AlfalfaGEDB | Msa0653020

M. sativa cultivar zhongmu-4 / Msa0653020

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
PFAM: PF03110.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0653020	RHN62398.1	97.222	144	3	1	1	143	11	154	9.95e-96	283

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0653020	sp\|Q38741\|SBP1_ANTMA	57.554	139	49	2	1	139	1	129	5.53e-47	151

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0653020	A0A396IC84	97.222	144	3	1	1	143	11	154	4.75e-96	283

TFs/TRs:

Gene ID	Type	Classification
Msa0653020	TF	SBP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0017510	Msa0653020	0.804542	2.054904e-49	-8.615850e-47
Msa0022640	Msa0653020	0.814381	1.585622e-51	-8.615850e-47
Msa0044100	Msa0653020	0.821343	4.247512e-53	-8.615850e-47
Msa0621590	Msa0653020	0.811539	6.655894e-51	-8.615850e-47
Msa0629370	Msa0653020	0.807005	6.244186e-50	-8.615850e-47
Msa0631120	Msa0653020	0.801274	9.725590e-49	-8.615850e-47
Msa0653020	Msa0657970	0.803668	3.123548e-49	-8.615850e-47
Msa0653020	Msa0695410	0.839080	1.962277e-57	-8.615850e-47
Msa0653020	Msa0715310	0.805215	1.486753e-49	-8.615850e-47
Msa0653020	Msa0716450	0.802641	5.095009e-49	-8.615850e-47
Msa0653020	Msa0722930	0.801575	8.441175e-49	-8.615850e-47
Msa0653020	Msa0723140	0.803872	2.833637e-49	-8.615850e-47
Msa0653020	Msa0736060	0.816840	4.494589e-52	-8.615850e-47
Msa0653020	Msa0773610	0.837248	5.812521e-57	-8.615850e-47
Msa0653020	Msa0777930	0.802913	4.476735e-49	-8.615850e-47
Msa0653020	Msa0801760	0.826332	2.874775e-54	-8.615850e-47
Msa0653020	Msa0837980	0.807896	4.040781e-50	-8.615850e-47
Msa0653020	Msa0845590	-0.813245	2.822019e-51	-8.615850e-47
Msa0653020	Msa0880140	0.803602	3.224151e-49	-8.615850e-47
Msa0653020	Msa0885280	0.802459	5.553786e-49	-8.615850e-47
Msa0653020	Msa0951720	0.800106	1.683679e-48	-8.615850e-47
Msa0653020	Msa0961420	-0.816684	4.871143e-52	-8.615850e-47
Msa0653020	Msa0981010	0.808745	2.663005e-50	-8.615850e-47
Msa0653020	Msa1000020	0.820282	7.448760e-53	-8.615850e-47
Msa0653020	Msa1002620	0.806104	9.673194e-50	-8.615850e-47
Msa0653020	Msa1008490	0.807139	5.849170e-50	-8.615850e-47
Msa0653020	Msa1023400	0.811885	5.597642e-51	-8.615850e-47
Msa0653020	Msa1026500	0.812384	4.357180e-51	-8.615850e-47
Msa0653020	Msa1042710	0.823581	1.282698e-53	-8.615850e-47
Msa0653020	Msa1044090	0.809530	1.808275e-50	-8.615850e-47
Msa0653020	Msa1083410	0.807795	4.244939e-50	-8.615850e-47
Msa0653020	Msa1098560	0.800104	1.685428e-48	-8.615850e-47
Msa0653020	Msa1111760	0.803935	2.748763e-49	-8.615850e-47
Msa0653020	Msa1154070	0.812276	4.599558e-51	-8.615850e-47
Msa0653020	Msa1204980	-0.822024	2.955675e-53	-8.615850e-47
Msa0653020	Msa1205010	-0.824454	8.002471e-54	-8.615850e-47
Msa0653020	Msa1222970	0.815659	8.255839e-52	-8.615850e-47
Msa0653020	Msa1228210	0.826903	2.100522e-54	-8.615850e-47
Msa0653020	Msa1252390	0.824563	7.543636e-54	-8.615850e-47
Msa0653020	Msa1256540	-0.827433	1.569089e-54	-8.615850e-47
Msa0653020	Msa1271280	0.835732	1.413792e-56	-8.615850e-47
Msa0653020	Msa1271300	0.809304	2.021934e-50	-8.615850e-47
Msa0653020	Msa1289280	0.806508	7.951243e-50	-8.615850e-47
Msa0653020	Msa1296960	-0.828258	9.934981e-55	-8.615850e-47
Msa0653020	Msa1324780	0.821171	4.651488e-53	-8.615850e-47
Msa0653020	Msa1335770	0.802136	6.474454e-49	-8.615850e-47
Msa0653020	Msa1367080	0.807881	4.069396e-50	-8.615850e-47
Msa0653020	Msa1369700	0.824570	7.512584e-54	-8.615850e-47
Msa0653020	Msa1378760	0.803840	2.877000e-49	-8.615850e-47
Msa0653020	Msa1411070	0.806513	7.931951e-50	-8.615850e-47
Msa0653020	Msa1414740	0.810701	1.011035e-50	-8.615850e-47
Msa0653020	Msa1437190	0.834512	2.872208e-56	-8.615850e-47
Msa0653020	Msa1460380	0.838921	2.157845e-57	-8.615850e-47
Msa0653020	Msa1460890	0.815151	1.070749e-51	-8.615850e-47
Msa0124110	Msa0653020	0.812122	4.969383e-51	-8.615850e-47
Msa0157290	Msa0653020	0.803879	2.824221e-49	-8.615850e-47
Msa0161680	Msa0653020	0.813281	2.771666e-51	-8.615850e-47
Msa0165430	Msa0653020	0.808046	3.753198e-50	-8.615850e-47
Msa0173990	Msa0653020	0.811419	7.069024e-51	-8.615850e-47
Msa0183750	Msa0653020	0.820992	5.115252e-53	-8.615850e-47
Msa0185640	Msa0653020	-0.824360	8.418469e-54	-8.615850e-47
Msa0195770	Msa0653020	0.827965	1.169138e-54	-8.615850e-47
Msa0200260	Msa0653020	0.803143	4.013191e-49	-8.615850e-47
Msa0201330	Msa0653020	0.821182	4.625760e-53	-8.615850e-47
Msa0371570	Msa0653020	0.827237	1.748117e-54	-8.615850e-47
Msa0373930	Msa0653020	0.803196	3.912080e-49	-8.615850e-47
Msa0419990	Msa0653020	0.812858	3.430756e-51	-8.615850e-47
Msa0463460	Msa0653020	0.804055	2.595639e-49	-8.615850e-47
Msa0465930	Msa0653020	0.800624	1.320769e-48	-8.615850e-47
Msa0466390	Msa0653020	0.804528	2.068920e-49	-8.615850e-47
Msa0470860	Msa0653020	0.808969	2.384582e-50	-8.615850e-47
Msa0243910	Msa0653020	0.834300	3.246224e-56	-8.615850e-47
Msa0243930	Msa0653020	0.830204	3.349924e-55	-8.615850e-47
Msa0257250	Msa0653020	0.804817	1.800471e-49	-8.615850e-47
Msa0262520	Msa0653020	0.801173	1.020222e-48	-8.615850e-47
Msa0269360	Msa0653020	0.805074	1.590884e-49	-8.615850e-47
Msa0270270	Msa0653020	0.801890	7.272687e-49	-8.615850e-47
Msa0275670	Msa0653020	0.802944	4.411901e-49	-8.615850e-47
Msa0282590	Msa0653020	0.817105	3.917546e-52	-8.615850e-47
Msa0338110	Msa0653020	0.801902	7.230954e-49	-8.615850e-47
Msa0342340	Msa0653020	-0.824872	6.379367e-54	-8.615850e-47
Msa0517330	Msa0653020	0.803887	2.812304e-49	-8.615850e-47
Msa0524890	Msa0653020	-0.803415	3.523870e-49	-8.615850e-47
Msa0531430	Msa0653020	0.808639	2.805658e-50	-8.615850e-47
Msa0533070	Msa0653020	0.804169	2.457989e-49	-8.615850e-47
Msa0534590	Msa0653020	0.811055	8.476732e-51	-8.615850e-47
Msa0557680	Msa0653020	0.833890	4.111577e-56	-8.615850e-47
Msa0577620	Msa0653020	0.803997	2.668926e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0653020	MtrunA17_Chr4g0046991	97.222	144	3	1	1	143	11	154	9.15e-100	283
Msa0653020	MtrunA17_Chr2g0282521	72.477	109	27	2	33	140	36	142	1.26e-49	155
Msa0653020	MtrunA17_Chr8g0360361	72.941	85	23	0	59	143	62	146	5.80e-43	140
Msa0653020	MtrunA17_Chr8g0334671	61.607	112	36	2	27	136	155	261	5.00e-38	131
Msa0653020	MtrunA17_Chr7g0231911	74.074	81	21	0	62	142	149	229	9.22e-38	130
Msa0653020	MtrunA17_Chr7g0258471	74.026	77	20	0	59	135	139	215	1.01e-36	129
Msa0653020	MtrunA17_Chr5g0420051	60.000	95	35	1	50	141	166	260	1.27e-35	127
Msa0653020	MtrunA17_Chr3g0122411	69.737	76	23	0	60	135	163	238	3.76e-34	123
Msa0653020	MtrunA17_Chr2g0302791	59.794	97	35	1	47	139	120	216	4.80e-34	125
Msa0653020	MtrunA17_Chr4g0061651	72.973	74	20	0	62	135	123	196	1.27e-33	122
Msa0653020	MtrunA17_Chr7g0224821	60.674	89	33	1	47	135	64	150	6.95e-33	119
Msa0653020	MtrunA17_Chr3g0132091	56.436	101	40	1	39	135	46	146	2.81e-32	117
Msa0653020	MtrunA17_Chr1g0194121	62.921	89	33	0	48	136	133	221	3.86e-32	119
Msa0653020	MtrunA17_Chr1g0162871	68.750	80	25	0	60	139	102	181	4.47e-32	119
Msa0653020	MtrunA17_Chr7g0270541	63.333	90	33	0	47	136	130	219	6.64e-32	119
Msa0653020	MtrunA17_Chr2g0308321	67.532	77	25	0	62	138	171	247	7.84e-32	118
Msa0653020	MtrunA17_Chr8g0377421	53.043	115	46	2	29	135	91	205	4.98e-30	110
Msa0653020	MtrunA17_Chr8g0386271	67.568	74	24	0	62	135	99	172	1.72e-29	110
Msa0653020	MtrunA17_Chr8g0377401	64.474	76	27	0	59	134	159	234	2.32e-29	107
Msa0653020	MtrunA17_Chr2g0286661	57.692	78	33	0	62	139	103	180	1.45e-24	98.2
Msa0653020	MtrunA17_Chr2g0317041	69.388	49	15	0	60	108	97	145	3.13e-20	81.3
Msa0653020	MtrunA17_Chr1g0175031	64.151	53	19	0	56	108	68	120	1.24e-18	76.6
Msa0653020	MtrunA17_Chr8g0377431	55.357	56	25	0	60	115	149	204	3.60e-15	69.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0653020	AT2G33810.1	60.284	141	44	3	1	139	1	131	2.31e-44	142
Msa0653020	AT1G53160.3	67.391	92	27	1	46	137	41	129	4.23e-38	127
Msa0653020	AT1G53160.2	67.391	92	27	1	46	137	41	129	4.27e-38	127
Msa0653020	AT1G53160.1	67.391	92	27	1	46	137	41	129	4.27e-38	127
Msa0653020	AT3G15270.1	69.512	82	25	0	62	143	63	144	9.08e-37	124
Msa0653020	AT1G69170.1	64.894	94	30	1	50	140	109	202	4.23e-36	128
Msa0653020	AT3G60030.1	62.500	96	36	0	47	142	112	207	4.43e-36	131
Msa0653020	AT1G02065.1	64.286	98	33	1	40	135	164	261	8.34e-36	126
Msa0653020	AT2G47070.1	72.368	76	21	0	61	136	105	180	2.53e-34	126
Msa0653020	AT1G27360.2	56.701	97	42	0	39	135	152	248	9.19e-33	119
Msa0653020	AT1G27360.1	56.701	97	42	0	39	135	152	248	9.19e-33	119
Msa0653020	AT1G27360.3	56.701	97	42	0	39	135	152	248	9.19e-33	119
Msa0653020	AT1G27360.4	56.701	97	42	0	39	135	152	248	9.19e-33	119
Msa0653020	AT5G43270.3	53.982	113	47	1	28	135	130	242	9.21e-33	119
Msa0653020	AT5G43270.1	53.982	113	47	1	28	135	130	242	9.21e-33	119
Msa0653020	AT5G43270.2	53.982	113	47	1	28	135	130	242	9.21e-33	119
Msa0653020	AT2G42200.1	69.737	76	23	0	60	135	72	147	1.09e-32	119
Msa0653020	AT1G20980.1	70.513	78	23	0	60	137	118	195	1.45e-32	121
Msa0653020	AT1G27370.6	53.125	96	45	0	40	135	154	249	1.76e-32	117
Msa0653020	AT1G27370.1	53.125	96	45	0	40	135	154	249	6.32e-32	117
Msa0653020	AT1G27370.5	53.125	96	45	0	40	135	154	249	6.32e-32	117
Msa0653020	AT1G27370.3	53.125	96	45	0	40	135	154	249	6.32e-32	117
Msa0653020	AT1G27370.2	53.125	96	45	0	40	135	154	249	6.32e-32	117
Msa0653020	AT1G27370.4	53.125	96	45	0	40	135	154	249	6.32e-32	117
Msa0653020	AT1G27370.7	53.125	96	45	0	40	135	154	249	6.32e-32	117
Msa0653020	AT5G50570.1	58.621	87	36	0	56	142	95	181	2.23e-31	115
Msa0653020	AT5G50570.2	58.621	87	36	0	56	142	95	181	2.23e-31	115
Msa0653020	AT5G50670.1	58.621	87	36	0	56	142	95	181	2.23e-31	115
Msa0653020	AT5G50670.2	58.621	87	36	0	56	142	95	181	2.23e-31	115
Msa0653020	AT1G76580.2	68.750	80	25	0	60	139	112	191	3.09e-31	117
Msa0653020	AT1G76580.3	68.750	80	25	0	60	139	112	191	3.35e-31	117
Msa0653020	AT1G76580.1	68.750	80	25	0	60	139	112	191	4.45e-31	117
Msa0653020	AT3G57920.1	70.270	74	22	0	62	135	59	132	2.00e-29	109
Msa0653020	AT5G18830.2	51.852	81	39	0	62	142	138	218	1.20e-22	93.2
Msa0653020	AT5G18830.3	51.852	81	39	0	62	142	138	218	1.20e-22	93.2
Msa0653020	AT5G18830.1	51.852	81	39	0	62	142	138	218	1.25e-22	93.2
Msa0653020	AT1G02065.2	59.722	72	27	1	40	109	164	235	2.03e-21	86.7
Msa0653020	AT2G47070.2	70.000	50	15	0	87	136	2	51	1.21e-18	81.6

Find 51 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCCATAATTTCAAGGAAAA+AGG	0.203809	4_3:+60828286	None:intergenic
ATTTCAGACATTAATTAATA+AGG	0.262444	4_3:-60824094	Msa0653020:three_prime_UTR
AAGAGGAAGAGGATGGTAGA+AGG	0.346008	4_3:-60828181	Msa0653020:CDS
TCGTATGTTGCTGGTCTCTA+AGG	0.358783	4_3:-60824036	Msa0653020:three_prime_UTR
TTCTTGTCTCCATAATTTCA+AGG	0.381650	4_3:+60828279	None:intergenic
TGAGGAGGAAGAAGAGGAAG+AGG	0.391649	4_3:-60828216	Msa0653020:CDS
TCAAGCCCTTCGTATGTTGC+TGG	0.396432	4_3:-60824045	Msa0653020:three_prime_UTR
AAGAAGTTGCAGAAGGCGTT+TGG	0.399194	4_3:-60824169	Msa0653020:CDS
GGAAGAAGAGGAAGAGGATA+CGG	0.438830	4_3:-60828210	Msa0653020:CDS
AGTTGCAGAAGGCGTTTGGC+TGG	0.439917	4_3:-60824165	Msa0653020:CDS
ATAGTGTGAGAGAATGTATT+AGG	0.447100	4_3:+60828444	None:intergenic
GCACCTACCGTACACATTGC+AGG	0.447145	4_3:-60828002	Msa0653020:CDS
AAGAGGATGGTAGAAGGAAG+AGG	0.452598	4_3:-60828175	Msa0653020:CDS
GCTAGTTCACGACAAAGAAA+TGG	0.472436	4_3:-60828488	Msa0653020:five_prime_UTR
GCAATATCACCGGAGACATA+AGG	0.487344	4_3:-60828045	Msa0653020:CDS
CATGATTGAAACAAAATCTC+AGG	0.492267	4_3:-60824069	Msa0653020:three_prime_UTR
GGATCATGAGGAGGAAGAAG+AGG	0.499097	4_3:-60828222	Msa0653020:CDS
AGAGGATGGTAGAAGGAAGA+GGG	0.504666	4_3:-60828174	Msa0653020:CDS
AAACTCAAACTATTCATATG+AGG	0.504948	4_3:+60828354	None:intergenic
ACCTTGTTTCTAGATCTCTC+TGG	0.509860	4_3:-60828309	Msa0653020:five_prime_UTR
AAAAGTGCAATTGACTATCA+AGG	0.509871	4_3:-60824123	Msa0653020:CDS
ACATTGCAGGATTGCAGCAA+AGG	0.514685	4_3:-60827989	Msa0653020:CDS
TTGAAATTATGGAGACAAGA+AGG	0.521042	4_3:-60828277	Msa0653020:exon
TATTCCACCTTGTTGTCAAG+TGG	0.526109	4_3:-60828099	Msa0653020:CDS
AATGTGTACGGTAGGTGCTT+TGG	0.528660	4_3:+60828007	None:intergenic
CATCAAATTCAGATAGTCCA+TGG	0.531989	4_3:+60824199	None:intergenic
GTTGCAGAAGGCGTTTGGCT+GGG	0.534230	4_3:-60824164	Msa0653020:CDS
TATTAGGACCACAAGTGGTA+TGG	0.547240	4_3:+60828460	None:intergenic
ACTCACAGACCTTATGTCTC+CGG	0.562455	4_3:+60828036	None:intergenic
CAATTCTCCACTTGACAACA+AGG	0.571704	4_3:+60828092	None:intergenic
TGACAGAAGATAGAGAGCAT+TGG	0.573723	4_3:+60824008	None:intergenic
CTTTGTCGTGAACTAGCTAG+AGG	0.574215	4_3:+60828494	None:intergenic
GTTTGGCTGGGCATAATGAG+AGG	0.579938	4_3:-60824152	Msa0653020:CDS
CTGCAATCCTGCAATGTGTA+CGG	0.596450	4_3:+60827995	None:intergenic
ATGGAGACAAGAAGGTCAGA+GGG	0.599169	4_3:-60828269	Msa0653020:CDS
CTCAAACTATTCATATGAGG+AGG	0.599476	4_3:+60828357	None:intergenic
TATGGAGACAAGAAGGTCAG+AGG	0.605266	4_3:-60828270	Msa0653020:CDS
GAGGTACAAAGAGGATCATG+AGG	0.608974	4_3:-60828234	Msa0653020:CDS
ATTACTTTCTCCGAAATCCG+AGG	0.610386	4_3:-60823821	Msa0653020:three_prime_UTR
TGGTAAGACCATACCACTTG+TGG	0.611800	4_3:-60828468	Msa0653020:five_prime_UTR
TTACTTTCTCCGAAATCCGA+GGG	0.623617	4_3:-60823820	Msa0653020:three_prime_UTR
TTTGTCGTGAACTAGCTAGA+GGG	0.626926	4_3:+60828495	None:intergenic
GTGAAGCTAAGCAATATCAC+CGG	0.630226	4_3:-60828055	Msa0653020:CDS
GCCAGAGAGATCTAGAAACA+AGG	0.633465	4_3:+60828308	None:intergenic
AAGAAGTTTGAGGTACAAAG+AGG	0.636165	4_3:-60828243	Msa0653020:CDS
GAATGTATTAGGACCACAAG+TGG	0.642461	4_3:+60828455	None:intergenic
GTACAAAGAGGATCATGAGG+AGG	0.660065	4_3:-60828231	Msa0653020:CDS
TAGAGACCAGCAACATACGA+AGG	0.660132	4_3:+60824039	None:intergenic
AGAGACCAGCAACATACGAA+GGG	0.664972	4_3:+60824040	None:intergenic
AATCCTGCAATGTGTACGGT+AGG	0.674434	4_3:+60827999	None:intergenic
TTCTCCACTTGACAACAAGG+TGG	0.724295	4_3:+60828095	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTTTAATATTAAAAAA+AGG	-	chr4_3:60825901-60825920	Msa0653020:intron	0.0%
!!!	TATATATAAGAATAGTTTTA+TGG	-	chr4_3:60823897-60823916	Msa0653020:three_prime_UTR	10.0%
!!!	TTTTTTTCCTTTTTTTTTTT+AGG	-	chr4_3:60824566-60824585	Msa0653020:intron	10.0%
!!!	AAATATTTAATTAGTTGATA+TGG	+	chr4_3:60825732-60825751	None:intergenic	10.0%
!!	AATGATCAAATTAAATAAAA+AGG	+	chr4_3:60825784-60825803	None:intergenic	10.0%
!!	ATTAAAAAAATTGTGTATAA+GGG	+	chr4_3:60825892-60825911	None:intergenic	10.0%
!!	TATTAAAAAAATTGTGTATA+AGG	+	chr4_3:60825893-60825912	None:intergenic	10.0%
!!!	AAAAATAGTAACTTTTATAT+TGG	-	chr4_3:60826179-60826198	Msa0653020:intron	10.0%
!!	ATTTACACTAAAAATATAAT+GGG	+	chr4_3:60826325-60826344	None:intergenic	10.0%
!!	AATTTACACTAAAAATATAA+TGG	+	chr4_3:60826326-60826345	None:intergenic	10.0%
!!!	AATTATAAATTTTTTGCATT+AGG	+	chr4_3:60826565-60826584	None:intergenic	10.0%
!!!	AATTATAGTTTTAATAATAG+TGG	-	chr4_3:60826594-60826613	Msa0653020:intron	10.0%
!!!	TAAAATTTTAGATAAAAATG+TGG	+	chr4_3:60827142-60827161	None:intergenic	10.0%
!!!	GACAAATTTTTTTTTTTTTT+TGG	+	chr4_3:60827441-60827460	None:intergenic	10.0%
!!!	ATATGTATTATTTTTTTGTT+GGG	+	chr4_3:60827589-60827608	None:intergenic	10.0%
!!!	TATATGTATTATTTTTTTGT+TGG	+	chr4_3:60827590-60827609	None:intergenic	10.0%
!!	AATTTACTTAAAAGAGATTA+GGG	+	chr4_3:60824357-60824376	None:intergenic	15.0%
!!	AAATTTACTTAAAAGAGATT+AGG	+	chr4_3:60824358-60824377	None:intergenic	15.0%
!!	TAACAAAATATATATGTACT+TGG	+	chr4_3:60824889-60824908	None:intergenic	15.0%
!!!	TATTTCCATAATTTTTCTTT+TGG	-	chr4_3:60824910-60824929	Msa0653020:intron	15.0%
!!	AAAATCCAAAAGAAAAATTA+TGG	+	chr4_3:60824918-60824937	None:intergenic	15.0%
!!	ACTTTATAATATGAATAAGT+GGG	-	chr4_3:60825174-60825193	Msa0653020:intron	15.0%
!!	ATTTGATCATTAATCAATTA+AGG	-	chr4_3:60825793-60825812	Msa0653020:intron	15.0%
!!	TAATGAGTATTAGAAAAAAA+AGG	-	chr4_3:60826004-60826023	Msa0653020:intron	15.0%
!!	AATGAGTATTAGAAAAAAAA+GGG	-	chr4_3:60826005-60826024	Msa0653020:intron	15.0%
!!!	TTTTAGTCACTAATTATATT+TGG	-	chr4_3:60826115-60826134	Msa0653020:intron	15.0%
!!	TATCATAAGGATATTATTTA+AGG	+	chr4_3:60826289-60826308	None:intergenic	15.0%
!!	AAATAAAAAATCAGCAAAAA+TGG	+	chr4_3:60826428-60826447	None:intergenic	15.0%
!!!	AATTATAAACACTATTTTTG+TGG	-	chr4_3:60826994-60827013	Msa0653020:intron	15.0%
!!!	ATTTGATATATTTTGTTAGT+GGG	+	chr4_3:60827364-60827383	None:intergenic	15.0%
!!!	TATTTGATATATTTTGTTAG+TGG	+	chr4_3:60827365-60827384	None:intergenic	15.0%
!!	TTGTAAAAATAAAAATATCC+TGG	-	chr4_3:60827669-60827688	Msa0653020:intron	15.0%
!!!	ATTTGTTATTCAAAAAAAGA+CGG	+	chr4_3:60827772-60827791	None:intergenic	15.0%
!!!	AGATTAGTTTTTTTCAATAT+AGG	-	chr4_3:60827844-60827863	Msa0653020:intron	15.0%
!!!	GATTAGTTTTTTTCAATATA+GGG	-	chr4_3:60827845-60827864	Msa0653020:intron	15.0%
!!	ATTTCAGACATTAATTAATA+AGG	-	chr4_3:60828192-60828211	Msa0653020:CDS	15.0%
!!!	ACTTTTGTCTAAAAAAATCA+GGG	-	chr4_3:60824477-60824496	Msa0653020:intron	20.0%
!!	ATGAAAATTGTATCACTATT+TGG	+	chr4_3:60824537-60824556	None:intergenic	20.0%
!!!	TTTTCCTTTTTTTTTTTAGG+TGG	-	chr4_3:60824569-60824588	Msa0653020:intron	20.0%
!!!	TAGCTAGTTTTTTTTATGAT+TGG	-	chr4_3:60824782-60824801	Msa0653020:intron	20.0%
!!!	ACATCAAAATTTTTTTTGTC+AGG	-	chr4_3:60825131-60825150	Msa0653020:intron	20.0%
!!	CACTTTATAATATGAATAAG+TGG	-	chr4_3:60825173-60825192	Msa0653020:intron	20.0%
!!	CTTTATAATATGAATAAGTG+GGG	-	chr4_3:60825175-60825194	Msa0653020:intron	20.0%
!!	AACAATGCATTATTATATGT+CGG	+	chr4_3:60825218-60825237	None:intergenic	20.0%
!!	TTAGTGACTAAAATTAGAAA+TGG	+	chr4_3:60826108-60826127	None:intergenic	20.0%
!!!	AAGACAAAATTTCTTTTTGT+AGG	-	chr4_3:60826247-60826266	Msa0653020:intron	20.0%
!!!	TTTGATATATTTTGTTAGTG+GGG	+	chr4_3:60827363-60827382	None:intergenic	20.0%
!!	GGATAGTAACAAAAAAAAAA+GGG	-	chr4_3:60827497-60827516	Msa0653020:intron	20.0%
!!	GATAGTAACAAAAAAAAAAG+GGG	-	chr4_3:60827498-60827517	Msa0653020:intron	20.0%
!!!	TTTTTTTGTTGGGATTAAAT+TGG	+	chr4_3:60827579-60827598	None:intergenic	20.0%
!!!	AGAAAGATTAATTTTTTGTC+AGG	+	chr4_3:60827620-60827639	None:intergenic	20.0%
!!!	AATTTTTTCATGACCTAATT+TGG	+	chr4_3:60827727-60827746	None:intergenic	20.0%
!!!	TTTGTTATTCAAAAAAAGAC+GGG	+	chr4_3:60827771-60827790	None:intergenic	20.0%
!!	ATCATTCGATATTAATTAGA+CGG	+	chr4_3:60827871-60827890	None:intergenic	20.0%
!!!	TTAACTTTTTCCACTAATAT+GGG	+	chr4_3:60828004-60828023	None:intergenic	20.0%
!	AAACTCAAACTATTCATATG+AGG	+	chr4_3:60823935-60823954	None:intergenic	25.0%
!	ATGTGAAATATTCTTGTTGA+GGG	-	chr4_3:60824437-60824456	Msa0653020:intron	25.0%
!!	CACTTTTGTCTAAAAAAATC+AGG	-	chr4_3:60824476-60824495	Msa0653020:intron	25.0%
!!	CTGTTGTTTAAACACAAAAA+CGG	+	chr4_3:60824738-60824757	None:intergenic	25.0%
!!!	CTAGTTTTTTTTATGATTGG+AGG	-	chr4_3:60824785-60824804	Msa0653020:intron	25.0%
!!	TTATTACTGTTCAAAGTGTT+TGG	+	chr4_3:60824949-60824968	None:intergenic	25.0%
!	ACAATGCATTATTATATGTC+GGG	+	chr4_3:60825217-60825236	None:intergenic	25.0%
!	TTTATTACTGAGCTATGTAA+CGG	-	chr4_3:60825275-60825294	Msa0653020:intron	25.0%
!	GGTTTATATGTTACATGTTT+AGG	-	chr4_3:60825296-60825315	Msa0653020:intron	25.0%
!	ACATTGAACATGATTATGAT+CGG	-	chr4_3:60825420-60825439	Msa0653020:intron	25.0%
!!	AACTTCAGACATAAAAGTAT+CGG	+	chr4_3:60825573-60825592	None:intergenic	25.0%
!!	GACTATAGCTTCTTTTATAT+TGG	-	chr4_3:60825643-60825662	Msa0653020:intron	25.0%
!	GGAATAATGAGAAATCATAA+TGG	+	chr4_3:60825673-60825692	None:intergenic	25.0%
!	ATTTCTCATTATTCCATGAA+TGG	-	chr4_3:60825678-60825697	Msa0653020:intron	25.0%
!	TTTCTCATTATTCCATGAAT+GGG	-	chr4_3:60825679-60825698	Msa0653020:intron	25.0%
!	TATAATGTTGGAGGATTATT+GGG	+	chr4_3:60825864-60825883	None:intergenic	25.0%
!	ATATAATGTTGGAGGATTAT+TGG	+	chr4_3:60825865-60825884	None:intergenic	25.0%
!	ATAAGGGTTCAATATAATGT+TGG	+	chr4_3:60825876-60825895	None:intergenic	25.0%
!!	ATACCCAAGATTTTCAATTT+GGG	+	chr4_3:60825945-60825964	None:intergenic	25.0%
!!	TATACCCAAGATTTTCAATT+TGG	+	chr4_3:60825946-60825965	None:intergenic	25.0%
!!!	TTAGTTTTGAGAATTTACCA+GGG	+	chr4_3:60825987-60826006	None:intergenic	25.0%
!!!	ATTAGTTTTGAGAATTTACC+AGG	+	chr4_3:60825988-60826007	None:intergenic	25.0%
!!	TTTTGTAGGTTTCTTTTTGT+AGG	-	chr4_3:60826261-60826280	Msa0653020:intron	25.0%
!!	TTTTGCTAACAAGTATCATA+AGG	+	chr4_3:60826302-60826321	None:intergenic	25.0%
!	TAGTCAAGAATGTTATAGTA+TGG	+	chr4_3:60826400-60826419	None:intergenic	25.0%
!	TACTATAACATTCTTGACTA+AGG	-	chr4_3:60826400-60826419	Msa0653020:intron	25.0%
!	CAATGAAAAAGTTTCTACAA+CGG	-	chr4_3:60826701-60826720	Msa0653020:intron	25.0%
!!!	AAATTCAACCCCATTTTTAT+TGG	-	chr4_3:60827063-60827082	Msa0653020:intron	25.0%
!!!	ATTGAGTTGAATTTGTTGTT+TGG	-	chr4_3:60827286-60827305	Msa0653020:intron	25.0%
!!!	TTGAGTTGAATTTGTTGTTT+GGG	-	chr4_3:60827287-60827306	Msa0653020:intron	25.0%
!	GGGATAGTAACAAAAAAAAA+AGG	-	chr4_3:60827496-60827515	Msa0653020:intron	25.0%
!	TTCTTGATCATGTACATATT+TGG	-	chr4_3:60827540-60827559	Msa0653020:intron	25.0%
!!!	TTGAGTTTTTCTTTTTCAGT+TGG	-	chr4_3:60827698-60827717	Msa0653020:intron	25.0%
!!!	TAACTTTTTCCACTAATATG+GGG	+	chr4_3:60828003-60828022	None:intergenic	25.0%
!!!	GTTAACTTTTTCCACTAATA+TGG	+	chr4_3:60828005-60828024	None:intergenic	25.0%
!!!	ATATTTTGTTTCAGATTCCA+TGG	-	chr4_3:60828070-60828089	Msa0653020:CDS	25.0%
!!!	GAACATTTTAGCAATAGTAT+TGG	+	chr4_3:60828501-60828520	None:intergenic	25.0%
	ATAGTGTGAGAGAATGTATT+AGG	+	chr4_3:60823845-60823864	None:intergenic	30.0%
	AGGTTCTCTCAAAAAAAAAG+TGG	+	chr4_3:60823961-60823980	None:intergenic	30.0%
	CTCCATAATTTCAAGGAAAA+AGG	+	chr4_3:60824003-60824022	None:intergenic	30.0%
	TTCTTGTCTCCATAATTTCA+AGG	+	chr4_3:60824010-60824029	None:intergenic	30.0%
	TTGAAATTATGGAGACAAGA+AGG	-	chr4_3:60824009-60824028	Msa0653020:three_prime_UTR	30.0%
	GATGTGAAATATTCTTGTTG+AGG	-	chr4_3:60824436-60824455	Msa0653020:intron	30.0%
!!!	TCCTTTTTTTTTTTAGGTGG+TGG	-	chr4_3:60824572-60824591	Msa0653020:intron	30.0%
	GACAATGCATAAAATATGCA+AGG	+	chr4_3:60824617-60824636	None:intergenic	30.0%
	GTTGATGTTGGCATAATAAA+AGG	+	chr4_3:60824679-60824698	None:intergenic	30.0%
!!!	GTTTTTTTTATGATTGGAGG+TGG	-	chr4_3:60824788-60824807	Msa0653020:intron	30.0%
	AATAAGCAGAGGAAAAATCT+TGG	+	chr4_3:60824860-60824879	None:intergenic	30.0%
!!	TTTCGTTTTTAGAAAGAGCA+AGG	-	chr4_3:60824999-60825018	Msa0653020:intron	30.0%
	ACTTGAAACCCAAATTAAGT+AGG	+	chr4_3:60825027-60825046	None:intergenic	30.0%
!	AATTTGGGTTTCAAGTAGTT+TGG	-	chr4_3:60825031-60825050	Msa0653020:intron	30.0%
!!!	CACGGATGGATTATATTTTA+GGG	-	chr4_3:60825068-60825087	Msa0653020:intron	30.0%
!!!	ACGGATGGATTATATTTTAG+GGG	-	chr4_3:60825069-60825088	Msa0653020:intron	30.0%
	CAATGCATTATTATATGTCG+GGG	+	chr4_3:60825216-60825235	None:intergenic	30.0%
!	GTTTCATTGTTGTTGAAAGA+GGG	+	chr4_3:60825484-60825503	None:intergenic	30.0%
!	TGTTTCATTGTTGTTGAAAG+AGG	+	chr4_3:60825485-60825504	None:intergenic	30.0%
	ACTCAATACAAGTGAATGTA+TGG	+	chr4_3:60825709-60825728	None:intergenic	30.0%
	AACTCCCAAATTGAAAATCT+TGG	-	chr4_3:60825938-60825957	Msa0653020:intron	30.0%
	ACTCCCAAATTGAAAATCTT+GGG	-	chr4_3:60825939-60825958	Msa0653020:intron	30.0%
	TGAGTTCTTCACTAACTTTA+GGG	+	chr4_3:60826079-60826098	None:intergenic	30.0%
	ATGAGTTCTTCACTAACTTT+AGG	+	chr4_3:60826080-60826099	None:intergenic	30.0%
	AAATGCTAACAAGTTCTCTT+AGG	-	chr4_3:60826139-60826158	Msa0653020:intron	30.0%
	AATGCTAACAAGTTCTCTTA+GGG	-	chr4_3:60826140-60826159	Msa0653020:intron	30.0%
!!	TTGAGAGTGATTGTTATTTG+AGG	-	chr4_3:60826617-60826636	Msa0653020:intron	30.0%
	AAAGTTTCTACAACGGTTAA+AGG	-	chr4_3:60826708-60826727	Msa0653020:intron	30.0%
	CACATGATCCAATAAAAATG+GGG	+	chr4_3:60827074-60827093	None:intergenic	30.0%
	CCACATGATCCAATAAAAAT+GGG	+	chr4_3:60827075-60827094	None:intergenic	30.0%
!!	CCATTTTTATTGGATCATGT+GGG	-	chr4_3:60827073-60827092	Msa0653020:intron	30.0%
	TTGATCAGTATACAAGTGAA+AGG	+	chr4_3:60827184-60827203	None:intergenic	30.0%
!!	TGAGTTGAATTTGTTGTTTG+GGG	-	chr4_3:60827288-60827307	Msa0653020:intron	30.0%
	GTACATGATCAAGAAGTAAT+CGG	+	chr4_3:60827535-60827554	None:intergenic	30.0%
	TTGGGATTAAATTGGATCAA+CGG	+	chr4_3:60827571-60827590	None:intergenic	30.0%
	TTTCAGTTGGAAACCAAATT+AGG	-	chr4_3:60827711-60827730	Msa0653020:intron	30.0%
	TACACTATTGATGCAAGATT+TGG	-	chr4_3:60827904-60827923	Msa0653020:intron	30.0%
!	TATGTTGATGAGGATGAATA+AGG	+	chr4_3:60827932-60827951	None:intergenic	30.0%
!	AAAAGTGCAATTGACTATCA+AGG	-	chr4_3:60828163-60828182	Msa0653020:CDS	30.0%
	CATGATTGAAACAAAATCTC+AGG	-	chr4_3:60828217-60828236	Msa0653020:CDS	30.0%
	CTCAAACTATTCATATGAGG+AGG	+	chr4_3:60823932-60823951	None:intergenic	35.0%
!	GGCCTTTTTCCTTGAAATTA+TGG	-	chr4_3:60823998-60824017	Msa0653020:three_prime_UTR	35.0%
!	AAGAAGTTTGAGGTACAAAG+AGG	-	chr4_3:60824043-60824062	Msa0653020:three_prime_UTR	35.0%
	AAGAGAAGTTCCAAAAAAGC+TGG	-	chr4_3:60824155-60824174	Msa0653020:CDS	35.0%
!!!	ATTTGAGCTTCCAGCTTTTT+TGG	+	chr4_3:60824168-60824187	None:intergenic	35.0%
	GCCACCACCTAAAAAAAAAA+AGG	+	chr4_3:60824576-60824595	None:intergenic	35.0%
!!!	TTTTTTTTTTAGGTGGTGGC+CGG	-	chr4_3:60824576-60824595	Msa0653020:intron	35.0%
	TGCATAAAATATGCAAGGTC+CGG	+	chr4_3:60824612-60824631	None:intergenic	35.0%
	GCAAGCATAAATGTTGATGT+TGG	+	chr4_3:60824691-60824710	None:intergenic	35.0%
	CTTGGAACTAAAATAAGCAG+AGG	+	chr4_3:60824871-60824890	None:intergenic	35.0%
!	AGCAAGGTACCTACTTAATT+TGG	-	chr4_3:60825015-60825034	Msa0653020:intron	35.0%
!	GCAAGGTACCTACTTAATTT+GGG	-	chr4_3:60825016-60825035	Msa0653020:intron	35.0%
!!!	GCACGGATGGATTATATTTT+AGG	-	chr4_3:60825067-60825086	Msa0653020:intron	35.0%
!	AGATCAAAAGCACGTAGTTA+TGG	+	chr4_3:60825111-60825130	None:intergenic	35.0%
	TAAAGTGAATTCTAGCCACT+AGG	+	chr4_3:60825160-60825179	None:intergenic	35.0%
	TATCAACTGAGCTATGTTCA+CGG	-	chr4_3:60825239-60825258	Msa0653020:intron	35.0%
	AACAACAATGAAACAGAGAG+AGG	-	chr4_3:60825490-60825509	Msa0653020:intron	35.0%
!!	AGACATAAAAGTATCGGTTG+AGG	+	chr4_3:60825567-60825586	None:intergenic	35.0%
	ACATGATTTATTGCTGCGTA+CGG	-	chr4_3:60825611-60825630	Msa0653020:intron	35.0%
	AGGGTTCAATATAATGTTGG+AGG	+	chr4_3:60825873-60825892	None:intergenic	35.0%
!	TTCTTCACTAACTTTAGGGA+TGG	+	chr4_3:60826075-60826094	None:intergenic	35.0%
!!	AGAGTGATTGTTATTTGAGG+TGG	-	chr4_3:60826620-60826639	Msa0653020:intron	35.0%
!!	TGATTGTTATTTGAGGTGGA+AGG	-	chr4_3:60826624-60826643	Msa0653020:intron	35.0%
!!	GATTGTTATTTGAGGTGGAA+GGG	-	chr4_3:60826625-60826644	Msa0653020:intron	35.0%
!!	CCCATTTTTATTGGATCATG+TGG	-	chr4_3:60827072-60827091	Msa0653020:intron	35.0%
	CCCACATGATCCAATAAAAA+TGG	+	chr4_3:60827076-60827095	None:intergenic	35.0%
	CTCAATGTTGTGAAGCTTAT+AGG	+	chr4_3:60827272-60827291	None:intergenic	35.0%
	TGGGATTAAATTGGATCAAC+GGG	+	chr4_3:60827570-60827589	None:intergenic	35.0%
	AGAAAAACTCAAACTACTCC+AGG	+	chr4_3:60827690-60827709	None:intergenic	35.0%
	TTGTTTGTTCCCCATATTAG+TGG	-	chr4_3:60827991-60828010	Msa0653020:CDS	35.0%
	CATCAAATTCAGATAGTCCA+TGG	+	chr4_3:60828090-60828109	None:intergenic	35.0%
	ACTCAAAAAGAAGTTGCAGA+AGG	-	chr4_3:60828110-60828129	Msa0653020:CDS	35.0%
!	GATAGTCAATTGCACTTTTG+CGG	+	chr4_3:60828162-60828181	None:intergenic	35.0%
	AAAAAATGTCCCTCGGATTT+CGG	+	chr4_3:60828478-60828497	None:intergenic	35.0%
	GTATTGGAAAAAATGTCCCT+CGG	+	chr4_3:60828485-60828504	None:intergenic	35.0%
	TTTGTCGTGAACTAGCTAGA+GGG	+	chr4_3:60823794-60823813	None:intergenic	40.0%
	GCTAGTTCACGACAAAGAAA+TGG	-	chr4_3:60823798-60823817	Msa0653020:three_prime_UTR	40.0%
	TATTAGGACCACAAGTGGTA+TGG	+	chr4_3:60823829-60823848	None:intergenic	40.0%
	GAATGTATTAGGACCACAAG+TGG	+	chr4_3:60823834-60823853	None:intergenic	40.0%
!!	ACCTTGTTTCTAGATCTCTC+TGG	-	chr4_3:60823977-60823996	Msa0653020:three_prime_UTR	40.0%
	CAGAGGGAAAAAGAAGTTTG+AGG	-	chr4_3:60824033-60824052	Msa0653020:three_prime_UTR	40.0%
!!	AGAGGATACGGATTTTGAAG+AGG	-	chr4_3:60824088-60824107	Msa0653020:three_prime_UTR	40.0%
!!	TACGGATTTTGAAGAGGAAG+AGG	-	chr4_3:60824094-60824113	Msa0653020:three_prime_UTR	40.0%
!!	GATTTTGAAGAGGAAGAGGA+TGG	-	chr4_3:60824098-60824117	Msa0653020:exon	40.0%
!	TATTCCACCTTGTTGTCAAG+TGG	-	chr4_3:60824187-60824206	Msa0653020:CDS	40.0%
	CAATTCTCCACTTGACAACA+AGG	+	chr4_3:60824197-60824216	None:intergenic	40.0%
	GTGAAGCTAAGCAATATCAC+CGG	-	chr4_3:60824231-60824250	Msa0653020:intron	40.0%
!!!	TTTTTTTTTAGGTGGTGGCC+GGG	-	chr4_3:60824577-60824596	Msa0653020:intron	40.0%
	CATAAAATATGCAAGGTCCG+GGG	+	chr4_3:60824610-60824629	None:intergenic	40.0%
	GCATAAAATATGCAAGGTCC+GGG	+	chr4_3:60824611-60824630	None:intergenic	40.0%
	AAGTAGTTTGGTCCTGATCA+CGG	-	chr4_3:60825043-60825062	Msa0653020:intron	40.0%
!!!	TTTTTTGTCAGGTAGCCTAG+TGG	-	chr4_3:60825142-60825161	Msa0653020:intron	40.0%
!	ATATGAATAAGTGGGGTGTC+CGG	-	chr4_3:60825182-60825201	Msa0653020:intron	40.0%
	ATCAACTGAGCTATGTTCAC+GGG	-	chr4_3:60825240-60825259	Msa0653020:intron	40.0%
!	TGTCTGAAGTTCTCTTCAGA+TGG	-	chr4_3:60825582-60825601	Msa0653020:intron	40.0%
!	GTCTGAAGTTCTCTTCAGAT+GGG	-	chr4_3:60825583-60825602	Msa0653020:intron	40.0%
!	TCTGAAGTTCTCTTCAGATG+GGG	-	chr4_3:60825584-60825603	Msa0653020:intron	40.0%
	ATGTATGGATGACCCATTCA+TGG	+	chr4_3:60825694-60825713	None:intergenic	40.0%
	AAGATTTCTCAACACTACCC+TGG	-	chr4_3:60825967-60825986	Msa0653020:intron	40.0%
	GTTTCTACAACGGTTAAAGG+TGG	-	chr4_3:60826711-60826730	Msa0653020:intron	40.0%
!!!	GTGGTTTTAGTAGTGGTCAA+CGG	-	chr4_3:60826742-60826761	Msa0653020:intron	40.0%
	TTTATCACCTCTGATCGTTG+TGG	+	chr4_3:60826876-60826895	None:intergenic	40.0%
	AACGATCAGAGGTGATAAAG+TGG	-	chr4_3:60826877-60826896	Msa0653020:intron	40.0%
	TGGTGTCTAATTCACTTGAG+CGG	+	chr4_3:60827122-60827141	None:intergenic	40.0%
!	TGTTGTTTGGGGAAGAAACA+CGG	-	chr4_3:60827299-60827318	Msa0653020:intron	40.0%
	TTAGTGGGGAATCAAACTGA+TGG	+	chr4_3:60827349-60827368	None:intergenic	40.0%
	AAATCACGAAGACACATACG+AGG	-	chr4_3:60827474-60827493	Msa0653020:intron	40.0%
	AATCACGAAGACACATACGA+GGG	-	chr4_3:60827475-60827494	Msa0653020:intron	40.0%
	GTGTACGTCTTATGTTGATG+AGG	+	chr4_3:60827942-60827961	None:intergenic	40.0%
!	TGACAGAAGATAGAGAGCAT+TGG	+	chr4_3:60828281-60828300	None:intergenic	40.0%
	ATTACTTTCTCCGAAATCCG+AGG	-	chr4_3:60828465-60828484	Msa0653020:five_prime_UTR	40.0%
	TTACTTTCTCCGAAATCCGA+GGG	-	chr4_3:60828466-60828485	Msa0653020:five_prime_UTR	40.0%
	CTTTGTCGTGAACTAGCTAG+AGG	+	chr4_3:60823795-60823814	None:intergenic	45.0%
	TGGTAAGACCATACCACTTG+TGG	-	chr4_3:60823818-60823837	Msa0653020:three_prime_UTR	45.0%
	GCCAGAGAGATCTAGAAACA+AGG	+	chr4_3:60823981-60824000	None:intergenic	45.0%
	TATGGAGACAAGAAGGTCAG+AGG	-	chr4_3:60824016-60824035	Msa0653020:three_prime_UTR	45.0%
	ATGGAGACAAGAAGGTCAGA+GGG	-	chr4_3:60824017-60824036	Msa0653020:three_prime_UTR	45.0%
	GAGGTACAAAGAGGATCATG+AGG	-	chr4_3:60824052-60824071	Msa0653020:three_prime_UTR	45.0%
	GTACAAAGAGGATCATGAGG+AGG	-	chr4_3:60824055-60824074	Msa0653020:three_prime_UTR	45.0%
	GGAAGAAGAGGAAGAGGATA+CGG	-	chr4_3:60824076-60824095	Msa0653020:three_prime_UTR	45.0%
	AAGAGGAAGAGGATGGTAGA+AGG	-	chr4_3:60824105-60824124	Msa0653020:exon	45.0%
	AAGAGGATGGTAGAAGGAAG+AGG	-	chr4_3:60824111-60824130	Msa0653020:exon	45.0%
	AGAGGATGGTAGAAGGAAGA+GGG	-	chr4_3:60824112-60824131	Msa0653020:exon	45.0%
	TTCTCCACTTGACAACAAGG+TGG	+	chr4_3:60824194-60824213	None:intergenic	45.0%
	GCAATATCACCGGAGACATA+AGG	-	chr4_3:60824241-60824260	Msa0653020:intron	45.0%
	ACTCACAGACCTTATGTCTC+CGG	+	chr4_3:60824253-60824272	None:intergenic	45.0%
	AATGTGTACGGTAGGTGCTT+TGG	+	chr4_3:60824282-60824301	None:intergenic	45.0%
	AATCCTGCAATGTGTACGGT+AGG	+	chr4_3:60824290-60824309	None:intergenic	45.0%
	CTGCAATCCTGCAATGTGTA+CGG	+	chr4_3:60824294-60824313	None:intergenic	45.0%
	ACATTGCAGGATTGCAGCAA+AGG	-	chr4_3:60824297-60824316	Msa0653020:intron	45.0%
!!	GGTTTTGTCAGCAATGTAGC+AGG	-	chr4_3:60824318-60824337	Msa0653020:intron	45.0%
!!!	TTTTTTTTAGGTGGTGGCCG+GGG	-	chr4_3:60824578-60824597	Msa0653020:intron	45.0%
!	TGAGCTTAGCTCAGTTGGTA+TGG	+	chr4_3:60824639-60824658	None:intergenic	45.0%
	TACCAACTGAGCTAAGCTCA+CGG	-	chr4_3:60824639-60824658	Msa0653020:intron	45.0%
!	TATGAATAAGTGGGGTGTCC+GGG	-	chr4_3:60825183-60825202	Msa0653020:intron	45.0%
	CTGAAGTTCTCTTCAGATGG+GGG	-	chr4_3:60825585-60825604	Msa0653020:intron	45.0%
	ATTGCTGCGTACGGTGTATT+CGG	-	chr4_3:60825620-60825639	Msa0653020:intron	45.0%
	GGATGGAATCAGTGACATAC+TGG	+	chr4_3:60826058-60826077	None:intergenic	45.0%
!	TGTTATTTGAGGTGGAAGGG+TGG	-	chr4_3:60826628-60826647	Msa0653020:intron	45.0%
	CTACAACGGTTAAAGGTGGT+TGG	-	chr4_3:60826715-60826734	Msa0653020:intron	45.0%
!!!	TGGAGTGGTGGTTTTAGTAG+TGG	-	chr4_3:60826735-60826754	Msa0653020:intron	45.0%
!!	GTTTTAGTAGTGGTCAACGG+TGG	-	chr4_3:60826745-60826764	Msa0653020:intron	45.0%
	ACGGTGGTCATAGTAGTGTT+TGG	-	chr4_3:60826761-60826780	Msa0653020:intron	45.0%
	GTGGTCATAGTAGTGTTTGG+TGG	-	chr4_3:60826764-60826783	Msa0653020:intron	45.0%
	ATGTAGTCGCAACCTTAGAG+TGG	-	chr4_3:60826789-60826808	Msa0653020:intron	45.0%
	CCACTTTGATCACCACTCTA+AGG	+	chr4_3:60826804-60826823	None:intergenic	45.0%
	CCTTAGAGTGGTGATCAAAG+TGG	-	chr4_3:60826801-60826820	Msa0653020:intron	45.0%
	AGAGTGGTGATCAAAGTGGT+TGG	-	chr4_3:60826805-60826824	Msa0653020:intron	45.0%
	GATCAGAGGTGATAAAGTGG+TGG	-	chr4_3:60826880-60826899	Msa0653020:intron	45.0%
	ATAAAGTGGTGGTCGACAGT+GGG	-	chr4_3:60826891-60826910	Msa0653020:intron	45.0%
	TGGTAGTCGTAGTGGTGATT+AGG	-	chr4_3:60826929-60826948	Msa0653020:intron	45.0%
	CTAAATTAACACATCGCCGC+TGG	+	chr4_3:60826960-60826979	None:intergenic	45.0%
	CAGCGGCGATGTGTTAATTT+AGG	-	chr4_3:60826958-60826977	Msa0653020:intron	45.0%
	GTGTCTAATTCACTTGAGCG+GGG	+	chr4_3:60827120-60827139	None:intergenic	45.0%
	GGTGTCTAATTCACTTGAGC+GGG	+	chr4_3:60827121-60827140	None:intergenic	45.0%
	ATCACGAAGACACATACGAG+GGG	-	chr4_3:60827476-60827495	Msa0653020:intron	45.0%
!!	AAGAAGTTGCAGAAGGCGTT+TGG	-	chr4_3:60828117-60828136	Msa0653020:CDS	45.0%
	AGAGACCAGCAACATACGAA+GGG	+	chr4_3:60828249-60828268	None:intergenic	45.0%
	TAGAGACCAGCAACATACGA+AGG	+	chr4_3:60828250-60828269	None:intergenic	45.0%
!	TCGTATGTTGCTGGTCTCTA+AGG	-	chr4_3:60828250-60828269	Msa0653020:CDS	45.0%
!!!	TATATATTTTTGTTTAATTA+AGG	-	chr4_3:60824396-60824415	Msa0653020:intron	5.0%
	GGATCATGAGGAGGAAGAAG+AGG	-	chr4_3:60824064-60824083	Msa0653020:three_prime_UTR	50.0%
	TGAGGAGGAAGAAGAGGAAG+AGG	-	chr4_3:60824070-60824089	Msa0653020:three_prime_UTR	50.0%
	ACCAACTGAGCTAAGCTCAC+GGG	-	chr4_3:60824640-60824659	Msa0653020:intron	50.0%
!	ATGAATAAGTGGGGTGTCCG+GGG	-	chr4_3:60825184-60825203	Msa0653020:intron	50.0%
	TTGCTGCGTACGGTGTATTC+GGG	-	chr4_3:60825621-60825640	Msa0653020:intron	50.0%
	GCTGTTGGAGCGATGATTAG+TGG	-	chr4_3:60826650-60826669	Msa0653020:intron	50.0%
!	TGGAGCGATGATTAGTGGAC+AGG	-	chr4_3:60826655-60826674	Msa0653020:intron	50.0%
!	AGCGATGATTAGTGGACAGG+TGG	-	chr4_3:60826658-60826677	Msa0653020:intron	50.0%
	TTGATCACTCCCAACCGTTG+TGG	+	chr4_3:60826684-60826703	None:intergenic	50.0%
	ACGGTTAAAGGTGGTTGGAG+TGG	-	chr4_3:60826720-60826739	Msa0653020:intron	50.0%
	GTTAAAGGTGGTTGGAGTGG+TGG	-	chr4_3:60826723-60826742	Msa0653020:intron	50.0%
	TGATCAAAGTGGTTGGCGTG+AGG	-	chr4_3:60826812-60826831	Msa0653020:intron	50.0%
!!	AGGTTTGCTGCTGGTTGAAG+TGG	-	chr4_3:60826832-60826851	Msa0653020:intron	50.0%
	GATAAAGTGGTGGTCGACAG+TGG	-	chr4_3:60826890-60826909	Msa0653020:intron	50.0%
	ACAGTGGGTAGAGTTGTGCT+CGG	-	chr4_3:60826906-60826925	Msa0653020:intron	50.0%
	TGGTGATTAGGATCCACCAG+CGG	-	chr4_3:60826941-60826960	Msa0653020:intron	50.0%
	AATTAACACATCGCCGCTGG+TGG	+	chr4_3:60826957-60826976	None:intergenic	50.0%
	GGATCATGTGGGAAGTTCAG+AGG	-	chr4_3:60827084-60827103	Msa0653020:intron	50.0%
	GTTTGGCTGGGCATAATGAG+AGG	-	chr4_3:60828134-60828153	Msa0653020:CDS	50.0%
	TCAAGCCCTTCGTATGTTGC+TGG	-	chr4_3:60828241-60828260	Msa0653020:CDS	50.0%
	GCACCTACCGTACACATTGC+AGG	-	chr4_3:60824284-60824303	Msa0653020:intron	55.0%
	CCAACTGAGCTAAGCTCACG+GGG	-	chr4_3:60824641-60824660	Msa0653020:intron	55.0%
	GGAGGTGGAGACATGCTTCT+TGG	-	chr4_3:60824803-60824822	Msa0653020:intron	55.0%
	TTGGTCCTGATCACGGTGCA+CGG	-	chr4_3:60825050-60825069	Msa0653020:intron	55.0%
	ATATGTCGGGGTTCGAACCC+CGG	+	chr4_3:60825204-60825223	None:intergenic	55.0%
!	TAGTGGACAGGTGGCCACAA+CGG	-	chr4_3:60826667-60826686	Msa0653020:intron	55.0%
	CATGCAGCCACAACGATCAG+AGG	-	chr4_3:60826866-60826885	Msa0653020:intron	55.0%
!!	AGTTGCAGAAGGCGTTTGGC+TGG	-	chr4_3:60828121-60828140	Msa0653020:CDS	55.0%
!!	GTTGCAGAAGGCGTTTGGCT+GGG	-	chr4_3:60828122-60828141	Msa0653020:CDS	55.0%
	AAGGTCCGGGGTTCAAACCC+CGG	+	chr4_3:60824598-60824617	None:intergenic	60.0%
	CCCCGTGAGCTTAGCTCAGT+TGG	+	chr4_3:60824644-60824663	None:intergenic	60.0%
	TCCTGATCACGGTGCACGGA+TGG	-	chr4_3:60825054-60825073	Msa0653020:intron	60.0%
	TCCATCCGTGCACCGTGATC+AGG	+	chr4_3:60825058-60825077	None:intergenic	60.0%
	TGAGGTGGAAGGGTGGCTGT+TGG	-	chr4_3:60826635-60826654	Msa0653020:intron	60.0%
	GACAGGTGGCCACAACGGTT+GGG	-	chr4_3:60826672-60826691	Msa0653020:intron	60.0%
!!	GTTGGCGTGAGGTTTGCTGC+TGG	-	chr4_3:60826823-60826842	Msa0653020:intron	60.0%
	GTGGGTAGAGTTGTGCTCGG+TGG	-	chr4_3:60826909-60826928	Msa0653020:intron	60.0%
!	GTGCTCGGTGGTAGTCGTAG+TGG	-	chr4_3:60826921-60826940	Msa0653020:intron	60.0%
	GGACAGGTGGCCACAACGGT+TGG	-	chr4_3:60826671-60826690	Msa0653020:intron	65.0%
	GGTGGCCGGGGTTTGAACCC+CGG	-	chr4_3:60824590-60824609	Msa0653020:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	60823780	60828528	60823780	ID=Msa0653020;Name=Msa0653020
chr4_3	mRNA	60823780	60828528	60823780	ID=Msa0653020-mRNA-1;Parent=Msa0653020;Name=Msa0653020-mRNA-1;_AED=0.01;_eAED=0.01;_QI=237\|1\|1\|1\|1\|1\|2\|336\|143
chr4_3	exon	60823780	60824224	60823780	ID=Msa0653020-mRNA-1:exon:16577;Parent=Msa0653020-mRNA-1
chr4_3	exon	60827969	60828528	60827969	ID=Msa0653020-mRNA-1:exon:16576;Parent=Msa0653020-mRNA-1
chr4_3	five_prime_UTR	60828292	60828528	60828292	ID=Msa0653020-mRNA-1:five_prime_utr;Parent=Msa0653020-mRNA-1
chr4_3	CDS	60827969	60828291	60827969	ID=Msa0653020-mRNA-1:cds;Parent=Msa0653020-mRNA-1
chr4_3	CDS	60824116	60824224	60824116	ID=Msa0653020-mRNA-1:cds;Parent=Msa0653020-mRNA-1
chr4_3	three_prime_UTR	60823780	60824115	60823780	ID=Msa0653020-mRNA-1:three_prime_utr;Parent=Msa0653020-mRNA-1

Gene Sequence

>Msa0653020

ATGGAGACAAGAAGGTCAGAGGGAAAAAGAAGTTTGAGGTACAAAGAGGATCATGAGGAGGAAGAAGAGGAAGAGGATACGGATTTTGAAGAGGAAGAGGATGGTAGAAGGAAGAGGGTAGTGACAGATCTCTATAGCAAGAGAAGTTCCAAAAAAGCTGGAAGCTCAAATATTCCACCTTGTTGTCAAGTGGAGAATTGTGATGCTGATCTTAGTGAAGCTAAGCAATATCACCGGAGACATAAGGTCTGTGAGTATCATGCCAAAGCACCTACCGTACACATTGCAGGATTGCAGCAAAGGTTTTGTCAGCAATGTAGCAGATTCCATGGACTATCTGAATTTGATGACTCAAAAAGAAGTTGCAGAAGGCGTTTGGCTGGGCATAATGAGAGGCGCCGCAAAAGTGCAATTGACTATCAAGGAGAATGA

Protein sequence

>Msa0653020

METRRSEGKRSLRYKEDHEEEEEEEDTDFEEEEDGRRKRVVTDLYSKRSSKKAGSSNIPPCCQVENCDADLSEAKQYHRRHKVCEYHAKAPTVHIAGLQQRFCQQCSRFHGLSEFDDSKRSCRRRLAGHNERRRKSAIDYQGE*