AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0621890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0621890 MtrunA17_Chr4g0071101 89.572 748 70 5 1 744 1 744 0.0 1337
Msa0621890 MtrunA17_Chr1g0187011 49.436 621 273 5 145 746 187 785 0.0 593
Msa0621890 MtrunA17_Chr6g0484411 46.284 592 297 5 140 729 188 760 7.51e-161 486
Msa0621890 MtrunA17_Chr6g0451621 43.924 576 283 5 169 729 146 696 4.32e-147 456
Msa0621890 MtrunA17_Chr8g0366041 87.783 221 26 1 185 404 1 221 1.10e-130 386
Msa0621890 MtrunA17_Chr8g0391141 42.230 547 269 7 168 710 100 603 1.27e-130 401
Msa0621890 MtrunA17_Chr2g0330811 41.497 588 309 12 179 742 171 747 1.34e-121 382
Msa0621890 MtrunA17_Chr8g0366051 92.632 95 7 0 465 559 3 97 9.07e-52 175
Msa0621890 MtrunA17_Chr4g0067911 40.127 157 81 4 578 731 185 331 5.12e-24 104
Msa0621890 MtrunA17_Chr4g0033621 37.569 181 102 4 544 724 135 304 3.50e-23 103
Msa0621890 MtrunA17_Chr1g0171521 39.568 139 74 4 565 697 130 264 2.58e-21 94.7
Msa0621890 MtrunA17_Chr8g0391361 35.374 147 89 2 552 695 5 148 1.78e-20 89.4
Msa0621890 MtrunA17_Chr6g0449261 28.780 205 139 3 531 731 89 290 2.41e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0621890 AT4G29750.2 52.893 726 276 10 52 731 83 788 0.0 712
Msa0621890 AT4G29750.1 52.893 726 276 10 52 731 83 788 0.0 711
Msa0621890 AT3G23070.1 47.333 600 286 7 162 746 209 793 2.84e-175 525
Msa0621890 AT4G14510.1 47.512 623 273 9 162 744 210 818 4.86e-175 525
Msa0621890 AT3G18390.1 45.918 588 291 7 153 729 221 792 3.46e-163 493
Msa0621890 AT3G01370.1 43.266 594 314 6 161 743 153 734 4.52e-150 464
Msa0621890 AT5G16180.1 37.688 597 311 7 143 734 177 717 9.53e-111 352
Msa0621890 AT5G16180.2 36.019 422 210 6 143 560 177 542 2.94e-61 216
Msa0621890 AT3G25440.2 36.022 186 108 4 565 742 85 267 2.77e-26 112
Msa0621890 AT3G25440.4 37.126 167 97 3 581 742 13 176 2.89e-26 110
Msa0621890 AT3G25440.3 37.126 167 97 3 581 742 13 176 2.89e-26 110
Msa0621890 AT3G25440.5 37.126 167 97 3 581 742 13 176 2.89e-26 110
Msa0621890 AT3G25440.1 36.022 186 108 4 565 742 149 331 4.45e-26 112
Msa0621890 AT2G28480.1 37.569 181 102 4 544 724 126 295 2.24e-24 106
Msa0621890 AT4G13070.1 40.000 140 75 4 580 718 173 304 1.51e-20 94.4
Msa0621890 AT3G27550.2 30.573 157 103 2 578 731 133 286 1.25e-13 74.7
Msa0621890 AT3G27550.3 30.573 157 103 2 578 731 77 230 1.58e-13 74.3
Msa0621890 AT3G27550.1 30.573 157 103 2 578 731 77 230 1.58e-13 74.3

Find 189 sgRNAs with CRISPR-Local

Find 414 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCGTGACAACAAGCTTT+TGG 0.215837 4_2:+74184879 None:intergenic
AACCTTACTTTCTAGAAATA+AGG 0.223126 4_2:-74185781 Msa0621890:CDS
CGAATTTGAAAATGTGGTTT+AGG 0.236636 4_2:+74189339 None:intergenic
AGGAATATATTGTAATTTAC+AGG 0.243412 4_2:-74185761 Msa0621890:CDS
GAAAATGTGGTTTAGGGTTT+TGG 0.266699 4_2:+74189346 None:intergenic
CAATTACCTGCTGTGGTTCC+AGG 0.270048 4_2:-74187966 Msa0621890:CDS
CACGATAAATAATTATTATA+TGG 0.271438 4_2:+74184935 None:intergenic
TGTGGTTGTTCCACTAGTTC+TGG 0.272480 4_2:+74189155 None:intergenic
TTCCCAACTTCTTGTTTACT+TGG 0.294491 4_2:+74185537 None:intergenic
TTGCTTAATCAGAGTAAAAC+TGG 0.294825 4_2:-74188323 Msa0621890:intron
CTTTCTCTTCCTCGTCTTGT+TGG 0.296198 4_2:+74185673 None:intergenic
CATCCTATCATTAGATGTAT+AGG 0.301240 4_2:+74187658 None:intergenic
ATGAAGCCATACTTACTTCT+AGG 0.301568 4_2:-74185220 Msa0621890:intron
TAAGCATATTGCGATATCTT+TGG 0.302210 4_2:-74185007 Msa0621890:CDS
GGGACCATTTATGTCGAATT+TGG 0.303111 4_2:+74189237 None:intergenic
ATTTCACATGTTACATTACT+TGG 0.304112 4_2:+74183992 None:intergenic
AGGTTCAGTGTTGGAGTTGC+TGG 0.308508 4_2:-74188825 Msa0621890:CDS
ACACCATATATCAGATTTAC+AGG 0.309479 4_2:-74184630 Msa0621890:CDS
ATTTATGTAAATATTTATTT+CGG 0.317577 4_2:-74183964 Msa0621890:three_prime_UTR
TTGTCTCTCAGTCAGGGTTT+TGG 0.325654 4_2:+74185710 None:intergenic
CTGACCAAATTCGACATAAA+TGG 0.334859 4_2:-74189241 Msa0621890:CDS
GAGATCTTTGTTTAGGAAGA+TGG 0.336007 4_2:-74185251 Msa0621890:CDS
AGCAGACCTTCCAACTGATT+TGG 0.336227 4_2:-74185293 Msa0621890:CDS
GAATTTGAAAATGTGGTTTA+GGG 0.336763 4_2:+74189340 None:intergenic
AAATTCTGGTGGTTCTGTTA+TGG 0.337329 4_2:-74188982 Msa0621890:CDS
TCTCCTGTAAATCTGATATA+TGG 0.341489 4_2:+74184627 None:intergenic
ATGAAGAGAGATCTTTGTTT+AGG 0.342661 4_2:-74185258 Msa0621890:CDS
CATGTCAGTCATTTCCTTGT+TGG 0.348961 4_2:+74187893 None:intergenic
TCTCAAATGCCGTTACTTGC+TGG 0.349600 4_2:-74185606 Msa0621890:CDS
TTCCTTATTTCTAGAAAGTA+AGG 0.350503 4_2:+74185779 None:intergenic
ACTGAGAAGATAAACAATAA+TGG 0.357339 4_2:-74184123 Msa0621890:three_prime_UTR
AAACGGGTACAGCGAAATTC+TGG 0.358562 4_2:-74188996 Msa0621890:CDS
AAATCAGTTGGAAGGTCTGC+TGG 0.363738 4_2:+74185295 None:intergenic
TGGGTCCGCGCTTCAAAGAT+TGG 0.371657 4_2:-74188022 Msa0621890:CDS
GAGGTTGTGGGTGTTCCTCT+TGG 0.371698 4_2:+74189129 None:intergenic
GTATTAGTAGTTTGAAGAAA+AGG 0.382826 4_2:-74188932 Msa0621890:CDS
TAGGGCAGCAACCGCCAATT+GGG 0.384752 4_2:-74185568 Msa0621890:CDS
TTATTCAGTGGAGTAGAGTT+TGG 0.387075 4_2:+74184452 None:intergenic
AACCTTCTGTTGGATGAGTT+GGG 0.390797 4_2:-74188041 Msa0621890:CDS
CTGAGAAGATAAACAATAAT+GGG 0.391960 4_2:-74184122 Msa0621890:three_prime_UTR
TTCTTACCTAGAAGTAAGTA+TGG 0.393391 4_2:+74185214 None:intergenic
AAGGAGAAGTAATACTGAAT+TGG 0.396918 4_2:-74188913 Msa0621890:CDS
TGCTGGTATTACTCAGGAAT+TGG 0.397390 4_2:-74188808 Msa0621890:CDS
TTCCAAAGCGTTTATCTCCT+TGG 0.399056 4_2:-74189094 Msa0621890:CDS
CAACCTTCTGTTGGATGAGT+TGG 0.405542 4_2:-74188042 Msa0621890:CDS
TTTGGAAACTCAAAATTAAG+AGG 0.412179 4_2:+74189110 None:intergenic
ATCCTATCATTAGATGTATA+GGG 0.412690 4_2:+74187659 None:intergenic
CTAGGGCAGCAACCGCCAAT+TGG 0.414139 4_2:-74185569 Msa0621890:CDS
TTTCGGTATAAGAATGATGA+AGG 0.419967 4_2:-74183947 Msa0621890:three_prime_UTR
AGGTTGTGGGTGTTCCTCTT+GGG 0.420559 4_2:+74189130 None:intergenic
GAGAAATACCTTGAGTTCTT+CGG 0.424079 4_2:+74187634 None:intergenic
AACTCAAAATTAAGAGGTTG+TGG 0.427382 4_2:+74189116 None:intergenic
CAACCAAGTAAACAAGAAGT+TGG 0.431444 4_2:-74185540 Msa0621890:CDS
ATATCGCAATATGCTTAACT+TGG 0.431744 4_2:+74185013 None:intergenic
TTCTACGCAAGGCAGCTTGT+AGG 0.432727 4_2:+74188247 None:intergenic
AAGTAATGTAACATGTGAAA+TGG 0.434746 4_2:-74183990 Msa0621890:three_prime_UTR
TTTCACATGTTACATTACTT+GGG 0.436982 4_2:+74183993 None:intergenic
TTGGGGTATTCCTACGACAT+TGG 0.437569 4_2:+74184011 None:intergenic
ATAGGGAACTCCACGTTTGA+TGG 0.437793 4_2:+74187676 None:intergenic
TGTTGTTGTTGTTCTTGCCA+TGG 0.438189 4_2:+74189185 None:intergenic
ATGCATTTGCAGAAATTGAC+TGG 0.442160 4_2:-74185807 Msa0621890:intron
ATTGGCGGAGAAGTTGATTC+CGG 0.442381 4_2:-74188895 Msa0621890:CDS
GGTATTGTGGTGTGGCGATC+GGG 0.444388 4_2:-74188299 Msa0621890:CDS
GTTGCAGAGACTGAGAAATA+TGG 0.447718 4_2:-74188865 Msa0621890:CDS
ACTTGGTTGATGTCCCCAAT+TGG 0.449038 4_2:+74185554 None:intergenic
GAAGGATTTAGCTAAAATAC+AGG 0.450289 4_2:-74185329 Msa0621890:CDS
TGCCAAGGAGATAAACGCTT+TGG 0.451646 4_2:+74189092 None:intergenic
TCTTACACGAAAGTATATAA+TGG 0.454878 4_2:-74188224 Msa0621890:CDS
GTTGTTGTTGTTCTTGCCAT+GGG 0.460640 4_2:+74189186 None:intergenic
CGAATTTGGTCAGAGAAACT+TGG 0.461613 4_2:+74189251 None:intergenic
TCTCGATTAAAAGATTCAAT+AGG 0.464473 4_2:+74188122 None:intergenic
TTCCCTATACATCTAATGAT+AGG 0.466667 4_2:-74187661 Msa0621890:CDS
AAGCTTGTTGTCACGAAGAC+AGG 0.466888 4_2:-74184875 Msa0621890:CDS
AATGATGAGAGAATCTACTT+TGG 0.470218 4_2:-74185514 Msa0621890:CDS
AATAATTATTATATGGCCCT+TGG 0.473196 4_2:+74184942 None:intergenic
GGTAATTGATCAGCATCAAC+AGG 0.474127 4_2:+74187981 None:intergenic
TGGAACCCTTGCTGAGACTA+GGG 0.474177 4_2:-74185586 Msa0621890:CDS
AGATCTTTGTTTAGGAAGAT+GGG 0.477491 4_2:-74185250 Msa0621890:CDS
CTGGAACCCTTGCTGAGACT+AGG 0.478799 4_2:-74185587 Msa0621890:CDS
CATTCAGACTTCTTCCGTAT+GGG 0.480915 4_2:-74187932 Msa0621890:CDS
TGGACAATTCAGTGGATGTT+GGG 0.481308 4_2:-74188187 Msa0621890:CDS
GATCGAACTCAACCTTCTGT+TGG 0.482859 4_2:-74188051 Msa0621890:CDS
CGAGGTCTTTCATGTCATCA+TGG 0.485625 4_2:+74184414 None:intergenic
AGACTCTGCAGAGTATTTGA+AGG 0.486990 4_2:-74188102 Msa0621890:CDS
AGACAAAGATAATGTGAAAC+GGG 0.489498 4_2:-74189012 Msa0621890:CDS
TGAAATAAGTGTGAAAGAAA+TGG 0.489780 4_2:-74188150 Msa0621890:CDS
TTGATCAGCATCAACAGGTA+AGG 0.490123 4_2:+74187986 None:intergenic
AGGTATTGTGGTGTGGCGAT+CGG 0.490697 4_2:-74188300 Msa0621890:CDS
AGTCTCTGCAACTCATGTTC+CGG 0.491693 4_2:+74188876 None:intergenic
AACCAAGTAAACAAGAAGTT+GGG 0.491842 4_2:-74185539 Msa0621890:CDS
GGGTGTTCCTCTTGGGATTG+TGG 0.496204 4_2:+74189137 None:intergenic
AAGACAAAGATAATGTGAAA+CGG 0.505781 4_2:-74189013 Msa0621890:CDS
GTTAATGTCTCCAAATCAGT+TGG 0.506886 4_2:+74185283 None:intergenic
GTGTTTGGGAAGCTAATTTG+AGG 0.509014 4_2:+74189216 None:intergenic
CCATTCAGACTTCTTCCGTA+TGG 0.509793 4_2:-74187933 Msa0621890:CDS
TGTTTGGGAAGCTAATTTGA+GGG 0.512273 4_2:+74189217 None:intergenic
CATATAATAATTATTTATCG+TGG 0.512686 4_2:-74184934 Msa0621890:CDS
TTATACCCTGGAACCACAGC+AGG 0.514036 4_2:+74187960 None:intergenic
AAAGTGCGAATTTGAAAATG+TGG 0.516033 4_2:+74189333 None:intergenic
TTCCAATTCCAACCACAAAA+CGG 0.516825 4_2:-74189306 Msa0621890:CDS
TGCATTTGCAGAAATTGACT+GGG 0.522489 4_2:-74185806 Msa0621890:intron
CACGAAAGTATATAATGGTA+AGG 0.522498 4_2:-74188219 Msa0621890:CDS
TGCTGATCAATTACCTGCTG+TGG 0.523115 4_2:-74187973 Msa0621890:CDS
GGTAGGCGGGATGTTTATGC+TGG 0.532035 4_2:-74185111 Msa0621890:CDS
ACGGCGCCACACTTTGCCCT+TGG 0.532852 4_2:-74187852 Msa0621890:intron
GAGAAGTAATACTGAATTGG+CGG 0.534782 4_2:-74188910 Msa0621890:CDS
AAACAAGGTTTCACCCCATA+CGG 0.539368 4_2:+74187918 None:intergenic
GAAACATGGTTGTTATTCAG+TGG 0.543846 4_2:+74184440 None:intergenic
CATGAGTGAAGAAGAATCGA+TGG 0.544193 4_2:-74188078 Msa0621890:CDS
AATTCAGTGGATGTTGGGAG+TGG 0.546760 4_2:-74188182 Msa0621890:CDS
GGAAGAAGTAGAGAACTTCA+AGG 0.547852 4_2:-74187752 Msa0621890:CDS
ATGGTGGAGAGGTTCAGTGT+TGG 0.549002 4_2:-74188834 Msa0621890:CDS
AATTACCTGCTGTGGTTCCA+GGG 0.549523 4_2:-74187965 Msa0621890:CDS
TTCACATGTTACATTACTTG+GGG 0.553912 4_2:+74183994 None:intergenic
ACTCAAAATTAAGAGGTTGT+GGG 0.554963 4_2:+74189117 None:intergenic
CTTTGGAAGCTGAGAGTGGT+GGG 0.555129 4_2:-74184990 Msa0621890:CDS
GTGGACAATTCAGTGGATGT+TGG 0.556615 4_2:-74188188 Msa0621890:CDS
TTGCTGCCCTAGTCTCAGCA+AGG 0.558727 4_2:+74185580 None:intergenic
GGAATATATTGTAATTTACA+GGG 0.559154 4_2:-74185760 Msa0621890:CDS
GAGAAATATGGCGTTGAGGA+TGG 0.559402 4_2:-74188853 Msa0621890:CDS
GAGTAAAACTGGAGGTATTG+TGG 0.560101 4_2:-74188312 Msa0621890:CDS
AAATATGGCGTTGAGGATGG+TGG 0.563812 4_2:-74188850 Msa0621890:CDS
GTTGTCACGAAGACAGGCAT+TGG 0.566651 4_2:-74184869 Msa0621890:CDS
ATATAATAATTATTTATCGT+GGG 0.568217 4_2:-74184933 Msa0621890:CDS
TCTTTGGAAGCTGAGAGTGG+TGG 0.568769 4_2:-74184991 Msa0621890:CDS
GTTCCATGCGACACATCAAA+AGG 0.568788 4_2:+74184068 None:intergenic
CTATACATCTAATGATAGGA+TGG 0.569547 4_2:-74187657 Msa0621890:CDS
TGGAGTTGCTGGTATTACTC+AGG 0.570067 4_2:-74188814 Msa0621890:CDS
CCGCGCTTCAAAGATTGGAC+AGG 0.571785 4_2:-74188017 Msa0621890:CDS
TAGAAAACATGCATCTACAC+TGG 0.573476 4_2:-74185083 Msa0621890:CDS
ACAAGACAAACCAGAACTAG+TGG 0.574074 4_2:-74189165 Msa0621890:CDS
ATTCAGACTTCTTCCGTATG+GGG 0.575842 4_2:-74187931 Msa0621890:CDS
AATCAGTTGGAAGGTCTGCT+GGG 0.575969 4_2:+74185296 None:intergenic
ACATTCCTCGATATAACACT+AGG 0.578174 4_2:+74188270 None:intergenic
TATCGCAATATGCTTAACTT+GGG 0.578620 4_2:+74185014 None:intergenic
TTCGTGTAAGATTCTACGCA+AGG 0.581312 4_2:+74188236 None:intergenic
TGATCAGCATCAACAGGTAA+GGG 0.585666 4_2:+74187987 None:intergenic
TGGTATTACTCAGGAATTGG+TGG 0.587892 4_2:-74188805 Msa0621890:CDS
ATGTCTCCAAATCAGTTGGA+AGG 0.588053 4_2:+74185287 None:intergenic
GAGGTCTTTCATGTCATCAT+GGG 0.588523 4_2:+74184415 None:intergenic
ATCTGTAGACAAGGATACCA+AGG 0.589472 4_2:-74184959 Msa0621890:CDS
TGGGTCTCATAACCTGTGGA+CGG 0.596006 4_2:+74184899 None:intergenic
GCGTTTATCTCCTTGGCACG+TGG 0.599426 4_2:-74189087 Msa0621890:CDS
CTAGAGCTATAGTAAAGCTG+TGG 0.601734 4_2:-74187724 Msa0621890:CDS
TAGAGCTATAGTAAAGCTGT+GGG 0.602614 4_2:-74187723 Msa0621890:CDS
ATTCAGTGGATGTTGGGAGT+GGG 0.602998 4_2:-74188181 Msa0621890:CDS
ATTTCCTTGTTGGATAAACA+AGG 0.603660 4_2:+74187903 None:intergenic
AAGGTTCAGGAAGTCTGAGA+AGG 0.605613 4_2:-74185347 Msa0621890:CDS
CCATACGGAAGAAGTCTGAA+TGG 0.606838 4_2:+74187933 None:intergenic
TAGGATGGCCGAAGAACTCA+AGG 0.607091 4_2:-74187642 Msa0621890:intron
GAATATATTGTAATTTACAG+GGG 0.614122 4_2:-74185759 Msa0621890:CDS
GCAAGGGTTCCAGCAAGTAA+CGG 0.614542 4_2:+74185597 None:intergenic
TGGTTGATGTCCCCAATTGG+CGG 0.616228 4_2:+74185557 None:intergenic
TGTCATCATGGGAAGAAACA+TGG 0.616340 4_2:+74184426 None:intergenic
ACACTGGAAATATCGCGAGT+TGG 0.619243 4_2:-74185067 Msa0621890:CDS
ATGCGACACATCAAAAGGCA+TGG 0.620367 4_2:+74184073 None:intergenic
AGGGCAGCAACCGCCAATTG+GGG 0.622870 4_2:-74185567 Msa0621890:CDS
GACTGAGAAATATGGCGTTG+AGG 0.626272 4_2:-74188857 Msa0621890:CDS
GACCCAACTCATCCAACAGA+AGG 0.627115 4_2:+74188039 None:intergenic
ATAAGTGTGAAAGAAATGGT+TGG 0.627154 4_2:-74188146 Msa0621890:CDS
AAGAGCTCATCAAATTCTCG+AGG 0.628328 4_2:-74188706 Msa0621890:intron
TGCTGCCCTAGTCTCAGCAA+GGG 0.628919 4_2:+74185581 None:intergenic
AGGAAATGACTGACATGCGT+AGG 0.633226 4_2:-74187887 Msa0621890:CDS
AGATTTCTATCCAATGTCGT+AGG 0.634292 4_2:-74184021 Msa0621890:three_prime_UTR
GTTTCTGAAGCAGAGAAACA+CGG 0.634932 4_2:-74189840 Msa0621890:five_prime_UTR
AACTGTTCTCCAACAAGACG+AGG 0.635550 4_2:-74185682 Msa0621890:CDS
CATTCCTCGATATAACACTA+GGG 0.644587 4_2:+74188271 None:intergenic
GCGTAGGATTGCTAGAAGAA+CGG 0.645784 4_2:-74187871 Msa0621890:CDS
GAAGAACTACTTCCGTCCAC+AGG 0.649230 4_2:-74184911 Msa0621890:CDS
TAATGGTAAGGAGAATGCTG+TGG 0.650593 4_2:-74188207 Msa0621890:CDS
TGCATACCAAGGGCAAAGTG+TGG 0.656479 4_2:+74187846 None:intergenic
GAATGCTGTGGACAATTCAG+TGG 0.657859 4_2:-74188195 Msa0621890:CDS
TGGCGTTGAGGATGGTGGAG+AGG 0.659099 4_2:-74188845 Msa0621890:CDS
TTTGGAAGCTGAGAGTGGTG+GGG 0.660912 4_2:-74184989 Msa0621890:CDS
CGGGTACAGCGAAATTCTGG+TGG 0.662432 4_2:-74188993 Msa0621890:CDS
GAAACCTTGTTTATCCAACA+AGG 0.665865 4_2:-74187907 Msa0621890:CDS
GGTGCTAGTATCTGTAGACA+AGG 0.666036 4_2:-74184968 Msa0621890:CDS
GCATTTGCAGAAATTGACTG+GGG 0.670583 4_2:-74185805 Msa0621890:intron
CTTAATCAGAGTAAAACTGG+AGG 0.676737 4_2:-74188320 Msa0621890:intron
TCTGTAGACAAGGATACCAA+GGG 0.682121 4_2:-74184958 Msa0621890:CDS
TATTGAGCTTCAAAGACGAG+AGG 0.684121 4_2:-74184839 Msa0621890:intron
CCTGTCCAATCTTTGAAGCG+CGG 0.686187 4_2:+74188017 None:intergenic
AGTTCCCTAGTGTTATATCG+AGG 0.691104 4_2:-74188275 Msa0621890:CDS
CATTTGCAGAAATTGACTGG+GGG 0.692019 4_2:-74185804 Msa0621890:intron
ATATCTTTGGAAGCTGAGAG+TGG 0.692298 4_2:-74184994 Msa0621890:CDS
AAGGATTTAGCTAAAATACA+GGG 0.697797 4_2:-74185328 Msa0621890:CDS
CTGAAGCAGAGAAACACGGA+AGG 0.703195 4_2:-74189836 Msa0621890:five_prime_UTR
AAACTGGAGGTATTGTGGTG+TGG 0.705901 4_2:-74188307 Msa0621890:CDS
GGAACAACCACAATCCCAAG+AGG 0.708063 4_2:-74189144 Msa0621890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAAACAAAATTTTTTAT+GGG + chr4_2:74187749-74187768 None:intergenic 10.0%
!!! TAATCAAACAAAATTTTTTA+TGG + chr4_2:74187750-74187769 None:intergenic 10.0%
!! ATCTAACTTTATAAATTATA+TGG - chr4_2:74188406-74188425 Msa0621890:intron 10.0%
!! TTTATAAATTATATGGTTAT+AGG - chr4_2:74188413-74188432 Msa0621890:intron 10.0%
!! ATATAATAATTATTTATCGT+GGG - chr4_2:74188857-74188876 Msa0621890:CDS 10.0%
!! TAAATAACTAAGGATAATAT+TGG - chr4_2:74184211-74184230 Msa0621890:three_prime_UTR 15.0%
!!! ACTGTTTAATTTAATTGTAT+TGG - chr4_2:74186206-74186225 Msa0621890:intron 15.0%
!! AATAGATAATATACTATTAC+AGG - chr4_2:74186687-74186706 Msa0621890:intron 15.0%
!!! TTATTAAATTTTTATGTCAG+TGG + chr4_2:74186955-74186974 None:intergenic 15.0%
!!! TAACTTTTTTTAATGAGTTT+TGG - chr4_2:74187721-74187740 Msa0621890:CDS 15.0%
!!! AACTTTTTTTAATGAGTTTT+GGG - chr4_2:74187722-74187741 Msa0621890:CDS 15.0%
!! TTTATAAAGTTAGATAGATA+TGG + chr4_2:74188401-74188420 None:intergenic 15.0%
!! CACGATAAATAATTATTATA+TGG + chr4_2:74188858-74188877 None:intergenic 15.0%
!! CATATAATAATTATTTATCG+TGG - chr4_2:74188856-74188875 Msa0621890:CDS 15.0%
!!! TAAAGCAATAATTTCTTTTT+TGG - chr4_2:74188977-74188996 Msa0621890:CDS 15.0%
!!! ACTTTCTAATTTTTTTTTTC+AGG - chr4_2:74189130-74189149 Msa0621890:CDS 15.0%
!! ATATTGCTACTAAATATTAT+TGG + chr4_2:74189468-74189487 None:intergenic 15.0%
!! TCAAAAAGTGACAATTAAAA+AGG + chr4_2:74184072-74184091 None:intergenic 20.0%
!! AATGAGATGTTAAATGAATA+AGG + chr4_2:74184169-74184188 None:intergenic 20.0%
!! TTATCCTTAGTTATTTATTG+CGG + chr4_2:74184208-74184227 None:intergenic 20.0%
!! TTACTTATCTATATTCATCA+AGG - chr4_2:74185138-74185157 Msa0621890:intron 20.0%
!!! GTAAAGAATAGTAAATCTTT+TGG + chr4_2:74186011-74186030 None:intergenic 20.0%
!!! TTTTTCTGTTGTAATAAACA+TGG + chr4_2:74186624-74186643 None:intergenic 20.0%
!!! GATAGTTTTCAAATGATTTT+GGG + chr4_2:74186755-74186774 None:intergenic 20.0%
!!! CAGTTATGTTGTTTAATTTT+AGG + chr4_2:74186814-74186833 None:intergenic 20.0%
!! AATGTGTTATACTTATGTTA+TGG + chr4_2:74186870-74186889 None:intergenic 20.0%
!! ATAAAAAGAGATAGAATCAT+GGG - chr4_2:74187168-74187187 Msa0621890:intron 20.0%
!! TCTTATGTATGATATAATGT+TGG + chr4_2:74187199-74187218 None:intergenic 20.0%
!! AAAAGAAAACGATAATTTCA+AGG + chr4_2:74187429-74187448 None:intergenic 20.0%
!!! TTTTCTTTTGTAACATTATC+AGG - chr4_2:74187440-74187459 Msa0621890:intron 20.0%
!!! TTTCTTTTGTAACATTATCA+GGG - chr4_2:74187441-74187460 Msa0621890:intron 20.0%
!!! AGTTTTTTGCAATTTAGAAA+GGG + chr4_2:74187483-74187502 None:intergenic 20.0%
!! AAAAAAGTTAGAACAATATG+AGG + chr4_2:74187711-74187730 None:intergenic 20.0%
!! AGGAATATATTGTAATTTAC+AGG - chr4_2:74188029-74188048 Msa0621890:CDS 20.0%
!! GGAATATATTGTAATTTACA+GGG - chr4_2:74188030-74188049 Msa0621890:CDS 20.0%
!! GAATATATTGTAATTTACAG+GGG - chr4_2:74188031-74188050 Msa0621890:CDS 20.0%
!!! AATAATTTCTTTTTTGGTAG+TGG - chr4_2:74188983-74189002 Msa0621890:CDS 20.0%
!!! GTTCATGATTTTGATTTTAG+TGG - chr4_2:74183981-74184000 Msa0621890:three_prime_UTR 25.0%
!!! AGATAGTAGTGTTTTTTCAA+TGG - chr4_2:74184007-74184026 Msa0621890:three_prime_UTR 25.0%
!!! GATAGTAGTGTTTTTTCAAT+GGG - chr4_2:74184008-74184027 Msa0621890:three_prime_UTR 25.0%
! AAGTGACAATTAAAAAGGAA+CGG + chr4_2:74184067-74184086 None:intergenic 25.0%
!! GTAACAATTATTGATTGTCT+TGG + chr4_2:74184108-74184127 None:intergenic 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG - chr4_2:74184262-74184281 Msa0621890:intron 25.0%
! GAATTTGAAAATGTGGTTTA+GGG + chr4_2:74184453-74184472 None:intergenic 25.0%
! TTTGGAAACTCAAAATTAAG+AGG + chr4_2:74184683-74184702 None:intergenic 25.0%
! AAGACAAAGATAATGTGAAA+CGG - chr4_2:74184777-74184796 Msa0621890:intron 25.0%
! GTATTAGTAGTTTGAAGAAA+AGG - chr4_2:74184858-74184877 Msa0621890:CDS 25.0%
! AGTAAACTGATAATATGAGA+GGG + chr4_2:74185123-74185142 None:intergenic 25.0%
! AAGTAAACTGATAATATGAG+AGG + chr4_2:74185124-74185143 None:intergenic 25.0%
!!! ATTAAGTTGATTGTCCAAAA+TGG - chr4_2:74185342-74185361 Msa0621890:CDS 25.0%
!!! TTAAGTTGATTGTCCAAAAT+GGG - chr4_2:74185343-74185362 Msa0621890:CDS 25.0%
! GTTCAAATATTCTCTGATAA+AGG + chr4_2:74185414-74185433 None:intergenic 25.0%
!! TCTTACACGAAAGTATATAA+TGG - chr4_2:74185566-74185585 Msa0621890:CDS 25.0%
! TGAAATAAGTGTGAAAGAAA+TGG - chr4_2:74185640-74185659 Msa0621890:CDS 25.0%
! TCTCGATTAAAAGATTCAAT+AGG + chr4_2:74185671-74185690 None:intergenic 25.0%
! ATCCTATCATTAGATGTATA+GGG + chr4_2:74186134-74186153 None:intergenic 25.0%
!! TAATATTGTCCAATTTCTAG+CGG + chr4_2:74186187-74186206 None:intergenic 25.0%
!! GGAATTTTATCATGCTTAAA+AGG - chr4_2:74186227-74186246 Msa0621890:intron 25.0%
! TTCTTGTAAATGAGAATATC+AGG - chr4_2:74186327-74186346 Msa0621890:intron 25.0%
! TCTTGTAAATGAGAATATCA+GGG - chr4_2:74186328-74186347 Msa0621890:intron 25.0%
!! GCATTAGACAAAAGTATAAT+GGG + chr4_2:74186373-74186392 None:intergenic 25.0%
!! TGCATTAGACAAAAGTATAA+TGG + chr4_2:74186374-74186393 None:intergenic 25.0%
!! TTTTCATCTGAAAATAGCAA+AGG - chr4_2:74186486-74186505 Msa0621890:intron 25.0%
! ACATTTATCAGAAAATGAAG+TGG + chr4_2:74186520-74186539 None:intergenic 25.0%
! TCTACAGTTAAATCGTATTT+CGG + chr4_2:74186580-74186599 None:intergenic 25.0%
!!! TGTAGAAACTGTCTTTTTTA+TGG - chr4_2:74186594-74186613 Msa0621890:intron 25.0%
!! GGATAGTTTTCAAATGATTT+TGG + chr4_2:74186756-74186775 None:intergenic 25.0%
! TAATAAAAAATTCCAAGCAC+AGG - chr4_2:74186969-74186988 Msa0621890:intron 25.0%
!! ATAAGCATGATATATTTTCC+TGG - chr4_2:74187015-74187034 Msa0621890:intron 25.0%
!! TAAGCATGATATATTTTCCT+GGG - chr4_2:74187016-74187035 Msa0621890:intron 25.0%
! TTCTATGTGTAGAAAGAAAT+AGG - chr4_2:74187052-74187071 Msa0621890:intron 25.0%
! TCTATGTGTAGAAAGAAATA+GGG - chr4_2:74187053-74187072 Msa0621890:intron 25.0%
! ATGCTATTATGTTTATTCCT+TGG - chr4_2:74187079-74187098 Msa0621890:intron 25.0%
! GATAAAAAGAGATAGAATCA+TGG - chr4_2:74187167-74187186 Msa0621890:intron 25.0%
!!! GTTTTTTGCAATTTAGAAAG+GGG + chr4_2:74187482-74187501 None:intergenic 25.0%
!!! GAGTTTTTTGCAATTTAGAA+AGG + chr4_2:74187484-74187503 None:intergenic 25.0%
! TCTAAATTGCAAAAAACTCT+TGG - chr4_2:74187485-74187504 Msa0621890:intron 25.0%
!!! TCTTACAAGACTTTGAAATA+TGG + chr4_2:74187838-74187857 None:intergenic 25.0%
! TGTTCCTTTCTTTAAACTTA+TGG - chr4_2:74187948-74187967 Msa0621890:CDS 25.0%
! AACACCATAAGTTTAAAGAA+AGG + chr4_2:74187955-74187974 None:intergenic 25.0%
!! AACCTTACTTTCTAGAAATA+AGG - chr4_2:74188009-74188028 Msa0621890:CDS 25.0%
!!! TTCCTTATTTCTAGAAAGTA+AGG + chr4_2:74188014-74188033 None:intergenic 25.0%
! AAGGATTTAGCTAAAATACA+GGG - chr4_2:74188462-74188481 Msa0621890:intron 25.0%
! TTGGTAAAAATACTTGTGAA+AGG - chr4_2:74188742-74188761 Msa0621890:CDS 25.0%
! TGGTAAAAATACTTGTGAAA+GGG - chr4_2:74188743-74188762 Msa0621890:CDS 25.0%
! AATAATTATTATATGGCCCT+TGG + chr4_2:74188851-74188870 None:intergenic 25.0%
!! TTACTCTGCTGTAATAATTT+TGG - chr4_2:74189236-74189255 Msa0621890:CDS 25.0%
!!! AGTTTTTTGTTGTTGATTTC+AGG - chr4_2:74189281-74189300 Msa0621890:CDS 25.0%
!!! TTTTTTCATAGACAAATACC+AGG - chr4_2:74189405-74189424 Msa0621890:exon 25.0%
! GCTACTAAATATTATTGGTA+AGG + chr4_2:74189463-74189482 None:intergenic 25.0%
!! TTTTTCCAAAGAGAATAATG+GGG + chr4_2:74189550-74189569 None:intergenic 25.0%
!! GTTTTTCCAAAGAGAATAAT+GGG + chr4_2:74189551-74189570 None:intergenic 25.0%
!! AGTTTTTCCAAAGAGAATAA+TGG + chr4_2:74189552-74189571 None:intergenic 25.0%
!!! ATTCATTTTGATAAAGACGA+CGG - chr4_2:74189588-74189607 Msa0621890:intron 25.0%
! ACTGAGAAGATAAACAATAA+TGG - chr4_2:74189667-74189686 Msa0621890:intron 25.0%
! CTGAGAAGATAAACAATAAT+GGG - chr4_2:74189668-74189687 Msa0621890:intron 25.0%
! TTTCACATGTTACATTACTT+GGG + chr4_2:74189800-74189819 None:intergenic 25.0%
! ATTTCACATGTTACATTACT+TGG + chr4_2:74189801-74189820 None:intergenic 25.0%
! AAGTAATGTAACATGTGAAA+TGG - chr4_2:74189800-74189819 Msa0621890:five_prime_UTR 25.0%
TCCAAAAGTGACACTTAAAA+AGG - chr4_2:74184298-74184317 Msa0621890:intron 30.0%
!!! TCCTTTTTAAGTGTCACTTT+TGG + chr4_2:74184302-74184321 None:intergenic 30.0%
AAGTGACACTTAAAAAGGAA+CGG - chr4_2:74184303-74184322 Msa0621890:intron 30.0%
!!! GCTTTTTTTTGGTTTGATGA+TGG + chr4_2:74184349-74184368 None:intergenic 30.0%
AAATCAAAAATGGTTGCAAG+AGG + chr4_2:74184371-74184390 None:intergenic 30.0%
!!! TGCAACCATTTTTGATTTCA+TGG - chr4_2:74184373-74184392 Msa0621890:intron 30.0%
CGAATTTGAAAATGTGGTTT+AGG + chr4_2:74184454-74184473 None:intergenic 30.0%
AAAGTGCGAATTTGAAAATG+TGG + chr4_2:74184460-74184479 None:intergenic 30.0%
ACTCAAAATTAAGAGGTTGT+GGG + chr4_2:74184676-74184695 None:intergenic 30.0%
AACTCAAAATTAAGAGGTTG+TGG + chr4_2:74184677-74184696 None:intergenic 30.0%
! CAGATTCTGAATCATTTTGT+GGG + chr4_2:74184748-74184767 None:intergenic 30.0%
! TCAGATTCTGAATCATTTTG+TGG + chr4_2:74184749-74184768 None:intergenic 30.0%
AGACAAAGATAATGTGAAAC+GGG - chr4_2:74184778-74184797 Msa0621890:intron 30.0%
AAGGAGAAGTAATACTGAAT+TGG - chr4_2:74184877-74184896 Msa0621890:CDS 30.0%
TGGATGCTATTCATGAAAAA+TGG - chr4_2:74185005-74185024 Msa0621890:CDS 30.0%
TGCTATTCATGAAAAATGGA+TGG - chr4_2:74185009-74185028 Msa0621890:CDS 30.0%
! CTTTTCATATTAGCAGAAAG+AGG + chr4_2:74185067-74185086 None:intergenic 30.0%
AATATTCTCTGATAAAGGAC+AGG + chr4_2:74185409-74185428 None:intergenic 30.0%
TTGCTTAATCAGAGTAAAAC+TGG - chr4_2:74185467-74185486 Msa0621890:CDS 30.0%
! CACGAAAGTATATAATGGTA+AGG - chr4_2:74185571-74185590 Msa0621890:CDS 30.0%
ATAAGTGTGAAAGAAATGGT+TGG - chr4_2:74185644-74185663 Msa0621890:CDS 30.0%
ATTTCCTTGTTGGATAAACA+AGG + chr4_2:74185890-74185909 None:intergenic 30.0%
TTCCCTATACATCTAATGAT+AGG - chr4_2:74186129-74186148 Msa0621890:intron 30.0%
CATCCTATCATTAGATGTAT+AGG + chr4_2:74186135-74186154 None:intergenic 30.0%
CTATACATCTAATGATAGGA+TGG - chr4_2:74186133-74186152 Msa0621890:intron 30.0%
CAATTGAAACATGAGCATAT+AGG - chr4_2:74186395-74186414 Msa0621890:intron 30.0%
GTTTCTAACACAATGAGAAA+AGG + chr4_2:74186552-74186571 None:intergenic 30.0%
TTTCTCATTGTGTTAGAAAC+AGG - chr4_2:74186552-74186571 Msa0621890:intron 30.0%
!! GTTTTCAAATGATTTTGGGA+GGG + chr4_2:74186751-74186770 None:intergenic 30.0%
! AGTTTTCAAATGATTTTGGG+AGG + chr4_2:74186752-74186771 None:intergenic 30.0%
GGAATAAATAGAGCAATGAA+AGG + chr4_2:74186793-74186812 None:intergenic 30.0%
AGAATATCGTTTATTTACCC+AGG + chr4_2:74187036-74187055 None:intergenic 30.0%
GTAATTGTGATCCAAAACAA+AGG + chr4_2:74187407-74187426 None:intergenic 30.0%
! TAATGCGATTTTCTACATGT+GGG + chr4_2:74187573-74187592 None:intergenic 30.0%
! ATAATGCGATTTTCTACATG+TGG + chr4_2:74187574-74187593 None:intergenic 30.0%
CATGTAGAAAATCGCATTAT+AGG - chr4_2:74187574-74187593 Msa0621890:intron 30.0%
TTATAGGTGGTCAATATTCA+CGG - chr4_2:74187590-74187609 Msa0621890:intron 30.0%
! TCACGGTTTGATAATATTCA+TGG - chr4_2:74187607-74187626 Msa0621890:intron 30.0%
! CACGGTTTGATAATATTCAT+GGG - chr4_2:74187608-74187627 Msa0621890:intron 30.0%
! TTTGTAGTATTCGTGCATTT+TGG - chr4_2:74187802-74187821 Msa0621890:intron 30.0%
!! TACAAGACTTTGAAATATGG+TGG + chr4_2:74187835-74187854 None:intergenic 30.0%
CTTGTTCATAATTTATCCTG+TGG - chr4_2:74187905-74187924 Msa0621890:CDS 30.0%
AACCAAGTAAACAAGAAGTT+GGG - chr4_2:74188251-74188270 Msa0621890:CDS 30.0%
AATGATGAGAGAATCTACTT+TGG - chr4_2:74188276-74188295 Msa0621890:CDS 30.0%
TATGGTTATAGGCAAAAACA+AGG - chr4_2:74188424-74188443 Msa0621890:intron 30.0%
GAAGGATTTAGCTAAAATAC+AGG - chr4_2:74188461-74188480 Msa0621890:intron 30.0%
! ATGAAGAGAGATCTTTGTTT+AGG - chr4_2:74188532-74188551 Msa0621890:intron 30.0%
! AGATCTTTGTTTAGGAAGAT+GGG - chr4_2:74188540-74188559 Msa0621890:intron 30.0%
TTCTTACCTAGAAGTAAGTA+TGG + chr4_2:74188579-74188598 None:intergenic 30.0%
! ATGTTAAGCATGAGATTTTC+AGG - chr4_2:74188658-74188677 Msa0621890:intron 30.0%
TATCGCAATATGCTTAACTT+GGG + chr4_2:74188779-74188798 None:intergenic 30.0%
ATATCGCAATATGCTTAACT+TGG + chr4_2:74188780-74188799 None:intergenic 30.0%
TAAGCATATTGCGATATCTT+TGG - chr4_2:74188783-74188802 Msa0621890:CDS 30.0%
!!! ATTTCTTTTTTGGTAGTGGT+CGG - chr4_2:74188987-74189006 Msa0621890:CDS 30.0%
GACAATGCATAAAATATGCA+AGG + chr4_2:74189028-74189047 None:intergenic 30.0%
ACACCATATATCAGATTTAC+AGG - chr4_2:74189160-74189179 Msa0621890:CDS 30.0%
TCTCCTGTAAATCTGATATA+TGG + chr4_2:74189166-74189185 None:intergenic 30.0%
!!! CTGCTGTAATAATTTTGGTT+AGG - chr4_2:74189241-74189260 Msa0621890:CDS 30.0%
!!! TTTTTGTTGTTGATTTCAGG+AGG - chr4_2:74189284-74189303 Msa0621890:CDS 30.0%
AGGAGGATATGAAAAATCAA+AGG - chr4_2:74189301-74189320 Msa0621890:CDS 30.0%
GGAGGATATGAAAAATCAAA+GGG - chr4_2:74189302-74189321 Msa0621890:CDS 30.0%
AAAAATCAAAGGGTGATTGA+TGG - chr4_2:74189312-74189331 Msa0621890:CDS 30.0%
!! TCTATGAAAAAAGAGTATCG+AGG + chr4_2:74189397-74189416 None:intergenic 30.0%
GGAAAAAAATAAGAGGAACA+AGG + chr4_2:74189528-74189547 None:intergenic 30.0%
TAATGGGGGAAAAAAATAAG+AGG + chr4_2:74189535-74189554 None:intergenic 30.0%
! TTTTCCAAAGAGAATAATGG+GGG + chr4_2:74189549-74189568 None:intergenic 30.0%
! CTTTGGAAAAACTAGAATGA+AGG - chr4_2:74189559-74189578 Msa0621890:intron 30.0%
TTCACATGTTACATTACTTG+GGG + chr4_2:74189799-74189818 None:intergenic 30.0%
TTTCGGTATAAGAATGATGA+AGG - chr4_2:74189843-74189862 Msa0621890:five_prime_UTR 30.0%
!!! AGTAGTGTTTTTTCAATGGG+AGG - chr4_2:74184011-74184030 Msa0621890:three_prime_UTR 35.0%
TGACAATTAAAAAGGAACGG+AGG + chr4_2:74184064-74184083 None:intergenic 35.0%
CTCTCCGCAATAAATAACTA+AGG - chr4_2:74184201-74184220 Msa0621890:three_prime_UTR 35.0%
TAGCGCCATGAAATCAAAAA+TGG + chr4_2:74184381-74184400 None:intergenic 35.0%
!! GAAAATGTGGTTTAGGGTTT+TGG + chr4_2:74184447-74184466 None:intergenic 35.0%
TTCCAATTCCAACCACAAAA+CGG - chr4_2:74184484-74184503 Msa0621890:CDS 35.0%
CTGACCAAATTCGACATAAA+TGG - chr4_2:74184549-74184568 Msa0621890:intron 35.0%
TGTTTGGGAAGCTAATTTGA+GGG + chr4_2:74184576-74184595 None:intergenic 35.0%
! CCATGGGAATTTTTGTGTTT+GGG + chr4_2:74184591-74184610 None:intergenic 35.0%
!!! CATTTTGTGGGTGTTGTTTA+GGG + chr4_2:74184736-74184755 None:intergenic 35.0%
!!! TCATTTTGTGGGTGTTGTTT+AGG + chr4_2:74184737-74184756 None:intergenic 35.0%
! AAATTCTGGTGGTTCTGTTA+TGG - chr4_2:74184808-74184827 Msa0621890:intron 35.0%
GAGAAGTAATACTGAATTGG+CGG - chr4_2:74184880-74184899 Msa0621890:CDS 35.0%
CTTAATCAGAGTAAAACTGG+AGG - chr4_2:74185470-74185489 Msa0621890:CDS 35.0%
CATTCCTCGATATAACACTA+GGG + chr4_2:74185522-74185541 None:intergenic 35.0%
ACATTCCTCGATATAACACT+AGG + chr4_2:74185523-74185542 None:intergenic 35.0%
! GAAACCTTGTTTATCCAACA+AGG - chr4_2:74185883-74185902 Msa0621890:intron 35.0%
TTACTATTCTTTACTGCTGC+AGG - chr4_2:74186017-74186036 Msa0621890:intron 35.0%
TAGAGCTATAGTAAAGCTGT+GGG - chr4_2:74186067-74186086 Msa0621890:intron 35.0%
GAGAAATACCTTGAGTTCTT+CGG + chr4_2:74186159-74186178 None:intergenic 35.0%
TCTCATAAACCGCTAGAAAT+TGG - chr4_2:74186175-74186194 Msa0621890:intron 35.0%
TATAAAACAACCCATCTGCT+TGG - chr4_2:74186252-74186271 Msa0621890:intron 35.0%
AGAATATCAGGGATGAGATT+AGG - chr4_2:74186339-74186358 Msa0621890:intron 35.0%
AACATGAGCATATAGGTAGA+TGG - chr4_2:74186402-74186421 Msa0621890:intron 35.0%
GTAAAGTGTATCTGACTATC+TGG - chr4_2:74186454-74186473 Msa0621890:intron 35.0%
CAGAATTCACACACAAACTA+AGG - chr4_2:74186663-74186682 Msa0621890:intron 35.0%
TGAAAGGAGAAAGTGACTAT+AGG + chr4_2:74186777-74186796 None:intergenic 35.0%
! AAGCGAGTTTAAAGCTTTCA+GGG - chr4_2:74186908-74186927 Msa0621890:intron 35.0%
TTCAGGGAATTGCCATAATT+AGG - chr4_2:74186924-74186943 Msa0621890:intron 35.0%
AATCAGATGACCTAAGTCAA+TGG - chr4_2:74187334-74187353 Msa0621890:intron 35.0%
ATGACCTAAGTCAATGGAAT+AGG - chr4_2:74187340-74187359 Msa0621890:intron 35.0%
!! AGTACCTATTCCATTGACTT+AGG + chr4_2:74187347-74187366 None:intergenic 35.0%
TGATTTCACACCAATAAGCA+CGG + chr4_2:74187549-74187568 None:intergenic 35.0%
GTAGAAAATCGCATTATAGG+TGG - chr4_2:74187577-74187596 Msa0621890:intron 35.0%
!! AAGTGATTTGCTGCAATTGA+AGG - chr4_2:74187656-74187675 Msa0621890:CDS 35.0%
! ATAGCTGCAGTCAATCTTTT+GGG + chr4_2:74187779-74187798 None:intergenic 35.0%
! TATAGCTGCAGTCAATCTTT+TGG + chr4_2:74187780-74187799 None:intergenic 35.0%
CACTTGACACTTAAATGCTT+TGG - chr4_2:74187874-74187893 Msa0621890:CDS 35.0%
ATTCACTTCAATATTGCCAC+AGG + chr4_2:74187924-74187943 None:intergenic 35.0%
ATGCATTTGCAGAAATTGAC+TGG - chr4_2:74187983-74188002 Msa0621890:CDS 35.0%
TGCATTTGCAGAAATTGACT+GGG - chr4_2:74187984-74188003 Msa0621890:CDS 35.0%
! TAGTTTTTGTCTCTCAGTCA+GGG + chr4_2:74188089-74188108 None:intergenic 35.0%
!! TTAGTTTTTGTCTCTCAGTC+AGG + chr4_2:74188090-74188109 None:intergenic 35.0%
CAACCAAGTAAACAAGAAGT+TGG - chr4_2:74188250-74188269 Msa0621890:CDS 35.0%
! TTCCCAACTTCTTGTTTACT+TGG + chr4_2:74188256-74188275 None:intergenic 35.0%
! CTTTCGGAAGTTATTTCAGT+TGG + chr4_2:74188364-74188383 None:intergenic 35.0%
GGTAACAACAGATAGTCTTT+CGG + chr4_2:74188380-74188399 None:intergenic 35.0%
TATAGGCAAAAACAAGGTTC+AGG - chr4_2:74188430-74188449 Msa0621890:intron 35.0%
GTTAATGTCTCCAAATCAGT+TGG + chr4_2:74188510-74188529 None:intergenic 35.0%
! GAGATCTTTGTTTAGGAAGA+TGG - chr4_2:74188539-74188558 Msa0621890:intron 35.0%
ATGAAGCCATACTTACTTCT+AGG - chr4_2:74188570-74188589 Msa0621890:intron 35.0%
!!! TAAGCATGAGATTTTCAGGT+AGG - chr4_2:74188662-74188681 Msa0621890:intron 35.0%
! GTGTAGATGCATGTTTTCTA+TGG + chr4_2:74188707-74188726 None:intergenic 35.0%
TAGAAAACATGCATCTACAC+TGG - chr4_2:74188707-74188726 Msa0621890:CDS 35.0%
!!! TTTCTTTTTTGGTAGTGGTC+GGG - chr4_2:74188988-74189007 Msa0621890:CDS 35.0%
CATAAAATATGCAAGGTCCA+GGG + chr4_2:74189021-74189040 None:intergenic 35.0%
TTATTCAGTGGAGTAGAGTT+TGG + chr4_2:74189341-74189360 None:intergenic 35.0%
! GAAACATGGTTGTTATTCAG+TGG + chr4_2:74189353-74189372 None:intergenic 35.0%
TGTAATAAATTGCAAGCACC+TGG + chr4_2:74189426-74189445 None:intergenic 35.0%
! TTTTCCCCCATTATTCTCTT+TGG - chr4_2:74189542-74189561 Msa0621890:intron 35.0%
AGATTTCTATCCAATGTCGT+AGG - chr4_2:74189769-74189788 Msa0621890:five_prime_UTR 35.0%
!! GTTTCTGAAGCAGAGAAACA+CGG - chr4_2:74183950-74183969 Msa0621890:three_prime_UTR 40.0%
TGACACTTAAAAAGGAACGG+AGG - chr4_2:74184306-74184325 Msa0621890:intron 40.0%
GACACTTAAAAAGGAACGGA+GGG - chr4_2:74184307-74184326 Msa0621890:intron 40.0%
!!! GGTTGCAAGAGGCTTTTTTT+TGG + chr4_2:74184360-74184379 None:intergenic 40.0%
GGGAAAAACTGAAAATGCAG+AGG + chr4_2:74184416-74184435 None:intergenic 40.0%
!!! TGGTTTAGGGTTTTGGTTTG+GGG + chr4_2:74184440-74184459 None:intergenic 40.0%
!!! GTGGTTTAGGGTTTTGGTTT+GGG + chr4_2:74184441-74184460 None:intergenic 40.0%
!!! TGTGGTTTAGGGTTTTGGTT+TGG + chr4_2:74184442-74184461 None:intergenic 40.0%
!! TTTCAACTAGAGCCGTTTTG+TGG + chr4_2:74184499-74184518 None:intergenic 40.0%
CGAATTTGGTCAGAGAAACT+TGG + chr4_2:74184542-74184561 None:intergenic 40.0%
GGGACCATTTATGTCGAATT+TGG + chr4_2:74184556-74184575 None:intergenic 40.0%
GTGTTTGGGAAGCTAATTTG+AGG + chr4_2:74184577-74184596 None:intergenic 40.0%
CCCAAACACAAAAATTCCCA+TGG - chr4_2:74184588-74184607 Msa0621890:intron 40.0%
! GCCATGGGAATTTTTGTGTT+TGG + chr4_2:74184592-74184611 None:intergenic 40.0%
! GTTGTTGTTGTTCTTGCCAT+GGG + chr4_2:74184607-74184626 None:intergenic 40.0%
! TGTTGTTGTTGTTCTTGCCA+TGG + chr4_2:74184608-74184627 None:intergenic 40.0%
ACAAGACAAACCAGAACTAG+TGG - chr4_2:74184625-74184644 Msa0621890:CDS 40.0%
! TTCCAAAGCGTTTATCTCCT+TGG - chr4_2:74184696-74184715 Msa0621890:intron 40.0%
GTTGCAGAGACTGAGAAATA+TGG - chr4_2:74184925-74184944 Msa0621890:CDS 40.0%
TGCTGGTATTACTCAGGAAT+TGG - chr4_2:74184982-74185001 Msa0621890:CDS 40.0%
TGGTATTACTCAGGAATTGG+TGG - chr4_2:74184985-74185004 Msa0621890:CDS 40.0%
AAGAGCTCATCAAATTCTCG+AGG - chr4_2:74185084-74185103 Msa0621890:CDS 40.0%
! TTGTGAGGTATGACCCATTT+TGG + chr4_2:74185359-74185378 None:intergenic 40.0%
!! GAGTAAAACTGGAGGTATTG+TGG - chr4_2:74185478-74185497 Msa0621890:CDS 40.0%
AGTTCCCTAGTGTTATATCG+AGG - chr4_2:74185515-74185534 Msa0621890:CDS 40.0%
TTCGTGTAAGATTCTACGCA+AGG + chr4_2:74185557-74185576 None:intergenic 40.0%
TAATGGTAAGGAGAATGCTG+TGG - chr4_2:74185583-74185602 Msa0621890:CDS 40.0%
TGGACAATTCAGTGGATGTT+GGG - chr4_2:74185603-74185622 Msa0621890:CDS 40.0%
! AGACTCTGCAGAGTATTTGA+AGG - chr4_2:74185688-74185707 Msa0621890:CDS 40.0%
CATGAGTGAAGAAGAATCGA+TGG - chr4_2:74185712-74185731 Msa0621890:CDS 40.0%
AACCTTCTGTTGGATGAGTT+GGG - chr4_2:74185749-74185768 Msa0621890:CDS 40.0%
TGATCAGCATCAACAGGTAA+GGG + chr4_2:74185806-74185825 None:intergenic 40.0%
TTGATCAGCATCAACAGGTA+AGG + chr4_2:74185807-74185826 None:intergenic 40.0%
GGTAATTGATCAGCATCAAC+AGG + chr4_2:74185812-74185831 None:intergenic 40.0%
! CTGAATGGTGTTTTATACCC+TGG + chr4_2:74185845-74185864 None:intergenic 40.0%
CATTCAGACTTCTTCCGTAT+GGG - chr4_2:74185858-74185877 Msa0621890:intron 40.0%
ATTCAGACTTCTTCCGTATG+GGG - chr4_2:74185859-74185878 Msa0621890:intron 40.0%
AAACAAGGTTTCACCCCATA+CGG + chr4_2:74185875-74185894 None:intergenic 40.0%
CATGTCAGTCATTTCCTTGT+TGG + chr4_2:74185900-74185919 None:intergenic 40.0%
GGAAGAAGTAGAGAACTTCA+AGG - chr4_2:74186038-74186057 Msa0621890:intron 40.0%
CTAGAGCTATAGTAAAGCTG+TGG - chr4_2:74186066-74186085 Msa0621890:intron 40.0%
GCAAAAATAGCCATCAAACG+TGG - chr4_2:74186104-74186123 Msa0621890:intron 40.0%
! ACTCTTTTAGTCAACAGCCA+AGG + chr4_2:74186284-74186303 None:intergenic 40.0%
TCCAAGAAATTCGAGAGTCT+TGG - chr4_2:74186720-74186739 Msa0621890:intron 40.0%
ACCAAGACTCTCGAATTTCT+TGG + chr4_2:74186724-74186743 None:intergenic 40.0%
ACTTATGTTATGGCCGTTGT+GGG + chr4_2:74186860-74186879 None:intergenic 40.0%
TACTTATGTTATGGCCGTTG+TGG + chr4_2:74186861-74186880 None:intergenic 40.0%
! CAAGCGAGTTTAAAGCTTTC+AGG - chr4_2:74186907-74186926 Msa0621890:intron 40.0%
TCAGTGGCATAGCCTAATTA+TGG + chr4_2:74186939-74186958 None:intergenic 40.0%
! TATGTTTATTCCTTGGCTCG+AGG - chr4_2:74187086-74187105 Msa0621890:intron 40.0%
TAAAATTTCACCTCGAGCCA+AGG + chr4_2:74187099-74187118 None:intergenic 40.0%
!! TTGGCTCGAGGTGAAATTTT+AGG - chr4_2:74187098-74187117 Msa0621890:intron 40.0%
TTTGTTAACCTTCCCTCAAG+TGG - chr4_2:74187227-74187246 Msa0621890:intron 40.0%
TTGTTAACCTTCCCTCAAGT+GGG - chr4_2:74187228-74187247 Msa0621890:intron 40.0%
AACTGATAACACCCACTTGA+GGG + chr4_2:74187242-74187261 None:intergenic 40.0%
ACTTACCATACCGTGCTTAT+TGG - chr4_2:74187536-74187555 Msa0621890:intron 40.0%
CAATTGCAGCAAATCACTTG+TGG + chr4_2:74187655-74187674 None:intergenic 40.0%
TTGAAGGATAAGCCTGAATG+TGG - chr4_2:74187672-74187691 Msa0621890:CDS 40.0%
GCATTTGCAGAAATTGACTG+GGG - chr4_2:74187985-74188004 Msa0621890:CDS 40.0%
CATTTGCAGAAATTGACTGG+GGG - chr4_2:74187986-74188005 Msa0621890:CDS 40.0%
ATGTCTCCAAATCAGTTGGA+AGG + chr4_2:74188506-74188525 None:intergenic 40.0%
! AGCTTTATGCTTAGCTGCTT+TGG - chr4_2:74188614-74188633 Msa0621890:intron 40.0%
! ATATCTTTGGAAGCTGAGAG+TGG - chr4_2:74188796-74188815 Msa0621890:CDS 40.0%
ATCTGTAGACAAGGATACCA+AGG - chr4_2:74188831-74188850 Msa0621890:CDS 40.0%
TCTGTAGACAAGGATACCAA+GGG - chr4_2:74188832-74188851 Msa0621890:CDS 40.0%
! CTTCGTGACAACAAGCTTTT+GGG + chr4_2:74188913-74188932 None:intergenic 40.0%
! TCTTCGTGACAACAAGCTTT+TGG + chr4_2:74188914-74188933 None:intergenic 40.0%
TATTGAGCTTCAAAGACGAG+AGG - chr4_2:74188951-74188970 Msa0621890:CDS 40.0%
!!! TTCTTTTTTGGTAGTGGTCG+GGG - chr4_2:74188989-74189008 Msa0621890:CDS 40.0%
GCATAAAATATGCAAGGTCC+AGG + chr4_2:74189022-74189041 None:intergenic 40.0%
TGTCATCATGGGAAGAAACA+TGG + chr4_2:74189367-74189386 None:intergenic 40.0%
GAGGTCTTTCATGTCATCAT+GGG + chr4_2:74189378-74189397 None:intergenic 40.0%
!! CATTTTGATAAAGACGACGG+TGG - chr4_2:74189591-74189610 Msa0621890:intron 40.0%
!!! TTAGGGTTTTGGTTTGGGGT+GGG + chr4_2:74184436-74184455 None:intergenic 45.0%
!!! TTTAGGGTTTTGGTTTGGGG+TGG + chr4_2:74184437-74184456 None:intergenic 45.0%
!! AGCCGTTTTGTGGTTGGAAT+TGG + chr4_2:74184489-74184508 None:intergenic 45.0%
!! AACTAGAGCCGTTTTGTGGT+TGG + chr4_2:74184495-74184514 None:intergenic 45.0%
TGTGGTTGTTCCACTAGTTC+TGG + chr4_2:74184638-74184657 None:intergenic 45.0%
TGCCAAGGAGATAAACGCTT+TGG + chr4_2:74184701-74184720 None:intergenic 45.0%
AAACGGGTACAGCGAAATTC+TGG - chr4_2:74184794-74184813 Msa0621890:intron 45.0%
! ATTGGCGGAGAAGTTGATTC+CGG - chr4_2:74184895-74184914 Msa0621890:CDS 45.0%
AGTCTCTGCAACTCATGTTC+CGG + chr4_2:74184917-74184936 None:intergenic 45.0%
GACTGAGAAATATGGCGTTG+AGG - chr4_2:74184933-74184952 Msa0621890:CDS 45.0%
! GAGAAATATGGCGTTGAGGA+TGG - chr4_2:74184937-74184956 Msa0621890:CDS 45.0%
! AAATATGGCGTTGAGGATGG+TGG - chr4_2:74184940-74184959 Msa0621890:CDS 45.0%
TGGAGTTGCTGGTATTACTC+AGG - chr4_2:74184976-74184995 Msa0621890:CDS 45.0%
TCATACCTCACAATGCAGTG+TGG - chr4_2:74185366-74185385 Msa0621890:intron 45.0%
!! AAACTGGAGGTATTGTGGTG+TGG - chr4_2:74185483-74185502 Msa0621890:CDS 45.0%
GAATGCTGTGGACAATTCAG+TGG - chr4_2:74185595-74185614 Msa0621890:CDS 45.0%
GTGGACAATTCAGTGGATGT+TGG - chr4_2:74185602-74185621 Msa0621890:CDS 45.0%
AATTCAGTGGATGTTGGGAG+TGG - chr4_2:74185608-74185627 Msa0621890:CDS 45.0%
ATTCAGTGGATGTTGGGAGT+GGG - chr4_2:74185609-74185628 Msa0621890:CDS 45.0%
GATCGAACTCAACCTTCTGT+TGG - chr4_2:74185739-74185758 Msa0621890:CDS 45.0%
CAACCTTCTGTTGGATGAGT+TGG - chr4_2:74185748-74185767 Msa0621890:CDS 45.0%
TGCTGATCAATTACCTGCTG+TGG - chr4_2:74185817-74185836 Msa0621890:intron 45.0%
AATTACCTGCTGTGGTTCCA+GGG - chr4_2:74185825-74185844 Msa0621890:intron 45.0%
CCATACGGAAGAAGTCTGAA+TGG + chr4_2:74185860-74185879 None:intergenic 45.0%
CCATTCAGACTTCTTCCGTA+TGG - chr4_2:74185857-74185876 Msa0621890:intron 45.0%
AGGAAATGACTGACATGCGT+AGG - chr4_2:74185903-74185922 Msa0621890:intron 45.0%
GCGTAGGATTGCTAGAAGAA+CGG - chr4_2:74185919-74185938 Msa0621890:intron 45.0%
GAGAGCTTCTTGCATACCAA+GGG + chr4_2:74185957-74185976 None:intergenic 45.0%
AGAGAGCTTCTTGCATACCA+AGG + chr4_2:74185958-74185977 None:intergenic 45.0%
ATAGGGAACTCCACGTTTGA+TGG + chr4_2:74186117-74186136 None:intergenic 45.0%
! CTTTTAGTCAACAGCCAAGG+AGG + chr4_2:74186281-74186300 None:intergenic 45.0%
TACCTAAAACCTGCCCACAA+CGG - chr4_2:74186844-74186863 Msa0621890:intron 45.0%
CAACTGATAACACCCACTTG+AGG + chr4_2:74187243-74187262 None:intergenic 45.0%
CAGAATGTGTGTGACTTTCG+TGG - chr4_2:74187375-74187394 Msa0621890:intron 45.0%
AGCACGGTATGGTAAGTTCA+AGG + chr4_2:74187533-74187552 None:intergenic 45.0%
TCACACCAATAAGCACGGTA+TGG + chr4_2:74187544-74187563 None:intergenic 45.0%
TTCATGGGAGTGAGTTGCTA+TGG - chr4_2:74187623-74187642 Msa0621890:intron 45.0%
TGCATGCAAGAACCACATTC+AGG + chr4_2:74187687-74187706 None:intergenic 45.0%
! TTGTCTCTCAGTCAGGGTTT+TGG + chr4_2:74188083-74188102 None:intergenic 45.0%
AACTGTTCTCCAACAAGACG+AGG - chr4_2:74188108-74188127 Msa0621890:CDS 45.0%
CTTTCTCTTCCTCGTCTTGT+TGG + chr4_2:74188120-74188139 None:intergenic 45.0%
TCTCAAATGCCGTTACTTGC+TGG - chr4_2:74188184-74188203 Msa0621890:CDS 45.0%
! ACTTGGTTGATGTCCCCAAT+TGG + chr4_2:74188239-74188258 None:intergenic 45.0%
AAGGTTCAGGAAGTCTGAGA+AGG - chr4_2:74188443-74188462 Msa0621890:intron 45.0%
AATCAGTTGGAAGGTCTGCT+GGG + chr4_2:74188497-74188516 None:intergenic 45.0%
AAATCAGTTGGAAGGTCTGC+TGG + chr4_2:74188498-74188517 None:intergenic 45.0%
AGCAGACCTTCCAACTGATT+TGG - chr4_2:74188497-74188516 Msa0621890:intron 45.0%
!!! GCATGAGATTTTCAGGTAGG+CGG - chr4_2:74188665-74188684 Msa0621890:intron 45.0%
!!! CATGAGATTTTCAGGTAGGC+GGG - chr4_2:74188666-74188685 Msa0621890:intron 45.0%
ACACTGGAAATATCGCGAGT+TGG - chr4_2:74188723-74188742 Msa0621890:CDS 45.0%
GGTGCTAGTATCTGTAGACA+AGG - chr4_2:74188822-74188841 Msa0621890:CDS 45.0%
!! AAGCTTGTTGTCACGAAGAC+AGG - chr4_2:74188915-74188934 Msa0621890:CDS 45.0%
TGAGCTTAGCTCAGTTGGTT+GGG + chr4_2:74189050-74189069 None:intergenic 45.0%
CGAGGTCTTTCATGTCATCA+TGG + chr4_2:74189379-74189398 None:intergenic 45.0%
ATGCGACACATCAAAAGGCA+TGG + chr4_2:74189720-74189739 None:intergenic 45.0%
! ATGCCTTTTGATGTGTCGCA+TGG - chr4_2:74189719-74189738 Msa0621890:intron 45.0%
GTTCCATGCGACACATCAAA+AGG + chr4_2:74189725-74189744 None:intergenic 45.0%
! TTGGGGTATTCCTACGACAT+TGG + chr4_2:74189782-74189801 None:intergenic 45.0%
!! ATTTATGTAAATATTTATTT+CGG - chr4_2:74189826-74189845 Msa0621890:five_prime_UTR 5.0%
CTGAAGCAGAGAAACACGGA+AGG - chr4_2:74183954-74183973 Msa0621890:three_prime_UTR 50.0%
GGAACAACCACAATCCCAAG+AGG - chr4_2:74184646-74184665 Msa0621890:intron 50.0%
AGGTTGTGGGTGTTCCTCTT+GGG + chr4_2:74184663-74184682 None:intergenic 50.0%
! ATGGTGGAGAGGTTCAGTGT+TGG - chr4_2:74184956-74184975 Msa0621890:CDS 50.0%
! AGGTTCAGTGTTGGAGTTGC+TGG - chr4_2:74184965-74184984 Msa0621890:CDS 50.0%
AGCAACCACACTGCATTGTG+AGG + chr4_2:74185374-74185393 None:intergenic 50.0%
! AGGTATTGTGGTGTGGCGAT+CGG - chr4_2:74185490-74185509 Msa0621890:CDS 50.0%
TTCTACGCAAGGCAGCTTGT+AGG + chr4_2:74185546-74185565 None:intergenic 50.0%
GACCCAACTCATCCAACAGA+AGG + chr4_2:74185754-74185773 None:intergenic 50.0%
!! CCTGTCCAATCTTTGAAGCG+CGG + chr4_2:74185776-74185795 None:intergenic 50.0%
CAATTACCTGCTGTGGTTCC+AGG - chr4_2:74185824-74185843 Msa0621890:intron 50.0%
TTATACCCTGGAACCACAGC+AGG + chr4_2:74185833-74185852 None:intergenic 50.0%
TGCATACCAAGGGCAAAGTG+TGG + chr4_2:74185947-74185966 None:intergenic 50.0%
TAGGATGGCCGAAGAACTCA+AGG - chr4_2:74186148-74186167 Msa0621890:intron 50.0%
GCAGTCAACTTACCTGTGCT+TGG + chr4_2:74186984-74187003 None:intergenic 50.0%
GATAACACCCACTTGAGGGA+AGG + chr4_2:74187238-74187257 None:intergenic 50.0%
GCAAGGGTTCCAGCAAGTAA+CGG + chr4_2:74188196-74188215 None:intergenic 50.0%
TGGAACCCTTGCTGAGACTA+GGG - chr4_2:74188204-74188223 Msa0621890:CDS 50.0%
! TGGTTGATGTCCCCAATTGG+CGG + chr4_2:74188236-74188255 None:intergenic 50.0%
! TCTTTGGAAGCTGAGAGTGG+TGG - chr4_2:74188799-74188818 Msa0621890:CDS 50.0%
! CTTTGGAAGCTGAGAGTGGT+GGG - chr4_2:74188800-74188819 Msa0621890:CDS 50.0%
TTTGGAAGCTGAGAGTGGTG+GGG - chr4_2:74188801-74188820 Msa0621890:CDS 50.0%
GAAGAACTACTTCCGTCCAC+AGG - chr4_2:74188879-74188898 Msa0621890:CDS 50.0%
GTTGTCACGAAGACAGGCAT+TGG - chr4_2:74188921-74188940 Msa0621890:CDS 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG + chr4_2:74189051-74189070 None:intergenic 50.0%
GGGTGTTCCTCTTGGGATTG+TGG + chr4_2:74184656-74184675 None:intergenic 55.0%
GAGGTTGTGGGTGTTCCTCT+TGG + chr4_2:74184664-74184683 None:intergenic 55.0%
GCGTTTATCTCCTTGGCACG+TGG - chr4_2:74184703-74184722 Msa0621890:intron 55.0%
CGGGTACAGCGAAATTCTGG+TGG - chr4_2:74184797-74184816 Msa0621890:intron 55.0%
GGTATTGTGGTGTGGCGATC+GGG - chr4_2:74185491-74185510 Msa0621890:CDS 55.0%
TGGGTCCGCGCTTCAAAGAT+TGG - chr4_2:74185768-74185787 Msa0621890:CDS 55.0%
CCGCGCTTCAAAGATTGGAC+AGG - chr4_2:74185773-74185792 Msa0621890:CDS 55.0%
AAGGAGGTCGCCAAGCAGAT+GGG + chr4_2:74186265-74186284 None:intergenic 55.0%
ATGTTATGGCCGTTGTGGGC+AGG + chr4_2:74186856-74186875 None:intergenic 55.0%
!! CGTGGCGTCTGCCTTTGTTT+TGG - chr4_2:74187393-74187412 Msa0621890:intron 55.0%
!! AGGGTTTTGGTGACAGCAGG+AGG + chr4_2:74188070-74188089 None:intergenic 55.0%
!! GTCAGGGTTTTGGTGACAGC+AGG + chr4_2:74188073-74188092 None:intergenic 55.0%
CTGGAACCCTTGCTGAGACT+AGG - chr4_2:74188203-74188222 Msa0621890:CDS 55.0%
TGCTGCCCTAGTCTCAGCAA+GGG + chr4_2:74188212-74188231 None:intergenic 55.0%
TTGCTGCCCTAGTCTCAGCA+AGG + chr4_2:74188213-74188232 None:intergenic 55.0%
TAGGGCAGCAACCGCCAATT+GGG - chr4_2:74188222-74188241 Msa0621890:CDS 55.0%
GGTAGGCGGGATGTTTATGC+TGG - chr4_2:74188679-74188698 Msa0621890:intron 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr4_2:74189055-74189074 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr4_2:74189052-74189071 Msa0621890:CDS 55.0%
! GGGTTTTCTGCCACGTGCCA+AGG + chr4_2:74184716-74184735 None:intergenic 60.0%
!! TGGCGTTGAGGATGGTGGAG+AGG - chr4_2:74184945-74184964 Msa0621890:CDS 60.0%
CAAGGAGGTCGCCAAGCAGA+TGG + chr4_2:74186266-74186285 None:intergenic 60.0%
CATCTGCTTGGCGACCTCCT+TGG - chr4_2:74186264-74186283 Msa0621890:intron 60.0%
! GGCCGTTGTGGGCAGGTTTT+AGG + chr4_2:74186849-74186868 None:intergenic 60.0%
CTAGGGCAGCAACCGCCAAT+TGG - chr4_2:74188221-74188240 Msa0621890:CDS 60.0%
AGGGCAGCAACCGCCAATTG+GGG - chr4_2:74188223-74188242 Msa0621890:CDS 60.0%
AGTGGTCGGGGTTTGAACCC+TGG - chr4_2:74189001-74189020 Msa0621890:CDS 60.0%
ACGGCGCCACACTTTGCCCT+TGG - chr4_2:74185938-74185957 Msa0621890:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 74183905 74189907 74183905 ID=Msa0621890;Name=Msa0621890
chr4_2 mRNA 74183905 74189907 74183905 ID=Msa0621890-mRNA-1;Parent=Msa0621890;Name=Msa0621890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=207|1|1|1|0.77|0.6|10|404|746
chr4_2 exon 74183905 74184238 74183905 ID=Msa0621890-mRNA-1:exon:22364;Parent=Msa0621890-mRNA-1
chr4_2 exon 74184386 74184509 74184386 ID=Msa0621890-mRNA-1:exon:22363;Parent=Msa0621890-mRNA-1
chr4_2 exon 74184601 74184660 74184601 ID=Msa0621890-mRNA-1:exon:22362;Parent=Msa0621890-mRNA-1
chr4_2 exon 74184840 74185132 74184840 ID=Msa0621890-mRNA-1:exon:22361;Parent=Msa0621890-mRNA-1
chr4_2 exon 74185221 74185377 74185221 ID=Msa0621890-mRNA-1:exon:22360;Parent=Msa0621890-mRNA-1
chr4_2 exon 74185467 74185817 74185467 ID=Msa0621890-mRNA-1:exon:22359;Parent=Msa0621890-mRNA-1
chr4_2 exon 74187643 74187773 74187643 ID=Msa0621890-mRNA-1:exon:22358;Parent=Msa0621890-mRNA-1
chr4_2 exon 74187853 74188333 74187853 ID=Msa0621890-mRNA-1:exon:22357;Parent=Msa0621890-mRNA-1
chr4_2 exon 74188707 74189480 74188707 ID=Msa0621890-mRNA-1:exon:22356;Parent=Msa0621890-mRNA-1
chr4_2 exon 74189761 74189907 74189761 ID=Msa0621890-mRNA-1:exon:22355;Parent=Msa0621890-mRNA-1
chr4_2 five_prime_UTR 74189761 74189907 74189761 ID=Msa0621890-mRNA-1:five_prime_utr;Parent=Msa0621890-mRNA-1
chr4_2 five_prime_UTR 74189421 74189480 74189421 ID=Msa0621890-mRNA-1:five_prime_utr;Parent=Msa0621890-mRNA-1
chr4_2 CDS 74188707 74189420 74188707 ID=Msa0621890-mRNA-1:cds;Parent=Msa0621890-mRNA-1
chr4_2 CDS 74187853 74188333 74187853 ID=Msa0621890-mRNA-1:cds;Parent=Msa0621890-mRNA-1
chr4_2 CDS 74187643 74187773 74187643 ID=Msa0621890-mRNA-1:cds;Parent=Msa0621890-mRNA-1
chr4_2 CDS 74185467 74185817 74185467 ID=Msa0621890-mRNA-1:cds;Parent=Msa0621890-mRNA-1
chr4_2 CDS 74185221 74185377 74185221 ID=Msa0621890-mRNA-1:cds;Parent=Msa0621890-mRNA-1
chr4_2 CDS 74184840 74185132 74184840 ID=Msa0621890-mRNA-1:cds;Parent=Msa0621890-mRNA-1
chr4_2 CDS 74184601 74184660 74184601 ID=Msa0621890-mRNA-1:cds;Parent=Msa0621890-mRNA-1
chr4_2 CDS 74184456 74184509 74184456 ID=Msa0621890-mRNA-1:cds;Parent=Msa0621890-mRNA-1
chr4_2 three_prime_UTR 74184386 74184455 74184386 ID=Msa0621890-mRNA-1:three_prime_utr;Parent=Msa0621890-mRNA-1
chr4_2 three_prime_UTR 74183905 74184238 74183905 ID=Msa0621890-mRNA-1:three_prime_utr;Parent=Msa0621890-mRNA-1
Gene Sequence

>Msa0621890

ATGGCGCTACAACAAATCTCTCCTCTGCATTTTCAGTTTTTCCCACCCCAAACCAAAACCCTAAACCACATTTTCAAATTCGCACTTTCTTGTTCCAATTCCAACCACAAAACGGCTCTAGTTGAAATTAAGAAGAAAAAACACAGACCAAGTTTCTCTGACCAAATTCGACATAAATGGTCCCTCAAATTAGCTTCCCAAACACAAAAATTCCCATGGCAAGAACAACAACAACAAGACAAACCAGAACTAGTGGAACAACCACAATCCCAAGAGGAACACCCACAACCTCTTAATTTTGAGTTTCCAAAGCGTTTATCTCCTTGGCACGTGGCAGAAAACCCTAAACAACACCCACAAAATGATTCAGAATCTGATGCTTCTGAAGACAAAGATAATGTGAAACGGGTACAGCGAAATTCTGGTGGTTCTGTTATGGAAAGAGAGTTTGAAGAATCAGAAAGTAGTATTAGTAGTTTGAAGAAAAGGAGAAGTAATACTGAATTGGCGGAGAAGTTGATTCCGGAACATGAGTTGCAGAGACTGAGAAATATGGCGTTGAGGATGGTGGAGAGGTTCAGTGTTGGAGTTGCTGGTATTACTCAGGAATTGGTGGATGCTATTCATGAAAAATGGATGGTTGATGAAGTTGTTAAGTTTAAGTTTGATTCTCCTCTTTCTGCTAATATGAAAAGAGCTCATCAAATTCTCGAGAGTAAAACTGGAGGTATTGTGGTGTGGCGATCGGGAAGTTCCCTAGTGTTATATCGAGGAATGTCCTACAAGCTGCCTTGCGTAGAATCTTACACGAAAGTATATAATGGTAAGGAGAATGCTGTGGACAATTCAGTGGATGTTGGGAGTGGGAGAAGTGCTGAAATAAGTGTGAAAGAAATGGTTGGACCTATTGAATCTTTTAATCGAGACTCTGCAGAGTATTTGAAGGACATGAGTGAAGAAGAATCGATGGAATTGATCGAACTCAACCTTCTGTTGGATGAGTTGGGTCCGCGCTTCAAAGATTGGACAGGACGTGAGCCCTTACCTGTTGATGCTGATCAATTACCTGCTGTGGTTCCAGGGTATAAAACACCATTCAGACTTCTTCCGTATGGGGTGAAACCTTGTTTATCCAACAAGGAAATGACTGACATGCGTAGGATTGCTAGAAGAACGGCGCCACACTTTGCCCTTGGAAGAAGTAGAGAACTTCAAGGTCTAGCTAGAGCTATAGTAAAGCTGTGGGAAACAAGCGCTATTGCAAAAATAGCCATCAAACGTGGAGTTCCCTATACATCTAATGATAGGATGGCCGAAGAACTCAAGAAATTGACTGGGGGAACCTTACTTTCTAGAAATAAGGAATATATTGTAATTTACAGGGGAAATGACTTCTTGCCTCCTGCTGTCACCAAAACCCTGACTGAGAGACAAAAACTAACTGTTCTCCAACAAGACGAGGAAGAGAAAGCACGTCAAAATGCTTCATCGATTACTTTATCAAATAGCAAATCATCTCAAATGCCGTTACTTGCTGGAACCCTTGCTGAGACTAGGGCAGCAACCGCCAATTGGGGACATCAACCAAGTAAACAAGAAGTTGGGAAAATGATGAGAGAATCTACTTTGGATAGACTTTCTTCTTTAATCAGAAATCATGAGAGTAAACTAGCTCTAGCAAAAACAAGGTTCAGGAAGTCTGAGAAGGATTTAGCTAAAATACAGGGTGATTTTGACCCAGCAGACCTTCCAACTGATTTGGAGACATTAACTAATGAAGAGAGATCTTTGTTTAGGAAGATGGGTCTGAGTATGAAGCCATACTTACTTCTAGGTAGGCGGGATGTTTATGCTGGCACCATAGAAAACATGCATCTACACTGGAAATATCGCGAGTTGGTAAAAATACTTGTGAAAGGGAAAAATTTAGCCCAAGTTAAGCATATTGCGATATCTTTGGAAGCTGAGAGTGGTGGGGTGCTAGTATCTGTAGACAAGGATACCAAGGGCCATATAATAATTATTTATCGTGGGAAGAACTACTTCCGTCCACAGGTTATGAGACCCAAAAGCTTGTTGTCACGAAGACAGGCATTGGCTCGATCTATTGAGCTTCAAAGACGAGAGGCACTAAAACACCATATATCAGATTTACAGGAGATGATTGAGTTGCTCAAATCTGAGCTAGAGGATATGAAAAATCAAAGGGTGATTGATGGTGACCAAACTCTACTCCACTGA

Protein sequence

>Msa0621890

MALQQISPLHFQFFPPQTKTLNHIFKFALSCSNSNHKTALVEIKKKKHRPSFSDQIRHKWSLKLASQTQKFPWQEQQQQDKPELVEQPQSQEEHPQPLNFEFPKRLSPWHVAENPKQHPQNDSESDASEDKDNVKRVQRNSGGSVMEREFEESESSISSLKKRRSNTELAEKLIPEHELQRLRNMALRMVERFSVGVAGITQELVDAIHEKWMVDEVVKFKFDSPLSANMKRAHQILESKTGGIVVWRSGSSLVLYRGMSYKLPCVESYTKVYNGKENAVDNSVDVGSGRSAEISVKEMVGPIESFNRDSAEYLKDMSEEESMELIELNLLLDELGPRFKDWTGREPLPVDADQLPAVVPGYKTPFRLLPYGVKPCLSNKEMTDMRRIARRTAPHFALGRSRELQGLARAIVKLWETSAIAKIAIKRGVPYTSNDRMAEELKKLTGGTLLSRNKEYIVIYRGNDFLPPAVTKTLTERQKLTVLQQDEEEKARQNASSITLSNSKSSQMPLLAGTLAETRAATANWGHQPSKQEVGKMMRESTLDRLSSLIRNHESKLALAKTRFRKSEKDLAKIQGDFDPADLPTDLETLTNEERSLFRKMGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKILVKGKNLAQVKHIAISLEAESGGVLVSVDKDTKGHIIIIYRGKNYFRPQVMRPKSLLSRRQALARSIELQRREALKHHISDLQEMIELLKSELEDMKNQRVIDGDQTLLH*