Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590150 | XP_013454883.1 | 98.973 | 487 | 5 | 0 | 1 | 487 | 1 | 487 | 0.0 | 975 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590150 | sp|Q84KJ6|AMT31_ORYSJ | 70.122 | 492 | 141 | 2 | 2 | 487 | 7 | 498 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0590150 | 0.815562 | 8.676220e-52 | -8.615850e-47 |
| Msa0030700 | Msa0590150 | 0.808563 | 2.913245e-50 | -8.615850e-47 |
| Msa0081020 | Msa0590150 | 0.801986 | 6.948526e-49 | -8.615850e-47 |
| Msa0168310 | Msa0590150 | 0.828894 | 6.974409e-55 | -8.615850e-47 |
| Msa0217700 | Msa0590150 | 0.809215 | 2.112123e-50 | -8.615850e-47 |
| Msa0434290 | Msa0590150 | 0.806944 | 6.432585e-50 | -8.615850e-47 |
| Msa0457560 | Msa0590150 | 0.819228 | 1.296766e-52 | -8.615850e-47 |
| Msa0244640 | Msa0590150 | 0.815971 | 7.031463e-52 | -8.615850e-47 |
| Msa0337580 | Msa0590150 | 0.817969 | 2.502536e-52 | -8.615850e-47 |
| Msa0513970 | Msa0590150 | 0.827806 | 1.276471e-54 | -8.615850e-47 |
| Msa0534150 | Msa0590150 | 0.927235 | 1.558312e-91 | -8.615850e-47 |
| Msa0590150 | Msa0630730 | 0.926176 | 6.720166e-91 | -8.615850e-47 |
| Msa0590150 | Msa0668880 | 0.929689 | 4.842444e-93 | -8.615850e-47 |
| Msa0590150 | Msa0674560 | 0.811626 | 6.371437e-51 | -8.615850e-47 |
| Msa0590150 | Msa0711150 | 0.813570 | 2.393515e-51 | -8.615850e-47 |
| Msa0590150 | Msa0733010 | 0.843096 | 1.729090e-58 | -8.615850e-47 |
| Msa0590150 | Msa0738340 | 0.808075 | 3.701054e-50 | -8.615850e-47 |
| Msa0590150 | Msa0773990 | 0.803734 | 3.026764e-49 | -8.615850e-47 |
| Msa0590150 | Msa0823370 | 0.824805 | 6.615253e-54 | -8.615850e-47 |
| Msa0590150 | Msa0830230 | 0.801640 | 8.184162e-49 | -8.615850e-47 |
| Msa0590150 | Msa0833530 | 0.813922 | 2.003138e-51 | -8.615850e-47 |
| Msa0590150 | Msa0857940 | 0.800268 | 1.561086e-48 | -8.615850e-47 |
| Msa0590150 | Msa0878220 | 0.811961 | 5.386345e-51 | -8.615850e-47 |
| Msa0590150 | Msa0943970 | 0.800310 | 1.530583e-48 | -8.615850e-47 |
| Msa0590150 | Msa1048220 | 0.829254 | 5.704018e-55 | -8.615850e-47 |
| Msa0590150 | Msa1155170 | -0.809763 | 1.611102e-50 | -8.615850e-47 |
| Msa0590150 | Msa1213890 | 0.813798 | 2.133042e-51 | -8.615850e-47 |
| Msa0590150 | Msa1281690 | 0.838383 | 2.971025e-57 | -8.615850e-47 |
| Msa0590150 | Msa1380220 | 0.824557 | 7.566416e-54 | -8.615850e-47 |
| Msa0590150 | Msa1417380 | 0.819835 | 9.425299e-53 | -8.615850e-47 |
| Msa0590150 | Msa1434220 | 0.802425 | 5.645194e-49 | -8.615850e-47 |
| Msa0590150 | Msa1442920 | 0.806078 | 9.794219e-50 | -8.615850e-47 |
| Msa0590150 | Msa1452710 | 0.834690 | 2.590018e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590150 | MtrunA17_Chr7g0243071 | 84.221 | 488 | 75 | 2 | 1 | 487 | 1 | 487 | 0.0 | 807 |
| Msa0590150 | MtrunA17_Chr8g0385081 | 71.186 | 472 | 130 | 2 | 2 | 467 | 8 | 479 | 0.0 | 650 |
| Msa0590150 | MtrunA17_Chr4g0007621 | 99.035 | 311 | 3 | 0 | 1 | 311 | 1 | 311 | 0.0 | 628 |
| Msa0590150 | MtrunA17_Chr1g0163571 | 61.317 | 486 | 159 | 6 | 12 | 487 | 14 | 480 | 0.0 | 566 |
| Msa0590150 | MtrunA17_Chr7g0274111 | 53.673 | 490 | 191 | 8 | 1 | 475 | 1 | 469 | 1.42e-179 | 512 |
| Msa0590150 | MtrunA17_Chr8g0371171 | 57.299 | 274 | 103 | 5 | 215 | 481 | 37 | 303 | 4.29e-102 | 308 |
| Msa0590150 | MtrunA17_Chr4g0007611 | 96.575 | 146 | 5 | 0 | 342 | 487 | 7 | 152 | 2.04e-96 | 287 |
| Msa0590150 | MtrunA17_Chr8g0371161 | 58.716 | 218 | 65 | 4 | 5 | 215 | 6 | 205 | 3.45e-74 | 233 |
| Msa0590150 | MtrunA17_Chr1g0168631 | 27.593 | 482 | 278 | 17 | 22 | 466 | 48 | 495 | 3.40e-24 | 105 |
| Msa0590150 | MtrunA17_Chr1g0189971 | 27.766 | 479 | 273 | 19 | 22 | 463 | 47 | 489 | 2.49e-22 | 100 |
| Msa0590150 | MtrunA17_Chr7g0262361 | 25.157 | 477 | 286 | 15 | 22 | 463 | 47 | 487 | 5.26e-17 | 83.6 |
| Msa0590150 | MtrunA17_Chr3g0104661 | 23.577 | 492 | 284 | 14 | 23 | 470 | 14 | 457 | 4.62e-16 | 80.5 |
| Msa0590150 | MtrunA17_Chr7g0272721 | 25.625 | 480 | 276 | 18 | 22 | 461 | 47 | 485 | 6.16e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590150 | AT2G38290.1 | 72.671 | 483 | 120 | 2 | 6 | 487 | 4 | 475 | 0.0 | 704 |
| Msa0590150 | AT2G38290.2 | 75.766 | 359 | 86 | 1 | 130 | 487 | 1 | 359 | 0.0 | 540 |
| Msa0590150 | AT4G13510.1 | 26.427 | 473 | 281 | 14 | 22 | 461 | 42 | 480 | 1.92e-23 | 103 |
| Msa0590150 | AT1G64780.1 | 25.764 | 458 | 281 | 12 | 22 | 449 | 52 | 480 | 2.39e-23 | 103 |
| Msa0590150 | AT3G24300.1 | 26.446 | 484 | 273 | 17 | 22 | 464 | 46 | 487 | 1.39e-22 | 100 |
| Msa0590150 | AT3G24290.1 | 26.247 | 461 | 270 | 12 | 22 | 448 | 46 | 470 | 1.19e-20 | 95.1 |
| Msa0590150 | AT4G28700.1 | 26.681 | 461 | 271 | 14 | 22 | 448 | 51 | 478 | 5.71e-20 | 93.2 |
Find 125 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCTGACTCATAAATTTA+TGG | 0.137091 | 4_2:+13561148 | None:intergenic |
| GTGGATTCACTGCAGCTTAT+TGG | 0.194340 | 4_2:-13564263 | Msa0590150:CDS |
| TTGAAGAAATGAGTGCTTTC+AGG | 0.206489 | 4_2:+13564561 | None:intergenic |
| TATGTTATTCATCTTTCTTC+TGG | 0.220707 | 4_2:-13564291 | Msa0590150:CDS |
| TTCAGTGATTGGAGCTGTTC+AGG | 0.233610 | 4_2:-13563598 | Msa0590150:CDS |
| ACTTTGGATGTTGCTTTCTT+TGG | 0.270509 | 4_2:-13563627 | Msa0590150:CDS |
| AATTCAAGGGGAGCCTTCTA+TGG | 0.272145 | 4_2:-13561452 | Msa0590150:CDS |
| ATTCATCTTTCTTCTGGAAT+TGG | 0.280645 | 4_2:-13564285 | Msa0590150:CDS |
| CGAGGAAGCTTATGCACTTT+GGG | 0.285767 | 4_2:-13561267 | Msa0590150:CDS |
| TGGATTCACTGCAGCTTATT+GGG | 0.318741 | 4_2:-13564262 | Msa0590150:intron |
| TTAGGTTACCGTATGGCTTT+TGG | 0.321290 | 4_2:-13564660 | Msa0590150:CDS |
| GGCTATGAATTCAGCTTTCA+TGG | 0.322861 | 4_2:-13564724 | Msa0590150:CDS |
| GAAGTATCACCCTATGTTAC+TGG | 0.331682 | 4_2:-13561185 | Msa0590150:CDS |
| CTGTGAGGAGGCCTCCTAAA+AGG | 0.337602 | 4_2:+13561522 | None:intergenic |
| TTTGGTAAGCCTTCAGTGAT+TGG | 0.339494 | 4_2:-13563609 | Msa0590150:CDS |
| AGCATAAGCAATACATTGTT+TGG | 0.347245 | 4_2:+13563783 | None:intergenic |
| TTCTTGCAAGAATGAACATT+AGG | 0.353505 | 4_2:-13564428 | Msa0590150:CDS |
| TCTTGCAAGAATGAACATTA+GGG | 0.362365 | 4_2:-13564427 | Msa0590150:CDS |
| ATAGTGATGGGAATACTATC+TGG | 0.375245 | 4_2:-13562675 | Msa0590150:CDS |
| GGTAAAGGTGCACCTTCATT+AGG | 0.379029 | 4_2:-13564615 | Msa0590150:CDS |
| GCCGCCGCCATGCCCATAGA+AGG | 0.393092 | 4_2:+13561439 | None:intergenic |
| TGGGGTGTCATTGATTTCTC+TGG | 0.400224 | 4_2:-13564318 | Msa0590150:CDS |
| TTGTTATGGATGGGTTGGTC+AGG | 0.408273 | 4_2:-13563747 | Msa0590150:CDS |
| GGTGCACCTTTACCCCAAAA+AGG | 0.410949 | 4_2:+13564624 | None:intergenic |
| CATCTTTCTTCTGGAATTGG+TGG | 0.415049 | 4_2:-13564282 | Msa0590150:CDS |
| ATAGAAGGCTCCCCTTGAAT+TGG | 0.424952 | 4_2:+13561454 | None:intergenic |
| GCCTTCTATGGGCATGGCGG+CGG | 0.425599 | 4_2:-13561440 | Msa0590150:CDS |
| GCTTATGCACTTTGGGGTGA+TGG | 0.431224 | 4_2:-13561260 | Msa0590150:CDS |
| GTTTGCATCACTCCTGGAGC+AGG | 0.433827 | 4_2:-13563558 | Msa0590150:intron |
| TCAGTGATTGGAGCTGTTCA+GGG | 0.436259 | 4_2:-13563597 | Msa0590150:CDS |
| GCGAGGAAGCTTATGCACTT+TGG | 0.438004 | 4_2:-13561268 | Msa0590150:CDS |
| GATGAGGATCCATGCTTAGT+TGG | 0.439794 | 4_2:+13561224 | None:intergenic |
| ATGAGGATCCATGCTTAGTT+GGG | 0.442073 | 4_2:+13561225 | None:intergenic |
| CAAGAATGAACATTAGGGCT+TGG | 0.444025 | 4_2:-13564422 | Msa0590150:CDS |
| TCAGTTCTTGAAGCAATTAG+TGG | 0.444371 | 4_2:-13561414 | Msa0590150:CDS |
| GGCCAAGGTTGAAGAGTGAT+AGG | 0.447646 | 4_2:-13563818 | Msa0590150:CDS |
| TGGCAGGGCTTGTGCAGTCA+TGG | 0.448163 | 4_2:-13562704 | Msa0590150:intron |
| AGCACTCATTTCTTCAAGAA+TGG | 0.450618 | 4_2:-13564555 | Msa0590150:CDS |
| TCTTTGCAGACTCATATTGC+CGG | 0.453439 | 4_2:-13561480 | Msa0590150:CDS |
| TCCCTATCACTCTTCAACCT+TGG | 0.457019 | 4_2:+13563816 | None:intergenic |
| GGACTTGTTTGCATCACTCC+TGG | 0.458843 | 4_2:-13563564 | Msa0590150:CDS |
| GAAGTCAACTCTTCTACAAA+AGG | 0.471992 | 4_2:-13562616 | Msa0590150:intron |
| TCGAACGACCAGCTCGAGAC+TGG | 0.475810 | 4_2:-13561308 | Msa0590150:CDS |
| CAGGATTGTTATGGATGGGT+TGG | 0.479032 | 4_2:-13563752 | Msa0590150:CDS |
| TTGCTTATGCTAGCAGGTGC+AGG | 0.486246 | 4_2:-13563771 | Msa0590150:CDS |
| GAGTCAATGTTTGCTGCATA+TGG | 0.486969 | 4_2:+13563708 | None:intergenic |
| GCATGCTTTGTAGACCAACT+AGG | 0.489380 | 4_2:+13564790 | None:intergenic |
| AATGAACATTAGGGCTTGGA+TGG | 0.496494 | 4_2:-13564418 | Msa0590150:CDS |
| TCTCCTAGTGTGGACCACTT+TGG | 0.497317 | 4_2:-13563643 | Msa0590150:CDS |
| AATGTATTGCTTATGCTAGC+AGG | 0.508189 | 4_2:-13563777 | Msa0590150:CDS |
| GTAGAAGAGTTGACTTCTTG+TGG | 0.508479 | 4_2:+13562622 | None:intergenic |
| GTTGGTCTACAAAGCATGCC+AGG | 0.511038 | 4_2:-13564786 | Msa0590150:CDS |
| TATTGCCGGTGACCAATTCA+AGG | 0.517642 | 4_2:-13561466 | Msa0590150:CDS |
| GGCAGGGCTTGTGCAGTCAT+GGG | 0.521391 | 4_2:-13562703 | Msa0590150:intron |
| AATATGAGTCTGCAAAGATC+TGG | 0.521520 | 4_2:+13561485 | None:intergenic |
| ATGCATCAGTACTAATATGT+TGG | 0.524273 | 4_2:-13564689 | Msa0590150:CDS |
| TAGCAGGTGCAGGATTGTTA+TGG | 0.525281 | 4_2:-13563761 | Msa0590150:CDS |
| TTTATAGACAAACCTGCTCC+AGG | 0.525389 | 4_2:+13563546 | None:intergenic |
| ACCTCTTGCCCCAGTAACAT+AGG | 0.525904 | 4_2:+13561175 | None:intergenic |
| ATGGGTTGGTCAGGATTCAA+TGG | 0.526672 | 4_2:-13563738 | Msa0590150:CDS |
| AGGTGCAGGATTGTTATGGA+TGG | 0.529331 | 4_2:-13563757 | Msa0590150:CDS |
| TCTCCTTTGTTTAGCCATTG+TGG | 0.531344 | 4_2:+13564840 | None:intergenic |
| CCCTATGTTACTGGGGCAAG+AGG | 0.535754 | 4_2:-13561176 | Msa0590150:CDS |
| ATGACAGCATCAACCCTAGT+TGG | 0.538896 | 4_2:-13564804 | Msa0590150:CDS |
| AAGTATCACCCTATGTTACT+GGG | 0.541502 | 4_2:-13561184 | Msa0590150:CDS |
| TTTAGCCATTGTGGTGATGA+AGG | 0.544202 | 4_2:+13564849 | None:intergenic |
| CATCCAAAGTGGTCCACACT+AGG | 0.544890 | 4_2:+13563640 | None:intergenic |
| TATTCCATGGTGGACTATGA+TGG | 0.546570 | 4_2:-13562649 | Msa0590150:CDS |
| CATGCTTTGTAGACCAACTA+GGG | 0.550313 | 4_2:+13564791 | None:intergenic |
| TAAGAGAAAATGAGCCAAAG+AGG | 0.550720 | 4_2:+13564387 | None:intergenic |
| TAAGCAATACATTGTTTGGT+GGG | 0.551524 | 4_2:+13563787 | None:intergenic |
| TTTCACACACATGCTGTGGC+CGG | 0.552024 | 4_2:-13561545 | Msa0590150:CDS |
| GGTGTCATTGATTTCTCTGG+TGG | 0.552125 | 4_2:-13564315 | Msa0590150:CDS |
| TAGTGATGGGAATACTATCT+GGG | 0.552494 | 4_2:-13562674 | Msa0590150:CDS |
| AAGTATGACCCAACTAAGCA+TGG | 0.559295 | 4_2:-13561233 | Msa0590150:CDS |
| GCTCTTGGTATGCTGTTGGA+AGG | 0.561258 | 4_2:+13564877 | None:intergenic |
| GCTGTTCAGGGTATGATGAC+AGG | 0.562744 | 4_2:-13563585 | Msa0590150:CDS |
| GTGATGAAGGAAGGTGCTCT+TGG | 0.563434 | 4_2:+13564862 | None:intergenic |
| TACTATCTGGGAGTATTCCA+TGG | 0.563931 | 4_2:-13562662 | Msa0590150:CDS |
| ATTCAAGGGGAGCCTTCTAT+GGG | 0.564319 | 4_2:-13561451 | Msa0590150:CDS |
| ATAAGCAATACATTGTTTGG+TGG | 0.568631 | 4_2:+13563786 | None:intergenic |
| GAAGAGAAGAATTAGTGTGG+TGG | 0.570040 | 4_2:+13561358 | None:intergenic |
| CTCTTGGTATGCTGTTGGAA+GGG | 0.571295 | 4_2:+13564878 | None:intergenic |
| CTGGTCGTTCGACATCCTCA+AGG | 0.571654 | 4_2:+13561319 | None:intergenic |
| AGGTGCTCTTGGTATGCTGT+TGG | 0.575427 | 4_2:+13564873 | None:intergenic |
| CATCATCGCCAGTCTCGAGC+TGG | 0.582123 | 4_2:+13561300 | None:intergenic |
| TCATGGGCAGCTATAGTGAT+GGG | 0.585092 | 4_2:-13562687 | Msa0590150:CDS |
| AGGGGAGCCTTCTATGGGCA+TGG | 0.589588 | 4_2:-13561446 | Msa0590150:CDS |
| CTGCAACTAGTCTCCTAGTG+TGG | 0.595858 | 4_2:-13563653 | Msa0590150:CDS |
| GTCATGGGCAGCTATAGTGA+TGG | 0.598047 | 4_2:-13562688 | Msa0590150:CDS |
| GCTCCCCTTGAATTGGTCAC+CGG | 0.599961 | 4_2:+13561461 | None:intergenic |
| GTTCATCACCAAAAGCCATA+CGG | 0.600057 | 4_2:+13564652 | None:intergenic |
| ACACAGGTAGATGACACCCT+TGG | 0.601482 | 4_2:-13561572 | Msa0590150:intron |
| GAGGAGGCCTCCTAAAAGGC+CGG | 0.601994 | 4_2:+13561526 | None:intergenic |
| CCTCTTGCCCCAGTAACATA+GGG | 0.604247 | 4_2:+13561176 | None:intergenic |
| GAGGAAGCTTATGCACTTTG+GGG | 0.606601 | 4_2:-13561266 | Msa0590150:CDS |
| GGAGCCTTCTATGGGCATGG+CGG | 0.613135 | 4_2:-13561443 | Msa0590150:CDS |
| AAATAAACAAGTGAAGCCAT+AGG | 0.617576 | 4_2:+13564498 | None:intergenic |
| GCCATTGTGGTGATGAAGGA+AGG | 0.619330 | 4_2:+13564853 | None:intergenic |
| ATTGCCGGTGACCAATTCAA+GGG | 0.630938 | 4_2:-13561465 | Msa0590150:CDS |
| GCCAAGGTTGAAGAGTGATA+GGG | 0.631315 | 4_2:-13563817 | Msa0590150:CDS |
| AAAGAAAGCAACATCCAAAG+TGG | 0.635054 | 4_2:+13563629 | None:intergenic |
| TGTAATCCTCTATGCAAGCA+TGG | 0.635068 | 4_2:-13564760 | Msa0590150:CDS |
| TAAACAAAGGAGACAACTCA+TGG | 0.635470 | 4_2:-13564830 | Msa0590150:CDS |
| TATGAAGAGAAGAATTAGTG+TGG | 0.639971 | 4_2:+13561355 | None:intergenic |
| GCATAGAGGATTACAAGACC+TGG | 0.642693 | 4_2:+13564768 | None:intergenic |
| TACAACTGTTCATACCCTTG+AGG | 0.646650 | 4_2:-13561334 | Msa0590150:CDS |
| TGGTCGTTCGACATCCTCAA+GGG | 0.648802 | 4_2:+13561320 | None:intergenic |
| TGAACAGCTCCAATCACTGA+AGG | 0.650438 | 4_2:+13563600 | None:intergenic |
| CTGCTAAGAGACCTGTGAGG+AGG | 0.651843 | 4_2:+13561510 | None:intergenic |
| GGTGCAGGATTGTTATGGAT+GGG | 0.652332 | 4_2:-13563756 | Msa0590150:CDS |
| TCACCACAATGGCTAAACAA+AGG | 0.669086 | 4_2:-13564843 | Msa0590150:CDS |
| GGTTGGTCAGGATTCAATGG+TGG | 0.669155 | 4_2:-13563735 | Msa0590150:CDS |
| ACTGGCGATGATGCTGTACA+CGG | 0.672487 | 4_2:-13561290 | Msa0590150:CDS |
| CGATGATGCTGTACACGGCG+AGG | 0.679210 | 4_2:-13561285 | Msa0590150:CDS |
| ACCTTCCTTCATCACCACAA+TGG | 0.681471 | 4_2:-13564854 | Msa0590150:CDS |
| AGTGTTTCACACACATGCTG+TGG | 0.682031 | 4_2:-13561549 | Msa0590150:CDS |
| GAAGAGTTGACTTCTTGTGG+AGG | 0.685329 | 4_2:+13562625 | None:intergenic |
| TTGCCGGTGACCAATTCAAG+GGG | 0.686365 | 4_2:-13561464 | Msa0590150:CDS |
| ATGTGTGTGAAACACTCCAA+GGG | 0.695193 | 4_2:+13561556 | None:intergenic |
| AGGACCATCATAGTCCACCA+TGG | 0.707593 | 4_2:+13562645 | None:intergenic |
| AGTATCACCCTATGTTACTG+GGG | 0.715721 | 4_2:-13561183 | Msa0590150:CDS |
| CATGTGTGTGAAACACTCCA+AGG | 0.722123 | 4_2:+13561555 | None:intergenic |
| TATCTGGGAGTATTCCATGG+TGG | 0.732232 | 4_2:-13562659 | Msa0590150:CDS |
| GTTCTGCTAAGAGACCTGTG+AGG | 0.819277 | 4_2:+13561507 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTTATATTTTAGAATT+TGG | - | chr4_2:13563745-13563764 | Msa0590150:CDS | 10.0% |
| !!! | TTGTTTTTCATTTTATTTTT+TGG | + | chr4_2:13563911-13563930 | None:intergenic | 10.0% |
| !!! | GTATTATATATTTTAGAATT+TGG | - | chr4_2:13563952-13563971 | Msa0590150:intron | 10.0% |
| !! | TCAAAAAAAAAAAAATTACA+AGG | + | chr4_2:13564107-13564126 | None:intergenic | 10.0% |
| !! | AATGATTAAATAATTACAAA+AGG | - | chr4_2:13564159-13564178 | Msa0590150:intron | 10.0% |
| !!! | AATTTTGTTTGTTTTTTTCT+AGG | - | chr4_2:13562195-13562214 | Msa0590150:intron | 15.0% |
| !!! | ACAACAATATTACTATTTTA+GGG | + | chr4_2:13562879-13562898 | None:intergenic | 15.0% |
| !!! | ACATTAATGTTACTATTTTA+GGG | + | chr4_2:13562923-13562942 | None:intergenic | 15.0% |
| !!! | ACTTCAAACATAATTTTTAA+GGG | + | chr4_2:13563081-13563100 | None:intergenic | 15.0% |
| !!! | AACTTCAAACATAATTTTTA+AGG | + | chr4_2:13563082-13563101 | None:intergenic | 15.0% |
| !! | AAAGATGTTATAGTATATAT+TGG | - | chr4_2:13563282-13563301 | Msa0590150:intron | 15.0% |
| !! | AGAATCAAATTATCTAATTA+AGG | + | chr4_2:13563503-13563522 | None:intergenic | 15.0% |
| !!! | AATATTATCAACCAATATTT+TGG | + | chr4_2:13563612-13563631 | None:intergenic | 15.0% |
| !! | TATAATTCAATTGATAGATA+CGG | - | chr4_2:13563814-13563833 | Msa0590150:CDS | 15.0% |
| !! | AAATTATTAAGGAAAAAAAG+TGG | + | chr4_2:13564043-13564062 | None:intergenic | 15.0% |
| !! | GCTCAAAAATAAAATTATTA+AGG | + | chr4_2:13564054-13564073 | None:intergenic | 15.0% |
| !! | TACAAAAGGATATTATTTAT+TGG | - | chr4_2:13564173-13564192 | Msa0590150:intron | 15.0% |
| !! | ACAAAAGGATATTATTTATT+GGG | - | chr4_2:13564174-13564193 | Msa0590150:intron | 15.0% |
| !!! | TATCTTTTTTATAAATGAAG+AGG | + | chr4_2:13564207-13564226 | None:intergenic | 15.0% |
| !! | TATATAGTTAATTCATATAC+TGG | + | chr4_2:13564442-13564461 | None:intergenic | 15.0% |
| !!! | AGTGAATATATCATAGTTTT+TGG | - | chr4_2:13561822-13561841 | Msa0590150:intron | 20.0% |
| !!! | ATTAAGTTGTTTATCAAAAC+CGG | - | chr4_2:13562141-13562160 | Msa0590150:intron | 20.0% |
| !!! | TAATTCTAGTTGAAGATTTT+CGG | + | chr4_2:13562168-13562187 | None:intergenic | 20.0% |
| !! | AAAAACAAACAAAATTGACT+AGG | + | chr4_2:13562191-13562210 | None:intergenic | 20.0% |
| !! | CATAATCAATAATTGATCAT+AGG | + | chr4_2:13562541-13562560 | None:intergenic | 20.0% |
| !! | TATTATTGTTGGTATTATGT+TGG | - | chr4_2:13562789-13562808 | Msa0590150:intron | 20.0% |
| !! | TTATTAGGTGAAATAATAAG+AGG | + | chr4_2:13562836-13562855 | None:intergenic | 20.0% |
| !! | GAATCAGATGTATATTTATT+AGG | + | chr4_2:13562851-13562870 | None:intergenic | 20.0% |
| !!! | CACAACAATATTACTATTTT+AGG | + | chr4_2:13562880-13562899 | None:intergenic | 20.0% |
| !!! | ATTAATGTTACTATTTTAGG+GGG | + | chr4_2:13562921-13562940 | None:intergenic | 20.0% |
| !!! | CATTAATGTTACTATTTTAG+GGG | + | chr4_2:13562922-13562941 | None:intergenic | 20.0% |
| !!! | CACATTAATGTTACTATTTT+AGG | + | chr4_2:13562924-13562943 | None:intergenic | 20.0% |
| !!! | AGTAGTATCATTTAAACTTT+TGG | - | chr4_2:13563030-13563049 | Msa0590150:intron | 20.0% |
| !! | ATCAAATTATCTAATTAAGG+TGG | + | chr4_2:13563500-13563519 | None:intergenic | 20.0% |
| !! | TAGATAATTTGATTCTTTAG+TGG | - | chr4_2:13563507-13563526 | Msa0590150:intron | 20.0% |
| !!! | TTGTGATATTTTGTTATTCT+TGG | - | chr4_2:13563650-13563669 | Msa0590150:CDS | 20.0% |
| !!! | TATTTTTTGGACAAATAGTT+TGG | + | chr4_2:13563898-13563917 | None:intergenic | 20.0% |
| !! | GTAAGATTTGATATTTGATA+TGG | + | chr4_2:13564011-13564030 | None:intergenic | 20.0% |
| !! | TTAACTATATACAATAACAC+AGG | - | chr4_2:13564451-13564470 | Msa0590150:CDS | 20.0% |
| !! | CTAATATGTTGGATACTTTT+AGG | - | chr4_2:13561361-13561380 | Msa0590150:CDS | 25.0% |
| !!! | TGATGAACTTTTTCCTTTTT+GGG | - | chr4_2:13561402-13561421 | Msa0590150:CDS | 25.0% |
| !! | AGAAATTTTTGACCTAATGA+AGG | + | chr4_2:13561439-13561458 | None:intergenic | 25.0% |
| !!! | ATTACTGTTATTTTGTTAGC+TGG | - | chr4_2:13561583-13561602 | Msa0590150:intron | 25.0% |
| ! | TATGTTATTCATCTTTCTTC+TGG | - | chr4_2:13561748-13561767 | Msa0590150:intron | 25.0% |
| ! | AGAAGTAGTTTACATACATA+AGG | - | chr4_2:13562085-13562104 | Msa0590150:intron | 25.0% |
| ! | ATTGTACGCTTATAACATAA+CGG | + | chr4_2:13562123-13562142 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCAAAACC+GGG | - | chr4_2:13562142-13562161 | Msa0590150:intron | 25.0% |
| !!! | TTGTTTGTTTTTTTCTAGGT+TGG | - | chr4_2:13562199-13562218 | Msa0590150:intron | 25.0% |
| !!! | TGTTTGTTTTTTTCTAGGTT+GGG | - | chr4_2:13562200-13562219 | Msa0590150:intron | 25.0% |
| ! | CAATAAAGATTGAATCTCAA+TGG | - | chr4_2:13562594-13562613 | Msa0590150:intron | 25.0% |
| ! | GTAATGAAGAGTTGTTATAT+TGG | - | chr4_2:13563146-13563165 | Msa0590150:intron | 25.0% |
| ! | ATTAGATTAGATGTACCAAA+TGG | - | chr4_2:13563181-13563200 | Msa0590150:intron | 25.0% |
| ! | GATAATGATGTTGAAAATGA+AGG | - | chr4_2:13563257-13563276 | Msa0590150:intron | 25.0% |
| ! | ATATATTGGCATTTACTAAG+AGG | - | chr4_2:13563296-13563315 | Msa0590150:intron | 25.0% |
| !!! | GGTTGATAATATTTAGTTGA+TGG | - | chr4_2:13563619-13563638 | Msa0590150:CDS | 25.0% |
| !!! | GGCTAAATTTCACTTTTAAA+GGG | + | chr4_2:13563874-13563893 | None:intergenic | 25.0% |
| !!! | TGGCTAAATTTCACTTTTAA+AGG | + | chr4_2:13563875-13563894 | None:intergenic | 25.0% |
| ! | TCATTACAATCAACATTACA+AGG | + | chr4_2:13564144-13564163 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATCTCTCTCAAA+CGG | - | chr4_2:13564295-13564314 | Msa0590150:CDS | 25.0% |
| ! | TAGTTAATTCATATACTGGT+AGG | + | chr4_2:13564438-13564457 | None:intergenic | 25.0% |
| AAGCATGGTCAAAAAGAAAT+GGG | - | chr4_2:13561294-13561313 | Msa0590150:CDS | 30.0% | |
| ATGCATCAGTACTAATATGT+TGG | - | chr4_2:13561350-13561369 | Msa0590150:CDS | 30.0% | |
| !! | GTGATGAACTTTTTCCTTTT+TGG | - | chr4_2:13561401-13561420 | Msa0590150:CDS | 30.0% |
| !! | GATGAACTTTTTCCTTTTTG+GGG | - | chr4_2:13561403-13561422 | Msa0590150:CDS | 30.0% |
| AAATAAACAAGTGAAGCCAT+AGG | + | chr4_2:13561544-13561563 | None:intergenic | 30.0% | |
| TTCTTGCAAGAATGAACATT+AGG | - | chr4_2:13561611-13561630 | Msa0590150:intron | 30.0% | |
| TCTTGCAAGAATGAACATTA+GGG | - | chr4_2:13561612-13561631 | Msa0590150:intron | 30.0% | |
| !!! | TGGTGGATTTTTGTATCATT+GGG | - | chr4_2:13561702-13561721 | Msa0590150:intron | 30.0% |
| !! | ATTCATCTTTCTTCTGGAAT+TGG | - | chr4_2:13561754-13561773 | Msa0590150:intron | 30.0% |
| AAGATTTCGACCTTAGTTTA+AGG | - | chr4_2:13561934-13561953 | Msa0590150:intron | 30.0% | |
| AGATTTCGACCTTAGTTTAA+GGG | - | chr4_2:13561935-13561954 | Msa0590150:intron | 30.0% | |
| ! | AATATGCAAGTTTTTCTGTC+AGG | + | chr4_2:13561988-13562007 | None:intergenic | 30.0% |
| ACATACATAAGGACTTGATA+AGG | - | chr4_2:13562096-13562115 | Msa0590150:intron | 30.0% | |
| TAAGCAATACATTGTTTGGT+GGG | + | chr4_2:13562255-13562274 | None:intergenic | 30.0% | |
| ATAAGCAATACATTGTTTGG+TGG | + | chr4_2:13562256-13562275 | None:intergenic | 30.0% | |
| AGCATAAGCAATACATTGTT+TGG | + | chr4_2:13562259-13562278 | None:intergenic | 30.0% | |
| !! | ATGGGAAGTGTTATTATTGT+TGG | - | chr4_2:13562778-13562797 | Msa0590150:intron | 30.0% |
| TATTGTTGGTATTATGTTGG+AGG | - | chr4_2:13562792-13562811 | Msa0590150:intron | 30.0% | |
| !! | ACTAAAGTTTTGACATGAAG+TGG | - | chr4_2:13562944-13562963 | Msa0590150:intron | 30.0% |
| TGATACTACTCACATGTAAT+TGG | + | chr4_2:13563020-13563039 | None:intergenic | 30.0% | |
| TCCTCTACTTAAGTAACTTT+AGG | - | chr4_2:13563211-13563230 | Msa0590150:intron | 30.0% | |
| ACCTAAAGTTACTTAAGTAG+AGG | + | chr4_2:13563215-13563234 | None:intergenic | 30.0% | |
| ! | GGTGGATTCTTAAAATAAAG+AGG | + | chr4_2:13563482-13563501 | None:intergenic | 30.0% |
| GGATCTATAGAATATTCCAA+CGG | - | chr4_2:13563528-13563547 | Msa0590150:intron | 30.0% | |
| ! | TAGAATATTCCAACGGTTTT+TGG | - | chr4_2:13563535-13563554 | Msa0590150:intron | 30.0% |
| ! | TTTTTGGACAAATAGTTTGG+TGG | + | chr4_2:13563895-13563914 | None:intergenic | 30.0% |
| ! | TGTCCATGCAATTTGTTTAT+AGG | - | chr4_2:13564375-13564394 | Msa0590150:CDS | 30.0% |
| TATGAAGAGAAGAATTAGTG+TGG | + | chr4_2:13564687-13564706 | None:intergenic | 30.0% | |
| !! | AATTTCATCTGCTTTTGATG+AGG | + | chr4_2:13564834-13564853 | None:intergenic | 30.0% |
| TAAACAAAGGAGACAACTCA+TGG | - | chr4_2:13561209-13561228 | Msa0590150:CDS | 35.0% | |
| CAAGCATGGTCAAAAAGAAA+TGG | - | chr4_2:13561293-13561312 | Msa0590150:CDS | 35.0% | |
| !!! | GATACTTTTAGGTTACCGTA+TGG | - | chr4_2:13561372-13561391 | Msa0590150:CDS | 35.0% |
| !!! | CTTTTTCCTTTTTGGGGTAA+AGG | - | chr4_2:13561409-13561428 | Msa0590150:CDS | 35.0% |
| TTGAAGAAATGAGTGCTTTC+AGG | + | chr4_2:13561481-13561500 | None:intergenic | 35.0% | |
| AGCACTCATTTCTTCAAGAA+TGG | - | chr4_2:13561484-13561503 | Msa0590150:CDS | 35.0% | |
| !!! | AACACAACCACTTTTTCCTA+TGG | - | chr4_2:13561525-13561544 | Msa0590150:CDS | 35.0% |
| TAAGAGAAAATGAGCCAAAG+AGG | + | chr4_2:13561655-13561674 | None:intergenic | 35.0% | |
| ! | CTCATTTTCTCTTACACTGT+TGG | - | chr4_2:13561661-13561680 | Msa0590150:intron | 35.0% |
| !! | TGTTGGTGCTTTTAGCATAT+GGG | - | chr4_2:13561678-13561697 | Msa0590150:intron | 35.0% |
| !!! | GTGGTGGATTTTTGTATCAT+TGG | - | chr4_2:13561701-13561720 | Msa0590150:intron | 35.0% |
| !! | GGTGGATTTTTGTATCATTG+GGG | - | chr4_2:13561703-13561722 | Msa0590150:intron | 35.0% |
| TGTTGTTGCAAGAACAATCA+TGG | - | chr4_2:13561879-13561898 | Msa0590150:intron | 35.0% | |
| TGTTGAGATACGAGAACTTA+TGG | - | chr4_2:13562008-13562027 | Msa0590150:intron | 35.0% | |
| AATGTATTGCTTATGCTAGC+AGG | - | chr4_2:13562262-13562281 | Msa0590150:intron | 35.0% | |
| AAAGAAAGCAACATCCAAAG+TGG | + | chr4_2:13562413-13562432 | None:intergenic | 35.0% | |
| !! | ACTTTGGATGTTGCTTTCTT+TGG | - | chr4_2:13562412-13562431 | Msa0590150:intron | 35.0% |
| TTGTGACTAAAGTCTTGACA+GGG | - | chr4_2:13562895-13562914 | Msa0590150:intron | 35.0% | |
| TTAGATGTACCAAATGGACA+AGG | - | chr4_2:13563187-13563206 | Msa0590150:intron | 35.0% | |
| TATTGGCATTTACTAAGAGG+TGG | - | chr4_2:13563299-13563318 | Msa0590150:intron | 35.0% | |
| ATTGGCATTTACTAAGAGGT+GGG | - | chr4_2:13563300-13563319 | Msa0590150:intron | 35.0% | |
| ! | ATAGTGATGGGAATACTATC+TGG | - | chr4_2:13563364-13563383 | Msa0590150:intron | 35.0% |
| ! | TAGTGATGGGAATACTATCT+GGG | - | chr4_2:13563365-13563384 | Msa0590150:intron | 35.0% |
| GAAGTCAACTCTTCTACAAA+AGG | - | chr4_2:13563423-13563442 | Msa0590150:intron | 35.0% | |
| TTCAAAGAACCAAAAACCGT+TGG | + | chr4_2:13563547-13563566 | None:intergenic | 35.0% | |
| ATGGACAAGAGGTAACAAAT+AGG | + | chr4_2:13564362-13564381 | None:intergenic | 35.0% | |
| AAACAAATTGCATGGACAAG+AGG | + | chr4_2:13564373-13564392 | None:intergenic | 35.0% | |
| CCTCCTATAAACAAATTGCA+TGG | + | chr4_2:13564381-13564400 | None:intergenic | 35.0% | |
| ! | CCATGCAATTTGTTTATAGG+AGG | - | chr4_2:13564378-13564397 | Msa0590150:CDS | 35.0% |
| AATATGAGTCTGCAAAGATC+TGG | + | chr4_2:13564557-13564576 | None:intergenic | 35.0% | |
| TCAGTTCTTGAAGCAATTAG+TGG | - | chr4_2:13564625-13564644 | Msa0590150:CDS | 35.0% | |
| AAGTATCACCCTATGTTACT+GGG | - | chr4_2:13564855-13564874 | Msa0590150:CDS | 35.0% | |
| ! | TTTAGCCATTGTGGTGATGA+AGG | + | chr4_2:13561193-13561212 | None:intergenic | 40.0% |
| TCACCACAATGGCTAAACAA+AGG | - | chr4_2:13561196-13561215 | Msa0590150:CDS | 40.0% | |
| ! | TCTCCTTTGTTTAGCCATTG+TGG | + | chr4_2:13561202-13561221 | None:intergenic | 40.0% |
| CATGCTTTGTAGACCAACTA+GGG | + | chr4_2:13561251-13561270 | None:intergenic | 40.0% | |
| TGTAATCCTCTATGCAAGCA+TGG | - | chr4_2:13561279-13561298 | Msa0590150:CDS | 40.0% | |
| ! | TTTTGACCATGCTTGCATAG+AGG | + | chr4_2:13561288-13561307 | None:intergenic | 40.0% |
| GGCTATGAATTCAGCTTTCA+TGG | - | chr4_2:13561315-13561334 | Msa0590150:CDS | 40.0% | |
| ! | TTAGGTTACCGTATGGCTTT+TGG | - | chr4_2:13561379-13561398 | Msa0590150:CDS | 40.0% |
| GTTCATCACCAAAAGCCATA+CGG | + | chr4_2:13561390-13561409 | None:intergenic | 40.0% | |
| AGTGAAGCCATAGGAAAAAG+TGG | + | chr4_2:13561535-13561554 | None:intergenic | 40.0% | |
| CAAGAATGAACATTAGGGCT+TGG | - | chr4_2:13561617-13561636 | Msa0590150:intron | 40.0% | |
| AATGAACATTAGGGCTTGGA+TGG | - | chr4_2:13561621-13561640 | Msa0590150:intron | 40.0% | |
| !! | CTGTTGGTGCTTTTAGCATA+TGG | - | chr4_2:13561677-13561696 | Msa0590150:intron | 40.0% |
| !! | GTTGGTGCTTTTAGCATATG+GGG | - | chr4_2:13561679-13561698 | Msa0590150:intron | 40.0% |
| !! | CATCTTTCTTCTGGAATTGG+TGG | - | chr4_2:13561757-13561776 | Msa0590150:intron | 40.0% |
| TGGATTCACTGCAGCTTATT+GGG | - | chr4_2:13561777-13561796 | Msa0590150:intron | 40.0% | |
| TCATCCAGACCCTTAAACTA+AGG | + | chr4_2:13561947-13561966 | None:intergenic | 40.0% | |
| !!! | TTTTTTTCTAGGTTGGGCCA+AGG | - | chr4_2:13562206-13562225 | Msa0590150:intron | 40.0% |
| ! | GAGTCAATGTTTGCTGCATA+TGG | + | chr4_2:13562334-13562353 | None:intergenic | 40.0% |
| TTTGGTAAGCCTTCAGTGAT+TGG | - | chr4_2:13562430-13562449 | Msa0590150:intron | 40.0% | |
| TTTATAGACAAACCTGCTCC+AGG | + | chr4_2:13562496-13562515 | None:intergenic | 40.0% | |
| ACGCGATAATGTATCGTAAG+TGG | + | chr4_2:13562638-13562657 | None:intergenic | 40.0% | |
| TGTTGGTATTATGTTGGAGG+TGG | - | chr4_2:13562795-13562814 | Msa0590150:intron | 40.0% | |
| GTTGTGACTAAAGTCTTGAC+AGG | - | chr4_2:13562894-13562913 | Msa0590150:intron | 40.0% | |
| TTGGCATTTACTAAGAGGTG+GGG | - | chr4_2:13563301-13563320 | Msa0590150:intron | 40.0% | |
| !! | TACTATCTGGGAGTATTCCA+TGG | - | chr4_2:13563377-13563396 | Msa0590150:intron | 40.0% |
| !! | TATTCCATGGTGGACTATGA+TGG | - | chr4_2:13563390-13563409 | Msa0590150:intron | 40.0% |
| ! | GTAGAAGAGTTGACTTCTTG+TGG | + | chr4_2:13563420-13563439 | None:intergenic | 40.0% |
| GCAGTCTCTCTCCAAAATAT+TGG | - | chr4_2:13563598-13563617 | Msa0590150:CDS | 40.0% | |
| GACAAGAGGTAACAAATAGG+AGG | + | chr4_2:13564359-13564378 | None:intergenic | 40.0% | |
| GGAAAACATGCATAGGATCA+AGG | + | chr4_2:13564417-13564436 | None:intergenic | 40.0% | |
| ACTGGTAGGAAAACATGCAT+AGG | + | chr4_2:13564424-13564443 | None:intergenic | 40.0% | |
| ATGTGTGTGAAACACTCCAA+GGG | + | chr4_2:13564486-13564505 | None:intergenic | 40.0% | |
| TCTTTGCAGACTCATATTGC+CGG | - | chr4_2:13564559-13564578 | Msa0590150:CDS | 40.0% | |
| GAAGAGAAGAATTAGTGTGG+TGG | + | chr4_2:13564684-13564703 | None:intergenic | 40.0% | |
| TACAACTGTTCATACCCTTG+AGG | - | chr4_2:13564705-13564724 | Msa0590150:CDS | 40.0% | |
| AAGTATGACCCAACTAAGCA+TGG | - | chr4_2:13564806-13564825 | Msa0590150:CDS | 40.0% | |
| ATGAGGATCCATGCTTAGTT+GGG | + | chr4_2:13564817-13564836 | None:intergenic | 40.0% | |
| ! | GAAGTATCACCCTATGTTAC+TGG | - | chr4_2:13564854-13564873 | Msa0590150:CDS | 40.0% |
| AGTATCACCCTATGTTACTG+GGG | - | chr4_2:13564856-13564875 | Msa0590150:CDS | 40.0% | |
| CTCTTGGTATGCTGTTGGAA+GGG | + | chr4_2:13561164-13561183 | None:intergenic | 45.0% | |
| ACCTTCCTTCATCACCACAA+TGG | - | chr4_2:13561185-13561204 | Msa0590150:CDS | 45.0% | |
| ATGACAGCATCAACCCTAGT+TGG | - | chr4_2:13561235-13561254 | Msa0590150:CDS | 45.0% | |
| GCATGCTTTGTAGACCAACT+AGG | + | chr4_2:13561252-13561271 | None:intergenic | 45.0% | |
| GCATAGAGGATTACAAGACC+TGG | + | chr4_2:13561274-13561293 | None:intergenic | 45.0% | |
| ! | GGTAAAGGTGCACCTTCATT+AGG | - | chr4_2:13561424-13561443 | Msa0590150:CDS | 45.0% |
| ! | GGATGGCTTTTGTACCTCTT+TGG | - | chr4_2:13561638-13561657 | Msa0590150:intron | 45.0% |
| !! | TGGGGTGTCATTGATTTCTC+TGG | - | chr4_2:13561721-13561740 | Msa0590150:intron | 45.0% |
| !! | GGTGTCATTGATTTCTCTGG+TGG | - | chr4_2:13561724-13561743 | Msa0590150:intron | 45.0% |
| GTGGATTCACTGCAGCTTAT+TGG | - | chr4_2:13561776-13561795 | Msa0590150:intron | 45.0% | |
| TCGACCTTAGTTTAAGGGTC+TGG | - | chr4_2:13561940-13561959 | Msa0590150:intron | 45.0% | |
| ! | CTAGTTGAAGATTTTCGGCC+CGG | + | chr4_2:13562163-13562182 | None:intergenic | 45.0% |
| GCCAAGGTTGAAGAGTGATA+GGG | - | chr4_2:13562222-13562241 | Msa0590150:intron | 45.0% | |
| TCCCTATCACTCTTCAACCT+TGG | + | chr4_2:13562226-13562245 | None:intergenic | 45.0% | |
| TAGCAGGTGCAGGATTGTTA+TGG | - | chr4_2:13562278-13562297 | Msa0590150:intron | 45.0% | |
| AGGTGCAGGATTGTTATGGA+TGG | - | chr4_2:13562282-13562301 | Msa0590150:intron | 45.0% | |
| GGTGCAGGATTGTTATGGAT+GGG | - | chr4_2:13562283-13562302 | Msa0590150:intron | 45.0% | |
| CAGGATTGTTATGGATGGGT+TGG | - | chr4_2:13562287-13562306 | Msa0590150:intron | 45.0% | |
| !! | TTGTTATGGATGGGTTGGTC+AGG | - | chr4_2:13562292-13562311 | Msa0590150:intron | 45.0% |
| !! | ATGGGTTGGTCAGGATTCAA+TGG | - | chr4_2:13562301-13562320 | Msa0590150:intron | 45.0% |
| TGAACAGCTCCAATCACTGA+AGG | + | chr4_2:13562442-13562461 | None:intergenic | 45.0% | |
| TTCAGTGATTGGAGCTGTTC+AGG | - | chr4_2:13562441-13562460 | Msa0590150:intron | 45.0% | |
| TCAGTGATTGGAGCTGTTCA+GGG | - | chr4_2:13562442-13562461 | Msa0590150:intron | 45.0% | |
| GTAGAGGATCCTTGTCCATT+TGG | + | chr4_2:13563199-13563218 | None:intergenic | 45.0% | |
| CATTTACTAAGAGGTGGGGT+TGG | - | chr4_2:13563305-13563324 | Msa0590150:intron | 45.0% | |
| TCATGGGCAGCTATAGTGAT+GGG | - | chr4_2:13563352-13563371 | Msa0590150:intron | 45.0% | |
| !! | TATCTGGGAGTATTCCATGG+TGG | - | chr4_2:13563380-13563399 | Msa0590150:intron | 45.0% |
| ! | GAAGAGTTGACTTCTTGTGG+AGG | + | chr4_2:13563417-13563436 | None:intergenic | 45.0% |
| TTTGGAGAGAGACTGCAACT+AGG | + | chr4_2:13563594-13563613 | None:intergenic | 45.0% | |
| ! | CTTGCTGTGTTGTGTGACTT+GGG | + | chr4_2:13563704-13563723 | None:intergenic | 45.0% |
| CAAGTCACACAACACAGCAA+GGG | - | chr4_2:13563703-13563722 | Msa0590150:CDS | 45.0% | |
| ATCTCTCTCAAACGGTGACA+CGG | - | chr4_2:13564303-13564322 | Msa0590150:CDS | 45.0% | |
| CATGTGTGTGAAACACTCCA+AGG | + | chr4_2:13564487-13564506 | None:intergenic | 45.0% | |
| AGTGTTTCACACACATGCTG+TGG | - | chr4_2:13564490-13564509 | Msa0590150:CDS | 45.0% | |
| TATTGCCGGTGACCAATTCA+AGG | - | chr4_2:13564573-13564592 | Msa0590150:CDS | 45.0% | |
| ATTGCCGGTGACCAATTCAA+GGG | - | chr4_2:13564574-13564593 | Msa0590150:CDS | 45.0% | |
| ATAGAAGGCTCCCCTTGAAT+TGG | + | chr4_2:13564588-13564607 | None:intergenic | 45.0% | |
| AATTCAAGGGGAGCCTTCTA+TGG | - | chr4_2:13564587-13564606 | Msa0590150:CDS | 45.0% | |
| ATTCAAGGGGAGCCTTCTAT+GGG | - | chr4_2:13564588-13564607 | Msa0590150:CDS | 45.0% | |
| ! | TGGCAGCACTTTTCATCACT+GGG | - | chr4_2:13564645-13564664 | Msa0590150:CDS | 45.0% |
| CGAGGAAGCTTATGCACTTT+GGG | - | chr4_2:13564772-13564791 | Msa0590150:CDS | 45.0% | |
| GAGGAAGCTTATGCACTTTG+GGG | - | chr4_2:13564773-13564792 | Msa0590150:CDS | 45.0% | |
| GATGAGGATCCATGCTTAGT+TGG | + | chr4_2:13564818-13564837 | None:intergenic | 45.0% | |
| !!! | TTTATTTATTTTTTTCAAAA+TGG | - | chr4_2:13562759-13562778 | Msa0590150:intron | 5.0% |
| !!! | TTATTTATTTTTTTCAAAAT+GGG | - | chr4_2:13562760-13562779 | Msa0590150:intron | 5.0% |
| GCTCTTGGTATGCTGTTGGA+AGG | + | chr4_2:13561165-13561184 | None:intergenic | 50.0% | |
| AGGTGCTCTTGGTATGCTGT+TGG | + | chr4_2:13561169-13561188 | None:intergenic | 50.0% | |
| !! | GTGATGAAGGAAGGTGCTCT+TGG | + | chr4_2:13561180-13561199 | None:intergenic | 50.0% |
| ! | GCCATTGTGGTGATGAAGGA+AGG | + | chr4_2:13561189-13561208 | None:intergenic | 50.0% |
| ! | GTTGGTCTACAAAGCATGCC+AGG | - | chr4_2:13561253-13561272 | Msa0590150:CDS | 50.0% |
| GGTGCACCTTTACCCCAAAA+AGG | + | chr4_2:13561418-13561437 | None:intergenic | 50.0% | |
| ! | GGTGCTTTTAGCATATGGGG+TGG | - | chr4_2:13561682-13561701 | Msa0590150:intron | 50.0% |
| ! | GCTTTTAGCATATGGGGTGG+TGG | - | chr4_2:13561685-13561704 | Msa0590150:intron | 50.0% |
| GGCCAAGGTTGAAGAGTGAT+AGG | - | chr4_2:13562221-13562240 | Msa0590150:intron | 50.0% | |
| TTGCTTATGCTAGCAGGTGC+AGG | - | chr4_2:13562268-13562287 | Msa0590150:intron | 50.0% | |
| ! | GGTTGGTCAGGATTCAATGG+TGG | - | chr4_2:13562304-13562323 | Msa0590150:intron | 50.0% |
| ! | CTGCAACTAGTCTCCTAGTG+TGG | - | chr4_2:13562386-13562405 | Msa0590150:intron | 50.0% |
| TCTCCTAGTGTGGACCACTT+TGG | - | chr4_2:13562396-13562415 | Msa0590150:intron | 50.0% | |
| CATCCAAAGTGGTCCACACT+AGG | + | chr4_2:13562402-13562421 | None:intergenic | 50.0% | |
| GCTGTTCAGGGTATGATGAC+AGG | - | chr4_2:13562454-13562473 | Msa0590150:intron | 50.0% | |
| ! | GGACTTGTTTGCATCACTCC+TGG | - | chr4_2:13562475-13562494 | Msa0590150:intron | 50.0% |
| GTCATGGGCAGCTATAGTGA+TGG | - | chr4_2:13563351-13563370 | Msa0590150:intron | 50.0% | |
| AGGACCATCATAGTCCACCA+TGG | + | chr4_2:13563397-13563416 | None:intergenic | 50.0% | |
| ! | CCTTGCTGTGTTGTGTGACT+TGG | + | chr4_2:13563705-13563724 | None:intergenic | 50.0% |
| CCAAGTCACACAACACAGCA+AGG | - | chr4_2:13563702-13563721 | Msa0590150:CDS | 50.0% | |
| ACACAGGTAGATGACACCCT+TGG | - | chr4_2:13564467-13564486 | Msa0590150:CDS | 50.0% | |
| TTTCACACACATGCTGTGGC+CGG | - | chr4_2:13564494-13564513 | Msa0590150:CDS | 50.0% | |
| GTTCTGCTAAGAGACCTGTG+AGG | + | chr4_2:13564535-13564554 | None:intergenic | 50.0% | |
| TTGCCGGTGACCAATTCAAG+GGG | - | chr4_2:13564575-13564594 | Msa0590150:CDS | 50.0% | |
| ! | GTGGCAGCACTTTTCATCAC+TGG | - | chr4_2:13564644-13564663 | Msa0590150:CDS | 50.0% |
| ! | CAGCACTTTTCATCACTGGG+TGG | - | chr4_2:13564648-13564667 | Msa0590150:CDS | 50.0% |
| TGGTCGTTCGACATCCTCAA+GGG | + | chr4_2:13564722-13564741 | None:intergenic | 50.0% | |
| ACTGGCGATGATGCTGTACA+CGG | - | chr4_2:13564749-13564768 | Msa0590150:CDS | 50.0% | |
| GCGAGGAAGCTTATGCACTT+TGG | - | chr4_2:13564771-13564790 | Msa0590150:CDS | 50.0% | |
| !! | GCTTATGCACTTTGGGGTGA+TGG | - | chr4_2:13564779-13564798 | Msa0590150:CDS | 50.0% |
| CCTCTTGCCCCAGTAACATA+GGG | + | chr4_2:13564866-13564885 | None:intergenic | 50.0% | |
| ACCTCTTGCCCCAGTAACAT+AGG | + | chr4_2:13564867-13564886 | None:intergenic | 50.0% | |
| GTTTGCATCACTCCTGGAGC+AGG | - | chr4_2:13562481-13562500 | Msa0590150:intron | 55.0% | |
| CTGTGAGGAGGCCTCCTAAA+AGG | + | chr4_2:13564520-13564539 | None:intergenic | 55.0% | |
| !! | CTTTTAGGAGGCCTCCTCAC+AGG | - | chr4_2:13564518-13564537 | Msa0590150:CDS | 55.0% |
| CTGCTAAGAGACCTGTGAGG+AGG | + | chr4_2:13564532-13564551 | None:intergenic | 55.0% | |
| GCTCCCCTTGAATTGGTCAC+CGG | + | chr4_2:13564581-13564600 | None:intergenic | 55.0% | |
| CTGGTCGTTCGACATCCTCA+AGG | + | chr4_2:13564723-13564742 | None:intergenic | 55.0% | |
| CCCTATGTTACTGGGGCAAG+AGG | - | chr4_2:13564863-13564882 | Msa0590150:CDS | 55.0% | |
| !! | GAGGTGGGGTTGGTTGCAAC+TGG | - | chr4_2:13563315-13563334 | Msa0590150:intron | 60.0% |
| !! | TGGGGTTGGTTGCAACTGGC+AGG | - | chr4_2:13563319-13563338 | Msa0590150:intron | 60.0% |
| !! | GGGGTTGGTTGCAACTGGCA+GGG | - | chr4_2:13563320-13563339 | Msa0590150:intron | 60.0% |
| TGGCAGGGCTTGTGCAGTCA+TGG | - | chr4_2:13563335-13563354 | Msa0590150:intron | 60.0% | |
| GGCAGGGCTTGTGCAGTCAT+GGG | - | chr4_2:13563336-13563355 | Msa0590150:intron | 60.0% | |
| ! | CATGCTGTGGCCGGCCTTTT+AGG | - | chr4_2:13564503-13564522 | Msa0590150:CDS | 60.0% |
| GAGGAGGCCTCCTAAAAGGC+CGG | + | chr4_2:13564516-13564535 | None:intergenic | 60.0% | |
| AGGGGAGCCTTCTATGGGCA+TGG | - | chr4_2:13564593-13564612 | Msa0590150:CDS | 60.0% | |
| GGAGCCTTCTATGGGCATGG+CGG | - | chr4_2:13564596-13564615 | Msa0590150:CDS | 60.0% | |
| TCGAACGACCAGCTCGAGAC+TGG | - | chr4_2:13564731-13564750 | Msa0590150:CDS | 60.0% | |
| CATCATCGCCAGTCTCGAGC+TGG | + | chr4_2:13564742-13564761 | None:intergenic | 60.0% | |
| CGATGATGCTGTACACGGCG+AGG | - | chr4_2:13564754-13564773 | Msa0590150:CDS | 60.0% | |
| ! | GCTGTGGCCGGCCTTTTAGG+AGG | - | chr4_2:13564506-13564525 | Msa0590150:CDS | 65.0% |
| GCCTTCTATGGGCATGGCGG+CGG | - | chr4_2:13564599-13564618 | Msa0590150:CDS | 65.0% | |
| GCCGCCGCCATGCCCATAGA+AGG | + | chr4_2:13564603-13564622 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 13561157 | 13564904 | 13561157 | ID=Msa0590150;Name=Msa0590150 |
| chr4_2 | mRNA | 13561157 | 13564904 | 13561157 | ID=Msa0590150-mRNA-1;Parent=Msa0590150;Name=Msa0590150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|487 |
| chr4_2 | exon | 13564263 | 13564904 | 13564263 | ID=Msa0590150-mRNA-1:exon:3932;Parent=Msa0590150-mRNA-1 |
| chr4_2 | exon | 13563559 | 13563844 | 13563559 | ID=Msa0590150-mRNA-1:exon:3931;Parent=Msa0590150-mRNA-1 |
| chr4_2 | exon | 13562617 | 13562720 | 13562617 | ID=Msa0590150-mRNA-1:exon:3930;Parent=Msa0590150-mRNA-1 |
| chr4_2 | exon | 13561157 | 13561588 | 13561157 | ID=Msa0590150-mRNA-1:exon:3929;Parent=Msa0590150-mRNA-1 |
| chr4_2 | CDS | 13564263 | 13564904 | 13564263 | ID=Msa0590150-mRNA-1:cds;Parent=Msa0590150-mRNA-1 |
| chr4_2 | CDS | 13563559 | 13563844 | 13563559 | ID=Msa0590150-mRNA-1:cds;Parent=Msa0590150-mRNA-1 |
| chr4_2 | CDS | 13562617 | 13562720 | 13562617 | ID=Msa0590150-mRNA-1:cds;Parent=Msa0590150-mRNA-1 |
| chr4_2 | CDS | 13561157 | 13561588 | 13561157 | ID=Msa0590150-mRNA-1:cds;Parent=Msa0590150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
