AlfalfaGEDB | Msa0577620

M. sativa cultivar zhongmu-4 / Msa0577620

KEGG: -
GO: GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007275 GO:0007389 GO:0008134 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009648 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009909 GO:0009910 GO:0010022 GO:0010048 GO:0010073 GO:0010093 GO:0010219 GO:0010221 GO:0010228 GO:0010468 GO:0010556 GO:0010582 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046983 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048507 GO:0048509 GO:0048519 GO:0048573 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048587 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080134 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0577620	PON45296.1	70.149	67	19	1	1	66	1	67	1.33e-23	94.7

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0577620	sp\|Q8VWM8\|M17_MAIZE	68.421	57	18	0	1	57	1	57	1.96e-21	86.7

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0577620	A0A2P5B948	70.149	67	19	1	1	66	1	67	6.36e-24	94.7

TFs/TRs:

Gene ID	Type	Classification
Msa0577620	TF	MADS-M-type

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0075310	Msa0577620	0.800528	1.381637e-48	-8.615850e-47
Msa0191040	Msa0577620	0.816328	5.853044e-52	-8.615850e-47
Msa0233340	Msa0577620	0.816040	6.789007e-52	-8.615850e-47
Msa0423360	Msa0577620	-0.813882	2.043796e-51	-8.615850e-47
Msa0248980	Msa0577620	0.800230	1.589052e-48	-8.615850e-47
Msa0269360	Msa0577620	0.803263	3.790308e-49	-8.615850e-47
Msa0304740	Msa0577620	0.801002	1.105765e-48	-8.615850e-47
Msa0311690	Msa0577620	0.804993	1.654480e-49	-8.615850e-47
Msa0311860	Msa0577620	0.806410	8.337627e-50	-8.615850e-47
Msa0331590	Msa0577620	0.804453	2.144749e-49	-8.615850e-47
Msa0511720	Msa0577620	-0.802446	5.587686e-49	-8.615850e-47
Msa0516320	Msa0577620	0.811899	5.558947e-51	-8.615850e-47
Msa0577620	Msa0577630	0.890670	7.989556e-74	-8.615850e-47
Msa0577620	Msa0577720	0.856609	2.865975e-62	-8.615850e-47
Msa0577620	Msa0621890	0.817379	3.400684e-52	-8.615850e-47
Msa0577620	Msa0631120	0.803482	3.413953e-49	-8.615850e-47
Msa0577620	Msa0638320	0.809851	1.542684e-50	-8.615850e-47
Msa0577620	Msa0653020	0.803997	2.668926e-49	-8.615850e-47
Msa0577620	Msa0677270	0.823894	1.083335e-53	-8.615850e-47
Msa0577620	Msa0677400	0.808046	3.753167e-50	-8.615850e-47
Msa0577620	Msa0695410	0.811842	5.719681e-51	-8.615850e-47
Msa0577620	Msa0697140	0.812448	4.217648e-51	-8.615850e-47
Msa0577620	Msa0791070	0.802606	5.180633e-49	-8.615850e-47
Msa0577620	Msa0810020	0.814740	1.320753e-51	-8.615850e-47
Msa0577620	Msa0946120	0.801558	8.506796e-49	-8.615850e-47
Msa0577620	Msa0951710	0.818279	2.129943e-52	-8.615850e-47
Msa0577620	Msa0951720	0.802158	6.407610e-49	-8.615850e-47
Msa0577620	Msa1009000	0.810070	1.384051e-50	-8.615850e-47
Msa0577620	Msa1098560	0.818400	1.999412e-52	-8.615850e-47
Msa0577620	Msa1111110	0.800158	1.643084e-48	-8.615850e-47
Msa0577620	Msa1220230	0.813946	1.978687e-51	-8.615850e-47
Msa0577620	Msa1221560	0.825476	4.591033e-54	-8.615850e-47
Msa0577620	Msa1265960	0.812840	3.461841e-51	-8.615850e-47
Msa0577620	Msa1297090	0.816226	6.168219e-52	-8.615850e-47
Msa0577620	Msa1431000	0.814004	1.921296e-51	-8.615850e-47
Msa0577620	Msa1460890	0.822049	2.915696e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0577620	MtrunA17_Chr4g0020221	68.333	60	19	0	1	60	1	60	1.37e-24	92.0
Msa0577620	MtrunA17_Chr5g0412271	64.407	59	21	0	1	59	1	59	8.81e-23	86.7
Msa0577620	MtrunA17_Chr5g0412461	64.407	59	21	0	1	59	1	59	9.12e-23	86.7
Msa0577620	MtrunA17_Chr1g0173161	62.712	59	22	0	1	59	1	59	3.05e-22	81.3
Msa0577620	MtrunA17_Chr8g0377561	64.912	57	20	0	1	57	1	57	1.54e-21	80.1
Msa0577620	MtrunA17_Chr5g0427921	59.649	57	23	0	1	57	1	57	1.57e-21	79.0
Msa0577620	MtrunA17_Chr2g0308251	59.322	59	24	0	1	59	1	59	3.05e-21	79.0
Msa0577620	MtrunA17_Chr4g0061671	63.158	57	21	0	1	57	1	57	4.62e-21	81.3
Msa0577620	MtrunA17_Chr3g0077501	57.377	61	26	0	1	61	1	61	1.19e-20	80.9
Msa0577620	MtrunA17_Chr7g0246381	63.158	57	21	0	1	57	1	57	1.50e-20	76.6
Msa0577620	MtrunA17_Chr5g0427401	59.649	57	23	0	1	57	1	57	1.58e-20	80.5
Msa0577620	MtrunA17_Chr5g0411691	67.797	59	19	0	1	59	1	59	2.03e-20	80.5
Msa0577620	MtrunA17_Chr4g0061691	59.322	59	24	0	1	59	1	59	5.79e-20	79.3
Msa0577620	MtrunA17_Chr5g0404951	61.404	57	22	0	1	57	1	57	6.00e-20	79.3
Msa0577620	MtrunA17_Chr3g0122251	64.912	57	20	0	1	57	1	57	7.32e-20	79.3
Msa0577620	MtrunA17_Chr4g0044071	52.239	67	32	0	1	67	1	67	9.58e-20	75.9
Msa0577620	MtrunA17_Chr6g0455511	56.522	69	30	0	1	69	1	69	1.49e-19	78.6
Msa0577620	MtrunA17_Chr5g0425191	55.385	65	29	0	1	65	1	65	1.98e-19	74.7
Msa0577620	MtrunA17_Chr8g0380021	56.667	60	26	0	1	60	17	76	3.08e-19	77.8
Msa0577620	MtrunA17_Chr4g0052061	57.895	57	24	0	1	57	1	57	6.29e-19	75.1
Msa0577620	MtrunA17_Chr4g0057151	58.333	60	25	0	1	60	1	60	7.58e-19	75.9
Msa0577620	MtrunA17_Chr8g0351051	62.712	59	22	0	1	59	1	59	7.90e-19	76.6
Msa0577620	MtrunA17_Chr8g0366231	61.404	57	22	0	1	57	1	57	8.14e-19	76.6
Msa0577620	MtrunA17_Chr4g0049901	61.404	57	22	0	1	57	27	83	8.45e-19	76.3
Msa0577620	MtrunA17_Chr7g0246431	58.333	60	25	0	1	60	1	60	9.86e-19	75.9
Msa0577620	MtrunA17_Chr7g0220121	58.333	60	25	0	1	60	1	60	1.21e-18	76.3
Msa0577620	MtrunA17_Chr5g0420091	53.623	69	32	0	1	69	1	69	1.46e-18	75.5
Msa0577620	MtrunA17_Chr6g0474371	57.627	59	25	0	1	59	1	59	2.86e-18	74.3
Msa0577620	MtrunA17_Chr8g0376821	50.847	59	29	0	1	59	1	59	3.16e-18	73.9
Msa0577620	MtrunA17_Chr8g0351041	59.649	57	23	0	1	57	1	57	3.32e-18	73.2
Msa0577620	MtrunA17_Chr4g0074101	50.847	59	29	0	1	59	1	59	3.36e-18	73.9
Msa0577620	MtrunA17_Chr8g0351031	56.667	60	26	0	1	60	1	60	3.75e-18	74.3
Msa0577620	MtrunA17_Chr4g0052081	44.286	70	39	0	1	70	1	70	3.89e-18	73.6
Msa0577620	MtrunA17_Chr7g0220111	55.072	69	31	0	1	69	1	69	4.39e-18	74.7
Msa0577620	MtrunA17_Chr1g0164791	59.649	57	23	0	1	57	1	57	4.43e-18	74.3
Msa0577620	MtrunA17_Chr3g0134451	62.903	62	22	1	1	62	1	61	5.05e-18	75.5
Msa0577620	MtrunA17_Chr1g0204111	57.377	61	26	0	1	61	17	77	5.56e-18	74.3
Msa0577620	MtrunA17_Chr1g0169761	50.847	59	29	0	1	59	1	59	6.03e-18	73.2
Msa0577620	MtrunA17_Chr2g0279821	57.627	59	25	0	1	59	1	59	7.17e-18	73.9
Msa0577620	MtrunA17_Chr3g0125241	52.632	57	27	0	1	57	26	82	1.03e-17	72.8
Msa0577620	MtrunA17_Chr5g0420081	58.621	58	24	0	1	58	1	58	1.22e-17	73.2
Msa0577620	MtrunA17_Chr4g0018421	57.895	57	24	0	1	57	1	57	1.25e-17	72.8
Msa0577620	MtrunA17_Chr3g0142191	61.404	57	22	0	1	57	1	57	1.63e-17	72.8
Msa0577620	MtrunA17_Chr3g0097101	61.017	59	23	0	1	59	16	74	1.78e-17	73.2
Msa0577620	MtrunA17_Chr4g0049541	61.404	57	22	0	1	57	1	57	1.94e-17	72.4
Msa0577620	MtrunA17_Chr8g0379021	51.562	64	29	1	2	63	12	75	7.28e-17	70.1
Msa0577620	MtrunA17_Chr2g0333981	52.459	61	29	0	1	61	11	71	1.20e-16	69.7
Msa0577620	MtrunA17_Chr2g0284911	57.627	59	25	0	1	59	16	74	1.32e-16	70.9
Msa0577620	MtrunA17_Chr1g0175611	50.847	59	29	0	1	59	1	59	1.78e-16	68.9
Msa0577620	MtrunA17_Chr8g0356071	46.269	67	36	0	1	67	1	67	2.68e-16	68.6
Msa0577620	MtrunA17_Chr1g0159661	49.123	57	29	0	1	57	1	57	5.58e-16	67.8
Msa0577620	MtrunA17_Chr1g0166611	62.222	45	17	0	15	59	19	63	7.96e-16	66.6
Msa0577620	MtrunA17_Chr5g0417661	52.830	53	25	0	1	53	56	108	1.84e-15	65.5
Msa0577620	MtrunA17_Chr2g0325971	51.724	58	28	0	2	59	9	66	3.05e-15	67.0
Msa0577620	MtrunA17_Chr1g0180591	45.763	59	32	0	1	59	1	59	3.26e-15	65.9
Msa0577620	MtrunA17_Chr3g0099421	53.448	58	27	0	2	59	34	91	4.65e-15	66.6
Msa0577620	MtrunA17_Chr1g0208561	51.724	58	28	0	2	59	9	66	6.82e-15	65.9
Msa0577620	MtrunA17_Chr3g0119901	49.180	61	31	0	1	61	8	68	7.41e-15	65.5
Msa0577620	MtrunA17_Chr2g0292791	53.448	58	27	0	2	59	9	66	8.98e-15	65.9
Msa0577620	MtrunA17_Chr3g0089141	51.724	58	28	0	2	59	9	66	9.93e-15	65.5
Msa0577620	MtrunA17_Chr8g0357771	49.153	59	30	0	1	59	1	59	1.25e-14	64.3
Msa0577620	MtrunA17_Chr1g0175601	47.458	59	31	0	1	59	1	59	1.41e-14	64.3
Msa0577620	MtrunA17_Chr1g0188671	48.333	60	31	0	2	61	47	106	1.62e-14	65.5
Msa0577620	MtrunA17_Chr5g0422421	50.000	60	30	0	2	61	9	68	2.24e-14	64.7
Msa0577620	MtrunA17_Chr4g0018951	69.048	42	13	0	16	57	26	67	2.88e-14	63.2
Msa0577620	MtrunA17_Chr1g0206991	50.000	60	30	0	2	61	9	68	3.06e-14	63.5
Msa0577620	MtrunA17_Chr1g0187361	48.333	60	31	0	2	61	9	68	3.43e-14	64.3
Msa0577620	MtrunA17_Chr1g0208581	51.724	58	28	0	2	59	9	66	3.74e-14	63.9
Msa0577620	MtrunA17_Chr2g0300421	48.333	60	31	0	2	61	9	68	4.45e-14	62.8
Msa0577620	MtrunA17_Chr1g0206721	51.724	58	28	0	2	59	9	66	4.84e-14	63.9
Msa0577620	MtrunA17_Chr3g0099411	51.724	58	28	0	2	59	9	66	6.88e-14	63.2
Msa0577620	MtrunA17_Chr8g0355091	53.571	56	26	0	2	57	9	64	9.20e-14	63.2
Msa0577620	MtrunA17_Chr4g0060841	52.830	53	25	0	1	53	1	53	9.24e-14	63.9
Msa0577620	MtrunA17_Chr4g0071601	55.385	65	29	0	1	65	11	75	1.57e-13	61.6
Msa0577620	MtrunA17_Chr1g0206701	53.571	56	26	0	2	57	9	64	1.75e-13	62.4
Msa0577620	MtrunA17_Chr5g0419601	49.153	59	30	0	1	59	8	66	2.22e-13	62.0
Msa0577620	MtrunA17_Chr2g0317481	50.000	56	28	0	2	57	9	64	2.44e-13	62.0
Msa0577620	MtrunA17_Chr2g0317451	50.000	56	28	0	2	57	9	64	2.44e-13	62.0
Msa0577620	MtrunA17_Chr5g0422941	50.000	56	28	0	2	57	9	64	2.76e-13	61.6
Msa0577620	MtrunA17_Chr2g0300441	50.000	58	29	0	2	59	9	66	3.19e-13	61.6
Msa0577620	MtrunA17_Chr3g0085241	50.847	59	29	0	1	59	40	98	3.25e-13	61.6
Msa0577620	MtrunA17_Chr1g0149391	51.786	56	27	0	2	57	9	64	3.72e-13	61.2
Msa0577620	MtrunA17_Chr3g0089151	46.667	60	32	0	2	61	9	68	9.63e-13	58.5
Msa0577620	MtrunA17_Chr3g0111841	50.000	50	25	0	8	57	2	51	2.96e-11	53.1

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0577620	AT4G37940.3	68.421	57	18	1	57	1	57	4.58e-23	86.3
Msa0577620	AT5G10140.2	63.934	61	22	1	61	1	61	2.03e-22	84.7
Msa0577620	AT5G10140.3	63.934	61	22	1	61	1	61	2.17e-22	85.1
Msa0577620	AT5G10140.1	61.905	63	24	1	63	1	63	2.19e-22	85.1
Msa0577620	AT5G10140.4	61.905	63	24	1	63	1	63	2.21e-22	84.7
Msa0577620	AT5G13790.1	64.407	59	21	1	59	1	59	3.50e-22	86.3
Msa0577620	AT5G13790.2	64.407	59	21	1	59	1	59	3.87e-22	86.3
Msa0577620	AT3G57390.3	62.712	59	22	1	59	1	59	5.49e-22	84.7
Msa0577620	AT3G57390.1	62.712	59	22	1	59	1	59	9.56e-22	84.7
Msa0577620	AT5G65070.4	54.688	64	29	1	64	1	64	1.83e-21	81.6
Msa0577620	AT5G65060.3	56.522	69	30	1	69	1	69	3.03e-21	82.0
Msa0577620	AT3G57230.2	59.322	59	24	1	59	1	59	3.10e-21	80.9
Msa0577620	AT2G22630.1	66.667	57	19	1	57	1	57	3.43e-21	82.8
Msa0577620	AT2G22630.2	66.667	57	19	1	57	1	57	3.43e-21	82.8
Msa0577620	AT5G65060.2	56.522	69	30	1	69	1	69	3.93e-21	81.6
Msa0577620	AT5G65070.3	58.065	62	26	1	62	1	62	4.04e-21	82.8
Msa0577620	AT2G03710.3	64.912	57	20	1	57	1	57	4.88e-21	81.6
Msa0577620	AT5G23260.3	64.912	57	20	1	57	1	57	4.88e-21	82.8
Msa0577620	AT5G65060.1	56.522	69	30	1	69	1	69	5.40e-21	81.6
Msa0577620	AT5G65070.1	54.688	64	29	1	64	1	64	6.17e-21	81.6
Msa0577620	AT5G65070.5	54.688	64	29	1	64	1	64	6.54e-21	81.6
Msa0577620	AT5G62165.14	57.377	61	26	1	61	1	61	8.57e-21	79.0
Msa0577620	AT3G61120.1	64.407	59	21	1	59	1	59	8.98e-21	82.0
Msa0577620	AT3G02310.2	64.912	57	20	1	57	1	57	1.04e-20	80.9
Msa0577620	AT5G65070.2	54.688	64	29	1	64	1	64	1.36e-20	81.3
Msa0577620	AT5G23260.2	64.912	57	20	1	57	1	57	1.54e-20	81.6
Msa0577620	AT5G65050.2	55.072	69	31	1	69	1	69	1.54e-20	80.1
Msa0577620	AT3G57230.1	61.404	57	22	1	57	1	57	1.55e-20	81.3
Msa0577620	AT3G57230.4	61.404	57	22	1	57	1	57	1.55e-20	81.3
Msa0577620	AT5G62165.6	57.377	61	26	1	61	1	61	1.70e-20	79.3
Msa0577620	AT5G62165.9	57.377	61	26	1	61	1	61	1.70e-20	79.3
Msa0577620	AT5G62165.7	57.377	61	26	1	61	1	61	1.70e-20	79.3
Msa0577620	AT5G62165.8	57.377	61	26	1	61	1	61	1.70e-20	79.3
Msa0577620	AT5G62165.13	57.377	61	26	1	61	1	61	1.70e-20	79.3
Msa0577620	AT5G62165.17	57.377	61	26	1	61	1	61	2.39e-20	79.0
Msa0577620	AT5G62165.12	57.377	61	26	1	61	1	61	2.39e-20	79.0
Msa0577620	AT5G62165.11	57.377	61	26	1	61	1	61	2.39e-20	79.0
Msa0577620	AT2G22540.3	61.404	57	22	1	57	1	57	2.42e-20	80.9
Msa0577620	AT2G22540.1	61.404	57	22	1	57	1	57	2.42e-20	80.9
Msa0577620	AT5G65050.5	55.072	69	31	1	69	1	69	3.07e-20	79.3
Msa0577620	AT4G37940.4	68.421	57	18	1	57	1	57	3.18e-20	80.1
Msa0577620	AT5G65050.1	55.072	69	31	1	69	1	69	3.39e-20	79.3
Msa0577620	AT5G65050.3	55.072	69	31	1	69	1	69	4.05e-20	79.3
Msa0577620	AT5G23260.1	64.912	57	20	1	57	17	73	4.25e-20	80.5
Msa0577620	AT2G45650.1	64.912	57	20	1	57	1	57	4.86e-20	80.1
Msa0577620	AT5G23260.4	64.912	57	20	1	57	17	73	5.06e-20	80.5
Msa0577620	AT4G37940.1	68.421	57	18	1	57	1	57	5.10e-20	79.7
Msa0577620	AT1G24260.3	64.912	57	20	1	57	1	57	5.22e-20	79.7
Msa0577620	AT3G02310.1	64.912	57	20	1	57	1	57	8.97e-20	79.3
Msa0577620	AT5G62165.10	57.377	61	26	1	61	1	61	9.76e-20	78.2
Msa0577620	AT5G62165.4	57.377	61	26	1	61	1	61	9.76e-20	78.2
Msa0577620	AT4G11880.2	53.623	69	32	1	69	1	69	1.25e-19	77.8
Msa0577620	AT4G11880.3	53.623	69	32	1	69	1	69	1.25e-19	77.8
Msa0577620	AT5G62165.3	57.377	61	26	1	61	1	61	1.26e-19	78.6
Msa0577620	AT5G62165.1	57.377	61	26	1	61	1	61	1.26e-19	78.6
Msa0577620	AT5G62165.2	57.377	61	26	1	61	1	61	1.26e-19	78.6
Msa0577620	AT5G15800.2	56.522	69	30	1	69	1	69	1.30e-19	79.3
Msa0577620	AT5G65080.2	57.143	63	27	1	63	8	70	1.31e-19	78.2
Msa0577620	AT1G24260.1	64.912	57	20	1	57	1	57	1.40e-19	79.0
Msa0577620	AT1G24260.2	64.912	57	20	1	57	1	57	1.42e-19	79.0
Msa0577620	AT5G60910.1	60.345	58	23	1	58	1	58	1.51e-19	79.0
Msa0577620	AT5G15800.1	56.522	69	30	1	69	1	69	1.54e-19	79.0
Msa0577620	AT2G14210.1	57.895	57	24	1	57	1	57	1.68e-19	78.6
Msa0577620	AT2G14210.2	57.895	57	24	1	57	1	57	1.98e-19	78.2
Msa0577620	AT4G24540.1	58.333	60	25	1	60	1	60	2.48e-19	77.8
Msa0577620	AT4G11880.4	53.623	69	32	1	69	1	69	2.84e-19	77.8
Msa0577620	AT4G11880.1	53.623	69	32	1	69	1	69	2.84e-19	77.8
Msa0577620	AT2G34440.1	56.140	57	25	1	57	1	57	3.02e-19	76.6
Msa0577620	AT5G20240.2	57.895	57	24	1	57	1	57	5.02e-19	75.5
Msa0577620	AT5G51860.2	59.016	61	25	1	61	1	61	6.19e-19	76.3
Msa0577620	AT5G51860.1	59.016	61	25	1	61	1	61	6.28e-19	76.6
Msa0577620	AT2G03710.2	64.912	57	20	1	57	1	57	7.39e-19	77.4
Msa0577620	AT2G22540.2	57.895	57	24	1	57	1	57	7.58e-19	76.6
Msa0577620	AT2G03710.1	64.912	57	20	1	57	1	57	7.98e-19	77.0
Msa0577620	AT1G26310.1	61.017	59	23	1	59	1	59	8.68e-19	77.0
Msa0577620	AT5G20240.1	57.895	57	24	1	57	1	57	1.28e-18	75.9
Msa0577620	AT2G45660.2	57.377	61	26	1	61	1	61	1.99e-18	73.9
Msa0577620	AT1G22130.1	55.556	63	28	1	63	1	63	2.10e-18	77.0
Msa0577620	AT3G30260.1	53.623	69	32	1	69	1	69	2.26e-18	75.9
Msa0577620	AT5G65080.3	53.125	64	30	1	64	8	71	2.37e-18	74.7
Msa0577620	AT5G51870.2	56.667	60	26	1	60	1	60	2.39e-18	74.3
Msa0577620	AT4G22950.2	60.000	60	24	1	60	1	60	3.26e-18	73.9
Msa0577620	AT1G69120.1	62.069	58	22	1	58	1	58	3.51e-18	75.5
Msa0577620	AT5G51870.5	56.667	60	26	1	60	24	83	3.84e-18	74.3
Msa0577620	AT1G69120.2	62.069	58	22	1	58	1	58	4.13e-18	74.7
Msa0577620	AT2G45660.1	57.377	61	26	1	61	1	61	5.79e-18	73.9
Msa0577620	AT5G51870.1	56.667	60	26	1	60	1	60	6.09e-18	73.9
Msa0577620	AT5G51870.4	56.667	60	26	1	60	1	60	7.53e-18	73.9
Msa0577620	AT4G22950.3	60.000	60	24	1	60	1	60	8.28e-18	73.9
Msa0577620	AT4G22950.1	60.000	60	24	1	60	1	60	8.28e-18	73.9
Msa0577620	AT1G77980.1	55.556	63	28	1	63	1	63	9.00e-18	75.1
Msa0577620	AT3G58780.3	55.385	65	29	1	65	16	80	9.16e-18	74.7
Msa0577620	AT5G51870.3	57.627	59	25	1	59	11	69	1.05e-17	73.6
Msa0577620	AT3G58780.4	59.322	59	24	1	59	16	74	1.29e-17	74.3
Msa0577620	AT3G58780.2	54.412	68	31	1	68	16	83	1.58e-17	73.6
Msa0577620	AT1G71692.1	57.895	57	24	1	57	1	57	1.61e-17	72.8
Msa0577620	AT1G77080.11	55.072	69	31	1	69	1	69	1.91e-17	72.0
Msa0577620	AT1G77080.5	55.072	69	31	1	69	1	69	2.07e-17	72.0
Msa0577620	AT3G58780.5	59.322	59	24	1	59	22	80	2.32e-17	73.2
Msa0577620	AT4G18960.1	58.621	58	24	2	59	18	75	2.73e-17	73.2
Msa0577620	AT3G58780.1	59.322	59	24	1	59	16	74	2.88e-17	72.8
Msa0577620	AT4G09960.5	57.377	61	26	1	61	11	71	3.29e-17	72.8
Msa0577620	AT4G09960.2	57.377	61	26	1	61	1	61	3.70e-17	72.0
Msa0577620	AT1G77080.4	55.072	69	31	1	69	1	69	3.88e-17	71.6
Msa0577620	AT4G09960.1	57.377	61	26	1	61	1	61	4.58e-17	72.0
Msa0577620	AT4G09960.6	57.377	61	26	1	61	2	62	4.65e-17	72.0
Msa0577620	AT3G66656.1	54.386	57	26	1	57	1	57	4.89e-17	70.9
Msa0577620	AT1G77080.8	55.072	69	31	1	69	1	69	6.71e-17	71.6
Msa0577620	AT1G77080.12	55.556	63	28	1	63	1	63	7.73e-17	69.7
Msa0577620	AT2G42830.1	59.322	59	24	1	59	16	74	8.15e-17	71.6
Msa0577620	AT4G37435.1	51.613	62	30	1	62	1	62	8.83e-17	70.5
Msa0577620	AT4G09960.3	57.377	61	26	1	61	27	87	9.12e-17	71.6
Msa0577620	AT2G42830.2	59.322	59	24	1	59	16	74	9.98e-17	71.6
Msa0577620	AT4G09960.4	57.377	61	26	1	61	96	156	1.22e-16	72.0
Msa0577620	AT1G77080.2	55.556	63	28	1	63	1	63	1.68e-16	69.7
Msa0577620	AT1G31140.1	59.649	57	23	1	57	1	57	2.05e-16	70.1
Msa0577620	AT3G54340.1	56.140	57	25	1	57	1	57	2.67e-16	70.1
Msa0577620	AT1G77950.3	52.381	63	30	1	63	1	63	2.78e-15	67.8
Msa0577620	AT1G77950.2	52.381	63	30	1	63	1	63	2.78e-15	67.8
Msa0577620	AT1G77950.1	52.381	63	30	1	63	1	63	2.78e-15	67.8
Msa0577620	AT1G77950.4	52.381	63	30	1	63	1	63	2.78e-15	67.8
Msa0577620	AT1G72350.1	51.724	58	28	2	59	43	100	3.07e-15	67.0
Msa0577620	AT1G31140.2	59.649	57	23	1	57	1	57	4.04e-15	66.6
Msa0577620	AT2G03060.3	54.717	53	24	1	53	1	53	6.70e-15	67.4
Msa0577620	AT2G03060.7	54.717	53	24	1	53	1	53	6.70e-15	67.4
Msa0577620	AT2G03060.1	54.717	53	24	1	53	1	53	6.70e-15	67.4
Msa0577620	AT1G65360.1	47.541	61	32	1	61	6	66	8.18e-15	66.2
Msa0577620	AT1G18750.1	48.276	58	30	1	58	1	58	8.69e-15	67.0
Msa0577620	AT1G18750.3	48.276	58	30	1	58	1	58	9.68e-15	67.0
Msa0577620	AT1G18750.4	48.276	58	30	1	58	1	58	1.06e-14	67.0
Msa0577620	AT2G03060.2	54.717	53	24	1	53	1	53	1.09e-14	67.0
Msa0577620	AT1G69540.2	52.830	53	25	1	53	1	53	1.29e-13	63.9
Msa0577620	AT1G47760.1	47.368	57	30	1	57	1	57	1.72e-13	62.0
Msa0577620	AT1G69540.1	52.830	53	25	1	53	1	53	1.96e-13	63.2
Msa0577620	AT1G01530.1	44.068	59	33	1	59	6	64	5.64e-13	61.2
Msa0577620	AT4G36590.1	51.786	56	27	2	57	7	62	7.35e-13	61.2
Msa0577620	AT2G24840.1	47.458	59	31	1	59	62	120	1.75e-12	60.1
Msa0577620	AT3G04100.1	43.103	58	33	2	59	14	71	2.78e-12	58.9
Msa0577620	AT5G60440.1	48.276	58	30	2	59	7	64	3.00e-12	59.7
Msa0577620	AT2G26320.1	48.387	62	32	1	62	17	78	4.59e-12	56.6
Msa0577620	AT1G28460.1	48.214	56	29	2	57	8	63	3.05e-11	55.8

Find 13 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCTTTGCGATGTCAAGGT+AGG	0.490456	4_1:+81962418	Msa0577620:CDS
AAGAAGAATGGGGAAGAAGA+AGG	0.491399	4_1:+81962303	None:intergenic
CTGGTCATGTTCTCTAACAC+TGG	0.496426	4_1:+81962442	Msa0577620:CDS
TTGCGATGTCAAGGTAGGGC+TGG	0.527986	4_1:+81962423	Msa0577620:CDS
TTCTTTGCGATGTCAAGGTA+GGG	0.532813	4_1:+81962419	Msa0577620:CDS
AAGAATGGGGAAGAAGAAGG+TGG	0.540786	4_1:+81962306	None:intergenic
TTGAGTTCAACAATGGTGAC+AGG	0.546338	4_1:+81962473	Msa0577620:CDS
GGCCGTTCTTTGCGATGTCA+AGG	0.552742	4_1:+81962414	Msa0577620:CDS
TCATATAATTTATAGTCGAT+CGG	0.580724	4_1:-81963860	None:intergenic
GATCAAGAAAGCTAGTGAGT+TGG	0.593348	4_1:+81962393	Msa0577620:CDS
TACCTTGACATCGCAAAGAA+CGG	0.595940	4_1:-81962416	None:intergenic
AAGCTCTTTGAGTTCAACAA+TGG	0.627407	4_1:+81962466	Msa0577620:CDS
GGTGGAGATAAAGCTAATCG+AGG	0.697177	4_1:+81962324	Msa0577620:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGATAATCATTTATTATTA+AGG	+	chr4_1:81962632-81962651	Msa0577620:intron	10.0%
!!	TGATAATCATTTATTATTAA+GGG	+	chr4_1:81962633-81962652	Msa0577620:intron	10.0%
!!!	GTATTTTATTTTGTTTATAT+CGG	+	chr4_1:81962893-81962912	Msa0577620:intron	10.0%
!!!	TATTTTATTTTGTTTATATC+GGG	+	chr4_1:81962894-81962913	Msa0577620:intron	10.0%
!!!	TTATTTTTCATATACATATT+AGG	-	chr4_1:81963566-81963585	None:intergenic	10.0%
!!	AATCATTCAAATTATTAATA+AGG	-	chr4_1:81963783-81963802	None:intergenic	10.0%
!!	ATGATAATCATTTATTATTA+AGG	+	chr4_1:81962632-81962651	Msa0577620:intron	10.0%
!!	TGATAATCATTTATTATTAA+GGG	+	chr4_1:81962633-81962652	Msa0577620:intron	10.0%
!!!	GTATTTTATTTTGTTTATAT+CGG	+	chr4_1:81962893-81962912	Msa0577620:intron	10.0%
!!!	TATTTTATTTTGTTTATATC+GGG	+	chr4_1:81962894-81962913	Msa0577620:intron	10.0%
!!!	TTATTTTTCATATACATATT+AGG	-	chr4_1:81963566-81963585	None:intergenic	10.0%
!!	AATCATTCAAATTATTAATA+AGG	-	chr4_1:81963783-81963802	None:intergenic	10.0%
!!	GATAATCATTTATTATTAAG+GGG	+	chr4_1:81962634-81962653	Msa0577620:intron	15.0%
!!!	TTTGAAATATGATTAGAAAA+TGG	-	chr4_1:81963387-81963406	None:intergenic	15.0%
!!	TATTTCATTTCAAATACATA+TGG	+	chr4_1:81963752-81963771	Msa0577620:intron	15.0%
!!	GATAATCATTTATTATTAAG+GGG	+	chr4_1:81962634-81962653	Msa0577620:intron	15.0%
!!!	TTTGAAATATGATTAGAAAA+TGG	-	chr4_1:81963387-81963406	None:intergenic	15.0%
!!	TATTTCATTTCAAATACATA+TGG	+	chr4_1:81963752-81963771	Msa0577620:intron	15.0%
!!!	TTTTATGACTTTTTTTTTGC+TGG	+	chr4_1:81962607-81962626	Msa0577620:intron	20.0%
!!	AAATCAATCTGTTTATAAGT+AGG	+	chr4_1:81963474-81963493	Msa0577620:intron	20.0%
!!	CATTCAAATTATTAATAAGG+TGG	-	chr4_1:81963780-81963799	None:intergenic	20.0%
!!!	TTTTATGACTTTTTTTTTGC+TGG	+	chr4_1:81962607-81962626	Msa0577620:intron	20.0%
!!	AAATCAATCTGTTTATAAGT+AGG	+	chr4_1:81963474-81963493	Msa0577620:intron	20.0%
!!	CATTCAAATTATTAATAAGG+TGG	-	chr4_1:81963780-81963799	None:intergenic	20.0%
!	AGTCATAAAAACGAAATTAG+TGG	-	chr4_1:81962597-81962616	None:intergenic	25.0%
!	AGCATATATCAATCAATACT+AGG	-	chr4_1:81962688-81962707	None:intergenic	25.0%
!!!	AATGATCAGTAAAAAGTGTT+TGG	-	chr4_1:81962829-81962848	None:intergenic	25.0%
!	CTTTGTAGGATTTAAATTAG+TGG	+	chr4_1:81962955-81962974	Msa0577620:intron	25.0%
!!	ACGTTTAAAACTGTTAAGAA+GGG	-	chr4_1:81962987-81963006	None:intergenic	25.0%
!!	AACGTTTAAAACTGTTAAGA+AGG	-	chr4_1:81962988-81963007	None:intergenic	25.0%
!	TCTTAGTTCGAATCTAATAT+TGG	-	chr4_1:81963020-81963039	None:intergenic	25.0%
!!!	AAATGGATTTTTCTTGTGAT+GGG	-	chr4_1:81963370-81963389	None:intergenic	25.0%
!!!	AAAATGGATTTTTCTTGTGA+TGG	-	chr4_1:81963371-81963390	None:intergenic	25.0%
!!!	TTTTAGGTTTACATGAATTC+AGG	-	chr4_1:81963513-81963532	None:intergenic	25.0%
!!!	ACTTAGAAATTTGTTGATGA+AGG	-	chr4_1:81963687-81963706	None:intergenic	25.0%
!	AAATTTCTAAGTGTTTGATC+TGG	+	chr4_1:81963695-81963714	Msa0577620:intron	25.0%
!!!	TTGATCTGGTTTTATGATTA+TGG	+	chr4_1:81963709-81963728	Msa0577620:intron	25.0%
!!	AATAATTTGAATGATTTGCG+TGG	+	chr4_1:81963787-81963806	Msa0577620:intron	25.0%
!	AGTCATAAAAACGAAATTAG+TGG	-	chr4_1:81962597-81962616	None:intergenic	25.0%
!	AGCATATATCAATCAATACT+AGG	-	chr4_1:81962688-81962707	None:intergenic	25.0%
!!!	AATGATCAGTAAAAAGTGTT+TGG	-	chr4_1:81962829-81962848	None:intergenic	25.0%
!	CTTTGTAGGATTTAAATTAG+TGG	+	chr4_1:81962955-81962974	Msa0577620:intron	25.0%
!!	ACGTTTAAAACTGTTAAGAA+GGG	-	chr4_1:81962987-81963006	None:intergenic	25.0%
!!	AACGTTTAAAACTGTTAAGA+AGG	-	chr4_1:81962988-81963007	None:intergenic	25.0%
!	TCTTAGTTCGAATCTAATAT+TGG	-	chr4_1:81963020-81963039	None:intergenic	25.0%
!!!	AAATGGATTTTTCTTGTGAT+GGG	-	chr4_1:81963370-81963389	None:intergenic	25.0%
!!!	AAAATGGATTTTTCTTGTGA+TGG	-	chr4_1:81963371-81963390	None:intergenic	25.0%
!!!	TTTTAGGTTTACATGAATTC+AGG	-	chr4_1:81963513-81963532	None:intergenic	25.0%
!!!	ACTTAGAAATTTGTTGATGA+AGG	-	chr4_1:81963687-81963706	None:intergenic	25.0%
!	AAATTTCTAAGTGTTTGATC+TGG	+	chr4_1:81963695-81963714	Msa0577620:intron	25.0%
!!!	TTGATCTGGTTTTATGATTA+TGG	+	chr4_1:81963709-81963728	Msa0577620:intron	25.0%
!!	AATAATTTGAATGATTTGCG+TGG	+	chr4_1:81963787-81963806	Msa0577620:intron	25.0%
	ACAAATCAAAGTACATGGAA+TGG	-	chr4_1:81962518-81962537	None:intergenic	30.0%
	TTCTCACAAATCAAAGTACA+TGG	-	chr4_1:81962523-81962542	None:intergenic	30.0%
!!	TTAGAGCCACTGATTTATAT+CGG	+	chr4_1:81962852-81962871	Msa0577620:intron	30.0%
	AAATACCCGATATAAATCAG+TGG	-	chr4_1:81962861-81962880	None:intergenic	30.0%
!	TTAGCTTTCACAATTATGCA+CGG	-	chr4_1:81962926-81962945	None:intergenic	30.0%
	AGTCTCTTATAGCTTATCTA+AGG	-	chr4_1:81963043-81963062	None:intergenic	30.0%
!	TTATTGGTTAGATAGTCTAG+TGG	+	chr4_1:81963194-81963213	Msa0577620:intron	30.0%
	TTAGATTCACACATTATGTG+TGG	+	chr4_1:81963217-81963236	Msa0577620:intron	30.0%
!!	TAGAAATTTGTTGATGAAGG+TGG	-	chr4_1:81963684-81963703	None:intergenic	30.0%
	ACAAATCAAAGTACATGGAA+TGG	-	chr4_1:81962518-81962537	None:intergenic	30.0%
	TTCTCACAAATCAAAGTACA+TGG	-	chr4_1:81962523-81962542	None:intergenic	30.0%
!!	TTAGAGCCACTGATTTATAT+CGG	+	chr4_1:81962852-81962871	Msa0577620:intron	30.0%
	AAATACCCGATATAAATCAG+TGG	-	chr4_1:81962861-81962880	None:intergenic	30.0%
!	TTAGCTTTCACAATTATGCA+CGG	-	chr4_1:81962926-81962945	None:intergenic	30.0%
	AGTCTCTTATAGCTTATCTA+AGG	-	chr4_1:81963043-81963062	None:intergenic	30.0%
!	TTATTGGTTAGATAGTCTAG+TGG	+	chr4_1:81963194-81963213	Msa0577620:intron	30.0%
	TTAGATTCACACATTATGTG+TGG	+	chr4_1:81963217-81963236	Msa0577620:intron	30.0%
!!	TAGAAATTTGTTGATGAAGG+TGG	-	chr4_1:81963684-81963703	None:intergenic	30.0%
	TAATCGAGGACAAAAACAGT+CGG	+	chr4_1:81962338-81962357	Msa0577620:CDS	35.0%
!	GGCAAGTAACATTTTCAAAG+AGG	+	chr4_1:81962359-81962378	Msa0577620:CDS	35.0%
!!	AACATTTTCAAAGAGGCGTA+AGG	+	chr4_1:81962366-81962385	Msa0577620:CDS	35.0%
!!	ACATTTTCAAAGAGGCGTAA+GGG	+	chr4_1:81962367-81962386	Msa0577620:CDS	35.0%
!	AAGCTCTTTGAGTTCAACAA+TGG	+	chr4_1:81962466-81962485	Msa0577620:CDS	35.0%
!!	TAGAGCCACTGATTTATATC+GGG	+	chr4_1:81962853-81962872	Msa0577620:intron	35.0%
	TTAAATCCTACAAAGCTCGA+AGG	-	chr4_1:81962950-81962969	None:intergenic	35.0%
	AGGGACATTAATTATGTGCA+GGG	-	chr4_1:81963277-81963296	None:intergenic	35.0%
	AAGGGACATTAATTATGTGC+AGG	-	chr4_1:81963278-81963297	None:intergenic	35.0%
!	AACGACACATGTCTCTTTTT+AGG	-	chr4_1:81963529-81963548	None:intergenic	35.0%
	TAATCGAGGACAAAAACAGT+CGG	+	chr4_1:81962338-81962357	Msa0577620:CDS	35.0%
!	GGCAAGTAACATTTTCAAAG+AGG	+	chr4_1:81962359-81962378	Msa0577620:CDS	35.0%
!!	AACATTTTCAAAGAGGCGTA+AGG	+	chr4_1:81962366-81962385	Msa0577620:CDS	35.0%
!!	ACATTTTCAAAGAGGCGTAA+GGG	+	chr4_1:81962367-81962386	Msa0577620:CDS	35.0%
!	AAGCTCTTTGAGTTCAACAA+TGG	+	chr4_1:81962466-81962485	Msa0577620:CDS	35.0%
!!	TAGAGCCACTGATTTATATC+GGG	+	chr4_1:81962853-81962872	Msa0577620:intron	35.0%
	TTAAATCCTACAAAGCTCGA+AGG	-	chr4_1:81962950-81962969	None:intergenic	35.0%
	AGGGACATTAATTATGTGCA+GGG	-	chr4_1:81963277-81963296	None:intergenic	35.0%
	AAGGGACATTAATTATGTGC+AGG	-	chr4_1:81963278-81963297	None:intergenic	35.0%
!	AACGACACATGTCTCTTTTT+AGG	-	chr4_1:81963529-81963548	None:intergenic	35.0%
	GATCAAGAAAGCTAGTGAGT+TGG	+	chr4_1:81962393-81962412	Msa0577620:CDS	40.0%
	TACCTTGACATCGCAAAGAA+CGG	-	chr4_1:81962419-81962438	None:intergenic	40.0%
	TTCTTTGCGATGTCAAGGTA+GGG	+	chr4_1:81962419-81962438	Msa0577620:CDS	40.0%
	TTGAGTTCAACAATGGTGAC+AGG	+	chr4_1:81962473-81962492	Msa0577620:CDS	40.0%
	TCTGTACACTCCAACTTCTT+TGG	+	chr4_1:81962550-81962569	Msa0577620:intron	40.0%
!	ACACTCCAACTTCTTTGGAA+CGG	+	chr4_1:81962555-81962574	Msa0577620:intron	40.0%
	CACACACACACATCTACATA+TGG	+	chr4_1:81962748-81962767	Msa0577620:intron	40.0%
	CACATTATGTGTGGAGAAGT+AGG	+	chr4_1:81963226-81963245	Msa0577620:intron	40.0%
	TGTGGAGAAGTAGGAAATCT+GGG	+	chr4_1:81963235-81963254	Msa0577620:intron	40.0%
	ATTAATTATGTGCAGGGACC+GGG	-	chr4_1:81963271-81963290	None:intergenic	40.0%
	CATTAATTATGTGCAGGGAC+CGG	-	chr4_1:81963272-81963291	None:intergenic	40.0%
	GATTTGCGTGGTGTATAACT+TGG	+	chr4_1:81963799-81963818	Msa0577620:intron	40.0%
	GATCAAGAAAGCTAGTGAGT+TGG	+	chr4_1:81962393-81962412	Msa0577620:CDS	40.0%
	TACCTTGACATCGCAAAGAA+CGG	-	chr4_1:81962419-81962438	None:intergenic	40.0%
	TTCTTTGCGATGTCAAGGTA+GGG	+	chr4_1:81962419-81962438	Msa0577620:CDS	40.0%
	TTGAGTTCAACAATGGTGAC+AGG	+	chr4_1:81962473-81962492	Msa0577620:CDS	40.0%
	TCTGTACACTCCAACTTCTT+TGG	+	chr4_1:81962550-81962569	Msa0577620:intron	40.0%
!	ACACTCCAACTTCTTTGGAA+CGG	+	chr4_1:81962555-81962574	Msa0577620:intron	40.0%
	CACACACACACATCTACATA+TGG	+	chr4_1:81962748-81962767	Msa0577620:intron	40.0%
	CACATTATGTGTGGAGAAGT+AGG	+	chr4_1:81963226-81963245	Msa0577620:intron	40.0%
	TGTGGAGAAGTAGGAAATCT+GGG	+	chr4_1:81963235-81963254	Msa0577620:intron	40.0%
	ATTAATTATGTGCAGGGACC+GGG	-	chr4_1:81963271-81963290	None:intergenic	40.0%
	CATTAATTATGTGCAGGGAC+CGG	-	chr4_1:81963272-81963291	None:intergenic	40.0%
	GATTTGCGTGGTGTATAACT+TGG	+	chr4_1:81963799-81963818	Msa0577620:intron	40.0%
	GGTGGAGATAAAGCTAATCG+AGG	+	chr4_1:81962324-81962343	Msa0577620:CDS	45.0%
	GTTCTTTGCGATGTCAAGGT+AGG	+	chr4_1:81962418-81962437	Msa0577620:CDS	45.0%
	CTGGTCATGTTCTCTAACAC+TGG	+	chr4_1:81962442-81962461	Msa0577620:CDS	45.0%
	TGTGACCGTTCCAAAGAAGT+TGG	-	chr4_1:81962563-81962582	None:intergenic	45.0%
!	GCTAATCCTTCGAGCTTTGT+AGG	+	chr4_1:81962941-81962960	Msa0577620:intron	45.0%
	GTGTGGAGAAGTAGGAAATC+TGG	+	chr4_1:81963234-81963253	Msa0577620:intron	45.0%
	GTGGAGAAGTAGGAAATCTG+GGG	+	chr4_1:81963236-81963255	Msa0577620:intron	45.0%
	TTAATTATGTGCAGGGACCG+GGG	-	chr4_1:81963270-81963289	None:intergenic	45.0%
	AGCTCAGTTGGCAGCTAAAA+GGG	-	chr4_1:81963296-81963315	None:intergenic	45.0%
	GTCTTGTACTTGAGCTCAGT+TGG	-	chr4_1:81963308-81963327	None:intergenic	45.0%
	TGCGTGGTGTATAACTTGGA+AGG	+	chr4_1:81963803-81963822	Msa0577620:intron	45.0%
	GGTGGAGATAAAGCTAATCG+AGG	+	chr4_1:81962324-81962343	Msa0577620:CDS	45.0%
	GTTCTTTGCGATGTCAAGGT+AGG	+	chr4_1:81962418-81962437	Msa0577620:CDS	45.0%
	CTGGTCATGTTCTCTAACAC+TGG	+	chr4_1:81962442-81962461	Msa0577620:CDS	45.0%
	TGTGACCGTTCCAAAGAAGT+TGG	-	chr4_1:81962563-81962582	None:intergenic	45.0%
!	GCTAATCCTTCGAGCTTTGT+AGG	+	chr4_1:81962941-81962960	Msa0577620:intron	45.0%
	GTGTGGAGAAGTAGGAAATC+TGG	+	chr4_1:81963234-81963253	Msa0577620:intron	45.0%
	GTGGAGAAGTAGGAAATCTG+GGG	+	chr4_1:81963236-81963255	Msa0577620:intron	45.0%
	TTAATTATGTGCAGGGACCG+GGG	-	chr4_1:81963270-81963289	None:intergenic	45.0%
	AGCTCAGTTGGCAGCTAAAA+GGG	-	chr4_1:81963296-81963315	None:intergenic	45.0%
	GTCTTGTACTTGAGCTCAGT+TGG	-	chr4_1:81963308-81963327	None:intergenic	45.0%
	TGCGTGGTGTATAACTTGGA+AGG	+	chr4_1:81963803-81963822	Msa0577620:intron	45.0%
!!	AAAAAAAAAATTAGATTTAT+TGG	+	chr4_1:81963178-81963197	Msa0577620:intron	5.0%
!!	AAAAAAAAAATTAGATTTAT+TGG	+	chr4_1:81963178-81963197	Msa0577620:intron	5.0%
	GCAACTACGTAAGCAGTGCT+AGG	-	chr4_1:81962715-81962734	None:intergenic	50.0%
!!	AATCTGGGGTTTTCGAACCC+CGG	+	chr4_1:81963250-81963269	Msa0577620:intron	50.0%
	GAGCTCAGTTGGCAGCTAAA+AGG	-	chr4_1:81963297-81963316	None:intergenic	50.0%
	TTGGAAGGCTGCTTGTGTTG+TGG	+	chr4_1:81963818-81963837	Msa0577620:intron	50.0%
	GCTGCTTGTGTTGTGGTGTA+GGG	+	chr4_1:81963825-81963844	Msa0577620:intron	50.0%
	GCAACTACGTAAGCAGTGCT+AGG	-	chr4_1:81962715-81962734	None:intergenic	50.0%
!!	AATCTGGGGTTTTCGAACCC+CGG	+	chr4_1:81963250-81963269	Msa0577620:intron	50.0%
	GAGCTCAGTTGGCAGCTAAA+AGG	-	chr4_1:81963297-81963316	None:intergenic	50.0%
	TTGGAAGGCTGCTTGTGTTG+TGG	+	chr4_1:81963818-81963837	Msa0577620:intron	50.0%
	GCTGCTTGTGTTGTGGTGTA+GGG	+	chr4_1:81963825-81963844	Msa0577620:intron	50.0%
	GGCCGTTCTTTGCGATGTCA+AGG	+	chr4_1:81962414-81962433	Msa0577620:CDS	55.0%
	TTGCGATGTCAAGGTAGGGC+TGG	+	chr4_1:81962423-81962442	Msa0577620:CDS	55.0%
	GGCTGCTTGTGTTGTGGTGT+AGG	+	chr4_1:81963824-81963843	Msa0577620:intron	55.0%
	GGCCGTTCTTTGCGATGTCA+AGG	+	chr4_1:81962414-81962433	Msa0577620:CDS	55.0%
	TTGCGATGTCAAGGTAGGGC+TGG	+	chr4_1:81962423-81962442	Msa0577620:CDS	55.0%
	GGCTGCTTGTGTTGTGGTGT+AGG	+	chr4_1:81963824-81963843	Msa0577620:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	81962310	81963873	81962310	ID=Msa0577620;Name=Msa0577620
chr4_1	mRNA	81962310	81963873	81962310	ID=Msa0577620-mRNA-1;Parent=Msa0577620;Name=Msa0577620-mRNA-1;_AED=0.51;_eAED=0.51;_QI=0\|0\|0\|0.5\|1\|1\|2\|0\|70
chr4_1	exon	81962310	81962494	81962310	ID=Msa0577620-mRNA-1:exon:29589;Parent=Msa0577620-mRNA-1
chr4_1	exon	81963846	81963873	81963846	ID=Msa0577620-mRNA-1:exon:29590;Parent=Msa0577620-mRNA-1
chr4_1	CDS	81962310	81962494	81962310	ID=Msa0577620-mRNA-1:cds;Parent=Msa0577620-mRNA-1
chr4_1	CDS	81963846	81963873	81963846	ID=Msa0577620-mRNA-1:cds;Parent=Msa0577620-mRNA-1

Gene Sequence	>Msa0577620 ATGGGGAAGAAGAAGGTGGAGATAAAGCTAATCGAGGACAAAAACAGTCGGCAAGTAACATTTTCAAAGAGGCGTAAGGGTTTGATCAAGAAAGCTAGTGAGTTGGCCGTTCTTTGCGATGTCAAGGTAGGGCTGGTCATGTTCTCTAACACTGGAAAGCTCTTTGAGTTCAACAATGGTGACAGGGTTTCATTGTCATCCGATCGACTATAA
Protein sequence	>Msa0577620 MGKKKVEIKLIEDKNSRQVTFSKRRKGLIKKASELAVLCDVKVGLVMFSNTGKLFEFNNGDRVSLSSDRL*