Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791070 | XP_003594074.1 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 684 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791070 | sp|Q9Y376|CAB39_HUMAN | 47.006 | 334 | 173 | 3 | 1 | 334 | 1 | 330 | 2.01e-93 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791070 | B7FJS9 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 684 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011720 | Msa0791070 | 0.838817 | 2.295419e-57 | -8.615850e-47 |
| Msa0027540 | Msa0791070 | 0.800881 | 1.170427e-48 | -8.615850e-47 |
| Msa0030000 | Msa0791070 | 0.811721 | 6.074945e-51 | -8.615850e-47 |
| Msa0038350 | Msa0791070 | -0.809673 | 1.684243e-50 | -8.615850e-47 |
| Msa0050760 | Msa0791070 | 0.802741 | 4.857460e-49 | -8.615850e-47 |
| Msa0071240 | Msa0791070 | 0.807677 | 4.497136e-50 | -8.615850e-47 |
| Msa0075310 | Msa0791070 | 0.802701 | 4.951432e-49 | -8.615850e-47 |
| Msa0091770 | Msa0791070 | 0.828568 | 8.364596e-55 | -8.615850e-47 |
| Msa0101060 | Msa0791070 | 0.807999 | 3.841981e-50 | -8.615850e-47 |
| Msa0102750 | Msa0791070 | 0.826242 | 3.021325e-54 | -8.615850e-47 |
| Msa0105340 | Msa0791070 | 0.811167 | 8.014468e-51 | -8.615850e-47 |
| Msa0105420 | Msa0791070 | 0.846653 | 1.897903e-59 | -8.615850e-47 |
| Msa0115810 | Msa0791070 | 0.810891 | 9.200545e-51 | -8.615850e-47 |
| Msa0606060 | Msa0791070 | 0.801126 | 1.043101e-48 | -8.615850e-47 |
| Msa0610590 | Msa0791070 | 0.813172 | 2.927892e-51 | -8.615850e-47 |
| Msa0620640 | Msa0791070 | 0.801180 | 1.016690e-48 | -8.615850e-47 |
| Msa0621590 | Msa0791070 | 0.920987 | 6.371885e-88 | -8.615850e-47 |
| Msa0621890 | Msa0791070 | 0.824181 | 9.278644e-54 | -8.615850e-47 |
| Msa0624730 | Msa0791070 | 0.848714 | 5.139736e-60 | -8.615850e-47 |
| Msa0626230 | Msa0791070 | 0.805253 | 1.459726e-49 | -8.615850e-47 |
| Msa0638280 | Msa0791070 | 0.816563 | 5.185566e-52 | -8.615850e-47 |
| Msa0638320 | Msa0791070 | 0.829811 | 4.178160e-55 | -8.615850e-47 |
| Msa0647000 | Msa0791070 | 0.831165 | 1.948513e-55 | -8.615850e-47 |
| Msa0651190 | Msa0791070 | 0.816864 | 4.439431e-52 | -8.615850e-47 |
| Msa0656270 | Msa0791070 | 0.802974 | 4.348697e-49 | -8.615850e-47 |
| Msa0657670 | Msa0791070 | 0.828112 | 1.077477e-54 | -8.615850e-47 |
| Msa0658570 | Msa0791070 | 0.802928 | 4.445466e-49 | -8.615850e-47 |
| Msa0660880 | Msa0791070 | -0.809595 | 1.750586e-50 | -8.615850e-47 |
| Msa0662650 | Msa0791070 | 0.806493 | 8.008030e-50 | -8.615850e-47 |
| Msa0674220 | Msa0791070 | 0.831350 | 1.754697e-55 | -8.615850e-47 |
| Msa0674300 | Msa0791070 | 0.808944 | 2.414320e-50 | -8.615850e-47 |
| Msa0677270 | Msa0791070 | 0.834526 | 2.847736e-56 | -8.615850e-47 |
| Msa0677400 | Msa0791070 | 0.807119 | 5.907023e-50 | -8.615850e-47 |
| Msa0686610 | Msa0791070 | 0.803893 | 2.805337e-49 | -8.615850e-47 |
| Msa0692230 | Msa0791070 | 0.801977 | 6.979455e-49 | -8.615850e-47 |
| Msa0697140 | Msa0791070 | 0.831330 | 1.774598e-55 | -8.615850e-47 |
| Msa0700070 | Msa0791070 | 0.805936 | 1.049086e-49 | -8.615850e-47 |
| Msa0703490 | Msa0791070 | 0.801028 | 1.092037e-48 | -8.615850e-47 |
| Msa0706370 | Msa0791070 | 0.814248 | 1.696781e-51 | -8.615850e-47 |
| Msa0708860 | Msa0791070 | 0.802539 | 5.348635e-49 | -8.615850e-47 |
| Msa0722930 | Msa0791070 | 0.847860 | 8.850520e-60 | -8.615850e-47 |
| Msa0723140 | Msa0791070 | 0.850212 | 1.965537e-60 | -8.615850e-47 |
| Msa0743200 | Msa0791070 | 0.806527 | 7.878274e-50 | -8.615850e-47 |
| Msa0754860 | Msa0791070 | 0.806258 | 8.975029e-50 | -8.615850e-47 |
| Msa0789270 | Msa0791070 | 0.810979 | 8.806208e-51 | -8.615850e-47 |
| Msa0789280 | Msa0791070 | 0.806622 | 7.522097e-50 | -8.615850e-47 |
| Msa0789290 | Msa0791070 | 0.809389 | 1.938379e-50 | -8.615850e-47 |
| Msa0789300 | Msa0791070 | 0.805290 | 1.434000e-49 | -8.615850e-47 |
| Msa0791070 | Msa0792510 | 0.806553 | 7.778768e-50 | -8.615850e-47 |
| Msa0791070 | Msa0796590 | 0.810710 | 1.006921e-50 | -8.615850e-47 |
| Msa0791070 | Msa0833940 | 0.803606 | 3.217359e-49 | -8.615850e-47 |
| Msa0791070 | Msa0834130 | 0.808639 | 2.805513e-50 | -8.615850e-47 |
| Msa0791070 | Msa0837990 | 0.814539 | 1.463425e-51 | -8.615850e-47 |
| Msa0791070 | Msa0839330 | 0.801192 | 1.010946e-48 | -8.615850e-47 |
| Msa0791070 | Msa0843280 | 0.866680 | 2.388454e-65 | -8.615850e-47 |
| Msa0791070 | Msa0847200 | 0.804205 | 2.416063e-49 | -8.615850e-47 |
| Msa0791070 | Msa0891040 | 0.811126 | 8.181271e-51 | -8.615850e-47 |
| Msa0791070 | Msa0896210 | 0.818744 | 1.670634e-52 | -8.615850e-47 |
| Msa0791070 | Msa0907700 | 0.817497 | 3.197664e-52 | -8.615850e-47 |
| Msa0791070 | Msa0908170 | 0.818435 | 1.963208e-52 | -8.615850e-47 |
| Msa0791070 | Msa0910980 | -0.815904 | 7.279133e-52 | -8.615850e-47 |
| Msa0791070 | Msa0944770 | 0.804742 | 1.866710e-49 | -8.615850e-47 |
| Msa0791070 | Msa0946120 | 0.831215 | 1.894368e-55 | -8.615850e-47 |
| Msa0791070 | Msa0951720 | 0.812473 | 4.165813e-51 | -8.615850e-47 |
| Msa0791070 | Msa0961420 | -0.826413 | 2.750497e-54 | -8.615850e-47 |
| Msa0791070 | Msa0965520 | 0.826883 | 2.124803e-54 | -8.615850e-47 |
| Msa0791070 | Msa0980440 | 0.818119 | 2.315206e-52 | -8.615850e-47 |
| Msa0791070 | Msa0988500 | 0.816455 | 5.480480e-52 | -8.615850e-47 |
| Msa0791070 | Msa1000020 | 0.808294 | 3.323552e-50 | -8.615850e-47 |
| Msa0791070 | Msa1008490 | 0.827333 | 1.657355e-54 | -8.615850e-47 |
| Msa0791070 | Msa1009000 | 0.821416 | 4.084710e-53 | -8.615850e-47 |
| Msa0791070 | Msa1020710 | 0.803247 | 3.817969e-49 | -8.615850e-47 |
| Msa0791070 | Msa1036390 | 0.832703 | 8.125103e-56 | -8.615850e-47 |
| Msa0791070 | Msa1037700 | -0.800405 | 1.463658e-48 | -8.615850e-47 |
| Msa0791070 | Msa1038050 | 0.808896 | 2.471891e-50 | -8.615850e-47 |
| Msa0791070 | Msa1038480 | 0.801251 | 9.832033e-49 | -8.615850e-47 |
| Msa0791070 | Msa1040830 | 0.800837 | 1.194939e-48 | -8.615850e-47 |
| Msa0791070 | Msa1056640 | 0.810837 | 9.449858e-51 | -8.615850e-47 |
| Msa0791070 | Msa1068200 | -0.802333 | 5.895807e-49 | -8.615850e-47 |
| Msa0791070 | Msa1069300 | 0.814872 | 1.234587e-51 | -8.615850e-47 |
| Msa0791070 | Msa1072350 | 0.822484 | 2.311826e-53 | -8.615850e-47 |
| Msa0791070 | Msa1075220 | -0.808558 | 2.920412e-50 | -8.615850e-47 |
| Msa0791070 | Msa1076680 | 0.819969 | 8.784629e-53 | -8.615850e-47 |
| Msa0791070 | Msa1087470 | 0.823857 | 1.104852e-53 | -8.615850e-47 |
| Msa0791070 | Msa1089530 | 0.803400 | 3.549309e-49 | -8.615850e-47 |
| Msa0791070 | Msa1098560 | 0.837810 | 4.173579e-57 | -8.615850e-47 |
| Msa0791070 | Msa1113200 | 0.831767 | 1.385065e-55 | -8.615850e-47 |
| Msa0791070 | Msa1116130 | -0.821857 | 3.229775e-53 | -8.615850e-47 |
| Msa0791070 | Msa1118140 | 0.800924 | 1.146939e-48 | -8.615850e-47 |
| Msa0791070 | Msa1139000 | -0.800460 | 1.426104e-48 | -8.615850e-47 |
| Msa0791070 | Msa1140010 | 0.809959 | 1.462007e-50 | -8.615850e-47 |
| Msa0791070 | Msa1142850 | -0.800032 | 1.743170e-48 | -8.615850e-47 |
| Msa0791070 | Msa1147570 | 0.801389 | 9.215248e-49 | -8.615850e-47 |
| Msa0791070 | Msa1159360 | 0.806217 | 9.156134e-50 | -8.615850e-47 |
| Msa0791070 | Msa1162550 | -0.806084 | 9.767127e-50 | -8.615850e-47 |
| Msa0791070 | Msa1171690 | 0.800914 | 1.152395e-48 | -8.615850e-47 |
| Msa0791070 | Msa1188420 | 0.820607 | 6.273235e-53 | -8.615850e-47 |
| Msa0791070 | Msa1199560 | 0.825954 | 3.535690e-54 | -8.615850e-47 |
| Msa0791070 | Msa1204120 | 0.804957 | 1.682999e-49 | -8.615850e-47 |
| Msa0791070 | Msa1204980 | -0.816252 | 6.087523e-52 | -8.615850e-47 |
| Msa0791070 | Msa1205010 | -0.823718 | 1.191405e-53 | -8.615850e-47 |
| Msa0791070 | Msa1205130 | 0.800676 | 1.289146e-48 | -8.615850e-47 |
| Msa0791070 | Msa1211110 | 0.805548 | 1.265951e-49 | -8.615850e-47 |
| Msa0791070 | Msa1217810 | 0.804972 | 1.671452e-49 | -8.615850e-47 |
| Msa0791070 | Msa1220230 | 0.825116 | 5.584502e-54 | -8.615850e-47 |
| Msa0791070 | Msa1221200 | -0.819005 | 1.457620e-52 | -8.615850e-47 |
| Msa0791070 | Msa1228210 | 0.801511 | 8.699204e-49 | -8.615850e-47 |
| Msa0791070 | Msa1233500 | 0.815797 | 7.689602e-52 | -8.615850e-47 |
| Msa0791070 | Msa1242390 | 0.808910 | 2.454993e-50 | -8.615850e-47 |
| Msa0791070 | Msa1254950 | 0.829601 | 4.698084e-55 | -8.615850e-47 |
| Msa0791070 | Msa1256540 | -0.820876 | 5.439726e-53 | -8.615850e-47 |
| Msa0791070 | Msa1265960 | 0.811348 | 7.322305e-51 | -8.615850e-47 |
| Msa0791070 | Msa1271280 | 0.815697 | 8.095135e-52 | -8.615850e-47 |
| Msa0791070 | Msa1271300 | 0.820920 | 5.315517e-53 | -8.615850e-47 |
| Msa0791070 | Msa1275770 | 0.800008 | 1.762820e-48 | -8.615850e-47 |
| Msa0791070 | Msa1280130 | 0.817824 | 2.698087e-52 | -8.615850e-47 |
| Msa0791070 | Msa1284140 | 0.815026 | 1.141509e-51 | -8.615850e-47 |
| Msa0791070 | Msa1295690 | 0.820162 | 7.935957e-53 | -8.615850e-47 |
| Msa0791070 | Msa1296960 | -0.816972 | 4.197696e-52 | -8.615850e-47 |
| Msa0791070 | Msa1297090 | 0.806713 | 7.197719e-50 | -8.615850e-47 |
| Msa0791070 | Msa1304180 | 0.800628 | 1.318512e-48 | -8.615850e-47 |
| Msa0791070 | Msa1318240 | 0.800677 | 1.288216e-48 | -8.615850e-47 |
| Msa0791070 | Msa1328700 | 0.818066 | 2.379005e-52 | -8.615850e-47 |
| Msa0791070 | Msa1335970 | -0.806360 | 8.544294e-50 | -8.615850e-47 |
| Msa0791070 | Msa1340650 | 0.849820 | 2.529957e-60 | -8.615850e-47 |
| Msa0791070 | Msa1347620 | 0.802121 | 6.518783e-49 | -8.615850e-47 |
| Msa0791070 | Msa1350840 | 0.814274 | 1.674496e-51 | -8.615850e-47 |
| Msa0791070 | Msa1358870 | -0.826362 | 2.827560e-54 | -8.615850e-47 |
| Msa0791070 | Msa1365040 | -0.815348 | 9.678163e-52 | -8.615850e-47 |
| Msa0791070 | Msa1369530 | 0.807286 | 5.444995e-50 | -8.615850e-47 |
| Msa0791070 | Msa1371430 | 0.807638 | 4.584941e-50 | -8.615850e-47 |
| Msa0791070 | Msa1384350 | 0.812775 | 3.578558e-51 | -8.615850e-47 |
| Msa0791070 | Msa1388040 | 0.808782 | 2.614623e-50 | -8.615850e-47 |
| Msa0791070 | Msa1395570 | 0.816879 | 4.405250e-52 | -8.615850e-47 |
| Msa0791070 | Msa1403930 | -0.806428 | 8.266813e-50 | -8.615850e-47 |
| Msa0791070 | Msa1404540 | 0.801455 | 8.930221e-49 | -8.615850e-47 |
| Msa0791070 | Msa1405180 | 0.804640 | 1.959993e-49 | -8.615850e-47 |
| Msa0791070 | Msa1408790 | 0.829268 | 5.660788e-55 | -8.615850e-47 |
| Msa0791070 | Msa1409520 | 0.800943 | 1.136923e-48 | -8.615850e-47 |
| Msa0791070 | Msa1414740 | 0.816944 | 4.258815e-52 | -8.615850e-47 |
| Msa0791070 | Msa1423450 | 0.807683 | 4.485106e-50 | -8.615850e-47 |
| Msa0791070 | Msa1427760 | 0.803966 | 2.709157e-49 | -8.615850e-47 |
| Msa0791070 | Msa1428420 | 0.801274 | 9.727484e-49 | -8.615850e-47 |
| Msa0791070 | Msa1431000 | 0.815504 | 8.936735e-52 | -8.615850e-47 |
| Msa0791070 | Msa1436040 | 0.830679 | 2.564356e-55 | -8.615850e-47 |
| Msa0791070 | Msa1438270 | 0.803653 | 3.145598e-49 | -8.615850e-47 |
| Msa0791070 | Msa1440600 | 0.804614 | 1.985547e-49 | -8.615850e-47 |
| Msa0791070 | Msa1447090 | 0.806613 | 7.554835e-50 | -8.615850e-47 |
| Msa0791070 | Msa1447560 | 0.826350 | 2.847156e-54 | -8.615850e-47 |
| Msa0791070 | Msa1454120 | 0.805259 | 1.455277e-49 | -8.615850e-47 |
| Msa0791070 | Msa1456810 | 0.840893 | 6.609249e-58 | -8.615850e-47 |
| Msa0791070 | Msa1457670 | -0.819603 | 1.065007e-52 | -8.615850e-47 |
| Msa0791070 | Msa1464560 | 0.831000 | 2.139117e-55 | -8.615850e-47 |
| Msa0791070 | Msa1465900 | 0.806778 | 6.973221e-50 | -8.615850e-47 |
| Msa0151690 | Msa0791070 | 0.805203 | 1.495051e-49 | -8.615850e-47 |
| Msa0164360 | Msa0791070 | 0.836051 | 1.173295e-56 | -8.615850e-47 |
| Msa0168100 | Msa0791070 | 0.806330 | 8.670554e-50 | -8.615850e-47 |
| Msa0181410 | Msa0791070 | 0.804513 | 2.083381e-49 | -8.615850e-47 |
| Msa0185480 | Msa0791070 | 0.801560 | 8.501994e-49 | -8.615850e-47 |
| Msa0185640 | Msa0791070 | -0.821248 | 4.466866e-53 | -8.615850e-47 |
| Msa0188630 | Msa0791070 | 0.826857 | 2.154456e-54 | -8.615850e-47 |
| Msa0193650 | Msa0791070 | 0.809208 | 2.119764e-50 | -8.615850e-47 |
| Msa0195770 | Msa0791070 | 0.954906 | 1.024338e-112 | -8.615850e-47 |
| Msa0207000 | Msa0791070 | 0.804279 | 2.331233e-49 | -8.615850e-47 |
| Msa0208390 | Msa0791070 | 0.826045 | 3.364612e-54 | -8.615850e-47 |
| Msa0217400 | Msa0791070 | 0.857393 | 1.683062e-62 | -8.615850e-47 |
| Msa0219070 | Msa0791070 | 0.804870 | 1.755221e-49 | -8.615850e-47 |
| Msa0223380 | Msa0791070 | 0.810100 | 1.363094e-50 | -8.615850e-47 |
| Msa0230770 | Msa0791070 | 0.820035 | 8.484400e-53 | -8.615850e-47 |
| Msa0233190 | Msa0791070 | 0.802756 | 4.822732e-49 | -8.615850e-47 |
| Msa0371420 | Msa0791070 | -0.827310 | 1.679384e-54 | -8.615850e-47 |
| Msa0413740 | Msa0791070 | 0.800378 | 1.482058e-48 | -8.615850e-47 |
| Msa0414070 | Msa0791070 | 0.811196 | 7.899017e-51 | -8.615850e-47 |
| Msa0414950 | Msa0791070 | -0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0423360 | Msa0791070 | -0.840768 | 7.126047e-58 | -8.615850e-47 |
| Msa0426400 | Msa0791070 | 0.802705 | 4.941956e-49 | -8.615850e-47 |
| Msa0437710 | Msa0791070 | 0.807303 | 5.400040e-50 | -8.615850e-47 |
| Msa0442670 | Msa0791070 | 0.816826 | 4.526953e-52 | -8.615850e-47 |
| Msa0442850 | Msa0791070 | 0.815829 | 7.566365e-52 | -8.615850e-47 |
| Msa0448550 | Msa0791070 | -0.805817 | 1.111506e-49 | -8.615850e-47 |
| Msa0459770 | Msa0791070 | -0.806764 | 7.020379e-50 | -8.615850e-47 |
| Msa0465680 | Msa0791070 | -0.821351 | 4.228447e-53 | -8.615850e-47 |
| Msa0467900 | Msa0791070 | -0.807337 | 5.309876e-50 | -8.615850e-47 |
| Msa0473240 | Msa0791070 | 0.809234 | 2.092521e-50 | -8.615850e-47 |
| Msa0480320 | Msa0791070 | 0.809958 | 1.462731e-50 | -8.615850e-47 |
| Msa0240780 | Msa0791070 | 0.804725 | 1.881730e-49 | -8.615850e-47 |
| Msa0252180 | Msa0791070 | 0.807693 | 4.463117e-50 | -8.615850e-47 |
| Msa0257250 | Msa0791070 | 0.857999 | 1.113297e-62 | -8.615850e-47 |
| Msa0258670 | Msa0791070 | -0.805044 | 1.614468e-49 | -8.615850e-47 |
| Msa0258760 | Msa0791070 | 0.805966 | 1.033892e-49 | -8.615850e-47 |
| Msa0262520 | Msa0791070 | 0.806170 | 9.367171e-50 | -8.615850e-47 |
| Msa0265820 | Msa0791070 | 0.806335 | 8.645540e-50 | -8.615850e-47 |
| Msa0266000 | Msa0791070 | -0.828962 | 6.715440e-55 | -8.615850e-47 |
| Msa0269360 | Msa0791070 | 0.835220 | 1.905000e-56 | -8.615850e-47 |
| Msa0270270 | Msa0791070 | 0.832107 | 1.141642e-55 | -8.615850e-47 |
| Msa0275670 | Msa0791070 | 0.809636 | 1.716028e-50 | -8.615850e-47 |
| Msa0282250 | Msa0791070 | 0.842997 | 1.836467e-58 | -8.615850e-47 |
| Msa0282590 | Msa0791070 | 0.811292 | 7.529221e-51 | -8.615850e-47 |
| Msa0288240 | Msa0791070 | 0.814638 | 1.391248e-51 | -8.615850e-47 |
| Msa0288330 | Msa0791070 | 0.802177 | 6.348765e-49 | -8.615850e-47 |
| Msa0294960 | Msa0791070 | 0.819968 | 8.789616e-53 | -8.615850e-47 |
| Msa0296560 | Msa0791070 | 0.847870 | 8.794203e-60 | -8.615850e-47 |
| Msa0296760 | Msa0791070 | 0.802621 | 5.142385e-49 | -8.615850e-47 |
| Msa0304740 | Msa0791070 | 0.835826 | 1.338648e-56 | -8.615850e-47 |
| Msa0313990 | Msa0791070 | 0.841298 | 5.172595e-58 | -8.615850e-47 |
| Msa0323180 | Msa0791070 | 0.810526 | 1.103281e-50 | -8.615850e-47 |
| Msa0323620 | Msa0791070 | 0.803984 | 2.685816e-49 | -8.615850e-47 |
| Msa0325470 | Msa0791070 | 0.815995 | 6.947155e-52 | -8.615850e-47 |
| Msa0326670 | Msa0791070 | 0.823370 | 1.436743e-53 | -8.615850e-47 |
| Msa0331590 | Msa0791070 | 0.833294 | 5.792589e-56 | -8.615850e-47 |
| Msa0331920 | Msa0791070 | 0.818891 | 1.546670e-52 | -8.615850e-47 |
| Msa0333720 | Msa0791070 | -0.812585 | 3.936669e-51 | -8.615850e-47 |
| Msa0335040 | Msa0791070 | 0.839984 | 1.142449e-57 | -8.615850e-47 |
| Msa0336270 | Msa0791070 | 0.805469 | 1.314848e-49 | -8.615850e-47 |
| Msa0338110 | Msa0791070 | 0.803132 | 4.033709e-49 | -8.615850e-47 |
| Msa0342200 | Msa0791070 | 0.824621 | 7.310832e-54 | -8.615850e-47 |
| Msa0342340 | Msa0791070 | -0.812969 | 3.243604e-51 | -8.615850e-47 |
| Msa0344830 | Msa0791070 | 0.807764 | 4.310942e-50 | -8.615850e-47 |
| Msa0488400 | Msa0791070 | 0.819323 | 1.233428e-52 | -8.615850e-47 |
| Msa0490350 | Msa0791070 | 0.815260 | 1.012442e-51 | -8.615850e-47 |
| Msa0505390 | Msa0791070 | 0.800586 | 1.344241e-48 | -8.615850e-47 |
| Msa0505660 | Msa0791070 | 0.814026 | 1.899816e-51 | -8.615850e-47 |
| Msa0508200 | Msa0791070 | 0.811632 | 6.353523e-51 | -8.615850e-47 |
| Msa0509970 | Msa0791070 | 0.810936 | 8.995061e-51 | -8.615850e-47 |
| Msa0511720 | Msa0791070 | -0.803950 | 2.728825e-49 | -8.615850e-47 |
| Msa0518610 | Msa0791070 | 0.810862 | 9.331658e-51 | -8.615850e-47 |
| Msa0524120 | Msa0791070 | 0.805603 | 1.232738e-49 | -8.615850e-47 |
| Msa0535060 | Msa0791070 | 0.805976 | 1.029050e-49 | -8.615850e-47 |
| Msa0535450 | Msa0791070 | 0.827942 | 1.183966e-54 | -8.615850e-47 |
| Msa0540320 | Msa0791070 | 0.841065 | 5.954686e-58 | -8.615850e-47 |
| Msa0567020 | Msa0791070 | 0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0577620 | Msa0791070 | 0.802606 | 5.180633e-49 | -8.615850e-47 |
| Msa0578970 | Msa0791070 | 0.810524 | 1.104664e-50 | -8.615850e-47 |
| Msa0582110 | Msa0791070 | 0.837055 | 6.512734e-57 | -8.615850e-47 |
| Msa0583940 | Msa0791070 | 0.806298 | 8.802951e-50 | -8.615850e-47 |
| Msa0585700 | Msa0791070 | 0.804224 | 2.394187e-49 | -8.615850e-47 |
| Msa0587690 | Msa0791070 | 0.803284 | 3.751393e-49 | -8.615850e-47 |
| Msa0596100 | Msa0791070 | 0.833587 | 4.896264e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791070 | MtrunA17_Chr2g0287011 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 684 |
| Msa0791070 | MtrunA17_Chr4g0020191 | 71.920 | 349 | 83 | 7 | 1 | 339 | 1 | 344 | 2.10e-156 | 442 |
| Msa0791070 | MtrunA17_Chr4g0076031 | 48.057 | 283 | 144 | 2 | 53 | 334 | 1 | 281 | 3.26e-90 | 271 |
| Msa0791070 | MtrunA17_Chr2g0290111 | 42.813 | 327 | 183 | 3 | 10 | 334 | 8 | 332 | 1.22e-88 | 269 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0791070 | AT5G18940.1 | 78.947 | 323 | 68 | 0 | 1 | 323 | 1 | 323 | 0.0 | 530 |
| Msa0791070 | AT5G18940.2 | 78.328 | 323 | 68 | 1 | 1 | 323 | 1 | 321 | 0.0 | 520 |
| Msa0791070 | AT5G47540.1 | 44.411 | 331 | 176 | 4 | 9 | 334 | 7 | 334 | 2.22e-92 | 279 |
| Msa0791070 | AT4G17270.1 | 43.202 | 331 | 180 | 4 | 9 | 334 | 7 | 334 | 9.91e-91 | 275 |
| Msa0791070 | AT2G03410.1 | 39.466 | 337 | 195 | 5 | 9 | 339 | 7 | 340 | 2.29e-72 | 228 |
Find 70 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACATCTCGCGGCTTATT+AGG | 0.268568 | 5_3:-1924060 | None:intergenic |
| ACAATGAGAACTATGCTTTC+TGG | 0.269593 | 5_3:+1920181 | Msa0791070:CDS |
| TGCCTCCTTGTGACATAATT+AGG | 0.329250 | 5_3:-1923223 | None:intergenic |
| TTTAACTTCAACAACAGTTT+TGG | 0.330848 | 5_3:-1919170 | None:intergenic |
| ACCAAGAAAATATAGTAATA+AGG | 0.337120 | 5_3:+1924622 | Msa0791070:three_prime_UTR |
| ATATCTTACTTTGCAAGATT+CGG | 0.337851 | 5_3:-1921690 | None:intergenic |
| TACTTTATTGTAGGCTTTAG+AGG | 0.341874 | 5_3:+1920138 | Msa0791070:intron |
| ATAAATTTAGCTTCTCCTAA+TGG | 0.349788 | 5_3:+1924705 | Msa0791070:three_prime_UTR |
| ATTCACAAGTTGCCTATACT+TGG | 0.363293 | 5_3:+1920286 | Msa0791070:CDS |
| CGCTTCATTATCTGAGCATT+GGG | 0.365807 | 5_3:-1923386 | None:intergenic |
| GGGTGTTCTCAGATACATAT+TGG | 0.370824 | 5_3:+1922015 | Msa0791070:intron |
| ATCAAATCTAAACAGTTTAG+AGG | 0.372849 | 5_3:-1924747 | None:intergenic |
| TAGCTTCTCCTAATGGTGTT+GGG | 0.378725 | 5_3:+1924712 | Msa0791070:three_prime_UTR |
| TGAAAAGAAAGAAATGAAAA+TGG | 0.396672 | 5_3:-1919014 | None:intergenic |
| CTGTGTTTCTAGATGTTGTT+GGG | 0.402644 | 5_3:-1919038 | None:intergenic |
| GAGCTCTGGCATAATGTTGC+GGG | 0.412362 | 5_3:+1921653 | Msa0791070:CDS |
| AATCTCAACCCAACACCATT+AGG | 0.416234 | 5_3:-1924720 | None:intergenic |
| TGTGAAACCTGATCTAAATT+CGG | 0.430120 | 5_3:-1920220 | None:intergenic |
| ATCAGAACCGAATTTAGATC+AGG | 0.437545 | 5_3:+1920213 | Msa0791070:CDS |
| CACAAGGAGGCAGTCTATAA+AGG | 0.441867 | 5_3:+1923234 | Msa0791070:CDS |
| GACGATATTGTTGAAACAAA+AGG | 0.442977 | 5_3:+1920426 | Msa0791070:CDS |
| AAAGAAATTGCCCTGAGCTC+TGG | 0.447061 | 5_3:+1921639 | Msa0791070:CDS |
| GTATTCTACACAGCAATCAT+TGG | 0.448420 | 5_3:-1920455 | None:intergenic |
| CTTACTTCCCATCCAAGTAT+AGG | 0.450135 | 5_3:-1920298 | None:intergenic |
| TCTGTGTTTCTAGATGTTGT+TGG | 0.454037 | 5_3:-1919039 | None:intergenic |
| ATTCGCTAAGATCTTGATAC+TGG | 0.454245 | 5_3:+1924661 | Msa0791070:three_prime_UTR |
| ATTACTTCATAATCTATCTC+CGG | 0.460743 | 5_3:+1924119 | Msa0791070:CDS |
| GTCTATCAAAGAGAGTCTTA+TGG | 0.461061 | 5_3:+1919138 | Msa0791070:CDS |
| GCAACATTATGCCAGAGCTC+AGG | 0.463232 | 5_3:-1921650 | None:intergenic |
| AGAACTATGCTTTCTGGAGA+TGG | 0.464715 | 5_3:+1920187 | Msa0791070:CDS |
| CAGTTGCATGTTTAGAAAGA+AGG | 0.473512 | 5_3:-1922229 | None:intergenic |
| ACGCTTCATTATCTGAGCAT+TGG | 0.476990 | 5_3:-1923387 | None:intergenic |
| TTAGCTTCTCCTAATGGTGT+TGG | 0.478686 | 5_3:+1924711 | Msa0791070:three_prime_UTR |
| CCTTCTTTCTTCCACTTCGA+TGG | 0.479876 | 5_3:+1918891 | Msa0791070:five_prime_UTR |
| CATAATCTATCTCCGGGAAA+AGG | 0.480348 | 5_3:+1924126 | Msa0791070:CDS |
| TTCAAATCTAATTTGATGCA+AGG | 0.482900 | 5_3:+1924410 | Msa0791070:three_prime_UTR |
| TTTCGTTCTTTAAGGTTTCG+AGG | 0.487199 | 5_3:+1919089 | Msa0791070:CDS |
| CTTTGATACTAAAAGTAAGT+AGG | 0.493693 | 5_3:+1924558 | Msa0791070:three_prime_UTR |
| TACTAGACTTTCTTGTTGCA+TGG | 0.494982 | 5_3:+1920497 | Msa0791070:CDS |
| ACAAGTTGCCTATACTTGGA+TGG | 0.498032 | 5_3:+1920290 | Msa0791070:CDS |
| GAAAGGATTTAGTCCACTGT+TGG | 0.511448 | 5_3:+1920404 | Msa0791070:CDS |
| CAAGTTGCCTATACTTGGAT+GGG | 0.523597 | 5_3:+1920291 | Msa0791070:CDS |
| AGATCAGGTTTCACAGCTTG+TGG | 0.526178 | 5_3:+1920228 | Msa0791070:CDS |
| TCAGATGCTACATCGAAGTT+AGG | 0.532582 | 5_3:-1922079 | None:intergenic |
| CCATCGAAGTGGAAGAAAGA+AGG | 0.535417 | 5_3:-1918891 | None:intergenic |
| CTTCGATGGTATTTGCTATG+TGG | 0.537243 | 5_3:+1918905 | Msa0791070:five_prime_UTR |
| AGAAGATGAGCAATTTGAAG+AGG | 0.542432 | 5_3:+1924285 | Msa0791070:CDS |
| TGAGCTCTGGCATAATGTTG+CGG | 0.544211 | 5_3:+1921652 | Msa0791070:CDS |
| TTACTTCATAATCTATCTCC+GGG | 0.560293 | 5_3:+1924120 | Msa0791070:CDS |
| CAACATTATGCCAGAGCTCA+GGG | 0.566104 | 5_3:-1921649 | None:intergenic |
| TTCGAGGCCTAAAACGCCGC+AGG | 0.582226 | 5_3:+1919105 | Msa0791070:CDS |
| TGAAGTTAAAGCTCTTGAGA+AGG | 0.595727 | 5_3:+1919183 | Msa0791070:CDS |
| TCTGTGAGCAAGTAATGTGT+TGG | 0.610638 | 5_3:+1924447 | Msa0791070:three_prime_UTR |
| TAATTCTAGGGAAGAACAAG+GGG | 0.613993 | 5_3:+1924085 | Msa0791070:CDS |
| CATAGCAAATACCATCGAAG+TGG | 0.615281 | 5_3:-1918902 | None:intergenic |
| AGTCATGATGACATTGTTGA+CGG | 0.620587 | 5_3:+1923436 | Msa0791070:CDS |
| ATAATTCTAGGGAAGAACAA+GGG | 0.620745 | 5_3:+1924084 | Msa0791070:CDS |
| TCAGGTTTCACAGCTTGTGG+AGG | 0.621980 | 5_3:+1920231 | Msa0791070:CDS |
| TTGATGCAAGGATTTCATGT+TGG | 0.626855 | 5_3:+1924422 | Msa0791070:three_prime_UTR |
| AATAATTCTAGGGAAGAACA+AGG | 0.636933 | 5_3:+1924083 | Msa0791070:CDS |
| CATCTCCTAATTATGTCACA+AGG | 0.648740 | 5_3:+1923218 | Msa0791070:CDS |
| TTCAAATCTGACCTTAAACG+TGG | 0.653367 | 5_3:-1922110 | None:intergenic |
| GCTTGTGGAGGAAATCTGCA+AGG | 0.666944 | 5_3:+1920243 | Msa0791070:CDS |
| AAAGAAAGAAATGAAAATGG+TGG | 0.669721 | 5_3:-1919011 | None:intergenic |
| TTTGACAACTCACTACGATG+AGG | 0.670117 | 5_3:+1922265 | Msa0791070:CDS |
| TGAGCAAGTAATGTGTTGGA+AGG | 0.678382 | 5_3:+1924451 | Msa0791070:three_prime_UTR |
| ATAGACTTGACAACTTCCTG+CGG | 0.688823 | 5_3:-1919121 | None:intergenic |
| TCAACAATATCGTCCAACAG+TGG | 0.704888 | 5_3:-1920417 | None:intergenic |
| CTCCTAATTATGTCACAAGG+AGG | 0.705583 | 5_3:+1923221 | Msa0791070:CDS |
| TGTGGAGGAAATCTGCAAGG+AGG | 0.743747 | 5_3:+1920246 | Msa0791070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATTTTCACAAAATT+GGG | - | chr5_3:1919676-1919695 | None:intergenic | 10.0% |
| !! | TAAAATTACTCATAAATATA+TGG | + | chr5_3:1919836-1919855 | Msa0791070:intron | 10.0% |
| !! | AATTAAGAGATATTTAAAAA+AGG | - | chr5_3:1922950-1922969 | None:intergenic | 10.0% |
| !! | AACAATTGAATTTAATTATA+TGG | + | chr5_3:1923329-1923348 | Msa0791070:intron | 10.0% |
| !!! | ATTTATTTGATGTTATTTTA+TGG | + | chr5_3:1923587-1923606 | Msa0791070:intron | 10.0% |
| !! | TATTACAATACTAATAAAAA+TGG | - | chr5_3:1924504-1924523 | None:intergenic | 10.0% |
| !!! | AATTGAAAATTTAGAACAAA+GGG | - | chr5_3:1919242-1919261 | None:intergenic | 15.0% |
| !!! | TAATTGAAAATTTAGAACAA+AGG | - | chr5_3:1919243-1919262 | None:intergenic | 15.0% |
| !!! | CTATTTTATTTTCACAAAAT+TGG | - | chr5_3:1919677-1919696 | None:intergenic | 15.0% |
| !!! | TTTTGTGAAAATAAAATAGT+TGG | + | chr5_3:1919678-1919697 | Msa0791070:intron | 15.0% |
| !! | AATATATAATGTTTCCAATT+TGG | - | chr5_3:1920647-1920666 | None:intergenic | 15.0% |
| !! | AAATTGGAAACATTATATAT+TGG | + | chr5_3:1920646-1920665 | Msa0791070:intron | 15.0% |
| !!! | TCTTTTAATAATTGCTTTAA+AGG | - | chr5_3:1921013-1921032 | None:intergenic | 15.0% |
| !!! | TTAATTTTCTTGTTTTGTTA+AGG | + | chr5_3:1921098-1921117 | Msa0791070:intron | 15.0% |
| !!! | AAAATGATTTTTCTAAAATC+AGG | + | chr5_3:1921472-1921491 | Msa0791070:intron | 15.0% |
| !! | AAAAAAGTAGATTCTAATAT+TGG | + | chr5_3:1921816-1921835 | Msa0791070:intron | 15.0% |
| !! | AAAAAGTAGATTCTAATATT+GGG | + | chr5_3:1921817-1921836 | Msa0791070:intron | 15.0% |
| !! | TTGATTATCAATGATTATTT+AGG | + | chr5_3:1921922-1921941 | Msa0791070:intron | 15.0% |
| !!! | TTTTAACTTTCTGATTTTTT+TGG | + | chr5_3:1921994-1922013 | Msa0791070:intron | 15.0% |
| !!! | TTTAACTTTCTGATTTTTTT+GGG | + | chr5_3:1921995-1922014 | Msa0791070:intron | 15.0% |
| !! | TTTAACATATATGTAACAAA+CGG | - | chr5_3:1922486-1922505 | None:intergenic | 15.0% |
| !! | GACAAAAAAAGTTAAAAAAT+TGG | + | chr5_3:1922521-1922540 | Msa0791070:intron | 15.0% |
| !! | TATGATAAAAAAACACAAAA+TGG | + | chr5_3:1922918-1922937 | Msa0791070:intron | 15.0% |
| !! | TTGTTTATAATCATAACAAA+TGG | + | chr5_3:1922990-1923009 | Msa0791070:intron | 15.0% |
| !! | CATGTACATAAAAAAAAAAA+AGG | - | chr5_3:1923303-1923322 | None:intergenic | 15.0% |
| !!! | TCGAATTTTTTTTTAATAAC+AGG | + | chr5_3:1923851-1923870 | Msa0791070:intron | 15.0% |
| !! | TTTAATGTATTTATTCTAGT+TGG | + | chr5_3:1923890-1923909 | Msa0791070:intron | 15.0% |
| !!! | TATTAATTTTATCTCTTTTG+CGG | + | chr5_3:1924251-1924270 | Msa0791070:intron | 15.0% |
| !! | CTTAATTATAAACAAAAAGT+AGG | + | chr5_3:1924587-1924606 | Msa0791070:three_prime_UTR | 15.0% |
| !! | TGAAAAGAAAGAAATGAAAA+TGG | - | chr5_3:1919017-1919036 | None:intergenic | 20.0% |
| !!! | ATTGAAAATTTAGAACAAAG+GGG | - | chr5_3:1919241-1919260 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATTACTCTATC+TGG | + | chr5_3:1919250-1919269 | Msa0791070:intron | 20.0% |
| !!! | AATTTTCAATTACTCTATCT+GGG | + | chr5_3:1919251-1919270 | Msa0791070:intron | 20.0% |
| !! | ATAATTGTCTCTTTATAAGA+AGG | + | chr5_3:1919607-1919626 | Msa0791070:intron | 20.0% |
| !! | CATAGATCATTGAAAAATTA+TGG | + | chr5_3:1920878-1920897 | Msa0791070:intron | 20.0% |
| !! | TATATCTCTATAATATTCTC+GGG | - | chr5_3:1921294-1921313 | None:intergenic | 20.0% |
| !! | CTATATCTCTATAATATTCT+CGG | - | chr5_3:1921295-1921314 | None:intergenic | 20.0% |
| !!! | TAAAATTGATTCATGCAAAA+CGG | + | chr5_3:1921425-1921444 | Msa0791070:intron | 20.0% |
| !! | TCCAAAATATATGTATGAAA+TGG | - | chr5_3:1922191-1922210 | None:intergenic | 20.0% |
| !! | TAAATAATAATAACCACTGT+TGG | + | chr5_3:1922450-1922469 | Msa0791070:intron | 20.0% |
| !! | AAATAATAATAACCACTGTT+GGG | + | chr5_3:1922451-1922470 | Msa0791070:intron | 20.0% |
| !! | ATACAATAAGAAATGAACTT+TGG | - | chr5_3:1923939-1923958 | None:intergenic | 20.0% |
| !! | AAAACTAAAACTCAAATGAT+TGG | - | chr5_3:1924001-1924020 | None:intergenic | 20.0% |
| !! | GAGATGTAAAAATAATTCTA+GGG | + | chr5_3:1924073-1924092 | Msa0791070:CDS | 20.0% |
| !! | ATTATAAACAAAAAGTAGGT+AGG | + | chr5_3:1924591-1924610 | Msa0791070:three_prime_UTR | 20.0% |
| !! | ACCAAGAAAATATAGTAATA+AGG | + | chr5_3:1924622-1924641 | Msa0791070:three_prime_UTR | 20.0% |
| !!! | ACCTTATTACTATATTTTCT+TGG | - | chr5_3:1924626-1924645 | None:intergenic | 20.0% |
| ! | AAAGAAAGAAATGAAAATGG+TGG | - | chr5_3:1919014-1919033 | None:intergenic | 25.0% |
| !!! | TTTAACTTCAACAACAGTTT+TGG | - | chr5_3:1919173-1919192 | None:intergenic | 25.0% |
| !!! | AAAGTTTCCGTTTTTAATCA+TGG | + | chr5_3:1919291-1919310 | Msa0791070:intron | 25.0% |
| !!! | AAGTTTCCGTTTTTAATCAT+GGG | + | chr5_3:1919292-1919311 | Msa0791070:intron | 25.0% |
| ! | TACATACCCATGATTAAAAA+CGG | - | chr5_3:1919301-1919320 | None:intergenic | 25.0% |
| !!! | TTGTTGTTAAGTAGTTTTGT+TGG | + | chr5_3:1919415-1919434 | Msa0791070:intron | 25.0% |
| !! | AAAGAAGATAGCATTTTGTT+TGG | + | chr5_3:1919718-1919737 | Msa0791070:intron | 25.0% |
| !!! | AAGAAGATAGCATTTTGTTT+GGG | + | chr5_3:1919719-1919738 | Msa0791070:intron | 25.0% |
| ! | AATATATGGAAAATGCTTGT+TGG | + | chr5_3:1919850-1919869 | Msa0791070:intron | 25.0% |
| !!! | TGCTTGTTTTACTTTATTGT+AGG | + | chr5_3:1920129-1920148 | Msa0791070:intron | 25.0% |
| !! | GTTTTTCTTTCAATGTCTTT+TGG | + | chr5_3:1920668-1920687 | Msa0791070:intron | 25.0% |
| !!! | AATTTTTCAGACTTCTTATC+AGG | - | chr5_3:1920703-1920722 | None:intergenic | 25.0% |
| ! | GATAAGAAGTCTGAAAAATT+TGG | + | chr5_3:1920703-1920722 | Msa0791070:intron | 25.0% |
| ! | ATATTCAGTTCTTCGAAAAT+TGG | - | chr5_3:1920829-1920848 | None:intergenic | 25.0% |
| !! | TAGAACATTATGTCATCTTT+TGG | - | chr5_3:1920857-1920876 | None:intergenic | 25.0% |
| ! | ACTTTCTACTCTAAATTTAG+CGG | - | chr5_3:1921041-1921060 | None:intergenic | 25.0% |
| !!! | TTTCTTGTTTTGTTAAGGAT+TGG | + | chr5_3:1921103-1921122 | Msa0791070:intron | 25.0% |
| !!! | TCCATTTTGAAATGAGTTTT+TGG | + | chr5_3:1921183-1921202 | Msa0791070:intron | 25.0% |
| ! | TCCAAAAACTCATTTCAAAA+TGG | - | chr5_3:1921187-1921206 | None:intergenic | 25.0% |
| ! | ATATCTCTATAATATTCTCG+GGG | - | chr5_3:1921293-1921312 | None:intergenic | 25.0% |
| ! | TATTATAGAGATATAGCATG+TGG | + | chr5_3:1921299-1921318 | Msa0791070:intron | 25.0% |
| ! | GAAATAAACTTTCAAGGAAA+AGG | - | chr5_3:1921335-1921354 | None:intergenic | 25.0% |
| ! | GAAAGAGAAATAAACTTTCA+AGG | - | chr5_3:1921341-1921360 | None:intergenic | 25.0% |
| !! | TACTTTGAAGATTATAGTCT+AGG | + | chr5_3:1921397-1921416 | Msa0791070:intron | 25.0% |
| !! | ACTTTGAAGATTATAGTCTA+GGG | + | chr5_3:1921398-1921417 | Msa0791070:intron | 25.0% |
| !! | AATTTCTTTGTTATCATAGC+TGG | - | chr5_3:1921628-1921647 | None:intergenic | 25.0% |
| ! | ATATCTTACTTTGCAAGATT+CGG | - | chr5_3:1921693-1921712 | None:intergenic | 25.0% |
| !! | TCTTGCAAAGTAAGATATTT+TGG | + | chr5_3:1921695-1921714 | Msa0791070:intron | 25.0% |
| !! | CTTGCAAAGTAAGATATTTT+GGG | + | chr5_3:1921696-1921715 | Msa0791070:intron | 25.0% |
| ! | AATATTGGGATAATATACTG+TGG | + | chr5_3:1921831-1921850 | Msa0791070:intron | 25.0% |
| ! | TCATGCAATCTATTAGAAAA+AGG | + | chr5_3:1921955-1921974 | Msa0791070:intron | 25.0% |
| ! | ACATCAAGATAAGTAGTTAT+GGG | - | chr5_3:1922158-1922177 | None:intergenic | 25.0% |
| ! | AACATCAAGATAAGTAGTTA+TGG | - | chr5_3:1922159-1922178 | None:intergenic | 25.0% |
| !! | GCCATTTCATACATATATTT+TGG | + | chr5_3:1922187-1922206 | Msa0791070:intron | 25.0% |
| ! | CAAATCAGATAAGTATGTTA+AGG | - | chr5_3:1922301-1922320 | None:intergenic | 25.0% |
| !! | TATCTGATTTGAACATATGA+AGG | + | chr5_3:1922310-1922329 | Msa0791070:intron | 25.0% |
| !! | AAAAAATTGGTTCAAATGAG+AGG | + | chr5_3:1922534-1922553 | Msa0791070:intron | 25.0% |
| !!! | ACTTTTAAGTTGTTTGTTAG+CGG | - | chr5_3:1922687-1922706 | None:intergenic | 25.0% |
| ! | CTCATTGTATAAATTTGAAG+GGG | - | chr5_3:1923676-1923695 | None:intergenic | 25.0% |
| ! | GCTCATTGTATAAATTTGAA+GGG | - | chr5_3:1923677-1923696 | None:intergenic | 25.0% |
| ! | AGCTCATTGTATAAATTTGA+AGG | - | chr5_3:1923678-1923697 | None:intergenic | 25.0% |
| !! | TTCTTTTATAAATCGCCAAA+AGG | - | chr5_3:1923704-1923723 | None:intergenic | 25.0% |
| ! | ACAAAACTTTACAAAGAATG+GGG | - | chr5_3:1923776-1923795 | None:intergenic | 25.0% |
| ! | CACAAAACTTTACAAAGAAT+GGG | - | chr5_3:1923777-1923796 | None:intergenic | 25.0% |
| ! | ACACAAAACTTTACAAAGAA+TGG | - | chr5_3:1923778-1923797 | None:intergenic | 25.0% |
| !!! | AGAATTATTTTTACATCTCG+CGG | - | chr5_3:1924072-1924091 | None:intergenic | 25.0% |
| ! | CGAGATGTAAAAATAATTCT+AGG | + | chr5_3:1924072-1924091 | Msa0791070:CDS | 25.0% |
| ! | ATTACTTCATAATCTATCTC+CGG | + | chr5_3:1924119-1924138 | Msa0791070:CDS | 25.0% |
| ! | TTCAAATCTAATTTGATGCA+AGG | + | chr5_3:1924410-1924429 | Msa0791070:three_prime_UTR | 25.0% |
| ! | CTTTGATACTAAAAGTAAGT+AGG | + | chr5_3:1924558-1924577 | Msa0791070:three_prime_UTR | 25.0% |
| !! | ATAAATTTAGCTTCTCCTAA+TGG | + | chr5_3:1924705-1924724 | Msa0791070:three_prime_UTR | 25.0% |
| TTAGCGTGTAAATCACAAAT+GGG | - | chr5_3:1919212-1919231 | None:intergenic | 30.0% | |
| ATTAGCGTGTAAATCACAAA+TGG | - | chr5_3:1919213-1919232 | None:intergenic | 30.0% | |
| ! | CTTAACAACAATCAGTTTTC+AGG | - | chr5_3:1919406-1919425 | None:intergenic | 30.0% |
| GTTACTTGTTTCGTAAATGA+AGG | + | chr5_3:1919518-1919537 | Msa0791070:intron | 30.0% | |
| AACAGATATCATAACCCAAT+TGG | - | chr5_3:1919645-1919664 | None:intergenic | 30.0% | |
| !! | GAGTAATTTTAGTGCTTGTT+TGG | - | chr5_3:1919827-1919846 | None:intergenic | 30.0% |
| CAACAAAATGATAACACTCA+GGG | - | chr5_3:1920035-1920054 | None:intergenic | 30.0% | |
| ACAACAAAATGATAACACTC+AGG | - | chr5_3:1920036-1920055 | None:intergenic | 30.0% | |
| AATAACTGCAAGTAAGAGAA+AGG | - | chr5_3:1920086-1920105 | None:intergenic | 30.0% | |
| ! | TACTTTATTGTAGGCTTTAG+AGG | + | chr5_3:1920138-1920157 | Msa0791070:intron | 30.0% |
| TGTGAAACCTGATCTAAATT+CGG | - | chr5_3:1920223-1920242 | None:intergenic | 30.0% | |
| !! | AATTTTGATACAGGCTAGAA+AGG | + | chr5_3:1920387-1920406 | Msa0791070:intron | 30.0% |
| GACGATATTGTTGAAACAAA+AGG | + | chr5_3:1920426-1920445 | Msa0791070:CDS | 30.0% | |
| TAGTGACAACACATTGAAAA+AGG | - | chr5_3:1920576-1920595 | None:intergenic | 30.0% | |
| GTTCGTAATTGTATTCAAGT+TGG | + | chr5_3:1920598-1920617 | Msa0791070:intron | 30.0% | |
| !! | GTAATTGTATTCAAGTTGGT+TGG | + | chr5_3:1920602-1920621 | Msa0791070:intron | 30.0% |
| ! | AAGTCTGAAAAATTTGGTGA+AGG | + | chr5_3:1920709-1920728 | Msa0791070:intron | 30.0% |
| !! | AAATTGGAGAAGCACTTTAA+TGG | - | chr5_3:1920813-1920832 | None:intergenic | 30.0% |
| !!! | TGTTTTGTTAAGGATTGGTT+TGG | + | chr5_3:1921108-1921127 | Msa0791070:intron | 30.0% |
| !! | AAATGAGTTTTTGGACGAAA+GGG | + | chr5_3:1921192-1921211 | Msa0791070:intron | 30.0% |
| AGAAACAGAGATGAAGATAT+CGG | - | chr5_3:1921795-1921814 | None:intergenic | 30.0% | |
| AGAAAGTTAAAACAGTGCAA+CGG | - | chr5_3:1921986-1922005 | None:intergenic | 30.0% | |
| ATCAGATAAGTATGTTAAGG+AGG | - | chr5_3:1922298-1922317 | None:intergenic | 30.0% | |
| TTGGTGAAAATATTCAACTG+AGG | - | chr5_3:1922371-1922390 | None:intergenic | 30.0% | |
| ! | TCAGTTGAATATTTTCACCA+AGG | + | chr5_3:1922370-1922389 | Msa0791070:intron | 30.0% |
| CAACAGAAGTTGTAATAAAC+AGG | - | chr5_3:1922406-1922425 | None:intergenic | 30.0% | |
| AAATAGCAAACGTTTACCAT+TGG | + | chr5_3:1922633-1922652 | Msa0791070:intron | 30.0% | |
| !!! | CATGCTTTATTTTTACAGCA+TGG | - | chr5_3:1922714-1922733 | None:intergenic | 30.0% |
| ATAACAAATGGAAAATCTCC+TGG | + | chr5_3:1923002-1923021 | Msa0791070:intron | 30.0% | |
| ! | ACTCGGTTAAATTATTTTCC+AGG | - | chr5_3:1923023-1923042 | None:intergenic | 30.0% |
| !! | AAGTCTTATTAGAAAAGTGC+GGG | - | chr5_3:1923159-1923178 | None:intergenic | 30.0% |
| !! | GAAGTCTTATTAGAAAAGTG+CGG | - | chr5_3:1923160-1923179 | None:intergenic | 30.0% |
| !!! | ATATGGATTTTAGCTTCTCT+CGG | + | chr5_3:1923346-1923365 | Msa0791070:intron | 30.0% |
| !!! | TGTTATTTTATGGATTGAGC+AGG | + | chr5_3:1923597-1923616 | Msa0791070:intron | 30.0% |
| GAAAAATCACCTTGAAAATG+TGG | - | chr5_3:1923654-1923673 | None:intergenic | 30.0% | |
| ! | TTGATTAACGGGCATAAATA+TGG | - | chr5_3:1923733-1923752 | None:intergenic | 30.0% |
| TCGCAGTTACATTTGATTAA+CGG | - | chr5_3:1923745-1923764 | None:intergenic | 30.0% | |
| ! | AATAATTCTAGGGAAGAACA+AGG | + | chr5_3:1924083-1924102 | Msa0791070:CDS | 30.0% |
| ! | ATAATTCTAGGGAAGAACAA+GGG | + | chr5_3:1924084-1924103 | Msa0791070:CDS | 30.0% |
| TTACTTCATAATCTATCTCC+GGG | + | chr5_3:1924120-1924139 | Msa0791070:CDS | 30.0% | |
| ! | TCATCTGAATTTTCATTCTG+TGG | + | chr5_3:1924193-1924212 | Msa0791070:intron | 30.0% |
| ! | TTATCTCTTTTGCGGTTTTT+AGG | + | chr5_3:1924259-1924278 | Msa0791070:intron | 30.0% |
| GGAAAAAGAGTTTATCATCA+AGG | + | chr5_3:1924306-1924325 | Msa0791070:CDS | 30.0% | |
| !! | CTGTGTTTCTAGATGTTGTT+GGG | - | chr5_3:1919041-1919060 | None:intergenic | 35.0% |
| !! | TCTGTGTTTCTAGATGTTGT+TGG | - | chr5_3:1919042-1919061 | None:intergenic | 35.0% |
| !!! | CATGTCGTTTTCGTTCTTTA+AGG | + | chr5_3:1919081-1919100 | Msa0791070:exon | 35.0% |
| !! | TTTCGTTCTTTAAGGTTTCG+AGG | + | chr5_3:1919089-1919108 | Msa0791070:CDS | 35.0% |
| GTCTATCAAAGAGAGTCTTA+TGG | + | chr5_3:1919138-1919157 | Msa0791070:CDS | 35.0% | |
| TGAAGTTAAAGCTCTTGAGA+AGG | + | chr5_3:1919183-1919202 | Msa0791070:CDS | 35.0% | |
| ! | GAAAATTTAGAACAAAGGGG+TGG | - | chr5_3:1919238-1919257 | None:intergenic | 35.0% |
| ACTTGTTTCGTAAATGAAGG+AGG | + | chr5_3:1919521-1919540 | Msa0791070:intron | 35.0% | |
| AAGTCATCAATGCTTTCTGA+TGG | + | chr5_3:1919557-1919576 | Msa0791070:intron | 35.0% | |
| CAATGCTTTCTGATGGAAAT+TGG | + | chr5_3:1919564-1919583 | Msa0791070:intron | 35.0% | |
| !!! | AGGTCATTTTTGCTTCCAAT+TGG | + | chr5_3:1919627-1919646 | Msa0791070:intron | 35.0% |
| !!! | GGTCATTTTTGCTTCCAATT+GGG | + | chr5_3:1919628-1919647 | Msa0791070:intron | 35.0% |
| !! | TCTTTCAAGTTAATACAGCG+TGG | + | chr5_3:1919800-1919819 | Msa0791070:intron | 35.0% |
| ATATCACTGGAACGTATCTA+TGG | - | chr5_3:1920059-1920078 | None:intergenic | 35.0% | |
| ! | AGAGAAAGGCATAATATCAC+TGG | - | chr5_3:1920072-1920091 | None:intergenic | 35.0% |
| TACTTGCAGTTATTCTACAG+TGG | + | chr5_3:1920092-1920111 | Msa0791070:intron | 35.0% | |
| AGTTATTCTACAGTGGTTAC+TGG | + | chr5_3:1920099-1920118 | Msa0791070:intron | 35.0% | |
| ACAATGAGAACTATGCTTTC+TGG | + | chr5_3:1920181-1920200 | Msa0791070:CDS | 35.0% | |
| ATCAGAACCGAATTTAGATC+AGG | + | chr5_3:1920213-1920232 | Msa0791070:CDS | 35.0% | |
| ATTCACAAGTTGCCTATACT+TGG | + | chr5_3:1920286-1920305 | Msa0791070:CDS | 35.0% | |
| GTATTCTACACAGCAATCAT+TGG | - | chr5_3:1920458-1920477 | None:intergenic | 35.0% | |
| TACTAGACTTTCTTGTTGCA+TGG | + | chr5_3:1920497-1920516 | Msa0791070:CDS | 35.0% | |
| TGAAAAAGGAGCAACAGAAA+AGG | - | chr5_3:1920562-1920581 | None:intergenic | 35.0% | |
| ! | ATGGCAGTTCCAACTTTTTA+TGG | + | chr5_3:1920897-1920916 | Msa0791070:intron | 35.0% |
| TTAGAACCGCCATAAAAAGT+TGG | - | chr5_3:1920909-1920928 | None:intergenic | 35.0% | |
| CTACTCTAAATTTAGCGGAA+AGG | - | chr5_3:1921036-1921055 | None:intergenic | 35.0% | |
| GATTTAATGCACAGACAACT+AGG | - | chr5_3:1921067-1921086 | None:intergenic | 35.0% | |
| GTTGTCTGTGCATTAAATCA+TGG | + | chr5_3:1921068-1921087 | Msa0791070:intron | 35.0% | |
| TCTGTGCATTAAATCATGGA+TGG | + | chr5_3:1921072-1921091 | Msa0791070:intron | 35.0% | |
| !! | GAAATGAGTTTTTGGACGAA+AGG | + | chr5_3:1921191-1921210 | Msa0791070:intron | 35.0% |
| !! | AATGAGTTTTTGGACGAAAG+GGG | + | chr5_3:1921193-1921212 | Msa0791070:intron | 35.0% |
| GGTTAAATTTGAATCGTGAG+CGG | - | chr5_3:1921258-1921277 | None:intergenic | 35.0% | |
| !!! | TTCTCGGGGTAGTTTTAATT+TGG | - | chr5_3:1921279-1921298 | None:intergenic | 35.0% |
| ! | TCTTTGTTATCATAGCTGGT+TGG | - | chr5_3:1921624-1921643 | None:intergenic | 35.0% |
| ! | TGATGCATTTTCCACGTTTA+AGG | + | chr5_3:1922099-1922118 | Msa0791070:CDS | 35.0% |
| TTCAAATCTGACCTTAAACG+TGG | - | chr5_3:1922113-1922132 | None:intergenic | 35.0% | |
| !! | TTTGGATATGCTTGCTTTTC+AGG | + | chr5_3:1922205-1922224 | Msa0791070:intron | 35.0% |
| CAGTTGCATGTTTAGAAAGA+AGG | - | chr5_3:1922232-1922251 | None:intergenic | 35.0% | |
| ! | TATTTTCACCAAGGAGATCA+AGG | + | chr5_3:1922379-1922398 | Msa0791070:intron | 35.0% |
| ! | ATTTTCACCAAGGAGATCAA+GGG | + | chr5_3:1922380-1922399 | Msa0791070:intron | 35.0% |
| !!! | AAACGTTTGCTATTTTTCCG+CGG | - | chr5_3:1922628-1922647 | None:intergenic | 35.0% |
| ! | TTGTTTGTTAGCGGAAATCA+TGG | - | chr5_3:1922678-1922697 | None:intergenic | 35.0% |
| TGACCAACTTGCAATTGTAA+TGG | + | chr5_3:1922758-1922777 | Msa0791070:intron | 35.0% | |
| CATGTTCAAAGATGAGAGTA+GGG | - | chr5_3:1923079-1923098 | None:intergenic | 35.0% | |
| ACATGTTCAAAGATGAGAGT+AGG | - | chr5_3:1923080-1923099 | None:intergenic | 35.0% | |
| CATACTACGTACTCAATGAT+TGG | + | chr5_3:1923108-1923127 | Msa0791070:intron | 35.0% | |
| ! | TTAGAAAAGTGCGGGTATAA+CGG | - | chr5_3:1923151-1923170 | None:intergenic | 35.0% |
| CATCTCCTAATTATGTCACA+AGG | + | chr5_3:1923218-1923237 | Msa0791070:CDS | 35.0% | |
| AGTCATGATGACATTGTTGA+CGG | + | chr5_3:1923436-1923455 | Msa0791070:CDS | 35.0% | |
| TAGTGTATACTGCAGAAAAC+AGG | - | chr5_3:1923499-1923518 | None:intergenic | 35.0% | |
| ! | ATCAGCTTTCCACATTTTCA+AGG | + | chr5_3:1923642-1923661 | Msa0791070:CDS | 35.0% |
| ! | ATACAATGAGCTCATCCTTT+TGG | + | chr5_3:1923686-1923705 | Msa0791070:intron | 35.0% |
| CGCAGTTACATTTGATTAAC+GGG | - | chr5_3:1923744-1923763 | None:intergenic | 35.0% | |
| ! | TAGGATTAGCAACGAAAATC+TGG | - | chr5_3:1924044-1924063 | None:intergenic | 35.0% |
| ! | TAATTCTAGGGAAGAACAAG+GGG | + | chr5_3:1924085-1924104 | Msa0791070:CDS | 35.0% |
| AGAAGATGAGCAATTTGAAG+AGG | + | chr5_3:1924285-1924304 | Msa0791070:CDS | 35.0% | |
| TTGATGCAAGGATTTCATGT+TGG | + | chr5_3:1924422-1924441 | Msa0791070:three_prime_UTR | 35.0% | |
| ! | AAGGTCCATGAGTTTTTATG+TGG | + | chr5_3:1924470-1924489 | Msa0791070:three_prime_UTR | 35.0% |
| CTTGTCCACATAAAAACTCA+TGG | - | chr5_3:1924478-1924497 | None:intergenic | 35.0% | |
| ATTCGCTAAGATCTTGATAC+TGG | + | chr5_3:1924661-1924680 | Msa0791070:three_prime_UTR | 35.0% | |
| CATAGCAAATACCATCGAAG+TGG | - | chr5_3:1918905-1918924 | None:intergenic | 40.0% | |
| !! | CTTCGATGGTATTTGCTATG+TGG | + | chr5_3:1918905-1918924 | Msa0791070:five_prime_UTR | 40.0% |
| ATAGACTTGACAACTTCCTG+CGG | - | chr5_3:1919124-1919143 | None:intergenic | 40.0% | |
| ! | AGATGTGCCATTACTGAAGA+CGG | - | chr5_3:1919745-1919764 | None:intergenic | 40.0% |
| TTCAGTAATGGCACATCTGA+TGG | + | chr5_3:1919747-1919766 | Msa0791070:intron | 40.0% | |
| TAAAAAAGCTCGACTAGCGA+CGG | + | chr5_3:1919882-1919901 | Msa0791070:intron | 40.0% | |
| AAGTGCCATGTTTCATCCAA+GGG | - | chr5_3:1919923-1919942 | None:intergenic | 40.0% | |
| ! | AAAGTGCCATGTTTCATCCA+AGG | - | chr5_3:1919924-1919943 | None:intergenic | 40.0% |
| CATGACTTATATACCCACGA+CGG | - | chr5_3:1920003-1920022 | None:intergenic | 40.0% | |
| GATAACACTCAGGGCATATA+TGG | - | chr5_3:1920026-1920045 | None:intergenic | 40.0% | |
| ! | AGAACTATGCTTTCTGGAGA+TGG | + | chr5_3:1920187-1920206 | Msa0791070:CDS | 40.0% |
| ACAAGTTGCCTATACTTGGA+TGG | + | chr5_3:1920290-1920309 | Msa0791070:CDS | 40.0% | |
| CAAGTTGCCTATACTTGGAT+GGG | + | chr5_3:1920291-1920310 | Msa0791070:CDS | 40.0% | |
| CTTACTTCCCATCCAAGTAT+AGG | - | chr5_3:1920301-1920320 | None:intergenic | 40.0% | |
| ! | ATGCATGCAGTTGACTTAAC+TGG | + | chr5_3:1920344-1920363 | Msa0791070:intron | 40.0% |
| !! | GGGTGCATGAATTTTGATAC+AGG | + | chr5_3:1920378-1920397 | Msa0791070:intron | 40.0% |
| GAAAGGATTTAGTCCACTGT+TGG | + | chr5_3:1920404-1920423 | Msa0791070:CDS | 40.0% | |
| TCAACAATATCGTCCAACAG+TGG | - | chr5_3:1920420-1920439 | None:intergenic | 40.0% | |
| ! | AAAGGTGATGGCAACAGAAA+AGG | - | chr5_3:1920544-1920563 | None:intergenic | 40.0% |
| ACTGATGCTCTATGCCAAAT+TGG | + | chr5_3:1920630-1920649 | Msa0791070:intron | 40.0% | |
| CAGACTTCTTATCAGGAACA+AGG | - | chr5_3:1920696-1920715 | None:intergenic | 40.0% | |
| ! | GCAGTTCCAACTTTTTATGG+CGG | + | chr5_3:1920900-1920919 | Msa0791070:intron | 40.0% |
| ! | TTTTGGACGAAAGGGGATTT+TGG | + | chr5_3:1921200-1921219 | Msa0791070:intron | 40.0% |
| AAAACAGGGAGAGAGCAATT+AGG | - | chr5_3:1921743-1921762 | None:intergenic | 40.0% | |
| ATATACTGTGGTTGAGCTTG+AGG | + | chr5_3:1921843-1921862 | Msa0791070:intron | 40.0% | |
| GGGTGTTCTCAGATACATAT+TGG | + | chr5_3:1922015-1922034 | Msa0791070:intron | 40.0% | |
| TCAGATGCTACATCGAAGTT+AGG | - | chr5_3:1922082-1922101 | None:intergenic | 40.0% | |
| TTTGACAACTCACTACGATG+AGG | + | chr5_3:1922265-1922284 | Msa0791070:CDS | 40.0% | |
| ! | AATGGTGTTAAAGTGGCCAA+TGG | - | chr5_3:1922652-1922671 | None:intergenic | 40.0% |
| ! | ATGGAGGAATGGTGTTAAAG+TGG | - | chr5_3:1922659-1922678 | None:intergenic | 40.0% |
| TTTGTTAGCGGAAATCATGG+AGG | - | chr5_3:1922675-1922694 | None:intergenic | 40.0% | |
| GCACCATTACAATTGCAAGT+TGG | - | chr5_3:1922764-1922783 | None:intergenic | 40.0% | |
| TCTCAGAAAGAACGACTACT+CGG | - | chr5_3:1923040-1923059 | None:intergenic | 40.0% | |
| CTCATCTTTGAACATGTGCA+CGG | + | chr5_3:1923083-1923102 | Msa0791070:intron | 40.0% | |
| TACGTACTCAATGATTGGAG+TGG | + | chr5_3:1923113-1923132 | Msa0791070:intron | 40.0% | |
| CTCCTAATTATGTCACAAGG+AGG | + | chr5_3:1923221-1923240 | Msa0791070:CDS | 40.0% | |
| TGCCTCCTTGTGACATAATT+AGG | - | chr5_3:1923226-1923245 | None:intergenic | 40.0% | |
| CAGTCTATAAAGGTCTGTTC+TGG | + | chr5_3:1923244-1923263 | Msa0791070:intron | 40.0% | |
| CGCTTCATTATCTGAGCATT+GGG | - | chr5_3:1923389-1923408 | None:intergenic | 40.0% | |
| ACGCTTCATTATCTGAGCAT+TGG | - | chr5_3:1923390-1923409 | None:intergenic | 40.0% | |
| ACACAACACTAGCAGAAACA+AGG | - | chr5_3:1923533-1923552 | None:intergenic | 40.0% | |
| TCTGCTAGTGTTGTGTAACT+TGG | + | chr5_3:1923537-1923556 | Msa0791070:intron | 40.0% | |
| TTTACATCTCGCGGCTTATT+AGG | - | chr5_3:1924063-1924082 | None:intergenic | 40.0% | |
| CATAATCTATCTCCGGGAAA+AGG | + | chr5_3:1924126-1924145 | Msa0791070:CDS | 40.0% | |
| ! | AAAGCACAGTAACCTTTTCC+CGG | - | chr5_3:1924141-1924160 | None:intergenic | 40.0% |
| TCTGTGAGCAAGTAATGTGT+TGG | + | chr5_3:1924447-1924466 | Msa0791070:three_prime_UTR | 40.0% | |
| TGAGCAAGTAATGTGTTGGA+AGG | + | chr5_3:1924451-1924470 | Msa0791070:three_prime_UTR | 40.0% | |
| TTAGCTTCTCCTAATGGTGT+TGG | + | chr5_3:1924711-1924730 | Msa0791070:three_prime_UTR | 40.0% | |
| TAGCTTCTCCTAATGGTGTT+GGG | + | chr5_3:1924712-1924731 | Msa0791070:three_prime_UTR | 40.0% | |
| AATCTCAACCCAACACCATT+AGG | - | chr5_3:1924723-1924742 | None:intergenic | 40.0% | |
| CCATCGAAGTGGAAGAAAGA+AGG | - | chr5_3:1918894-1918913 | None:intergenic | 45.0% | |
| CCTTCTTTCTTCCACTTCGA+TGG | + | chr5_3:1918891-1918910 | Msa0791070:five_prime_UTR | 45.0% | |
| AGATCAGGTTTCACAGCTTG+TGG | + | chr5_3:1920228-1920247 | Msa0791070:CDS | 45.0% | |
| ACTTAACTGGTTGCTCATCG+TGG | + | chr5_3:1920357-1920376 | Msa0791070:intron | 45.0% | |
| CTTAACTGGTTGCTCATCGT+GGG | + | chr5_3:1920358-1920377 | Msa0791070:intron | 45.0% | |
| AGGAGCAACAGAAAAGGTGA+TGG | - | chr5_3:1920556-1920575 | None:intergenic | 45.0% | |
| AAAGAAATTGCCCTGAGCTC+TGG | + | chr5_3:1921639-1921658 | Msa0791070:CDS | 45.0% | |
| CAACATTATGCCAGAGCTCA+GGG | - | chr5_3:1921652-1921671 | None:intergenic | 45.0% | |
| ! | TGAGCTCTGGCATAATGTTG+CGG | + | chr5_3:1921652-1921671 | Msa0791070:CDS | 45.0% |
| TAGCGGAAATCATGGAGGAA+TGG | - | chr5_3:1922670-1922689 | None:intergenic | 45.0% | |
| AGCGTGAATGCACTCACAAT+TGG | - | chr5_3:1922811-1922830 | None:intergenic | 45.0% | |
| CACAAGGAGGCAGTCTATAA+AGG | + | chr5_3:1923234-1923253 | Msa0791070:CDS | 45.0% | |
| ! | GCTTCTCTCGGATTTTCTCT+TGG | + | chr5_3:1923358-1923377 | Msa0791070:intron | 45.0% |
| !! | AAAATAAATAAATAAAAACA+GGG | - | chr5_3:1921757-1921776 | None:intergenic | 5.0% |
| !! | AAAAATAAATAAATAAAAAC+AGG | - | chr5_3:1921758-1921777 | None:intergenic | 5.0% |
| !!! | TTTAGTTATTTTTTTTATTA+AGG | - | chr5_3:1922786-1922805 | None:intergenic | 5.0% |
| ! | ACAACTTCCTGCGGCGTTTT+AGG | - | chr5_3:1919115-1919134 | None:intergenic | 50.0% |
| GTTTGGGCCGTCTTCAGTAA+TGG | + | chr5_3:1919735-1919754 | Msa0791070:intron | 50.0% | |
| !! | AGCGACGGATACGTTTTAGC+CGG | + | chr5_3:1919897-1919916 | Msa0791070:intron | 50.0% |
| GTCATCAGTTTGTCCGTCGT+GGG | + | chr5_3:1919987-1920006 | Msa0791070:intron | 50.0% | |
| TCAGGTTTCACAGCTTGTGG+AGG | + | chr5_3:1920231-1920250 | Msa0791070:CDS | 50.0% | |
| GCTTGTGGAGGAAATCTGCA+AGG | + | chr5_3:1920243-1920262 | Msa0791070:CDS | 50.0% | |
| TGTGGAGGAAATCTGCAAGG+AGG | + | chr5_3:1920246-1920265 | Msa0791070:CDS | 50.0% | |
| GCAACATTATGCCAGAGCTC+AGG | - | chr5_3:1921653-1921672 | None:intergenic | 50.0% | |
| ! | GAGCTCTGGCATAATGTTGC+GGG | + | chr5_3:1921653-1921672 | Msa0791070:CDS | 50.0% |
| AAACAGGCCCTTGATCTCCT+TGG | - | chr5_3:1922390-1922409 | None:intergenic | 50.0% | |
| CGGATAGAAACTCCCAACAG+TGG | - | chr5_3:1922466-1922485 | None:intergenic | 50.0% | |
| TATTGCGAGAGATAGCTCCG+CGG | + | chr5_3:1922608-1922627 | Msa0791070:intron | 50.0% | |
| !! | GATACGTTTTAGCCGGCCCT+TGG | + | chr5_3:1919904-1919923 | Msa0791070:intron | 55.0% |
| GCCATGTTTCATCCAAGGGC+CGG | - | chr5_3:1919919-1919938 | None:intergenic | 55.0% | |
| CGTCATCAGTTTGTCCGTCG+TGG | + | chr5_3:1919986-1920005 | Msa0791070:intron | 55.0% | |
| GGAATGTCACACGATGACGC+AGG | - | chr5_3:1923478-1923497 | None:intergenic | 55.0% | |
| TTCGAGGCCTAAAACGCCGC+AGG | + | chr5_3:1919105-1919124 | Msa0791070:CDS | 60.0% | |
| GCCGGCCCTTGGATGAAACA+TGG | + | chr5_3:1919915-1919934 | Msa0791070:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 1918822 | 1924761 | 1918822 | ID=Msa0791070;Name=Msa0791070 |
| chr5_3 | mRNA | 1918822 | 1924761 | 1918822 | ID=Msa0791070-mRNA-1;Parent=Msa0791070;Name=Msa0791070-mRNA-1;_AED=0.15;_eAED=0.15;_QI=260|1|1|1|1|1|11|410|339 |
| chr5_3 | exon | 1918822 | 1919204 | 1918822 | ID=Msa0791070-mRNA-1:exon:748;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1920151 | 1920315 | 1920151 | ID=Msa0791070-mRNA-1:exon:749;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1920400 | 1920518 | 1920400 | ID=Msa0791070-mRNA-1:exon:750;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1921629 | 1921703 | 1921629 | ID=Msa0791070-mRNA-1:exon:751;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1922027 | 1922120 | 1922027 | ID=Msa0791070-mRNA-1:exon:752;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1922227 | 1922286 | 1922227 | ID=Msa0791070-mRNA-1:exon:753;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1923190 | 1923255 | 1923190 | ID=Msa0791070-mRNA-1:exon:754;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1923359 | 1923457 | 1923359 | ID=Msa0791070-mRNA-1:exon:755;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1923619 | 1923663 | 1923619 | ID=Msa0791070-mRNA-1:exon:756;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1924045 | 1924147 | 1924045 | ID=Msa0791070-mRNA-1:exon:757;Parent=Msa0791070-mRNA-1 |
| chr5_3 | exon | 1924281 | 1924761 | 1924281 | ID=Msa0791070-mRNA-1:exon:758;Parent=Msa0791070-mRNA-1 |
| chr5_3 | five_prime_UTR | 1918822 | 1919081 | 1918822 | ID=Msa0791070-mRNA-1:five_prime_utr;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1919082 | 1919204 | 1919082 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1920151 | 1920315 | 1920151 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1920400 | 1920518 | 1920400 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1921629 | 1921703 | 1921629 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1922027 | 1922120 | 1922027 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1922227 | 1922286 | 1922227 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1923190 | 1923255 | 1923190 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1923359 | 1923457 | 1923359 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1923619 | 1923663 | 1923619 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1924045 | 1924147 | 1924045 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | CDS | 1924281 | 1924351 | 1924281 | ID=Msa0791070-mRNA-1:cds;Parent=Msa0791070-mRNA-1 |
| chr5_3 | three_prime_UTR | 1924352 | 1924761 | 1924352 | ID=Msa0791070-mRNA-1:three_prime_utr;Parent=Msa0791070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
