AlfalfaGEDB | Msa0695410

M. sativa cultivar zhongmu-4 / Msa0695410

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
PFAM: PF03110.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0695410	RHN62398.1	96.429	140	4	1	1	139	11	150	6.91e-91	270

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0695410	sp\|Q38741\|SBP1_ANTMA	56.835	139	50	2	1	139	1	129	2.09e-45	147

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0695410	A0A396IC84	96.429	140	4	1	1	139	11	150	3.30e-91	270

TFs/TRs:

Gene ID	Type	Classification
Msa0695410	TF	SBP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0029020	Msa0695410	-0.804659	1.942935e-49	-8.615850e-47
Msa0035110	Msa0695410	0.818856	1.575251e-52	-8.615850e-47
Msa0045650	Msa0695410	0.801259	9.795113e-49	-8.615850e-47
Msa0653020	Msa0695410	0.839080	1.962277e-57	-8.615850e-47
Msa0695410	Msa0701770	0.815288	9.980925e-52	-8.615850e-47
Msa0695410	Msa0715310	0.817673	2.919205e-52	-8.615850e-47
Msa0695410	Msa0722930	0.829427	5.179120e-55	-8.615850e-47
Msa0695410	Msa0723140	0.835204	1.922150e-56	-8.615850e-47
Msa0695410	Msa0725480	-0.801543	8.567880e-49	-8.615850e-47
Msa0695410	Msa0748610	0.818905	1.535491e-52	-8.615850e-47
Msa0695410	Msa0749550	0.811049	8.501055e-51	-8.615850e-47
Msa0695410	Msa0749610	0.817618	3.004197e-52	-8.615850e-47
Msa0695410	Msa0766100	-0.810430	1.157265e-50	-8.615850e-47
Msa0695410	Msa0773610	0.838183	3.346030e-57	-8.615850e-47
Msa0695410	Msa0811000	0.807468	4.981569e-50	-8.615850e-47
Msa0695410	Msa0836680	0.821914	3.133717e-53	-8.615850e-47
Msa0695410	Msa0837990	0.844927	5.581512e-59	-8.615850e-47
Msa0695410	Msa0843280	0.803356	3.625705e-49	-8.615850e-47
Msa0695410	Msa0894890	0.807927	3.979443e-50	-8.615850e-47
Msa0695410	Msa0946120	0.801183	1.015251e-48	-8.615850e-47
Msa0695410	Msa0951720	0.827789	1.288654e-54	-8.615850e-47
Msa0695410	Msa0981010	0.831996	1.216236e-55	-8.615850e-47
Msa0695410	Msa1021770	0.809675	1.682804e-50	-8.615850e-47
Msa0695410	Msa1044090	0.816857	4.453867e-52	-8.615850e-47
Msa0695410	Msa1128160	0.801087	1.062580e-48	-8.615850e-47
Msa0695410	Msa1133660	0.805925	1.054783e-49	-8.615850e-47
Msa0695410	Msa1159360	0.801859	7.378813e-49	-8.615850e-47
Msa0695410	Msa1165360	0.804964	1.677410e-49	-8.615850e-47
Msa0695410	Msa1204980	-0.805657	1.201042e-49	-8.615850e-47
Msa0695410	Msa1205010	-0.809354	1.972379e-50	-8.615850e-47
Msa0695410	Msa1207480	-0.813775	2.157681e-51	-8.615850e-47
Msa0695410	Msa1256540	-0.805431	1.339447e-49	-8.615850e-47
Msa0695410	Msa1265960	0.826735	2.304528e-54	-8.615850e-47
Msa0695410	Msa1271280	0.815608	8.472839e-52	-8.615850e-47
Msa0695410	Msa1296960	-0.814227	1.715361e-51	-8.615850e-47
Msa0695410	Msa1335770	0.805576	1.248725e-49	-8.615850e-47
Msa0695410	Msa1335970	-0.803244	3.824621e-49	-8.615850e-47
Msa0695410	Msa1342430	0.814189	1.748980e-51	-8.615850e-47
Msa0695410	Msa1371830	0.800626	1.319407e-48	-8.615850e-47
Msa0695410	Msa1376340	0.802875	4.557812e-49	-8.615850e-47
Msa0695410	Msa1431000	0.821055	4.947930e-53	-8.615850e-47
Msa0695410	Msa1460890	0.822993	1.759857e-53	-8.615850e-47
Msa0156650	Msa0695410	-0.802955	4.388707e-49	-8.615850e-47
Msa0164360	Msa0695410	0.804066	2.581846e-49	-8.615850e-47
Msa0165430	Msa0695410	0.811776	5.910109e-51	-8.615850e-47
Msa0175920	Msa0695410	0.816829	4.520162e-52	-8.615850e-47
Msa0185640	Msa0695410	-0.811071	8.410578e-51	-8.615850e-47
Msa0192200	Msa0695410	0.820843	5.536266e-53	-8.615850e-47
Msa0192320	Msa0695410	0.813932	1.993012e-51	-8.615850e-47
Msa0201330	Msa0695410	0.813112	3.017928e-51	-8.615850e-47
Msa0201370	Msa0695410	0.840901	6.575429e-58	-8.615850e-47
Msa0208390	Msa0695410	0.814175	1.761493e-51	-8.615850e-47
Msa0414070	Msa0695410	0.807364	5.241654e-50	-8.615850e-47
Msa0418000	Msa0695410	0.813844	2.083750e-51	-8.615850e-47
Msa0423360	Msa0695410	-0.807474	4.965434e-50	-8.615850e-47
Msa0458790	Msa0695410	0.808102	3.652868e-50	-8.615850e-47
Msa0459770	Msa0695410	-0.811632	6.352911e-51	-8.615850e-47
Msa0243910	Msa0695410	0.821215	4.545575e-53	-8.615850e-47
Msa0243930	Msa0695410	0.826436	2.715959e-54	-8.615850e-47
Msa0258670	Msa0695410	-0.810545	1.093056e-50	-8.615850e-47
Msa0269360	Msa0695410	0.808935	2.425485e-50	-8.615850e-47
Msa0275670	Msa0695410	0.818686	1.722036e-52	-8.615850e-47
Msa0282590	Msa0695410	0.823708	1.197515e-53	-8.615850e-47
Msa0301280	Msa0695410	0.812331	4.474760e-51	-8.615850e-47
Msa0304740	Msa0695410	0.805584	1.243699e-49	-8.615850e-47
Msa0331590	Msa0695410	0.802198	6.285788e-49	-8.615850e-47
Msa0342340	Msa0695410	-0.811394	7.157741e-51	-8.615850e-47
Msa0511720	Msa0695410	-0.805190	1.504527e-49	-8.615850e-47
Msa0557680	Msa0695410	0.843125	1.698622e-58	-8.615850e-47
Msa0577620	Msa0695410	0.811842	5.719681e-51	-8.615850e-47
Msa0577630	Msa0695410	0.800979	1.117575e-48	-8.615850e-47
Msa0583590	Msa0695410	0.801534	8.603604e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0695410	MtrunA17_Chr4g0046991	96.429	140	4	1	1	139	11	150	6.36e-95	270
Msa0695410	MtrunA17_Chr2g0282521	73.585	106	25	2	33	137	36	139	8.17e-49	153
Msa0695410	MtrunA17_Chr8g0360361	76.923	78	18	0	59	136	62	139	3.01e-42	138
Msa0695410	MtrunA17_Chr7g0231911	75.641	78	19	0	62	139	149	226	2.44e-37	129
Msa0695410	MtrunA17_Chr8g0334671	59.821	112	38	2	27	136	155	261	1.11e-36	127
Msa0695410	MtrunA17_Chr7g0258471	72.727	77	21	0	59	135	139	215	4.32e-36	127
Msa0695410	MtrunA17_Chr5g0420051	60.215	93	34	1	50	139	166	258	9.25e-35	124
Msa0695410	MtrunA17_Chr4g0061651	72.973	74	20	0	62	135	123	196	9.98e-34	122
Msa0695410	MtrunA17_Chr3g0122411	58.696	92	38	0	44	135	147	238	1.78e-33	121
Msa0695410	MtrunA17_Chr7g0224821	60.674	89	33	1	47	135	64	150	1.14e-32	118
Msa0695410	MtrunA17_Chr3g0132091	56.436	101	40	1	39	135	46	146	2.31e-32	117
Msa0695410	MtrunA17_Chr1g0194121	62.921	89	33	0	48	136	133	221	3.81e-32	119
Msa0695410	MtrunA17_Chr2g0308321	67.532	77	25	0	62	138	171	247	5.12e-32	118
Msa0695410	MtrunA17_Chr2g0302791	61.290	93	32	1	48	136	121	213	5.21e-32	119
Msa0695410	MtrunA17_Chr7g0270541	62.637	91	34	0	46	136	129	219	6.63e-32	119
Msa0695410	MtrunA17_Chr1g0162871	68.750	80	25	0	60	139	102	181	7.16e-32	119
Msa0695410	MtrunA17_Chr8g0377421	53.043	115	46	2	29	135	91	205	4.15e-30	110
Msa0695410	MtrunA17_Chr8g0377401	64.474	76	27	0	59	134	159	234	1.55e-29	107
Msa0695410	MtrunA17_Chr8g0386271	67.568	74	24	0	62	135	99	172	2.38e-29	109
Msa0695410	MtrunA17_Chr2g0286661	56.410	78	34	0	62	139	103	180	3.81e-24	96.7
Msa0695410	MtrunA17_Chr2g0317041	67.347	49	16	0	60	108	97	145	1.27e-19	79.3
Msa0695410	MtrunA17_Chr1g0175031	62.963	54	20	0	55	108	67	120	1.06e-18	76.6
Msa0695410	MtrunA17_Chr8g0377431	55.357	56	25	0	60	115	149	204	2.76e-15	69.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0695410	AT2G33810.1	69.792	96	26	1	44	139	39	131	7.22e-44	140
Msa0695410	AT1G53160.3	67.391	92	27	1	46	137	41	129	3.07e-38	127
Msa0695410	AT1G53160.2	67.391	92	27	1	46	137	41	129	3.10e-38	128
Msa0695410	AT1G53160.1	67.391	92	27	1	46	137	41	129	3.10e-38	128
Msa0695410	AT1G69170.1	66.304	92	28	1	50	138	109	200	2.70e-36	129
Msa0695410	AT3G15270.1	70.513	78	23	0	62	139	63	140	6.39e-36	122
Msa0695410	AT3G60030.1	62.366	93	35	0	47	139	112	204	1.12e-34	127
Msa0695410	AT1G02065.1	62.245	98	35	1	40	135	164	261	1.35e-34	122
Msa0695410	AT2G47070.1	72.368	76	21	0	61	136	105	180	3.82e-34	125
Msa0695410	AT5G43270.3	53.982	113	47	1	28	135	130	242	9.81e-33	119
Msa0695410	AT5G43270.1	53.982	113	47	1	28	135	130	242	9.81e-33	119
Msa0695410	AT5G43270.2	53.982	113	47	1	28	135	130	242	9.81e-33	119
Msa0695410	AT1G27360.2	56.701	97	42	0	39	135	152	248	1.12e-32	119
Msa0695410	AT1G27360.1	56.701	97	42	0	39	135	152	248	1.12e-32	119
Msa0695410	AT1G27360.3	56.701	97	42	0	39	135	152	248	1.12e-32	119
Msa0695410	AT1G27360.4	56.701	97	42	0	39	135	152	248	1.12e-32	119
Msa0695410	AT1G20980.1	71.429	77	22	0	60	136	118	194	1.51e-32	121
Msa0695410	AT1G27370.6	53.125	96	45	0	40	135	154	249	1.71e-32	117
Msa0695410	AT2G42200.1	68.421	76	24	0	60	135	72	147	3.91e-32	117
Msa0695410	AT1G27370.1	53.125	96	45	0	40	135	154	249	6.20e-32	117
Msa0695410	AT1G27370.5	53.125	96	45	0	40	135	154	249	6.20e-32	117
Msa0695410	AT1G27370.3	53.125	96	45	0	40	135	154	249	6.20e-32	117
Msa0695410	AT1G27370.2	53.125	96	45	0	40	135	154	249	6.20e-32	117
Msa0695410	AT1G27370.4	53.125	96	45	0	40	135	154	249	6.20e-32	117
Msa0695410	AT1G27370.7	53.125	96	45	0	40	135	154	249	6.20e-32	117
Msa0695410	AT5G50570.1	62.500	80	30	0	56	135	95	174	1.24e-31	115
Msa0695410	AT5G50570.2	62.500	80	30	0	56	135	95	174	1.24e-31	115
Msa0695410	AT5G50670.1	62.500	80	30	0	56	135	95	174	1.24e-31	115
Msa0695410	AT5G50670.2	62.500	80	30	0	56	135	95	174	1.24e-31	115
Msa0695410	AT1G76580.3	68.750	80	25	0	60	139	112	191	5.31e-31	116
Msa0695410	AT1G76580.2	68.750	80	25	0	60	139	112	191	5.65e-31	116
Msa0695410	AT1G76580.1	68.750	80	25	0	60	139	112	191	8.51e-31	116
Msa0695410	AT3G57920.1	56.075	107	38	2	29	135	35	132	1.61e-29	110
Msa0695410	AT5G18830.1	52.564	78	37	0	62	139	138	215	1.66e-22	92.4
Msa0695410	AT5G18830.2	52.564	78	37	0	62	139	138	215	1.72e-22	92.4
Msa0695410	AT5G18830.3	52.564	78	37	0	62	139	138	215	1.82e-22	92.4
Msa0695410	AT1G02065.2	56.944	72	29	1	40	109	164	235	3.33e-20	83.6
Msa0695410	AT2G47070.2	70.000	50	15	0	87	136	2	51	1.65e-18	80.9

Find 45 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTTCAGACATTAATTAATA+AGG	0.262444	4_4:-64933995	Msa0695410:three_prime_UTR
AAGAGGAAGAGGATGGTAGA+AGG	0.346008	4_4:-64938112	Msa0695410:CDS
TCGTATGTTGCTGGTCTCTA+AGG	0.358783	4_4:-64933937	Msa0695410:three_prime_UTR
TGAGGAGGAAGAAGAGGAAG+AGG	0.391649	4_4:-64938147	Msa0695410:CDS
GCACCTGCCGTACACATTAC+AGG	0.392224	4_4:-64937933	Msa0695410:CDS
TCAAGCCCTTCGTATGTTGC+TGG	0.396432	4_4:-64933946	Msa0695410:three_prime_UTR
AAGAAGTTGCAGAAGGCGTT+TGG	0.399194	4_4:-64934066	Msa0695410:CDS
CTCCATAGTTTCAAGGGAAA+AGG	0.430816	4_4:+64938217	None:intergenic
TTCTTGGCTCCATAGTTTCA+AGG	0.435706	4_4:+64938210	None:intergenic
GGAAGAAGAGGAAGAGGATA+CGG	0.438830	4_4:-64938141	Msa0695410:CDS
AGTTGCAGAAGGCGTTTGGC+TGG	0.439917	4_4:-64934062	Msa0695410:CDS
AAGAGGATGGTAGAAGGAAG+AGG	0.452598	4_4:-64938106	Msa0695410:CDS
GCAATATCACCGGAGGCATA+AGG	0.462023	4_4:-64937976	Msa0695410:CDS
CATGATTGAAACAAAATCTC+AGG	0.492267	4_4:-64933970	Msa0695410:three_prime_UTR
GGATCATGAGGAGGAAGAAG+AGG	0.499097	4_4:-64938153	Msa0695410:CDS
AGAGGATGGTAGAAGGAAGA+GGG	0.504666	4_4:-64938105	Msa0695410:CDS
AAACTCAAACTATTCATATG+AGG	0.504948	4_4:+64938285	None:intergenic
AATGTGTACGGCAGGTGCTT+TGG	0.505419	4_4:+64937938	None:intergenic
ACATTACAGGATTGCAGCAA+AGG	0.512816	4_4:-64937920	Msa0695410:CDS
TATTCCACCTTGTTGTCAAG+TGG	0.526109	4_4:-64938030	Msa0695410:CDS
CATCAAATTCAGATAGTCCA+TGG	0.531989	4_4:+64934096	None:intergenic
GTTGCAGAAGGCGTTTGGCT+GGG	0.534230	4_4:-64934061	Msa0695410:CDS
TCTTGGCTCCATAGTTTCAA+GGG	0.551465	4_4:+64938211	None:intergenic
TTGAAACTATGGAGCCAAGA+AGG	0.558429	4_4:-64938208	Msa0695410:exon
ACTCACAGACCTTATGCCTC+CGG	0.564755	4_4:+64937967	None:intergenic
ATAACTTTCTCCGAAATCCA+AGG	0.571632	4_4:-64933748	Msa0695410:three_prime_UTR
CAATTCTCCACTTGACAACA+AGG	0.571704	4_4:+64938023	None:intergenic
TGACAGAAGATAGAGAGCAT+TGG	0.573723	4_4:+64933909	None:intergenic
TCGCAAAAGTGCAATTGACT+AGG	0.574247	4_4:-64934024	Msa0695410:exon
GTTTGGCTGGGCATAATGAG+AGG	0.586510	4_4:-64934049	Msa0695410:CDS
AATAAGTTTGAAGTACAAAG+AGG	0.596272	4_4:-64938174	Msa0695410:CDS
CTCAAACTATTCATATGAGG+AGG	0.599476	4_4:+64938288	None:intergenic
CTGCAATCCTGTAATGTGTA+CGG	0.600361	4_4:+64937926	None:intergenic
TATGGAGCCAAGAAGGTCAG+AGG	0.627805	4_4:-64938201	Msa0695410:CDS
AATCCTGTAATGTGTACGGC+AGG	0.629458	4_4:+64937930	None:intergenic
ATGGAGCCAAGAAGGTCAGA+GGG	0.629985	4_4:-64938200	Msa0695410:CDS
GTCAGAGAGATCTAGAAACA+AGG	0.633465	4_4:+64938239	None:intergenic
GTACAAAGAGGATCATGAGG+AGG	0.636625	4_4:-64938162	Msa0695410:CDS
GTGAAGCTAAGCAATATCAC+CGG	0.638561	4_4:-64937986	Msa0695410:CDS
GAAGTACAAAGAGGATCATG+AGG	0.643502	4_4:-64938165	Msa0695410:CDS
TAACTTTCTCCGAAATCCAA+GGG	0.652097	4_4:-64933747	Msa0695410:three_prime_UTR
TAGAGACCAGCAACATACGA+AGG	0.660132	4_4:+64933940	None:intergenic
AGAGACCAGCAACATACGAA+GGG	0.664972	4_4:+64933941	None:intergenic
AAGCTAAGCAATATCACCGG+AGG	0.689023	4_4:-64937983	Msa0695410:CDS
TTCTCCACTTGACAACAAGG+TGG	0.724295	4_4:+64938026	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTTTAATATTAAAAAA+AGG	-	chr4_4:64935689-64935708	Msa0695410:intron	0.0%
!!!	TATATATAAGAATAGTTTTA+TGG	-	chr4_4:64933697-64933716	Msa0695410:three_prime_UTR	10.0%
!!!	AAATATTTAATTAGTTGATA+TGG	+	chr4_4:64935497-64935516	None:intergenic	10.0%
!!	ATTAAAAAAATTGTGTATAA+GGG	+	chr4_4:64935680-64935699	None:intergenic	10.0%
!!	TATTAAAAAAATTGTGTATA+AGG	+	chr4_4:64935681-64935700	None:intergenic	10.0%
!!!	AAAAATAGTAACTTTTATAT+TGG	-	chr4_4:64935969-64935988	Msa0695410:intron	10.0%
!!	ATTTACACTAAAAATATAAT+GGG	+	chr4_4:64936115-64936134	None:intergenic	10.0%
!!	AATTTACACTAAAAATATAA+TGG	+	chr4_4:64936116-64936135	None:intergenic	10.0%
!!!	AATTATAAATTTTTTGCATT+AGG	+	chr4_4:64936378-64936397	None:intergenic	10.0%
!!!	AATTATAGTTTTAATAATAG+TGG	-	chr4_4:64936407-64936426	Msa0695410:intron	10.0%
!!!	TAAAATTTTAGATAAAAATG+CGG	+	chr4_4:64936965-64936984	None:intergenic	10.0%
!!	TTGTAAAAATAAAAATATCA+TGG	-	chr4_4:64937740-64937759	Msa0695410:intron	10.0%
!!!	ATTTGTTATTAAAAAAAAGT+CGG	+	chr4_4:64937845-64937864	None:intergenic	10.0%
!!	AATTTACTTAAAAGAGATTA+GGG	+	chr4_4:64934157-64934176	None:intergenic	15.0%
!!	AAATTTACTTAAAAGAGATT+AGG	+	chr4_4:64934158-64934177	None:intergenic	15.0%
!!	TAACAAAATATATATGTACT+TGG	+	chr4_4:64934578-64934597	None:intergenic	15.0%
!!!	TATTTCCATAATTTTTCTTT+TGG	-	chr4_4:64934599-64934618	Msa0695410:intron	15.0%
!!	AAAATCCAAAAGAAAAATTA+TGG	+	chr4_4:64934607-64934626	None:intergenic	15.0%
!!!	CTACATCAAATATTTTTTTT+TGG	-	chr4_4:64934852-64934871	Msa0695410:intron	15.0%
!!	ATTTGATCATTAATCAATTA+AGG	-	chr4_4:64935558-64935577	Msa0695410:intron	15.0%
!!	TTATTATGATATCATTATGT+GGG	+	chr4_4:64935632-64935651	None:intergenic	15.0%
!!	TTTATTATGATATCATTATG+TGG	+	chr4_4:64935633-64935652	None:intergenic	15.0%
!!	ATGAGTATTAGAAAAAAAAA+AGG	-	chr4_4:64935794-64935813	Msa0695410:intron	15.0%
!!	TGAGTATTAGAAAAAAAAAA+GGG	-	chr4_4:64935795-64935814	Msa0695410:intron	15.0%
!!!	TTTTAGTCACTAATTATATT+TGG	-	chr4_4:64935905-64935924	Msa0695410:intron	15.0%
!!	AATAAAAAATCAGCAAAAAT+GGG	+	chr4_4:64936216-64936235	None:intergenic	15.0%
!!	AAATAAAAAATCAGCAAAAA+TGG	+	chr4_4:64936217-64936236	None:intergenic	15.0%
!!!	TGAATTTCTGTTATTATTTT+TGG	-	chr4_4:64936311-64936330	Msa0695410:intron	15.0%
!!!	AATTATAAACACTATTTTTG+TGG	-	chr4_4:64936807-64936826	Msa0695410:intron	15.0%
!!	TCAATTAGTAAATTATCTTA+AGG	+	chr4_4:64937286-64937305	None:intergenic	15.0%
!!!	ATTTGATATATTTTGTTAGT+GGG	+	chr4_4:64937413-64937432	None:intergenic	15.0%
!!!	TATTTGATATATTTTGTTAG+TGG	+	chr4_4:64937414-64937433	None:intergenic	15.0%
!!	ATAGTAACAAAAAAAAACAA+GGG	-	chr4_4:64937549-64937568	Msa0695410:intron	15.0%
!!!	TATATGTATTATTTTTTGTC+GGG	+	chr4_4:64937641-64937660	None:intergenic	15.0%
!!!	GTATATGTATTATTTTTTGT+CGG	+	chr4_4:64937642-64937661	None:intergenic	15.0%
!!!	TTTGTTATTAAAAAAAAGTC+GGG	+	chr4_4:64937844-64937863	None:intergenic	15.0%
!!	ATTTCAGACATTAATTAATA+AGG	-	chr4_4:64938022-64938041	Msa0695410:CDS	15.0%
!!!	ACTTTTGTCTAAAAAAATCA+GGG	-	chr4_4:64934273-64934292	Msa0695410:intron	20.0%
!!	ATGAAAATTGTATCACTATT+TGG	+	chr4_4:64934333-64934352	None:intergenic	20.0%
!!!	AGTACTAGTTTTTTTATGAT+TGG	-	chr4_4:64934471-64934490	Msa0695410:intron	20.0%
!!!	ATGGAAATTTTGATATGTAA+CGG	-	chr4_4:64935041-64935060	Msa0695410:intron	20.0%
!!	ACATTGAATATGATTATGAT+CGG	-	chr4_4:64935186-64935205	Msa0695410:intron	20.0%
!!!	TTTTATATTGGATGATCATT+AGG	-	chr4_4:64935420-64935439	Msa0695410:intron	20.0%
!!	ATTTCTCATTATTCCATTAA+TGG	-	chr4_4:64935443-64935462	Msa0695410:intron	20.0%
!!	TTTCTCATTATTCCATTAAT+GGG	-	chr4_4:64935444-64935463	Msa0695410:intron	20.0%
!!	TTAGTGACTAAAATTAGAAA+TGG	+	chr4_4:64935898-64935917	None:intergenic	20.0%
!!!	AGACAAAATTTCTTTTTTGT+AGG	-	chr4_4:64936037-64936056	Msa0695410:intron	20.0%
!!!	TATCATAAGGATGTTATTTA+AGG	+	chr4_4:64936079-64936098	None:intergenic	20.0%
!!!	AATTTTAAGACATTGAGTTT+AGG	-	chr4_4:64936978-64936997	Msa0695410:intron	20.0%
!!	AATTGCAATATATAAAGGTT+GGG	+	chr4_4:64937230-64937249	None:intergenic	20.0%
!!	AAATTGCAATATATAAAGGT+TGG	+	chr4_4:64937231-64937250	None:intergenic	20.0%
!!!	TTTGATATATTTTGTTAGTG+GGG	+	chr4_4:64937412-64937431	None:intergenic	20.0%
!!	GATAGTAACAAAAAAAAACA+AGG	-	chr4_4:64937548-64937567	Msa0695410:intron	20.0%
!!	TAGTAACAAAAAAAAACAAG+GGG	-	chr4_4:64937550-64937569	Msa0695410:intron	20.0%
!!!	TTCTCTAACATTTTCATATT+AGG	-	chr4_4:64937664-64937683	Msa0695410:intron	20.0%
!!	TAAGAATTAAGTAATCTTTC+TGG	-	chr4_4:64937690-64937709	Msa0695410:intron	20.0%
!!!	AGTTTTTTTTTTCTTTCAGT+TGG	-	chr4_4:64937772-64937791	Msa0695410:intron	20.0%
!!!	AATTTTTTCATGACCTAATT+TGG	+	chr4_4:64937801-64937820	None:intergenic	20.0%
!	AAACTCAAACTATTCATATG+AGG	+	chr4_4:64933735-64933754	None:intergenic	25.0%
!!	AATAAGTTTGAAGTACAAAG+AGG	-	chr4_4:64933843-64933862	Msa0695410:three_prime_UTR	25.0%
!	ATGTGAAATATTCTTGTTGA+GGG	-	chr4_4:64934233-64934252	Msa0695410:intron	25.0%
!!	CACTTTTGTCTAAAAAAATC+AGG	-	chr4_4:64934272-64934291	Msa0695410:intron	25.0%
!!!	ACTAGTTTTTTTATGATTGG+AGG	-	chr4_4:64934474-64934493	Msa0695410:intron	25.0%
!!	TTATTACTGTTCAAAGTGTT+TGG	+	chr4_4:64934638-64934657	None:intergenic	25.0%
!!!	ATGATTTCGTTTTTAGAAAG+AGG	-	chr4_4:64934684-64934703	Msa0695410:intron	25.0%
!!!	CACAGATGGATTATATTTTA+GGG	-	chr4_4:64934791-64934810	Msa0695410:intron	25.0%
!!!	ACAGATGGATTATATTTTAG+GGG	-	chr4_4:64934792-64934811	Msa0695410:intron	25.0%
!!!	TCAAATATTTTTTTTTGGCC+AGG	-	chr4_4:64934857-64934876	Msa0695410:intron	25.0%
!	GCTTTATAATGTGAATAAGT+GGG	-	chr4_4:64934900-64934919	Msa0695410:intron	25.0%
!	CTTTATAATGTGAATAAGTG+GGG	-	chr4_4:64934901-64934920	Msa0695410:intron	25.0%
!	GACACATCAAATCTTTATTA+TGG	-	chr4_4:64934994-64935013	Msa0695410:intron	25.0%
!	GGTTTATATGTTACATGTTT+AGG	-	chr4_4:64935062-64935081	Msa0695410:intron	25.0%
!!	GACTATAGCTTCTTTTATAT+TGG	-	chr4_4:64935408-64935427	Msa0695410:intron	25.0%
!!	ATACCCAAGATTTTCAATTT+GGG	+	chr4_4:64935733-64935752	None:intergenic	25.0%
!!	TATACCCAAGATTTTCAATT+TGG	+	chr4_4:64935734-64935753	None:intergenic	25.0%
!!!	TTAGTTTTGAGAATTTACCA+GGG	+	chr4_4:64935775-64935794	None:intergenic	25.0%
!!!	ATTAGTTTTGAGAATTTACC+AGG	+	chr4_4:64935776-64935795	None:intergenic	25.0%
!	TATTTAAGGAACCTACAAAA+AGG	+	chr4_4:64936065-64936084	None:intergenic	25.0%
!!	TTTTGCTAACAAGTATCATA+AGG	+	chr4_4:64936092-64936111	None:intergenic	25.0%
!	TAGTCAAGAATGTTATAGTA+TGG	+	chr4_4:64936189-64936208	None:intergenic	25.0%
!	TACTATAACATTCTTGACTA+AGG	-	chr4_4:64936189-64936208	Msa0695410:intron	25.0%
!	CAATGAAAAAGTTTCTACAA+CGG	-	chr4_4:64936514-64936533	Msa0695410:intron	25.0%
!!!	AAATTCAACCTCATTTTTGT+TGG	-	chr4_4:64936877-64936896	Msa0695410:intron	25.0%
!	TTGATCAATATACAAGTGAA+AGG	+	chr4_4:64937007-64937026	None:intergenic	25.0%
!!!	GTTCTAAATTGCTGATTTTT+GGG	+	chr4_4:64937110-64937129	None:intergenic	25.0%
!!	ATTACCTTATGAGTTTTTCT+CGG	+	chr4_4:64937135-64937154	None:intergenic	25.0%
!	ATTGCAATATATAAAGGTTG+GGG	+	chr4_4:64937229-64937248	None:intergenic	25.0%
!!!	ATTGAGTTGAATTTGTTGTT+TGG	-	chr4_4:64937338-64937357	Msa0695410:intron	25.0%
!!!	TTGAGTTGAATTTGTTGTTT+GGG	-	chr4_4:64937339-64937358	Msa0695410:intron	25.0%
!!!	ATTTTTTGTCGGGATTAAAT+TGG	+	chr4_4:64937631-64937650	None:intergenic	25.0%
!!!	ATATTTTGTTTCAGATTCCA+TGG	-	chr4_4:64937904-64937923	Msa0695410:CDS	25.0%
	AGGTTCTCTCAAAAAAAATG+TGG	+	chr4_4:64933761-64933780	None:intergenic	30.0%
	GATGTGAAATATTCTTGTTG+AGG	-	chr4_4:64934232-64934251	Msa0695410:intron	30.0%
	GTTGATGTTGGCATAATAAA+AGG	+	chr4_4:64934373-64934392	None:intergenic	30.0%
	CCGTTGTTTAAACACAAAAA+CGG	+	chr4_4:64934432-64934451	None:intergenic	30.0%
!!	CCGTTTTTGTGTTTAAACAA+CGG	-	chr4_4:64934429-64934448	Msa0695410:intron	30.0%
!!!	AGTTTTTTTATGATTGGAGG+TGG	-	chr4_4:64934477-64934496	Msa0695410:intron	30.0%
!!	TTTCGTTTTTAGAAAGAGCA+AGG	-	chr4_4:64934722-64934741	Msa0695410:intron	30.0%
!!!	GCACAGATGGATTATATTTT+AGG	-	chr4_4:64934790-64934809	Msa0695410:intron	30.0%
	CGCTTTATAATGTGAATAAG+TGG	-	chr4_4:64934899-64934918	Msa0695410:intron	30.0%
	ACAACGCATTATTATATGCA+GGG	+	chr4_4:64934949-64934968	None:intergenic	30.0%
!!	ATTATGGAGTAGTTTGTTGT+TGG	-	chr4_4:64935010-64935029	Msa0695410:intron	30.0%
!!	TTATGGAGTAGTTTGTTGTT+GGG	-	chr4_4:64935011-64935030	Msa0695410:intron	30.0%
!	GTTTCATTGTTGTTGAAAGA+GGG	+	chr4_4:64935250-64935269	None:intergenic	30.0%
!	TGTTTCATTGTTGTTGAAAG+AGG	+	chr4_4:64935251-64935270	None:intergenic	30.0%
!	AACTTCAGACATAAAGGTAT+CGG	+	chr4_4:64935339-64935358	None:intergenic	30.0%
	ACATGATTTATTGCTGTGTA+CGG	-	chr4_4:64935376-64935395	Msa0695410:intron	30.0%
	AACTCCCAAATTGAAAATCT+TGG	-	chr4_4:64935726-64935745	Msa0695410:intron	30.0%
	ACTCCCAAATTGAAAATCTT+GGG	-	chr4_4:64935727-64935746	Msa0695410:intron	30.0%
	TGAGTTCTTCACTAACTTTA+GGG	+	chr4_4:64935869-64935888	None:intergenic	30.0%
	ATGAGTTCTTCACTAACTTT+AGG	+	chr4_4:64935870-64935889	None:intergenic	30.0%
!	TTTTGTAGGTTCCTTTTTGT+AGG	-	chr4_4:64936051-64936070	Msa0695410:intron	30.0%
!!	TTGAGAGTGATTGTTATTTG+AGG	-	chr4_4:64936430-64936449	Msa0695410:intron	30.0%
	AAAGTTTCTACAACGGTTAA+AGG	-	chr4_4:64936521-64936540	Msa0695410:intron	30.0%
!!	TCATTTTTGTTGGATCATGT+GGG	-	chr4_4:64936887-64936906	Msa0695410:intron	30.0%
!!!	GGTTCTAAATTGCTGATTTT+TGG	+	chr4_4:64937111-64937130	None:intergenic	30.0%
	GGGGAAATTGCAATATATAA+AGG	+	chr4_4:64937235-64937254	None:intergenic	30.0%
!!	TGAGTTGAATTTGTTGTTTG+GGG	-	chr4_4:64937340-64937359	Msa0695410:intron	30.0%
	GTACATGATCAAGAAGTAAT+CGG	+	chr4_4:64937587-64937606	None:intergenic	30.0%
	TTCTTGATCATGTACATATC+TGG	-	chr4_4:64937592-64937611	Msa0695410:intron	30.0%
	TTTCAGTTGGAAACCAAATT+AGG	-	chr4_4:64937785-64937804	Msa0695410:intron	30.0%
	CATGATTGAAACAAAATCTC+AGG	-	chr4_4:64938047-64938066	Msa0695410:CDS	30.0%
	AAAAAATGTCCCTTGGATTT+CGG	+	chr4_4:64938282-64938301	None:intergenic	30.0%
!!	ACATTTTAGCAATGTAGCAT+TGG	+	chr4_4:64938305-64938324	None:intergenic	30.0%
	CTCAAACTATTCATATGAGG+AGG	+	chr4_4:64933732-64933751	None:intergenic	35.0%
	AAGAGAAGTTCCAAAAAAGC+TGG	-	chr4_4:64933955-64933974	Msa0695410:three_prime_UTR	35.0%
!!!	ATTTGAGCTTCCAGCTTTTT+TGG	+	chr4_4:64933968-64933987	None:intergenic	35.0%
	GCAAGCATAAATGTTGATGT+TGG	+	chr4_4:64934385-64934404	None:intergenic	35.0%
	AATAAGCAGAGGAAAAGTCT+TGG	+	chr4_4:64934549-64934568	None:intergenic	35.0%
	CTTGGAACTAAAATAAGCAG+AGG	+	chr4_4:64934560-64934579	None:intergenic	35.0%
!	AGCAAGGTACCTACTTAATT+TGG	-	chr4_4:64934738-64934757	Msa0695410:intron	35.0%
!	GCAAGGTACCTACTTAATTT+GGG	-	chr4_4:64934739-64934758	Msa0695410:intron	35.0%
!	ACCTACTTAATTTGGGTTTC+AGG	-	chr4_4:64934746-64934765	Msa0695410:intron	35.0%
	ACCTGAAACCCAAATTAAGT+AGG	+	chr4_4:64934750-64934769	None:intergenic	35.0%
!	AATTTGGGTTTCAGGTAGTT+TGG	-	chr4_4:64934754-64934773	Msa0695410:intron	35.0%
!	AGATCAAAAGCACGTAGTTA+TGG	+	chr4_4:64934834-64934853	None:intergenic	35.0%
	CAACGCATTATTATATGCAG+GGG	+	chr4_4:64934948-64934967	None:intergenic	35.0%
	GACAACGCATTATTATATGC+AGG	+	chr4_4:64934950-64934969	None:intergenic	35.0%
!!	TATGGAGTAGTTTGTTGTTG+GGG	-	chr4_4:64935012-64935031	Msa0695410:intron	35.0%
!!	TTTGTTGTTGGGGTCTAAAA+TGG	-	chr4_4:64935022-64935041	Msa0695410:intron	35.0%
	AACAACAATGAAACAGAGAG+AGG	-	chr4_4:64935256-64935275	Msa0695410:intron	35.0%
	GAAGAGAACTTCAGACATAA+AGG	+	chr4_4:64935345-64935364	None:intergenic	35.0%
	ATGTATGGATGACCCATTAA+TGG	+	chr4_4:64935459-64935478	None:intergenic	35.0%
	ACTCAATACGAGTGAATGTA+TGG	+	chr4_4:64935474-64935493	None:intergenic	35.0%
!	ATAAGGGTGCAGTATAATGT+TGG	+	chr4_4:64935664-64935683	None:intergenic	35.0%
!!	AGAGTGATTGTTATTTGAGG+TGG	-	chr4_4:64936433-64936452	Msa0695410:intron	35.0%
!!	TGATTGTTATTTGAGGTGGA+AGG	-	chr4_4:64936437-64936456	Msa0695410:intron	35.0%
!!	GATTGTTATTTGAGGTGGAA+GGG	-	chr4_4:64936438-64936457	Msa0695410:intron	35.0%
	CACATGATCCAACAAAAATG+AGG	+	chr4_4:64936888-64936907	None:intergenic	35.0%
!!	CTCATTTTTGTTGGATCATG+TGG	-	chr4_4:64936886-64936905	Msa0695410:intron	35.0%
	GAAGTTCAGACATGTACATT+GGG	-	chr4_4:64936909-64936928	Msa0695410:intron	35.0%
	AATTCCCTCATCTGATTAAG+CGG	-	chr4_4:64937186-64937205	Msa0695410:intron	35.0%
	CTCAATGTTGTGAAGCTTAT+AGG	+	chr4_4:64937324-64937343	None:intergenic	35.0%
!!	ATTTGTTGTTTGGGGAAACA+CGG	-	chr4_4:64937348-64937367	Msa0695410:intron	35.0%
	AAATCACTAAGACACATACG+AGG	-	chr4_4:64937524-64937543	Msa0695410:intron	35.0%
	AATCACTAAGACACATACGA+GGG	-	chr4_4:64937525-64937544	Msa0695410:intron	35.0%
	TCGGGATTAAATTGGATCAA+CGG	+	chr4_4:64937623-64937642	None:intergenic	35.0%
	CATCAAATTCAGATAGTCCA+TGG	+	chr4_4:64937924-64937943	None:intergenic	35.0%
	ACTCAAAAAGAAGTTGCAGA+AGG	-	chr4_4:64937944-64937963	Msa0695410:CDS	35.0%
	ATAACTTTCTCCGAAATCCA+AGG	-	chr4_4:64938269-64938288	Msa0695410:five_prime_UTR	35.0%
	TAACTTTCTCCGAAATCCAA+GGG	-	chr4_4:64938270-64938289	Msa0695410:five_prime_UTR	35.0%
	GTCAGAGAGATCTAGAAACA+AGG	+	chr4_4:64933781-64933800	None:intergenic	40.0%
!	GACCTTTTCCCTTGAAACTA+TGG	-	chr4_4:64933798-64933817	Msa0695410:three_prime_UTR	40.0%
	CTCCATAGTTTCAAGGGAAA+AGG	+	chr4_4:64933803-64933822	None:intergenic	40.0%
	TCTTGGCTCCATAGTTTCAA+GGG	+	chr4_4:64933809-64933828	None:intergenic	40.0%
	TTCTTGGCTCCATAGTTTCA+AGG	+	chr4_4:64933810-64933829	None:intergenic	40.0%
	TTGAAACTATGGAGCCAAGA+AGG	-	chr4_4:64933809-64933828	Msa0695410:three_prime_UTR	40.0%
!	ATTTTTCCCTCTGACCTTCT+TGG	+	chr4_4:64933826-64933845	None:intergenic	40.0%
	GAAGTACAAAGAGGATCATG+AGG	-	chr4_4:64933852-64933871	Msa0695410:three_prime_UTR	40.0%
!!	AGAGGATACGGATTTTGAAG+AGG	-	chr4_4:64933888-64933907	Msa0695410:three_prime_UTR	40.0%
!!	TACGGATTTTGAAGAGGAAG+AGG	-	chr4_4:64933894-64933913	Msa0695410:three_prime_UTR	40.0%
!!	GATTTTGAAGAGGAAGAGGA+TGG	-	chr4_4:64933898-64933917	Msa0695410:three_prime_UTR	40.0%
!	TATTCCACCTTGTTGTCAAG+TGG	-	chr4_4:64933987-64934006	Msa0695410:three_prime_UTR	40.0%
	CAATTCTCCACTTGACAACA+AGG	+	chr4_4:64933997-64934016	None:intergenic	40.0%
	GTGAAGCTAAGCAATATCAC+CGG	-	chr4_4:64934031-64934050	Msa0695410:CDS	40.0%
	CTGCAATCCTGTAATGTGTA+CGG	+	chr4_4:64934094-64934113	None:intergenic	40.0%
	ACATTACAGGATTGCAGCAA+AGG	-	chr4_4:64934097-64934116	Msa0695410:CDS	40.0%
	ATTATTATATGCAGGGGTCG+GGG	+	chr4_4:64934942-64934961	None:intergenic	40.0%
	CATTATTATATGCAGGGGTC+GGG	+	chr4_4:64934943-64934962	None:intergenic	40.0%
	GCATTATTATATGCAGGGGT+CGG	+	chr4_4:64934944-64934963	None:intergenic	40.0%
	GTGAGCATAACTCAGTTGAT+AGG	+	chr4_4:64934972-64934991	None:intergenic	40.0%
!	TGTCTGAAGTTCTCTTCAGA+TGG	-	chr4_4:64935348-64935367	Msa0695410:intron	40.0%
!	GTCTGAAGTTCTCTTCAGAT+GGG	-	chr4_4:64935349-64935368	Msa0695410:intron	40.0%
!	TCTGAAGTTCTCTTCAGATG+GGG	-	chr4_4:64935350-64935369	Msa0695410:intron	40.0%
	TATTGCTGTGTACGGTGTAT+TGG	-	chr4_4:64935384-64935403	Msa0695410:intron	40.0%
	ATTGCTGTGTACGGTGTATT+GGG	-	chr4_4:64935385-64935404	Msa0695410:intron	40.0%
	AAGATTTCTCAACACTACCC+TGG	-	chr4_4:64935755-64935774	Msa0695410:intron	40.0%
	GGATGAAATCAGTGACATAC+TGG	+	chr4_4:64935848-64935867	None:intergenic	40.0%
	GTTTCTACAACGGTTAAAGG+TGG	-	chr4_4:64936524-64936543	Msa0695410:intron	40.0%
!!!	GTGGTTTTAGTAGTGGTCAA+CGG	-	chr4_4:64936555-64936574	Msa0695410:intron	40.0%
!!!	TGGTTTTAGTAGTGGTCAAC+GGG	-	chr4_4:64936556-64936575	Msa0695410:intron	40.0%
	TTTATCACCTCTGATCGTTG+TGG	+	chr4_4:64936689-64936708	None:intergenic	40.0%
	AACGATCAGAGGTGATAAAG+TGG	-	chr4_4:64936690-64936709	Msa0695410:intron	40.0%
	TGGTAGTCGTAGTTGTGATT+AGG	-	chr4_4:64936742-64936761	Msa0695410:intron	40.0%
	GGAAGTTCAGACATGTACAT+TGG	-	chr4_4:64936908-64936927	Msa0695410:intron	40.0%
	GTGCTGTATAGTAAGTGTGA+GGG	+	chr4_4:64937061-64937080	None:intergenic	40.0%
	ACCACCGAGAAAAACTCATA+AGG	-	chr4_4:64937128-64937147	Msa0695410:intron	40.0%
!	ACCTTATGAGTTTTTCTCGG+TGG	+	chr4_4:64937132-64937151	None:intergenic	40.0%
	ATTCCCTCATCTGATTAAGC+GGG	-	chr4_4:64937187-64937206	Msa0695410:intron	40.0%
	TGCAATTTCCCCATCAAGTT+AGG	-	chr4_4:64937243-64937262	Msa0695410:intron	40.0%
	TGAGCATACCTAACTTGATG+GGG	+	chr4_4:64937254-64937273	None:intergenic	40.0%
	GTGAGCATACCTAACTTGAT+GGG	+	chr4_4:64937255-64937274	None:intergenic	40.0%
	TGTGAGCATACCTAACTTGA+TGG	+	chr4_4:64937256-64937275	None:intergenic	40.0%
	TCAAGTTAGGTATGCTCACA+AGG	-	chr4_4:64937256-64937275	Msa0695410:intron	40.0%
	TTAGTGGGGAATCAAACTGA+TGG	+	chr4_4:64937398-64937417	None:intergenic	40.0%
	ATCACTAAGACACATACGAG+GGG	-	chr4_4:64937526-64937545	Msa0695410:intron	40.0%
	GGGATTAAATTGGATCAACG+GGG	+	chr4_4:64937621-64937640	None:intergenic	40.0%
	CGGGATTAAATTGGATCAAC+GGG	+	chr4_4:64937622-64937641	None:intergenic	40.0%
!	TCGCAAAAGTGCAATTGACT+AGG	-	chr4_4:64937993-64938012	Msa0695410:CDS	40.0%
!	TGACAGAAGATAGAGAGCAT+TGG	+	chr4_4:64938111-64938130	None:intergenic	40.0%
	GCATTGGAAAAAATGTCCCT+TGG	+	chr4_4:64938289-64938308	None:intergenic	40.0%
	GTACAAAGAGGATCATGAGG+AGG	-	chr4_4:64933855-64933874	Msa0695410:three_prime_UTR	45.0%
	GGAAGAAGAGGAAGAGGATA+CGG	-	chr4_4:64933876-64933895	Msa0695410:three_prime_UTR	45.0%
	AAGAGGAAGAGGATGGTAGA+AGG	-	chr4_4:64933905-64933924	Msa0695410:three_prime_UTR	45.0%
	AAGAGGATGGTAGAAGGAAG+AGG	-	chr4_4:64933911-64933930	Msa0695410:three_prime_UTR	45.0%
	AGAGGATGGTAGAAGGAAGA+GGG	-	chr4_4:64933912-64933931	Msa0695410:three_prime_UTR	45.0%
	TTCTCCACTTGACAACAAGG+TGG	+	chr4_4:64933994-64934013	None:intergenic	45.0%
	AAGCTAAGCAATATCACCGG+AGG	-	chr4_4:64934034-64934053	Msa0695410:CDS	45.0%
	AATCCTGTAATGTGTACGGC+AGG	+	chr4_4:64934090-64934109	None:intergenic	45.0%
!!	GGTTTTGTCAGCAATGTAGC+AGG	-	chr4_4:64934118-64934137	Msa0695410:intron	45.0%
	AGGTAGTTTGGTCCTGATCA+CGG	-	chr4_4:64934766-64934785	Msa0695410:intron	45.0%
!!	TTTTTGGCCAGGTAGCTTAG+TGG	-	chr4_4:64934868-64934887	Msa0695410:intron	45.0%
	ATTCTAGCCACTAAGCTACC+TGG	+	chr4_4:64934878-64934897	None:intergenic	45.0%
!	ATGTGAATAAGTGGGGTGTC+CGG	-	chr4_4:64934908-64934927	Msa0695410:intron	45.0%
	TTGCTGTGTACGGTGTATTG+GGG	-	chr4_4:64935386-64935405	Msa0695410:intron	45.0%
	AGGGTGCAGTATAATGTTGG+AGG	+	chr4_4:64935661-64935680	None:intergenic	45.0%
!	TGTTATTTGAGGTGGAAGGG+TGG	-	chr4_4:64936441-64936460	Msa0695410:intron	45.0%
	TGGAGCGATGATTAGTGGAA+AGG	-	chr4_4:64936468-64936487	Msa0695410:intron	45.0%
	AGCGATGATTAGTGGAAAGG+TGG	-	chr4_4:64936471-64936490	Msa0695410:intron	45.0%
	CTACAACGGTTAAAGGTGGT+TGG	-	chr4_4:64936528-64936547	Msa0695410:intron	45.0%
!!!	TGGAGTGGTGGTTTTAGTAG+TGG	-	chr4_4:64936548-64936567	Msa0695410:intron	45.0%
!!	GGTTTTAGTAGTGGTCAACG+GGG	-	chr4_4:64936557-64936576	Msa0695410:intron	45.0%
!!	GTTTTAGTAGTGGTCAACGG+GGG	-	chr4_4:64936558-64936577	Msa0695410:intron	45.0%
	ATGTAGTCGCAACCTTAGAG+TGG	-	chr4_4:64936602-64936621	Msa0695410:intron	45.0%
	CCACTTTGATCACCACTCTA+AGG	+	chr4_4:64936617-64936636	None:intergenic	45.0%
	CCTTAGAGTGGTGATCAAAG+TGG	-	chr4_4:64936614-64936633	Msa0695410:intron	45.0%
	AGAGTGGTGATCAAAGTGGT+TGG	-	chr4_4:64936618-64936637	Msa0695410:intron	45.0%
!	TGATCAAAGTGGTTGGTGTG+AGG	-	chr4_4:64936625-64936644	Msa0695410:intron	45.0%
!	AGGTTTGATGCTGGTTGAAG+TGG	-	chr4_4:64936645-64936664	Msa0695410:intron	45.0%
	GATCAGAGGTGATAAAGTGG+TGG	-	chr4_4:64936693-64936712	Msa0695410:intron	45.0%
	ACAGTGAGTAGAGTTGTGCT+CGG	-	chr4_4:64936719-64936738	Msa0695410:intron	45.0%
	TTGTGATTAGGATCCACCAG+CGG	-	chr4_4:64936754-64936773	Msa0695410:intron	45.0%
	CTAAATTAACACATCGCCGC+TGG	+	chr4_4:64936773-64936792	None:intergenic	45.0%
	CAGCGGCGATGTGTTAATTT+AGG	-	chr4_4:64936771-64936790	Msa0695410:intron	45.0%
	CGGTGTCTAATTCGCTTGAA+CGG	+	chr4_4:64936945-64936964	None:intergenic	45.0%
	CGTGCTGTATAGTAAGTGTG+AGG	+	chr4_4:64937062-64937081	None:intergenic	45.0%
	TTCCCTCATCTGATTAAGCG+GGG	-	chr4_4:64937188-64937207	Msa0695410:intron	45.0%
	TTCCCCGCTTAATCAGATGA+GGG	+	chr4_4:64937193-64937212	None:intergenic	45.0%
	ATTCCCCGCTTAATCAGATG+AGG	+	chr4_4:64937194-64937213	None:intergenic	45.0%
!!	AAGAAGTTGCAGAAGGCGTT+TGG	-	chr4_4:64937951-64937970	Msa0695410:CDS	45.0%
	AGAGACCAGCAACATACGAA+GGG	+	chr4_4:64938079-64938098	None:intergenic	45.0%
	TAGAGACCAGCAACATACGA+AGG	+	chr4_4:64938080-64938099	None:intergenic	45.0%
!	TCGTATGTTGCTGGTCTCTA+AGG	-	chr4_4:64938080-64938099	Msa0695410:CDS	45.0%
!!!	TATATATTTTTGTTTAATTA+AGG	-	chr4_4:64934196-64934215	Msa0695410:intron	5.0%
	TATGGAGCCAAGAAGGTCAG+AGG	-	chr4_4:64933816-64933835	Msa0695410:three_prime_UTR	50.0%
	ATGGAGCCAAGAAGGTCAGA+GGG	-	chr4_4:64933817-64933836	Msa0695410:three_prime_UTR	50.0%
	GGATCATGAGGAGGAAGAAG+AGG	-	chr4_4:64933864-64933883	Msa0695410:three_prime_UTR	50.0%
	TGAGGAGGAAGAAGAGGAAG+AGG	-	chr4_4:64933870-64933889	Msa0695410:three_prime_UTR	50.0%
!	GCAATATCACCGGAGGCATA+AGG	-	chr4_4:64934041-64934060	Msa0695410:CDS	50.0%
	ACTCACAGACCTTATGCCTC+CGG	+	chr4_4:64934053-64934072	None:intergenic	50.0%
	AATGTGTACGGCAGGTGCTT+TGG	+	chr4_4:64934082-64934101	None:intergenic	50.0%
!	TGTGAATAAGTGGGGTGTCC+GGG	-	chr4_4:64934909-64934928	Msa0695410:intron	50.0%
	GCTGTTGGAGCGATGATTAG+TGG	-	chr4_4:64936463-64936482	Msa0695410:intron	50.0%
	TAGTGGAAAGGTGGCCACAA+CGG	-	chr4_4:64936480-64936499	Msa0695410:intron	50.0%
	TTGATCACTCCCAACCGTTG+TGG	+	chr4_4:64936497-64936516	None:intergenic	50.0%
	ACGGTTAAAGGTGGTTGGAG+TGG	-	chr4_4:64936533-64936552	Msa0695410:intron	50.0%
	GTTAAAGGTGGTTGGAGTGG+TGG	-	chr4_4:64936536-64936555	Msa0695410:intron	50.0%
	ACGGGGGTCATAGTAGTGTT+TGG	-	chr4_4:64936574-64936593	Msa0695410:intron	50.0%
	GGGGTCATAGTAGTGTTTGG+TGG	-	chr4_4:64936577-64936596	Msa0695410:intron	50.0%
	GTTGGTGTGAGGTTTGATGC+TGG	-	chr4_4:64936636-64936655	Msa0695410:intron	50.0%
	CATGTAGCCACAACGATCAG+AGG	-	chr4_4:64936679-64936698	Msa0695410:intron	50.0%
	AATTAACACATCGCCGCTGG+TGG	+	chr4_4:64936770-64936789	None:intergenic	50.0%
	GTTTGGCTGGGCATAATGAG+AGG	-	chr4_4:64937968-64937987	Msa0695410:CDS	50.0%
	TCAAGCCCTTCGTATGTTGC+TGG	-	chr4_4:64938071-64938090	Msa0695410:CDS	50.0%
	GCACCTGCCGTACACATTAC+AGG	-	chr4_4:64934084-64934103	Msa0695410:CDS	55.0%
	GGAGGTGGAGACATGCTTCT+TGG	-	chr4_4:64934492-64934511	Msa0695410:intron	55.0%
	TCCTGATCACGGTGCACAGA+TGG	-	chr4_4:64934777-64934796	Msa0695410:intron	55.0%
	TCCATCTGTGCACCGTGATC+AGG	+	chr4_4:64934781-64934800	None:intergenic	55.0%
!	GTGAATAAGTGGGGTGTCCG+GGG	-	chr4_4:64934910-64934929	Msa0695410:intron	55.0%
	GAAAGGTGGCCACAACGGTT+GGG	-	chr4_4:64936485-64936504	Msa0695410:intron	55.0%
	GTGAGTAGAGTTGTGCTCGG+TGG	-	chr4_4:64936722-64936741	Msa0695410:intron	55.0%
!!	AGTTGCAGAAGGCGTTTGGC+TGG	-	chr4_4:64937955-64937974	Msa0695410:CDS	55.0%
!!	GTTGCAGAAGGCGTTTGGCT+GGG	-	chr4_4:64937956-64937975	Msa0695410:CDS	55.0%
	TGAGGTGGAAGGGTGGCTGT+TGG	-	chr4_4:64936448-64936467	Msa0695410:intron	60.0%
	GGAAAGGTGGCCACAACGGT+TGG	-	chr4_4:64936484-64936503	Msa0695410:intron	60.0%
	AGGGGTCGGGGTTCGAACCC+CGG	+	chr4_4:64934930-64934949	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	64933687	64938352	64933687	ID=Msa0695410;Name=Msa0695410
chr4_4	mRNA	64933687	64938352	64933687	ID=Msa0695410-mRNA-1;Parent=Msa0695410;Name=Msa0695410-mRNA-1;_AED=0.07;_eAED=0.07;_QI=130\|1\|1\|1\|1\|1\|2\|338\|139
chr4_4	exon	64933687	64934121	64933687	ID=Msa0695410-mRNA-1:exon:18667;Parent=Msa0695410-mRNA-1
chr4_4	exon	64937900	64938352	64937900	ID=Msa0695410-mRNA-1:exon:18666;Parent=Msa0695410-mRNA-1
chr4_4	five_prime_UTR	64938223	64938352	64938223	ID=Msa0695410-mRNA-1:five_prime_utr;Parent=Msa0695410-mRNA-1
chr4_4	CDS	64937900	64938222	64937900	ID=Msa0695410-mRNA-1:cds;Parent=Msa0695410-mRNA-1
chr4_4	CDS	64934025	64934121	64934025	ID=Msa0695410-mRNA-1:cds;Parent=Msa0695410-mRNA-1
chr4_4	three_prime_UTR	64933687	64934024	64933687	ID=Msa0695410-mRNA-1:three_prime_utr;Parent=Msa0695410-mRNA-1

Gene Sequence

>Msa0695410

ATGGAGCCAAGAAGGTCAGAGGGAAAAATAAGTTTGAAGTACAAAGAGGATCATGAGGAGGAAGAAGAGGAAGAGGATACGGATTTTGAAGAGGAAGAGGATGGTAGAAGGAAGAGGGTAGTGACAGATCTCTATAGCAAGAGAAGTTCCAAAAAAGCTGGAAGCTCAAATATTCCACCTTGTTGTCAAGTGGAGAATTGTGATGCTGATCTTAGTGAAGCTAAGCAATATCACCGGAGGCATAAGGTCTGTGAGTATCATGCCAAAGCACCTGCCGTACACATTACAGGATTGCAGCAAAGGTTTTGTCAGCAATGTAGCAGATTCCATGGACTATCTGAATTTGATGACTCAAAAAGAAGTTGCAGAAGGCGTTTGGCTGGGCATAATGAGAGGCGTCGCAAAAGTGCAATTGACTAG

Protein sequence

>Msa0695410

MEPRRSEGKISLKYKEDHEEEEEEEDTDFEEEEDGRRKRVVTDLYSKRSSKKAGSSNIPPCCQVENCDADLSEAKQYHRRHKVCEYHAKAPAVHITGLQQRFCQQCSRFHGLSEFDDSKRSCRRRLAGHNERRRKSAID*