Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0638130 | XP_013443592.1 | 97.191 | 534 | 8 | 2 | 1 | 534 | 1 | 527 | 0.0 | 1033 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030380 | Msa0638130 | -0.818873 | 1.561583e-52 | -8.615850e-47 |
| Msa0107250 | Msa0638130 | -0.804979 | 1.665382e-49 | -8.615850e-47 |
| Msa0638130 | Msa0654760 | 0.810089 | 1.370781e-50 | -8.615850e-47 |
| Msa0638130 | Msa0655660 | 0.825045 | 5.805770e-54 | -8.615850e-47 |
| Msa0638130 | Msa0724830 | -0.803082 | 4.131618e-49 | -8.615850e-47 |
| Msa0638130 | Msa0802230 | 0.851290 | 9.774717e-61 | -8.615850e-47 |
| Msa0638130 | Msa0874500 | -0.804444 | 2.153594e-49 | -8.615850e-47 |
| Msa0638130 | Msa0903330 | -0.808812 | 2.576159e-50 | -8.615850e-47 |
| Msa0638130 | Msa0907700 | -0.801003 | 1.105382e-48 | -8.615850e-47 |
| Msa0638130 | Msa0932660 | 0.801253 | 9.826200e-49 | -8.615850e-47 |
| Msa0638130 | Msa0970570 | 0.842370 | 2.695785e-58 | -8.615850e-47 |
| Msa0638130 | Msa1295490 | 0.806881 | 6.631401e-50 | -8.615850e-47 |
| Msa0172350 | Msa0638130 | -0.814056 | 1.870715e-51 | -8.615850e-47 |
| Msa0173740 | Msa0638130 | -0.819226 | 1.297928e-52 | -8.615850e-47 |
| Msa0173820 | Msa0638130 | -0.824245 | 8.959390e-54 | -8.615850e-47 |
| Msa0173830 | Msa0638130 | -0.809097 | 2.238845e-50 | -8.615850e-47 |
| Msa0372660 | Msa0638130 | -0.804448 | 2.149750e-49 | -8.615850e-47 |
| Msa0372670 | Msa0638130 | -0.823009 | 1.744006e-53 | -8.615850e-47 |
| Msa0469910 | Msa0638130 | 0.801071 | 1.070247e-48 | -8.615850e-47 |
| Msa0242680 | Msa0638130 | -0.815176 | 1.057159e-51 | -8.615850e-47 |
| Msa0267760 | Msa0638130 | -0.811479 | 6.857284e-51 | -8.615850e-47 |
| Msa0526710 | Msa0638130 | -0.816029 | 6.827313e-52 | -8.615850e-47 |
| Msa0562300 | Msa0638130 | 0.810476 | 1.131271e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0638130 | MtrunA17_Chr4g0021121 | 97.191 | 534 | 8 | 2 | 1 | 534 | 1 | 527 | 0.0 | 1033 |
| Msa0638130 | MtrunA17_Chr2g0324351 | 54.662 | 547 | 188 | 12 | 1 | 534 | 1 | 500 | 7.10e-167 | 482 |
| Msa0638130 | MtrunA17_Chr6g0449531 | 31.546 | 317 | 166 | 14 | 12 | 307 | 59 | 345 | 2.47e-21 | 97.4 |
| Msa0638130 | MtrunA17_Chr2g0324371 | 42.553 | 141 | 28 | 5 | 21 | 159 | 13 | 102 | 1.89e-18 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0638130 | AT4G28300.1 | 50.628 | 557 | 189 | 15 | 1 | 532 | 1 | 496 | 5.93e-137 | 406 |
| Msa0638130 | AT4G28300.2 | 50.101 | 493 | 173 | 12 | 58 | 532 | 1 | 438 | 8.38e-113 | 342 |
| Msa0638130 | AT5G14540.1 | 33.813 | 139 | 88 | 1 | 61 | 199 | 111 | 245 | 2.68e-21 | 97.8 |
| Msa0638130 | AT3G01560.2 | 36.364 | 99 | 61 | 1 | 84 | 182 | 5 | 101 | 4.35e-17 | 83.6 |
| Msa0638130 | AT3G01560.1 | 36.364 | 99 | 61 | 1 | 84 | 182 | 134 | 230 | 1.37e-16 | 83.2 |
Find 201 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCAACCAGGCGACGTTTA+TGG | 0.173453 | 4_3:-32091287 | Msa0638130:CDS |
| GGAAGGATCGTTGTGATTAT+TGG | 0.195596 | 4_3:+32093961 | None:intergenic |
| CAGAAGGCATATACTGATTC+TGG | 0.232381 | 4_3:+32091714 | None:intergenic |
| CTCCATCCATCGATGGCTTC+TGG | 0.249185 | 4_3:-32094091 | Msa0638130:exon |
| TGATGGATTTGATGCTTGGC+TGG | 0.270937 | 4_3:+32091472 | None:intergenic |
| TTGCTGGGGTGGAGGCTGTT+GGG | 0.274705 | 4_3:+32091328 | None:intergenic |
| AATTGGTGAACATGGGATTC+AGG | 0.275724 | 4_3:-32091037 | Msa0638130:CDS |
| CCCATGCAAATGCCATATTC+AGG | 0.288983 | 4_3:-32091422 | Msa0638130:CDS |
| AGAATCTTCAGGTGGATTAT+AGG | 0.289605 | 4_3:+32093467 | None:intergenic |
| TTCACCCTGACCACCCTCTC+TGG | 0.289838 | 4_3:+32090910 | None:intergenic |
| ATCGTTGTGATTATTGGAAT+TGG | 0.293576 | 4_3:+32093967 | None:intergenic |
| CCGGGACATGTCTTGTAGTT+GGG | 0.318556 | 4_3:+32091673 | None:intergenic |
| GATTCCATGCAATATGGATA+TGG | 0.318852 | 4_3:-32091371 | Msa0638130:CDS |
| GTCCACTCTCCTCCATCCTT+TGG | 0.332598 | 4_3:+32090991 | None:intergenic |
| CGGAAATACCTTGGTTGAAA+TGG | 0.338095 | 4_3:+32093940 | None:intergenic |
| TACAATCTTGACAAATCTAT+TGG | 0.341539 | 4_3:-32093330 | Msa0638130:CDS |
| CACATTTGTTGGTGGAGCTT+GGG | 0.350179 | 4_3:+32091799 | None:intergenic |
| AAATGAGAGGGTTGGGGTGG+TGG | 0.351350 | 4_3:+32091176 | None:intergenic |
| ATTGGAATTGGAATCCCTAT+TGG | 0.355448 | 4_3:+32093985 | None:intergenic |
| ATCCCTATTGGAATCCCTAT+TGG | 0.357169 | 4_3:+32093997 | None:intergenic |
| GTGATTATTGGAATTGGAAT+TGG | 0.358572 | 4_3:+32093973 | None:intergenic |
| GGAATGAGCCCTTGATTTGC+TGG | 0.360232 | 4_3:+32091312 | None:intergenic |
| TTTCCAATAGGGATTCCAAT+AGG | 0.360406 | 4_3:-32094000 | Msa0638130:CDS |
| AAGAACAGAGTTGAAATCTA+TGG | 0.362354 | 4_3:+32090965 | None:intergenic |
| GGTTGCGGAACCCCTGAATA+TGG | 0.362733 | 4_3:+32091410 | None:intergenic |
| GTTGGTGGAGCTTGGGCCGG+CGG | 0.364895 | 4_3:+32091806 | None:intergenic |
| GGTCCTGCAGGCTGCGGCTG+AGG | 0.367921 | 4_3:+32091830 | None:intergenic |
| GGATTTCGAACCAGGAGATT+GGG | 0.368121 | 4_3:+32091110 | None:intergenic |
| CGTGCTGATTCCATGCAATA+TGG | 0.370661 | 4_3:-32091377 | Msa0638130:CDS |
| TCTTGGCTTAAAGAATCTTC+AGG | 0.370701 | 4_3:+32093456 | None:intergenic |
| TTGAGCAAAATGAGAGGGTT+GGG | 0.373583 | 4_3:+32091169 | None:intergenic |
| GAGATTTGAGCTTTGAGTCT+TGG | 0.374995 | 4_3:+32093271 | None:intergenic |
| TTTGCTGGGGTGGAGGCTGT+TGG | 0.378473 | 4_3:+32091327 | None:intergenic |
| CAGGAGGAGGAGGGAGTGCC+GGG | 0.383156 | 4_3:+32091249 | None:intergenic |
| CCCGGGACATGTCTTGTAGT+TGG | 0.386846 | 4_3:+32091672 | None:intergenic |
| TTGGTGGAGCTTGGGCCGGC+GGG | 0.386945 | 4_3:+32091807 | None:intergenic |
| TGCTGGGGTGGAGGCTGTTG+GGG | 0.389724 | 4_3:+32091329 | None:intergenic |
| TGGGTGATGGATTTGATGCT+TGG | 0.390414 | 4_3:+32091468 | None:intergenic |
| TTCCAATAGGGATTCCAATA+GGG | 0.392606 | 4_3:-32093999 | Msa0638130:CDS |
| CCCTTGATTTGCTGGGGTGG+AGG | 0.395889 | 4_3:+32091320 | None:intergenic |
| AGGATTTCGAACCAGGAGAT+TGG | 0.399658 | 4_3:+32091109 | None:intergenic |
| ATTTGCATGGGCATGCTGTT+TGG | 0.405176 | 4_3:+32091434 | None:intergenic |
| TCACATTTGTTGGTGGAGCT+TGG | 0.405990 | 4_3:+32091798 | None:intergenic |
| GGTGGAGCTTGGGCCGGCGG+GGG | 0.406373 | 4_3:+32091809 | None:intergenic |
| TCCATAAACGTCGCCTGGTT+GGG | 0.406727 | 4_3:+32091286 | None:intergenic |
| CAACAGTTGCAATCACATCT+TGG | 0.407701 | 4_3:+32093439 | None:intergenic |
| TTCTGAAGGGAAGCACTTGT+TGG | 0.411788 | 4_3:+32091134 | None:intergenic |
| GATGCTTGGCTGGGCTGGTA+TGG | 0.416424 | 4_3:+32091482 | None:intergenic |
| TGTCCTCATTGGACTGTGAA+TGG | 0.418272 | 4_3:+32091948 | None:intergenic |
| GTGGGTTGATTCACATTTGT+TGG | 0.418538 | 4_3:+32091788 | None:intergenic |
| CCAGGAGGAGGAGGGAGTGC+CGG | 0.419098 | 4_3:+32091248 | None:intergenic |
| GGCTAACTCTTTCTGAGTCT+CGG | 0.419152 | 4_3:+32092009 | None:intergenic |
| GCTCCTCAGCCGCAGCCTGC+AGG | 0.420464 | 4_3:-32091833 | Msa0638130:CDS |
| TATTCCTTGTGTAGGTTCAC+AGG | 0.421725 | 4_3:-32092066 | Msa0638130:intron |
| AGGTGAAGATTTGTCCTCAT+TGG | 0.426419 | 4_3:+32091937 | None:intergenic |
| TGGTGGAGCTTGGGCCGGCG+GGG | 0.426929 | 4_3:+32091808 | None:intergenic |
| GAGGAGGAGGGAGTGCCGGG+TGG | 0.428183 | 4_3:+32091252 | None:intergenic |
| AGCTGAGACACTGCAGGAGC+AGG | 0.429597 | 4_3:+32091740 | None:intergenic |
| GGCAGTGTTTCTGTGGGTGA+TGG | 0.429768 | 4_3:+32091455 | None:intergenic |
| ATCTCTTGAAAAGCACGTTC+AGG | 0.431044 | 4_3:-32093253 | Msa0638130:CDS |
| TCACCCTGACCACCCTCTCT+GGG | 0.435400 | 4_3:+32090911 | None:intergenic |
| ATGATGGTGGTGAGGGAGGA+AGG | 0.436550 | 4_3:-32091208 | Msa0638130:CDS |
| CCTTCAGAACCCCAATCTCC+TGG | 0.441034 | 4_3:-32091120 | Msa0638130:CDS |
| GATTTGATGCTTGGCTGGGC+TGG | 0.442786 | 4_3:+32091477 | None:intergenic |
| CCCAACTACAAGACATGTCC+CGG | 0.444452 | 4_3:-32091673 | Msa0638130:CDS |
| TTTGTTGGTGGAGCTTGGGC+CGG | 0.445102 | 4_3:+32091803 | None:intergenic |
| GCAGCAGCAATGGTCTCAGC+AGG | 0.448080 | 4_3:-32091561 | Msa0638130:CDS |
| TCGATGGCTTCTGGATCATC+TGG | 0.448384 | 4_3:-32094082 | Msa0638130:CDS |
| AGAGTTAGCCAAGCTTCAAC+TGG | 0.451183 | 4_3:-32091996 | Msa0638130:CDS |
| ATTCCATGCAATATGGATAT+GGG | 0.452854 | 4_3:-32091370 | Msa0638130:CDS |
| AGCAGGCGGCATGTAATAAG+AGG | 0.453577 | 4_3:+32091757 | None:intergenic |
| GAGGTTGCATTGAGGATTGT+TGG | 0.455603 | 4_3:+32091537 | None:intergenic |
| GATGGATTTGATGCTTGGCT+GGG | 0.455846 | 4_3:+32091473 | None:intergenic |
| GTCCATAAACGTCGCCTGGT+TGG | 0.456918 | 4_3:+32091285 | None:intergenic |
| CAATCAACTCATTGTAAGGA+TGG | 0.459561 | 4_3:+32091063 | None:intergenic |
| TTCTCGAGGGAATTAGTTCA+AGG | 0.459772 | 4_3:-32093377 | Msa0638130:CDS |
| AGTGCCGGGTGGGTCCCGCT+AGG | 0.464038 | 4_3:+32091263 | None:intergenic |
| ATTTCAACTCTGTTCTTGAC+AGG | 0.469232 | 4_3:-32090959 | Msa0638130:CDS |
| AGAAGGCATATACTGATTCT+GGG | 0.472657 | 4_3:+32091715 | None:intergenic |
| CCGGCACTCCCTCCTCCTCC+TGG | 0.473559 | 4_3:-32091248 | Msa0638130:CDS |
| GCCTCCACCCCAGCAAATCA+AGG | 0.474531 | 4_3:-32091321 | Msa0638130:CDS |
| GAATCAGCACGGCTGGATCC+TGG | 0.476142 | 4_3:+32091389 | None:intergenic |
| ACTGGCTAGGATTTCGAACC+AGG | 0.479136 | 4_3:+32091102 | None:intergenic |
| ATTGGTGAACATGGGATTCA+GGG | 0.489646 | 4_3:-32091036 | Msa0638130:CDS |
| GCACGGCTGGATCCTGGTTG+CGG | 0.489911 | 4_3:+32091395 | None:intergenic |
| CCAGGAGATTGGGGTTCTGA+AGG | 0.492059 | 4_3:+32091120 | None:intergenic |
| TTGCATGGAATCAGCACGGC+TGG | 0.493984 | 4_3:+32091382 | None:intergenic |
| ATTTGTGTAGAGTGTGTAAA+GGG | 0.496164 | 4_3:+32094138 | None:intergenic |
| CTGTTTGGCAGTGTTTCTGT+GGG | 0.497923 | 4_3:+32091449 | None:intergenic |
| TTGAATGTGCATGGCTCTGT+TGG | 0.502696 | 4_3:-32090936 | Msa0638130:CDS |
| GACCATTGCTGCTGCTGCTG+CGG | 0.503873 | 4_3:+32091569 | None:intergenic |
| CCATGCAAATGCCATATTCA+GGG | 0.504128 | 4_3:-32091421 | Msa0638130:CDS |
| TTTCTGAGCCAGTTGAAGCT+TGG | 0.506318 | 4_3:+32091988 | None:intergenic |
| CTAGGTCCATAAACGTCGCC+TGG | 0.509683 | 4_3:+32091281 | None:intergenic |
| GCTGTTTGGCAGTGTTTCTG+TGG | 0.510256 | 4_3:+32091448 | None:intergenic |
| GTGTAGGTTGTTGAGCCACC+CGG | 0.511542 | 4_3:+32091654 | None:intergenic |
| GGCTCATTCCCTTCCCAACC+AGG | 0.515897 | 4_3:-32091299 | Msa0638130:CDS |
| GCTTGGCTGGGCTGGTATGG+AGG | 0.516412 | 4_3:+32091485 | None:intergenic |
| TGAAGGGAAGCACTTGTTGG+AGG | 0.516431 | 4_3:+32091137 | None:intergenic |
| GGATTTATTTGAGATGGTGT+AGG | 0.517395 | 4_3:+32091638 | None:intergenic |
| TATGCATTACCAGGAGGAGG+AGG | 0.517422 | 4_3:+32091239 | None:intergenic |
| TCGGATGCAAAATCGAAGCC+GGG | 0.520913 | 4_3:+32094049 | None:intergenic |
| TAGTTCAAGGCTATCACAGT+TGG | 0.522673 | 4_3:-32093364 | Msa0638130:CDS |
| ATCGGATGCAAAATCGAAGC+CGG | 0.523414 | 4_3:+32094048 | None:intergenic |
| CCCTGAATATGGCATTTGCA+TGG | 0.524362 | 4_3:+32091421 | None:intergenic |
| GAGAATTGTTGCACAGGTGT+GGG | 0.526137 | 4_3:+32091614 | None:intergenic |
| AGGAGGAGGGAGTGCCGGGT+GGG | 0.529815 | 4_3:+32091253 | None:intergenic |
| CGGGACATGTCTTGTAGTTG+GGG | 0.534658 | 4_3:+32091674 | None:intergenic |
| TAATAAGAGGGTTGTTGAGT+GGG | 0.536570 | 4_3:+32091770 | None:intergenic |
| ATCCAGAAGCCATCGATGGA+TGG | 0.537128 | 4_3:+32094089 | None:intergenic |
| GGTTGATTCACATTTGTTGG+TGG | 0.539854 | 4_3:+32091791 | None:intergenic |
| TTCACAAATCAAGGGTAGCA+AGG | 0.540040 | 4_3:-32093512 | Msa0638130:CDS |
| CACCCTGACCACCCTCTCTG+GGG | 0.540928 | 4_3:+32090912 | None:intergenic |
| CAATCTTATGCGATTTCTCG+AGG | 0.545600 | 4_3:-32093391 | Msa0638130:CDS |
| AATTTGTGTAGAGTGTGTAA+AGG | 0.547278 | 4_3:+32094137 | None:intergenic |
| CTTATCGCTCCATCCATCGA+TGG | 0.547855 | 4_3:-32094098 | Msa0638130:exon |
| CTTGACAGGTTGAATGTGCA+TGG | 0.547992 | 4_3:-32090945 | Msa0638130:CDS |
| GTTCGATATTGTTGATCAGA+AGG | 0.548851 | 4_3:+32091698 | None:intergenic |
| ACCCTGACCACCCTCTCTGG+GGG | 0.549985 | 4_3:+32090913 | None:intergenic |
| ATTGAGCAAAATGAGAGGGT+TGG | 0.550179 | 4_3:+32091168 | None:intergenic |
| AACAGTAAATGACAATTCCA+CGG | 0.550242 | 4_3:+32090870 | None:intergenic |
| TAAACGTCGCCTGGTTGGGA+AGG | 0.551135 | 4_3:+32091290 | None:intergenic |
| TGGACCTAGCGGGACCCACC+CGG | 0.554292 | 4_3:-32091267 | Msa0638130:CDS |
| CATAAATGAGATGAGAGGAT+AGG | 0.555292 | 4_3:-32094233 | None:intergenic |
| TGAGCAAAATGAGAGGGTTG+GGG | 0.559278 | 4_3:+32091170 | None:intergenic |
| TCATCTGGTCGCGGTAACCC+CGG | 0.560886 | 4_3:-32094067 | Msa0638130:CDS |
| TATTCAGGGGTTCCGCAACC+AGG | 0.561692 | 4_3:-32091407 | Msa0638130:CDS |
| GAATGAGCCCTTGATTTGCT+GGG | 0.564737 | 4_3:+32091313 | None:intergenic |
| GAGCCCTTGATTTGCTGGGG+TGG | 0.568275 | 4_3:+32091317 | None:intergenic |
| AATGAGCCCTTGATTTGCTG+GGG | 0.569260 | 4_3:+32091314 | None:intergenic |
| GATTTCGAACCAGGAGATTG+GGG | 0.569357 | 4_3:+32091111 | None:intergenic |
| CCTGAATATGGCATTTGCAT+GGG | 0.570387 | 4_3:+32091422 | None:intergenic |
| GGTGGATTATAGGCAGCAGC+AGG | 0.572069 | 4_3:+32093477 | None:intergenic |
| CCTCCACCCCAGCAAATCAA+GGG | 0.574658 | 4_3:-32091320 | Msa0638130:CDS |
| CGTACAAACTGTGACTGGCT+AGG | 0.574969 | 4_3:+32091089 | None:intergenic |
| CTACAACTTAACTTTGTCCG+TGG | 0.575777 | 4_3:-32090887 | Msa0638130:three_prime_UTR |
| TGAGACACTGCAGGAGCAGG+CGG | 0.576500 | 4_3:+32091743 | None:intergenic |
| TTCCATGCAATATGGATATG+GGG | 0.578962 | 4_3:-32091369 | Msa0638130:CDS |
| GCAGAGCAAGAGCTAACTGC+TGG | 0.580757 | 4_3:+32091867 | None:intergenic |
| ATGATGTATGATGGTGGTGA+GGG | 0.582197 | 4_3:-32091215 | Msa0638130:CDS |
| AATACCTTGGTTGAAATGGA+AGG | 0.582478 | 4_3:+32093944 | None:intergenic |
| ATATATGCATTACCAGGAGG+AGG | 0.582553 | 4_3:+32091236 | None:intergenic |
| TGATGGTGGTGAGGGAGGAA+GGG | 0.584125 | 4_3:-32091207 | Msa0638130:CDS |
| AAACGTCGCCTGGTTGGGAA+GGG | 0.585185 | 4_3:+32091291 | None:intergenic |
| ATGTGGCGAGCGTGATCCAA+AGG | 0.586438 | 4_3:-32091007 | Msa0638130:CDS |
| GGTTGCGTACAAACTGTGAC+TGG | 0.589726 | 4_3:+32091084 | None:intergenic |
| AGAGAATTGTTGCACAGGTG+TGG | 0.590537 | 4_3:+32091613 | None:intergenic |
| TTTGGATCACGCTCGCCACA+TGG | 0.590732 | 4_3:+32091009 | None:intergenic |
| TCTCATTTGAGGTTGCATTG+AGG | 0.591596 | 4_3:+32091529 | None:intergenic |
| AGAATTGTTGCACAGGTGTG+GGG | 0.591849 | 4_3:+32091615 | None:intergenic |
| GAATTGTTGCACAGGTGTGG+GGG | 0.593555 | 4_3:+32091616 | None:intergenic |
| GGCGAGCGTGATCCAAAGGA+TGG | 0.594244 | 4_3:-32091003 | Msa0638130:CDS |
| GCTTCTGGATCATCTGGTCG+CGG | 0.595126 | 4_3:-32094076 | Msa0638130:CDS |
| AATGCATATATGATGTATGA+TGG | 0.595623 | 4_3:-32091224 | Msa0638130:CDS |
| ATGTATGATGGTGGTGAGGG+AGG | 0.596773 | 4_3:-32091212 | Msa0638130:CDS |
| CAGGAGATTGGGGTTCTGAA+GGG | 0.596968 | 4_3:+32091121 | None:intergenic |
| GTAATAAGAGGGTTGTTGAG+TGG | 0.597672 | 4_3:+32091769 | None:intergenic |
| ATCCAAAGGATGGAGGAGAG+TGG | 0.602183 | 4_3:-32090993 | Msa0638130:CDS |
| GATGATCCAGAAGCCATCGA+TGG | 0.602858 | 4_3:+32094085 | None:intergenic |
| AATTGTTGCACAGGTGTGGG+GGG | 0.604934 | 4_3:+32091617 | None:intergenic |
| GCAAAATGAGAGGGTTGGGG+TGG | 0.605890 | 4_3:+32091173 | None:intergenic |
| TGGCTTAAAGAATCTTCAGG+TGG | 0.605914 | 4_3:+32093459 | None:intergenic |
| TACATCATATATGCATTACC+AGG | 0.614005 | 4_3:+32091230 | None:intergenic |
| TCCATGCAATATGGATATGG+GGG | 0.614348 | 4_3:-32091368 | Msa0638130:CDS |
| GCTTTGAGTCTTGGTCACCA+TGG | 0.615141 | 4_3:+32093280 | None:intergenic |
| TATGATGTATGATGGTGGTG+AGG | 0.615379 | 4_3:-32091216 | Msa0638130:CDS |
| TACTGAGAGAATTGTTGCAC+AGG | 0.615965 | 4_3:+32091608 | None:intergenic |
| TGTAGGTTGTTGAGCCACCC+GGG | 0.617292 | 4_3:+32091655 | None:intergenic |
| GTAAGAGCACAAGATGTCAT+CGG | 0.617938 | 4_3:+32094030 | None:intergenic |
| AGATGAGAGGATAGGAGCGT+CGG | 0.619488 | 4_3:-32094225 | None:intergenic |
| ATTGGACTGTGAATGGCTTG+AGG | 0.626400 | 4_3:+32091955 | None:intergenic |
| AATCTTATGCGATTTCTCGA+GGG | 0.629595 | 4_3:-32093390 | Msa0638130:CDS |
| CCAGATTGAGCAAAATGAGA+GGG | 0.629994 | 4_3:+32091164 | None:intergenic |
| GAGCGTGATCCAAAGGATGG+AGG | 0.630922 | 4_3:-32091000 | Msa0638130:CDS |
| CATGCAAATGCCATATTCAG+GGG | 0.635117 | 4_3:-32091420 | Msa0638130:CDS |
| GGGACATGTCTTGTAGTTGG+GGG | 0.636371 | 4_3:+32091675 | None:intergenic |
| GGACATGTCTTGTAGTTGGG+GGG | 0.636938 | 4_3:+32091676 | None:intergenic |
| GCGACGTTTATGGACCTAGC+GGG | 0.637306 | 4_3:-32091277 | Msa0638130:CDS |
| CGATCCTTCCATTTCAACCA+AGG | 0.637502 | 4_3:-32093948 | Msa0638130:intron |
| ATGCATTACCAGGAGGAGGA+GGG | 0.642132 | 4_3:+32091240 | None:intergenic |
| TTGGTGAACATGGGATTCAG+GGG | 0.646830 | 4_3:-32091035 | Msa0638130:CDS |
| TCTGATTTAAATCGTGACCA+TGG | 0.650162 | 4_3:-32093297 | Msa0638130:CDS |
| GCAGGCGGCATGTAATAAGA+GGG | 0.652333 | 4_3:+32091758 | None:intergenic |
| GGGATTCAGGGGTGACCATG+TGG | 0.652748 | 4_3:-32091024 | Msa0638130:CDS |
| TCCAGATTGAGCAAAATGAG+AGG | 0.654697 | 4_3:+32091163 | None:intergenic |
| GGAGGATACACAGTAGACGA+GGG | 0.656427 | 4_3:+32091503 | None:intergenic |
| CCAACTACAAGACATGTCCC+GGG | 0.657770 | 4_3:-32091672 | Msa0638130:CDS |
| CATATTGCATGGAATCAGCA+CGG | 0.659701 | 4_3:+32091378 | None:intergenic |
| GAAGGCATATACTGATTCTG+GGG | 0.660685 | 4_3:+32091716 | None:intergenic |
| GGCTGAGGAGCAATTTGATG+AGG | 0.662328 | 4_3:+32091845 | None:intergenic |
| AGGATACACAGTAGACGAGG+GGG | 0.664692 | 4_3:+32091505 | None:intergenic |
| GCATATATGATGTATGATGG+TGG | 0.669589 | 4_3:-32091221 | Msa0638130:CDS |
| AAGCCATTCACAGTCCAATG+AGG | 0.674286 | 4_3:-32091951 | Msa0638130:CDS |
| TGGAGGATACACAGTAGACG+AGG | 0.679575 | 4_3:+32091502 | None:intergenic |
| CGGATGCAAAATCGAAGCCG+GGG | 0.679796 | 4_3:+32094050 | None:intergenic |
| GAGGATACACAGTAGACGAG+GGG | 0.681021 | 4_3:+32091504 | None:intergenic |
| AAGGCATATACTGATTCTGG+GGG | 0.685244 | 4_3:+32091717 | None:intergenic |
| ATCATATATGCATTACCAGG+AGG | 0.699211 | 4_3:+32091233 | None:intergenic |
| GGATACACAGTAGACGAGGG+GGG | 0.700494 | 4_3:+32091506 | None:intergenic |
| ACTACAAGACATGTCCCGGG+TGG | 0.736107 | 4_3:-32091669 | Msa0638130:CDS |
| GGCGACGTTTATGGACCTAG+CGG | 0.755640 | 4_3:-32091278 | Msa0638130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATAGTTTACCAATTTTT+AGG | - | chr4_3:32091077-32091096 | Msa0638130:CDS | 15.0% |
| !!! | GTTTCTTATTTTTGATTATT+AGG | - | chr4_3:32091366-32091385 | Msa0638130:CDS | 15.0% |
| !!! | AATATATTCTTTGTTTATCA+AGG | - | chr4_3:32092778-32092797 | Msa0638130:intron | 15.0% |
| !!! | TTTTTTGTTTTGTTGTTGTT+AGG | - | chr4_3:32091051-32091070 | Msa0638130:CDS | 20.0% |
| !!! | TTTTTGTTTTGTTGTTGTTA+GGG | - | chr4_3:32091052-32091071 | Msa0638130:CDS | 20.0% |
| !! | CTATAAACAAACATTGATAT+GGG | + | chr4_3:32091761-32091780 | None:intergenic | 20.0% |
| !!! | CTATAAATGATGATAATGAT+AGG | - | chr4_3:32091794-32091813 | Msa0638130:CDS | 20.0% |
| !!! | GTAGCTTTAATGTAAAATAA+AGG | - | chr4_3:32092467-32092486 | Msa0638130:intron | 20.0% |
| !! | AGAAAGGATTTAGATTTAAA+TGG | + | chr4_3:32092539-32092558 | None:intergenic | 20.0% |
| !! | AAGTAGTAAAATCATTAGAA+AGG | + | chr4_3:32092555-32092574 | None:intergenic | 20.0% |
| !! | TAGCATAATAATGAGATATA+TGG | + | chr4_3:32092593-32092612 | None:intergenic | 20.0% |
| !!! | TCATGATTTTATGTATGTTA+AGG | - | chr4_3:32092639-32092658 | Msa0638130:intron | 20.0% |
| !! | AAGAATATATTAAAAATCCG+TGG | + | chr4_3:32092769-32092788 | None:intergenic | 20.0% |
| !!! | CAAAGATTGATTTTTACATA+CGG | + | chr4_3:32094180-32094199 | None:intergenic | 20.0% |
| !! | ATGATGATGATCCTAAAAAT+TGG | + | chr4_3:32091091-32091110 | None:intergenic | 25.0% |
| !! | AACACAACATAATAATTTGC+AGG | - | chr4_3:32091415-32091434 | Msa0638130:CDS | 25.0% |
| ! | TACAATCTTGACAAATCTAT+TGG | - | chr4_3:32091623-32091642 | Msa0638130:CDS | 25.0% |
| ! | CATAAAAACAAATGAAGTTG+TGG | + | chr4_3:32091736-32091755 | None:intergenic | 25.0% |
| ! | CCTATAAACAAACATTGATA+TGG | + | chr4_3:32091762-32091781 | None:intergenic | 25.0% |
| ! | CCATATCAATGTTTGTTTAT+AGG | - | chr4_3:32091759-32091778 | Msa0638130:CDS | 25.0% |
| !!! | GGAAGTTTTTTGCAAATTTT+TGG | + | chr4_3:32091937-32091956 | None:intergenic | 25.0% |
| ! | TCGTATCTCTTATAGAAATA+AGG | + | chr4_3:32091958-32091977 | None:intergenic | 25.0% |
| ! | GCTAAAACACAATAAAATCA+AGG | - | chr4_3:32092065-32092084 | Msa0638130:intron | 25.0% |
| !!! | GATGTGTACGTTTTATTATA+TGG | - | chr4_3:32092101-32092120 | Msa0638130:intron | 25.0% |
| ! | TTACATTAAAGCTACTACTT+TGG | + | chr4_3:32092462-32092481 | None:intergenic | 25.0% |
| ! | TAAAGGATTATCTTTGATGA+AGG | - | chr4_3:32092484-32092503 | Msa0638130:intron | 25.0% |
| ! | AAAGGATTATCTTTGATGAA+GGG | - | chr4_3:32092485-32092504 | Msa0638130:intron | 25.0% |
| ! | CATAATAATGAGATATATGG+AGG | + | chr4_3:32092590-32092609 | None:intergenic | 25.0% |
| ! | ATGCTATCCTTCATTTAATA+TGG | - | chr4_3:32092607-32092626 | Msa0638130:intron | 25.0% |
| ! | TGCTATCCTTCATTTAATAT+GGG | - | chr4_3:32092608-32092627 | Msa0638130:intron | 25.0% |
| !!! | ACAAAGAATGATTTCTAGTT+GGG | + | chr4_3:32092717-32092736 | None:intergenic | 25.0% |
| !!! | AACAAAGAATGATTTCTAGT+TGG | + | chr4_3:32092718-32092737 | None:intergenic | 25.0% |
| ! | GTAAACTATGCATAATAACA+AGG | + | chr4_3:32092818-32092837 | None:intergenic | 25.0% |
| ! | TGTTATTATGCATAGTTTAC+TGG | - | chr4_3:32092818-32092837 | Msa0638130:intron | 25.0% |
| !!! | ATTTTTTCTATTCCTTGTGT+AGG | - | chr4_3:32092879-32092898 | Msa0638130:intron | 25.0% |
| ! | AATGCATATATGATGTATGA+TGG | - | chr4_3:32093729-32093748 | Msa0638130:intron | 25.0% |
| !! | TTTTCAATCAACTCATTGTA+AGG | + | chr4_3:32093897-32093916 | None:intergenic | 25.0% |
| !!! | CAATGAGTTGATTGAAAAAT+TGG | - | chr4_3:32093899-32093918 | Msa0638130:intron | 25.0% |
| ! | ATTGAAAAATTGGTGAACAT+GGG | - | chr4_3:32093909-32093928 | Msa0638130:intron | 25.0% |
| !!! | GGAATAAAAGTTTTATGTAG+TGG | - | chr4_3:32094141-32094160 | Msa0638130:five_prime_UTR | 25.0% |
| ATTTGTGTAGAGTGTGTAAA+GGG | + | chr4_3:32090818-32090837 | None:intergenic | 30.0% | |
| AATTTGTGTAGAGTGTGTAA+AGG | + | chr4_3:32090819-32090838 | None:intergenic | 30.0% | |
| ! | TTACGAAGACTTTTCCAATA+GGG | - | chr4_3:32090942-32090961 | Msa0638130:CDS | 30.0% |
| GTGATTATTGGAATTGGAAT+TGG | + | chr4_3:32090983-32091002 | None:intergenic | 30.0% | |
| ATCGTTGTGATTATTGGAAT+TGG | + | chr4_3:32090989-32091008 | None:intergenic | 30.0% | |
| AAAAAAAGTTATCGTTGACG+CGG | + | chr4_3:32091036-32091055 | None:intergenic | 30.0% | |
| TGGTAGAACAATTATTAGTC+AGG | - | chr4_3:32091241-32091260 | Msa0638130:CDS | 30.0% | |
| ! | ATGATGATAATGATAGGAGT+TGG | - | chr4_3:32091800-32091819 | Msa0638130:CDS | 30.0% |
| AAATGTAGGCAACACAAAAA+TGG | + | chr4_3:32091864-32091883 | None:intergenic | 30.0% | |
| !!! | TTTGCAAATTTTTGGTGCAT+TGG | + | chr4_3:32091929-32091948 | None:intergenic | 30.0% |
| AACACAATAAAATCAAGGAC+AGG | - | chr4_3:32092070-32092089 | Msa0638130:intron | 30.0% | |
| ACACAATAAAATCAAGGACA+GGG | - | chr4_3:32092071-32092090 | Msa0638130:intron | 30.0% | |
| GCTATCCTTCATTTAATATG+GGG | - | chr4_3:32092609-32092628 | Msa0638130:intron | 30.0% | |
| AAACACCCCATATTAAATGA+AGG | + | chr4_3:32092617-32092636 | None:intergenic | 30.0% | |
| !! | CAAAGAATGATTTCTAGTTG+GGG | + | chr4_3:32092716-32092735 | None:intergenic | 30.0% |
| ACTATGCATAATAACAAGGT+TGG | + | chr4_3:32092814-32092833 | None:intergenic | 30.0% | |
| AGGAATAGAAAAAATGAGGT+TGG | + | chr4_3:32092874-32092893 | None:intergenic | 30.0% | |
| CACAAGGAATAGAAAAAATG+AGG | + | chr4_3:32092878-32092897 | None:intergenic | 30.0% | |
| !!! | TTTTTAGGATCTGTTGTAGA+AGG | + | chr4_3:32093039-32093058 | None:intergenic | 30.0% |
| !!! | GATGCATTATCAGCTTTTTT+AGG | + | chr4_3:32093054-32093073 | None:intergenic | 30.0% |
| ATTCCATGCAATATGGATAT+GGG | - | chr4_3:32093583-32093602 | Msa0638130:intron | 30.0% | |
| TACATCATATATGCATTACC+AGG | + | chr4_3:32093726-32093745 | None:intergenic | 30.0% | |
| GATTGAAAAATTGGTGAACA+TGG | - | chr4_3:32093908-32093927 | Msa0638130:intron | 30.0% | |
| AAGAACAGAGTTGAAATCTA+TGG | + | chr4_3:32093991-32094010 | None:intergenic | 30.0% | |
| AACAGTAAATGACAATTCCA+CGG | + | chr4_3:32094086-32094105 | None:intergenic | 30.0% | |
| ! | CTTACGAAGACTTTTCCAAT+AGG | - | chr4_3:32090941-32090960 | Msa0638130:CDS | 35.0% |
| TTTCCAATAGGGATTCCAAT+AGG | - | chr4_3:32090953-32090972 | Msa0638130:CDS | 35.0% | |
| TTCCAATAGGGATTCCAATA+GGG | - | chr4_3:32090954-32090973 | Msa0638130:CDS | 35.0% | |
| ATTGGAATTGGAATCCCTAT+TGG | + | chr4_3:32090971-32090990 | None:intergenic | 35.0% | |
| AATACCTTGGTTGAAATGGA+AGG | + | chr4_3:32091012-32091031 | None:intergenic | 35.0% | |
| ATCATCATCATGATCGAGTT+GGG | - | chr4_3:32091100-32091119 | Msa0638130:CDS | 35.0% | |
| ! | TGCAGGATTTTCACAAATCA+AGG | - | chr4_3:32091432-32091451 | Msa0638130:CDS | 35.0% |
| ! | GCAGGATTTTCACAAATCAA+GGG | - | chr4_3:32091433-32091452 | Msa0638130:CDS | 35.0% |
| !! | AGAATCTTCAGGTGGATTAT+AGG | + | chr4_3:32091489-32091508 | None:intergenic | 35.0% |
| TCTTGGCTTAAAGAATCTTC+AGG | + | chr4_3:32091500-32091519 | None:intergenic | 35.0% | |
| AATCTTATGCGATTTCTCGA+GGG | - | chr4_3:32091563-32091582 | Msa0638130:CDS | 35.0% | |
| TCTGATTTAAATCGTGACCA+TGG | - | chr4_3:32091656-32091675 | Msa0638130:CDS | 35.0% | |
| GCAACACAAAAATGGTACTT+TGG | + | chr4_3:32091856-32091875 | None:intergenic | 35.0% | |
| GAGAGAGTGGAAATAAATGT+AGG | + | chr4_3:32091878-32091897 | None:intergenic | 35.0% | |
| CGAACATGAAACATCTAAAG+CGG | - | chr4_3:32091975-32091994 | Msa0638130:CDS | 35.0% | |
| CCACTTCAAATCTTCAATCA+AGG | + | chr4_3:32092128-32092147 | None:intergenic | 35.0% | |
| CCTTGATTGAAGATTTGAAG+TGG | - | chr4_3:32092125-32092144 | Msa0638130:intron | 35.0% | |
| ATACACAATCCATACTGACA+CGG | + | chr4_3:32092299-32092318 | None:intergenic | 35.0% | |
| ! | CAGTATGGATTGTGTATTGT+TGG | - | chr4_3:32092302-32092321 | Msa0638130:intron | 35.0% |
| TATCTTTGATGAAGGGATGA+TGG | - | chr4_3:32092492-32092511 | Msa0638130:intron | 35.0% | |
| ATCTTTGATGAAGGGATGAT+GGG | - | chr4_3:32092493-32092512 | Msa0638130:intron | 35.0% | |
| GGGTACTTTCAATTCTTTGA+TGG | + | chr4_3:32092665-32092684 | None:intergenic | 35.0% | |
| AAAAAAAAAGGCAGCATGCA+CGG | + | chr4_3:32092687-32092706 | None:intergenic | 35.0% | |
| ! | CGTGGATTAAGATAAGAGTT+GGG | + | chr4_3:32092751-32092770 | None:intergenic | 35.0% |
| CCAACTCTTATCTTAATCCA+CGG | - | chr4_3:32092749-32092768 | Msa0638130:intron | 35.0% | |
| TAATAAGAGGGTTGTTGAGT+GGG | + | chr4_3:32093186-32093205 | None:intergenic | 35.0% | |
| !! | AGAAGGCATATACTGATTCT+GGG | + | chr4_3:32093241-32093260 | None:intergenic | 35.0% |
| GTTCGATATTGTTGATCAGA+AGG | + | chr4_3:32093258-32093277 | None:intergenic | 35.0% | |
| ! | GGATTTATTTGAGATGGTGT+AGG | + | chr4_3:32093318-32093337 | None:intergenic | 35.0% |
| GATTCCATGCAATATGGATA+TGG | - | chr4_3:32093582-32093601 | Msa0638130:intron | 35.0% | |
| TTCCATGCAATATGGATATG+GGG | - | chr4_3:32093584-32093603 | Msa0638130:intron | 35.0% | |
| ATCATATATGCATTACCAGG+AGG | + | chr4_3:32093723-32093742 | None:intergenic | 35.0% | |
| GCATATATGATGTATGATGG+TGG | - | chr4_3:32093732-32093751 | Msa0638130:intron | 35.0% | |
| CAATCAACTCATTGTAAGGA+TGG | + | chr4_3:32093893-32093912 | None:intergenic | 35.0% | |
| ATTTCAACTCTGTTCTTGAC+AGG | - | chr4_3:32093994-32094013 | Msa0638130:CDS | 35.0% | |
| !! | ATCGCGTGTTTTATTATGCA+TGG | - | chr4_3:32094120-32094139 | Msa0638130:five_prime_UTR | 35.0% |
| ! | GTAAGAGCACAAGATGTCAT+CGG | + | chr4_3:32090926-32090945 | None:intergenic | 40.0% |
| ATCCCTATTGGAATCCCTAT+TGG | + | chr4_3:32090959-32090978 | None:intergenic | 40.0% | |
| GGAAGGATCGTTGTGATTAT+TGG | + | chr4_3:32090995-32091014 | None:intergenic | 40.0% | |
| CGGAAATACCTTGGTTGAAA+TGG | + | chr4_3:32091016-32091035 | None:intergenic | 40.0% | |
| GATCATCATCATGATCGAGT+TGG | - | chr4_3:32091099-32091118 | Msa0638130:CDS | 40.0% | |
| GTTCTACCAGAAATCGAACT+CGG | + | chr4_3:32091230-32091249 | None:intergenic | 40.0% | |
| TACTTAACTCAGTCGAACTC+CGG | - | chr4_3:32091267-32091286 | Msa0638130:CDS | 40.0% | |
| ATGTAACCATCCAGTTCCTA+GGG | + | chr4_3:32091300-32091319 | None:intergenic | 40.0% | |
| TATGTAACCATCCAGTTCCT+AGG | + | chr4_3:32091301-32091320 | None:intergenic | 40.0% | |
| TTCACAAATCAAGGGTAGCA+AGG | - | chr4_3:32091441-32091460 | Msa0638130:CDS | 40.0% | |
| TGGCTTAAAGAATCTTCAGG+TGG | + | chr4_3:32091497-32091516 | None:intergenic | 40.0% | |
| CAACAGTTGCAATCACATCT+TGG | + | chr4_3:32091517-32091536 | None:intergenic | 40.0% | |
| CAATCTTATGCGATTTCTCG+AGG | - | chr4_3:32091562-32091581 | Msa0638130:CDS | 40.0% | |
| TTCTCGAGGGAATTAGTTCA+AGG | - | chr4_3:32091576-32091595 | Msa0638130:CDS | 40.0% | |
| TAGTTCAAGGCTATCACAGT+TGG | - | chr4_3:32091589-32091608 | Msa0638130:CDS | 40.0% | |
| !! | GAGATTTGAGCTTTGAGTCT+TGG | + | chr4_3:32091685-32091704 | None:intergenic | 40.0% |
| ! | ATCTCTTGAAAAGCACGTTC+AGG | - | chr4_3:32091700-32091719 | Msa0638130:CDS | 40.0% |
| TCCACTCTCTCTTTCTCAAA+TGG | - | chr4_3:32091887-32091906 | Msa0638130:CDS | 40.0% | |
| TCCATTTGAGAAAGAGAGAG+TGG | + | chr4_3:32091891-32091910 | None:intergenic | 40.0% | |
| ! | AGGACTAGTGCATGATACAA+AGG | - | chr4_3:32092199-32092218 | Msa0638130:intron | 40.0% |
| ! | AAAGGCTTCCCTACCTTTTT+CGG | - | chr4_3:32092217-32092236 | Msa0638130:intron | 40.0% |
| ! | TGGATTGTGTATTGTTGGCT+TGG | - | chr4_3:32092307-32092326 | Msa0638130:intron | 40.0% |
| AAAAAAAAGGCAGCATGCAC+GGG | + | chr4_3:32092686-32092705 | None:intergenic | 40.0% | |
| TTGGGGAGGGACAAAAAAAA+AGG | + | chr4_3:32092699-32092718 | None:intergenic | 40.0% | |
| !! | GAATGATTTCTAGTTGGGGA+GGG | + | chr4_3:32092712-32092731 | None:intergenic | 40.0% |
| !! | AGAATGATTTCTAGTTGGGG+AGG | + | chr4_3:32092713-32092732 | None:intergenic | 40.0% |
| ! | CCGTGGATTAAGATAAGAGT+TGG | + | chr4_3:32092752-32092771 | None:intergenic | 40.0% |
| ATGAGGTTGGAACAAAAGCA+AGG | + | chr4_3:32092861-32092880 | None:intergenic | 40.0% | |
| TATTCCTTGTGTAGGTTCAC+AGG | - | chr4_3:32092887-32092906 | Msa0638130:intron | 40.0% | |
| AGGTGAAGATTTGTCCTCAT+TGG | + | chr4_3:32093019-32093038 | None:intergenic | 40.0% | |
| ! | GGTTGATTCACATTTGTTGG+TGG | + | chr4_3:32093165-32093184 | None:intergenic | 40.0% |
| !! | GTGGGTTGATTCACATTTGT+TGG | + | chr4_3:32093168-32093187 | None:intergenic | 40.0% |
| GTAATAAGAGGGTTGTTGAG+TGG | + | chr4_3:32093187-32093206 | None:intergenic | 40.0% | |
| !! | AAGGCATATACTGATTCTGG+GGG | + | chr4_3:32093239-32093258 | None:intergenic | 40.0% |
| !! | GAAGGCATATACTGATTCTG+GGG | + | chr4_3:32093240-32093259 | None:intergenic | 40.0% |
| !! | CAGAAGGCATATACTGATTC+TGG | + | chr4_3:32093242-32093261 | None:intergenic | 40.0% |
| TACTGAGAGAATTGTTGCAC+AGG | + | chr4_3:32093348-32093367 | None:intergenic | 40.0% | |
| ! | TCTCATTTGAGGTTGCATTG+AGG | + | chr4_3:32093427-32093446 | None:intergenic | 40.0% |
| CCTGAATATGGCATTTGCAT+GGG | + | chr4_3:32093534-32093553 | None:intergenic | 40.0% | |
| CCATGCAAATGCCATATTCA+GGG | - | chr4_3:32093532-32093551 | Msa0638130:intron | 40.0% | |
| CATGCAAATGCCATATTCAG+GGG | - | chr4_3:32093533-32093552 | Msa0638130:intron | 40.0% | |
| CATATTGCATGGAATCAGCA+CGG | + | chr4_3:32093578-32093597 | None:intergenic | 40.0% | |
| TCCATGCAATATGGATATGG+GGG | - | chr4_3:32093585-32093604 | Msa0638130:intron | 40.0% | |
| ATATATGCATTACCAGGAGG+AGG | + | chr4_3:32093720-32093739 | None:intergenic | 40.0% | |
| !! | TATGATGTATGATGGTGGTG+AGG | - | chr4_3:32093737-32093756 | Msa0638130:intron | 40.0% |
| !! | ATGATGTATGATGGTGGTGA+GGG | - | chr4_3:32093738-32093757 | Msa0638130:intron | 40.0% |
| TTGAGCAAAATGAGAGGGTT+GGG | + | chr4_3:32093787-32093806 | None:intergenic | 40.0% | |
| ATTGAGCAAAATGAGAGGGT+TGG | + | chr4_3:32093788-32093807 | None:intergenic | 40.0% | |
| CCAGATTGAGCAAAATGAGA+GGG | + | chr4_3:32093792-32093811 | None:intergenic | 40.0% | |
| TCCAGATTGAGCAAAATGAG+AGG | + | chr4_3:32093793-32093812 | None:intergenic | 40.0% | |
| AATTGGTGAACATGGGATTC+AGG | - | chr4_3:32093916-32093935 | Msa0638130:intron | 40.0% | |
| ATTGGTGAACATGGGATTCA+GGG | - | chr4_3:32093917-32093936 | Msa0638130:intron | 40.0% | |
| CTACAACTTAACTTTGTCCG+TGG | - | chr4_3:32094066-32094085 | Msa0638130:CDS | 40.0% | |
| ATCGGATGCAAAATCGAAGC+CGG | + | chr4_3:32090908-32090927 | None:intergenic | 45.0% | |
| CGATCCTTCCATTTCAACCA+AGG | - | chr4_3:32091005-32091024 | Msa0638130:CDS | 45.0% | |
| !! | ATCATCATGATCGAGTTGGG+AGG | - | chr4_3:32091103-32091122 | Msa0638130:CDS | 45.0% |
| !! | TCATCATGATCGAGTTGGGA+GGG | - | chr4_3:32091104-32091123 | Msa0638130:CDS | 45.0% |
| GTGTATCCGAGTTCGATTTC+TGG | - | chr4_3:32091221-32091240 | Msa0638130:CDS | 45.0% | |
| TTGGTGCATTGGAGACATCA+AGG | + | chr4_3:32091918-32091937 | None:intergenic | 45.0% | |
| AGTCCTGGTCCTTAATTGCA+TGG | + | chr4_3:32092179-32092198 | None:intergenic | 45.0% | |
| TGCAATTAAGGACCAGGACT+AGG | - | chr4_3:32092179-32092198 | Msa0638130:intron | 45.0% | |
| !!! | TTCCCTACCTTTTTCGGTCA+GGG | - | chr4_3:32092223-32092242 | Msa0638130:intron | 45.0% |
| ATAGCTAAGCCGTGTCAGTA+TGG | - | chr4_3:32092287-32092306 | Msa0638130:intron | 45.0% | |
| !! | GTGTATTGTTGGCTTGGACT+TGG | - | chr4_3:32092313-32092332 | Msa0638130:intron | 45.0% |
| GGTGATGTTGTCTGCATTCA+AGG | + | chr4_3:32092441-32092460 | None:intergenic | 45.0% | |
| ATGGCCTCACTGAAATTAGC+AGG | + | chr4_3:32092520-32092539 | None:intergenic | 45.0% | |
| AAAAAAAGGCAGCATGCACG+GGG | + | chr4_3:32092685-32092704 | None:intergenic | 45.0% | |
| GGCTAACTCTTTCTGAGTCT+CGG | + | chr4_3:32092947-32092966 | None:intergenic | 45.0% | |
| AGAGTTAGCCAAGCTTCAAC+TGG | - | chr4_3:32092957-32092976 | Msa0638130:intron | 45.0% | |
| TTTCTGAGCCAGTTGAAGCT+TGG | + | chr4_3:32092968-32092987 | None:intergenic | 45.0% | |
| ATTGGACTGTGAATGGCTTG+AGG | + | chr4_3:32093001-32093020 | None:intergenic | 45.0% | |
| AAGCCATTCACAGTCCAATG+AGG | - | chr4_3:32093002-32093021 | Msa0638130:intron | 45.0% | |
| TGTCCTCATTGGACTGTGAA+TGG | + | chr4_3:32093008-32093027 | None:intergenic | 45.0% | |
| ! | CACATTTGTTGGTGGAGCTT+GGG | + | chr4_3:32093157-32093176 | None:intergenic | 45.0% |
| ! | TCACATTTGTTGGTGGAGCT+TGG | + | chr4_3:32093158-32093177 | None:intergenic | 45.0% |
| GTGGGGGGATTTATTTGAGA+TGG | + | chr4_3:32093324-32093343 | None:intergenic | 45.0% | |
| AGAATTGTTGCACAGGTGTG+GGG | + | chr4_3:32093341-32093360 | None:intergenic | 45.0% | |
| GAGAATTGTTGCACAGGTGT+GGG | + | chr4_3:32093342-32093361 | None:intergenic | 45.0% | |
| AGAGAATTGTTGCACAGGTG+TGG | + | chr4_3:32093343-32093362 | None:intergenic | 45.0% | |
| GAGGTTGCATTGAGGATTGT+TGG | + | chr4_3:32093419-32093438 | None:intergenic | 45.0% | |
| ! | GATGGATTTGATGCTTGGCT+GGG | + | chr4_3:32093483-32093502 | None:intergenic | 45.0% |
| !! | TGATGGATTTGATGCTTGGC+TGG | + | chr4_3:32093484-32093503 | None:intergenic | 45.0% |
| !! | TGGGTGATGGATTTGATGCT+TGG | + | chr4_3:32093488-32093507 | None:intergenic | 45.0% |
| ! | CTGTTTGGCAGTGTTTCTGT+GGG | + | chr4_3:32093507-32093526 | None:intergenic | 45.0% |
| ATTTGCATGGGCATGCTGTT+TGG | + | chr4_3:32093522-32093541 | None:intergenic | 45.0% | |
| CCCATGCAAATGCCATATTC+AGG | - | chr4_3:32093531-32093550 | Msa0638130:intron | 45.0% | |
| CCCTGAATATGGCATTTGCA+TGG | + | chr4_3:32093535-32093554 | None:intergenic | 45.0% | |
| !! | CGTGCTGATTCCATGCAATA+TGG | - | chr4_3:32093576-32093595 | Msa0638130:intron | 45.0% |
| TCCCCCATATCCATATTGCA+TGG | + | chr4_3:32093589-32093608 | None:intergenic | 45.0% | |
| CAATATGGATATGGGGGAAC+TGG | - | chr4_3:32093591-32093610 | Msa0638130:intron | 45.0% | |
| !! | AATGAGCCCTTGATTTGCTG+GGG | + | chr4_3:32093642-32093661 | None:intergenic | 45.0% |
| !! | GAATGAGCCCTTGATTTGCT+GGG | + | chr4_3:32093643-32093662 | None:intergenic | 45.0% |
| TGAGCAAAATGAGAGGGTTG+GGG | + | chr4_3:32093786-32093805 | None:intergenic | 45.0% | |
| ! | CCCTCTCATTTTGCTCAATC+TGG | - | chr4_3:32093789-32093808 | Msa0638130:intron | 45.0% |
| !! | TTCTGAAGGGAAGCACTTGT+TGG | + | chr4_3:32093822-32093841 | None:intergenic | 45.0% |
| GATTTCGAACCAGGAGATTG+GGG | + | chr4_3:32093845-32093864 | None:intergenic | 45.0% | |
| GGATTTCGAACCAGGAGATT+GGG | + | chr4_3:32093846-32093865 | None:intergenic | 45.0% | |
| AGGATTTCGAACCAGGAGAT+TGG | + | chr4_3:32093847-32093866 | None:intergenic | 45.0% | |
| TTGGTGAACATGGGATTCAG+GGG | - | chr4_3:32093918-32093937 | Msa0638130:intron | 45.0% | |
| ! | CTTGACAGGTTGAATGTGCA+TGG | - | chr4_3:32094008-32094027 | Msa0638130:CDS | 45.0% |
| ! | TTGAATGTGCATGGCTCTGT+TGG | - | chr4_3:32094017-32094036 | Msa0638130:CDS | 45.0% |
| CTTATCGCTCCATCCATCGA+TGG | - | chr4_3:32090855-32090874 | Msa0638130:three_prime_UTR | 50.0% | |
| ATCCAGAAGCCATCGATGGA+TGG | + | chr4_3:32090867-32090886 | None:intergenic | 50.0% | |
| GATGATCCAGAAGCCATCGA+TGG | + | chr4_3:32090871-32090890 | None:intergenic | 50.0% | |
| TCGATGGCTTCTGGATCATC+TGG | - | chr4_3:32090871-32090890 | Msa0638130:three_prime_UTR | 50.0% | |
| TCGGATGCAAAATCGAAGCC+GGG | + | chr4_3:32090907-32090926 | None:intergenic | 50.0% | |
| TCGTTGACGCGGAAATACCT+TGG | + | chr4_3:32091025-32091044 | None:intergenic | 50.0% | |
| !! | CATCATGATCGAGTTGGGAG+GGG | - | chr4_3:32091105-32091124 | Msa0638130:CDS | 50.0% |
| TGAGCTTCGACGCATAGTTC+AGG | - | chr4_3:32091199-32091218 | Msa0638130:CDS | 50.0% | |
| ! | GCTTTGAGTCTTGGTCACCA+TGG | + | chr4_3:32091676-32091695 | None:intergenic | 50.0% |
| TTGATCCTCTCATGTCTGCC+AGG | - | chr4_3:32092152-32092171 | Msa0638130:intron | 50.0% | |
| TGATCCTCTCATGTCTGCCA+GGG | - | chr4_3:32092153-32092172 | Msa0638130:intron | 50.0% | |
| TCATGCACTAGTCCTAGTCC+TGG | + | chr4_3:32092194-32092213 | None:intergenic | 50.0% | |
| !!! | CTTCCCTACCTTTTTCGGTC+AGG | - | chr4_3:32092222-32092241 | Msa0638130:intron | 50.0% |
| !!! | TCCCTACCTTTTTCGGTCAG+GGG | - | chr4_3:32092224-32092243 | Msa0638130:intron | 50.0% |
| ACCCCTGACCGAAAAAGGTA+GGG | + | chr4_3:32092228-32092247 | None:intergenic | 50.0% | |
| TACCCCTGACCGAAAAAGGT+AGG | + | chr4_3:32092229-32092248 | None:intergenic | 50.0% | |
| GCTATACCCCTGACCGAAAA+AGG | + | chr4_3:32092233-32092252 | None:intergenic | 50.0% | |
| ! | GTCAGGGGTATAGCAGCAAA+AGG | - | chr4_3:32092239-32092258 | Msa0638130:intron | 50.0% |
| CAGCAAAAGGCTGTGATACG+AGG | - | chr4_3:32092252-32092271 | Msa0638130:intron | 50.0% | |
| GGGACCTGCTAATTTCAGTG+AGG | - | chr4_3:32092513-32092532 | Msa0638130:intron | 50.0% | |
| CTGACCTGTGAACCTACACA+AGG | + | chr4_3:32092894-32092913 | None:intergenic | 50.0% | |
| GGCTGAGGAGCAATTTGATG+AGG | + | chr4_3:32093111-32093130 | None:intergenic | 50.0% | |
| GCAGGCGGCATGTAATAAGA+GGG | + | chr4_3:32093198-32093217 | None:intergenic | 50.0% | |
| AGCAGGCGGCATGTAATAAG+AGG | + | chr4_3:32093199-32093218 | None:intergenic | 50.0% | |
| GGACATGTCTTGTAGTTGGG+GGG | + | chr4_3:32093280-32093299 | None:intergenic | 50.0% | |
| GGGACATGTCTTGTAGTTGG+GGG | + | chr4_3:32093281-32093300 | None:intergenic | 50.0% | |
| CGGGACATGTCTTGTAGTTG+GGG | + | chr4_3:32093282-32093301 | None:intergenic | 50.0% | |
| CCGGGACATGTCTTGTAGTT+GGG | + | chr4_3:32093283-32093302 | None:intergenic | 50.0% | |
| CCCAACTACAAGACATGTCC+CGG | - | chr4_3:32093280-32093299 | Msa0638130:CDS | 50.0% | |
| CCAACTACAAGACATGTCCC+GGG | - | chr4_3:32093281-32093300 | Msa0638130:CDS | 50.0% | |
| AATTGTTGCACAGGTGTGGG+GGG | + | chr4_3:32093339-32093358 | None:intergenic | 50.0% | |
| GAATTGTTGCACAGGTGTGG+GGG | + | chr4_3:32093340-32093359 | None:intergenic | 50.0% | |
| AGGATACACAGTAGACGAGG+GGG | + | chr4_3:32093451-32093470 | None:intergenic | 50.0% | |
| GAGGATACACAGTAGACGAG+GGG | + | chr4_3:32093452-32093471 | None:intergenic | 50.0% | |
| GGAGGATACACAGTAGACGA+GGG | + | chr4_3:32093453-32093472 | None:intergenic | 50.0% | |
| TGGAGGATACACAGTAGACG+AGG | + | chr4_3:32093454-32093473 | None:intergenic | 50.0% | |
| ! | GCTGTTTGGCAGTGTTTCTG+TGG | + | chr4_3:32093508-32093527 | None:intergenic | 50.0% |
| !! | GGAATGAGCCCTTGATTTGC+TGG | + | chr4_3:32093644-32093663 | None:intergenic | 50.0% |
| TCCATAAACGTCGCCTGGTT+GGG | + | chr4_3:32093670-32093689 | None:intergenic | 50.0% | |
| ATGCATTACCAGGAGGAGGA+GGG | + | chr4_3:32093716-32093735 | None:intergenic | 50.0% | |
| TATGCATTACCAGGAGGAGG+AGG | + | chr4_3:32093717-32093736 | None:intergenic | 50.0% | |
| !! | ATGTATGATGGTGGTGAGGG+AGG | - | chr4_3:32093741-32093760 | Msa0638130:intron | 50.0% |
| !! | TGAAGGGAAGCACTTGTTGG+AGG | + | chr4_3:32093819-32093838 | None:intergenic | 50.0% |
| !! | CAGGAGATTGGGGTTCTGAA+GGG | + | chr4_3:32093835-32093854 | None:intergenic | 50.0% |
| ACTGGCTAGGATTTCGAACC+AGG | + | chr4_3:32093854-32093873 | None:intergenic | 50.0% | |
| ! | CGTACAAACTGTGACTGGCT+AGG | + | chr4_3:32093867-32093886 | None:intergenic | 50.0% |
| GGTTGCGTACAAACTGTGAC+TGG | + | chr4_3:32093872-32093891 | None:intergenic | 50.0% | |
| ATCCAAAGGATGGAGGAGAG+TGG | - | chr4_3:32093960-32093979 | Msa0638130:CDS | 50.0% | |
| !!! | GGATAGGAGCGTCGGTTTTG+CGG | - | chr4_3:32090736-32090755 | Msa0638130:three_prime_UTR | 55.0% |
| CTCCATCCATCGATGGCTTC+TGG | - | chr4_3:32090862-32090881 | Msa0638130:three_prime_UTR | 55.0% | |
| GCTTCTGGATCATCTGGTCG+CGG | - | chr4_3:32090877-32090896 | Msa0638130:three_prime_UTR | 55.0% | |
| CGGATGCAAAATCGAAGCCG+GGG | + | chr4_3:32090906-32090925 | None:intergenic | 55.0% | |
| !! | ATGATCGAGTTGGGAGGGGT+TGG | - | chr4_3:32091109-32091128 | Msa0638130:CDS | 55.0% |
| CAGTTCCTAGGGAAGAGCTC+CGG | + | chr4_3:32091289-32091308 | None:intergenic | 55.0% | |
| GCTCTTCCCTAGGAACTGGA+TGG | - | chr4_3:32091291-32091310 | Msa0638130:CDS | 55.0% | |
| !! | GGTGGATTATAGGCAGCAGC+AGG | + | chr4_3:32091479-32091498 | None:intergenic | 55.0% |
| CTGCCAGGGCCATGCAATTA+AGG | - | chr4_3:32092167-32092186 | Msa0638130:intron | 55.0% | |
| GGTCCTTAATTGCATGGCCC+TGG | + | chr4_3:32092173-32092192 | None:intergenic | 55.0% | |
| GGGCCATGCAATTAAGGACC+AGG | - | chr4_3:32092173-32092192 | Msa0638130:intron | 55.0% | |
| GCAGAGCAAGAGCTAACTGC+TGG | + | chr4_3:32093089-32093108 | None:intergenic | 55.0% | |
| ! | TTTGTTGGTGGAGCTTGGGC+CGG | + | chr4_3:32093153-32093172 | None:intergenic | 55.0% |
| CCCGGGACATGTCTTGTAGT+TGG | + | chr4_3:32093284-32093303 | None:intergenic | 55.0% | |
| ACTACAAGACATGTCCCGGG+TGG | - | chr4_3:32093284-32093303 | Msa0638130:CDS | 55.0% | |
| TGTAGGTTGTTGAGCCACCC+GGG | + | chr4_3:32093301-32093320 | None:intergenic | 55.0% | |
| GTGTAGGTTGTTGAGCCACC+CGG | + | chr4_3:32093302-32093321 | None:intergenic | 55.0% | |
| GGATACACAGTAGACGAGGG+GGG | + | chr4_3:32093450-32093469 | None:intergenic | 55.0% | |
| GATTTGATGCTTGGCTGGGC+TGG | + | chr4_3:32093479-32093498 | None:intergenic | 55.0% | |
| ! | GGCAGTGTTTCTGTGGGTGA+TGG | + | chr4_3:32093501-32093520 | None:intergenic | 55.0% |
| GGTTGCGGAACCCCTGAATA+TGG | + | chr4_3:32093546-32093565 | None:intergenic | 55.0% | |
| TATTCAGGGGTTCCGCAACC+AGG | - | chr4_3:32093546-32093565 | Msa0638130:intron | 55.0% | |
| TTGCATGGAATCAGCACGGC+TGG | + | chr4_3:32093574-32093593 | None:intergenic | 55.0% | |
| CCTCCACCCCAGCAAATCAA+GGG | - | chr4_3:32093633-32093652 | Msa0638130:intron | 55.0% | |
| AAACGTCGCCTGGTTGGGAA+GGG | + | chr4_3:32093665-32093684 | None:intergenic | 55.0% | |
| TAAACGTCGCCTGGTTGGGA+AGG | + | chr4_3:32093666-32093685 | None:intergenic | 55.0% | |
| TCCCAACCAGGCGACGTTTA+TGG | - | chr4_3:32093666-32093685 | Msa0638130:intron | 55.0% | |
| GTCCATAAACGTCGCCTGGT+TGG | + | chr4_3:32093671-32093690 | None:intergenic | 55.0% | |
| CTAGGTCCATAAACGTCGCC+TGG | + | chr4_3:32093675-32093694 | None:intergenic | 55.0% | |
| GGCGACGTTTATGGACCTAG+CGG | - | chr4_3:32093675-32093694 | Msa0638130:intron | 55.0% | |
| GCGACGTTTATGGACCTAGC+GGG | - | chr4_3:32093676-32093695 | Msa0638130:intron | 55.0% | |
| !! | ATGATGGTGGTGAGGGAGGA+AGG | - | chr4_3:32093745-32093764 | Msa0638130:intron | 55.0% |
| !! | TGATGGTGGTGAGGGAGGAA+GGG | - | chr4_3:32093746-32093765 | Msa0638130:intron | 55.0% |
| AAATGAGAGGGTTGGGGTGG+TGG | + | chr4_3:32093780-32093799 | None:intergenic | 55.0% | |
| GCAAAATGAGAGGGTTGGGG+TGG | + | chr4_3:32093783-32093802 | None:intergenic | 55.0% | |
| ! | CCAGGAGATTGGGGTTCTGA+AGG | + | chr4_3:32093836-32093855 | None:intergenic | 55.0% |
| CCTTCAGAACCCCAATCTCC+TGG | - | chr4_3:32093833-32093852 | Msa0638130:intron | 55.0% | |
| TTTGGATCACGCTCGCCACA+TGG | + | chr4_3:32093947-32093966 | None:intergenic | 55.0% | |
| ATGTGGCGAGCGTGATCCAA+AGG | - | chr4_3:32093946-32093965 | Msa0638130:intron | 55.0% | |
| GAGCGTGATCCAAAGGATGG+AGG | - | chr4_3:32093953-32093972 | Msa0638130:CDS | 55.0% | |
| GTCCACTCTCCTCCATCCTT+TGG | + | chr4_3:32093965-32093984 | None:intergenic | 55.0% | |
| TCATCTGGTCGCGGTAACCC+CGG | - | chr4_3:32090886-32090905 | Msa0638130:three_prime_UTR | 60.0% | |
| !! | ATCGAGTTGGGAGGGGTTGG+TGG | - | chr4_3:32091112-32091131 | Msa0638130:CDS | 60.0% |
| !! | TCGAGTTGGGAGGGGTTGGT+GGG | - | chr4_3:32091113-32091132 | Msa0638130:CDS | 60.0% |
| GAACTCCGGAGCTCTTCCCT+AGG | - | chr4_3:32091281-32091300 | Msa0638130:CDS | 60.0% | |
| CGGAGCTCTTCCCTAGGAAC+TGG | - | chr4_3:32091287-32091306 | Msa0638130:CDS | 60.0% | |
| ATGGCCCTGGCAGACATGAG+AGG | + | chr4_3:32092160-32092179 | None:intergenic | 60.0% | |
| TGAGACACTGCAGGAGCAGG+CGG | + | chr4_3:32093213-32093232 | None:intergenic | 60.0% | |
| AGCTGAGACACTGCAGGAGC+AGG | + | chr4_3:32093216-32093235 | None:intergenic | 60.0% | |
| GACCATTGCTGCTGCTGCTG+CGG | + | chr4_3:32093387-32093406 | None:intergenic | 60.0% | |
| GCAGCAGCAATGGTCTCAGC+AGG | - | chr4_3:32093392-32093411 | Msa0638130:CDS | 60.0% | |
| GACGAGGGGGGTCTCATTTG+AGG | + | chr4_3:32093438-32093457 | None:intergenic | 60.0% | |
| !! | GATGCTTGGCTGGGCTGGTA+TGG | + | chr4_3:32093474-32093493 | None:intergenic | 60.0% |
| GAATCAGCACGGCTGGATCC+TGG | + | chr4_3:32093567-32093586 | None:intergenic | 60.0% | |
| TTGCTGGGGTGGAGGCTGTT+GGG | + | chr4_3:32093628-32093647 | None:intergenic | 60.0% | |
| TTTGCTGGGGTGGAGGCTGT+TGG | + | chr4_3:32093629-32093648 | None:intergenic | 60.0% | |
| GCCTCCACCCCAGCAAATCA+AGG | - | chr4_3:32093632-32093651 | Msa0638130:intron | 60.0% | |
| !! | CCCTTGATTTGCTGGGGTGG+AGG | + | chr4_3:32093636-32093655 | None:intergenic | 60.0% |
| !! | GAGCCCTTGATTTGCTGGGG+TGG | + | chr4_3:32093639-32093658 | None:intergenic | 60.0% |
| GGCTCATTCCCTTCCCAACC+AGG | - | chr4_3:32093654-32093673 | Msa0638130:intron | 60.0% | |
| GGGATTCAGGGGTGACCATG+TGG | - | chr4_3:32093929-32093948 | Msa0638130:intron | 60.0% | |
| GGCGAGCGTGATCCAAAGGA+TGG | - | chr4_3:32093950-32093969 | Msa0638130:CDS | 60.0% | |
| TCACCCTGACCACCCTCTCT+GGG | + | chr4_3:32094045-32094064 | None:intergenic | 60.0% | |
| TTCACCCTGACCACCCTCTC+TGG | + | chr4_3:32094046-32094065 | None:intergenic | 60.0% | |
| !! | TTGGGAGGGGTTGGTGGGTG+AGG | - | chr4_3:32091118-32091137 | Msa0638130:CDS | 65.0% |
| TGGGGGAGCTGAGACACTGC+AGG | + | chr4_3:32093222-32093241 | None:intergenic | 65.0% | |
| ATTGCTGCTGCTGCTGCGGC+GGG | + | chr4_3:32093383-32093402 | None:intergenic | 65.0% | |
| CATTGCTGCTGCTGCTGCGG+CGG | + | chr4_3:32093384-32093403 | None:intergenic | 65.0% | |
| !! | GCTTGGCTGGGCTGGTATGG+AGG | + | chr4_3:32093471-32093490 | None:intergenic | 65.0% |
| GCACGGCTGGATCCTGGTTG+CGG | + | chr4_3:32093561-32093580 | None:intergenic | 65.0% | |
| TGCTGGGGTGGAGGCTGTTG+GGG | + | chr4_3:32093627-32093646 | None:intergenic | 65.0% | |
| GCTCTGTTGGCCCCCAGAGA+GGG | - | chr4_3:32094030-32094049 | Msa0638130:CDS | 65.0% | |
| ACCCTGACCACCCTCTCTGG+GGG | + | chr4_3:32094043-32094062 | None:intergenic | 65.0% | |
| CACCCTGACCACCCTCTCTG+GGG | + | chr4_3:32094044-32094063 | None:intergenic | 65.0% | |
| TTGGTGGAGCTTGGGCCGGC+GGG | + | chr4_3:32093149-32093168 | None:intergenic | 70.0% | |
| ! | GTTGGTGGAGCTTGGGCCGG+CGG | + | chr4_3:32093150-32093169 | None:intergenic | 70.0% |
| TTGCTGCTGCTGCTGCGGCG+GGG | + | chr4_3:32093382-32093401 | None:intergenic | 70.0% | |
| CGCCGCAGCAGCAGCAGCAA+TGG | - | chr4_3:32093382-32093401 | Msa0638130:CDS | 70.0% | |
| TGGACCTAGCGGGACCCACC+CGG | - | chr4_3:32093686-32093705 | Msa0638130:intron | 70.0% | |
| !! | AGGAGGAGGGAGTGCCGGGT+GGG | + | chr4_3:32093703-32093722 | None:intergenic | 70.0% |
| !! | CAGGAGGAGGAGGGAGTGCC+GGG | + | chr4_3:32093707-32093726 | None:intergenic | 70.0% |
| ! | CCAGGAGGAGGAGGGAGTGC+CGG | + | chr4_3:32093708-32093727 | None:intergenic | 70.0% |
| GGCTCTGTTGGCCCCCAGAG+AGG | - | chr4_3:32094029-32094048 | Msa0638130:CDS | 70.0% | |
| CTGTTGGCCCCCAGAGAGGG+TGG | - | chr4_3:32094033-32094052 | Msa0638130:CDS | 70.0% | |
| GCCCCCAGAGAGGGTGGTCA+GGG | - | chr4_3:32094039-32094058 | Msa0638130:CDS | 70.0% | |
| GCTCCTCAGCCGCAGCCTGC+AGG | - | chr4_3:32093120-32093139 | Msa0638130:intron | 75.0% | |
| GGTCCTGCAGGCTGCGGCTG+AGG | + | chr4_3:32093126-32093145 | None:intergenic | 75.0% | |
| TGGTGGAGCTTGGGCCGGCG+GGG | + | chr4_3:32093148-32093167 | None:intergenic | 75.0% | |
| TGCTGCTGCTGCTGCGGCGG+GGG | + | chr4_3:32093381-32093400 | None:intergenic | 75.0% | |
| ! | AGTGCCGGGTGGGTCCCGCT+AGG | + | chr4_3:32093693-32093712 | None:intergenic | 75.0% |
| !! | GAGGAGGAGGGAGTGCCGGG+TGG | + | chr4_3:32093704-32093723 | None:intergenic | 75.0% |
| CCGGCACTCCCTCCTCCTCC+TGG | - | chr4_3:32093705-32093724 | Msa0638130:intron | 75.0% | |
| GGCCCCCAGAGAGGGTGGTC+AGG | - | chr4_3:32094038-32094057 | Msa0638130:CDS | 75.0% | |
| ! | GGCGGGGGTCCTGCAGGCTG+CGG | + | chr4_3:32093132-32093151 | None:intergenic | 80.0% |
| ! | GCAGCCTGCAGGACCCCCGC+CGG | - | chr4_3:32093131-32093150 | Msa0638130:intron | 80.0% |
| ! | GGTGGAGCTTGGGCCGGCGG+GGG | + | chr4_3:32093147-32093166 | None:intergenic | 80.0% |
| ! | TGGGCCGGCGGGGGTCCTGC+AGG | + | chr4_3:32093138-32093157 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 32090733 | 32094242 | 32090733 | ID=Msa0638130;Name=Msa0638130 |
| chr4_3 | mRNA | 32090733 | 32094242 | 32090733 | ID=Msa0638130-mRNA-1;Parent=Msa0638130;Name=Msa0638130-mRNA-1;_AED=0.01;_eAED=0.01;_QI=141|1|1|1|1|1|3|178|534 |
| chr4_3 | exon | 32090733 | 32092074 | 32090733 | ID=Msa0638130-mRNA-1:exon:7497;Parent=Msa0638130-mRNA-1 |
| chr4_3 | exon | 32093251 | 32093538 | 32093251 | ID=Msa0638130-mRNA-1:exon:7496;Parent=Msa0638130-mRNA-1 |
| chr4_3 | exon | 32093949 | 32094242 | 32093949 | ID=Msa0638130-mRNA-1:exon:7495;Parent=Msa0638130-mRNA-1 |
| chr4_3 | five_prime_UTR | 32094102 | 32094242 | 32094102 | ID=Msa0638130-mRNA-1:five_prime_utr;Parent=Msa0638130-mRNA-1 |
| chr4_3 | CDS | 32093949 | 32094101 | 32093949 | ID=Msa0638130-mRNA-1:cds;Parent=Msa0638130-mRNA-1 |
| chr4_3 | CDS | 32093251 | 32093538 | 32093251 | ID=Msa0638130-mRNA-1:cds;Parent=Msa0638130-mRNA-1 |
| chr4_3 | CDS | 32090911 | 32092074 | 32090911 | ID=Msa0638130-mRNA-1:cds;Parent=Msa0638130-mRNA-1 |
| chr4_3 | three_prime_UTR | 32090733 | 32090910 | 32090733 | ID=Msa0638130-mRNA-1:three_prime_utr;Parent=Msa0638130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
