCAGGAAATAATAAGACATCATAGAGACAAGGTCAACCAGTCGATTAACCAATACACTGTTAAGTCAATACTGTGGCAGTTGCTGAATGGACTGAACTATCTGCACAGTAATTGGATAGTACATCGAGATTTGAAGCCATCAAATATATTGGTTATGGGCGATGGTGAGGAACACGGAGTTGTTAAAGTTGCTGACTTTGGGCTTGCAAGGATATATCTAGCCCCTCTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATTTGGTACCGTGCTCCGGAGTTGCTTCTTGGAGCTAAACATTATACCAGCGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCACTATTTCAAGGTGCAGAAGTTAAAGCTACACCAAATCCTTTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGTCATCCCACATTAGAAAAGTGGCCTTCCTTAGCACATCTTCCCCACTGGAACCAAGATACTTCACATATACAAGGACACAAATATGACAATGCTAGTCTCAATAGTGTTGTGCACCTATCTCCAAAAAGTCCTGCATATGACCTTTTGTCAAAGATGCTCGAATATGATCCGAAAAGGCGTATAACAGCAGCACAAGCTATGGAGCATGAGTATTTCAAAATGGAACCACAGCCTGGACGGAATGCACTTGTACCATGCCAACCTGGAGAGGCTTTTGTGAATTATCCCACACGTCCGGTGGACACAACCACAGATTTTGAAGGGACAACCAACATGCAGCAATCACAGCCGGTTTCGTCTGGAGCTGCTATTGCTGGAAACATGCCTGGTGGTCATGCGTCAAATAGATCTGTCCCTCGACCAATTAATGTTGGCATGCAAAGAATGCATCAGCTGCAAACTTATAATCTCACATCCCAGGCAGGGATGAGCAGTGGAATTAATCCTGCTGGCATCCCAATGCAACGAGGTGTTCCACAACAGGCCCATCAGCAGCAACAGTTGAGGAGAAAAGACCCAATGGGAATGCCAGGATATCCTCCACAGCAGAAATCAAGACGTATGTAA
Protein sequence

>Msa1360890

FNIEWQEIIRHHRDKVNQSINQYTVKSILWQLLNGLNYLHSNWIVHRDLKPSNILVMGDGEEHGVVKVADFGLARIYLAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLAHLPHWNQDTSHIQGHKYDNASLNSVVHLSPKSPAYDLLSKMLEYDPKRRITAAQAMEHEYFKMEPQPGRNALVPCQPGEAFVNYPTRPVDTTTDFEGTTNMQQSQPVSSGAAIAGNMPGGHASNRSVPRPINVGMQRMHQLQTYNLTSQAGMSSGINPAGIPMQRGVPQQAHQQQQLRRKDPMGMPGYPPQQKSRRM*