AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0932660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0932660 MtrunA17_Chr6g0449531 95.782 569 11 6 1 560 1 565 0.0 1061
Msa0932660 MtrunA17_Chr6g0449551 64.810 395 76 7 160 530 1 356 7.77e-135 396
Msa0932660 MtrunA17_Chr4g0021121 29.885 174 93 4 55 215 12 169 6.01e-19 90.1
Msa0932660 MtrunA17_Chr6g0449541 54.082 98 32 3 54 147 24 112 9.75e-19 82.0
Msa0932660 MtrunA17_Chr2g0324351 30.952 168 110 3 48 215 6 167 2.08e-16 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0932660 AT3G01560.1 43.357 572 225 19 1 546 1 499 2.19e-91 290
Msa0932660 AT3G01560.2 44.884 430 166 14 124 546 5 370 2.35e-68 226
Msa0932660 AT5G14540.1 41.692 331 126 11 1 303 7 298 1.60e-56 199
Msa0932660 AT4G28300.1 31.325 166 103 3 54 213 14 174 8.57e-16 80.5
Msa0932660 AT4G28300.2 37.778 90 56 0 124 213 27 116 6.04e-15 77.8

Find 203 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAATACGACGTCGTTTA+TGG 0.118460 6_3:+918040 Msa0932660:exon
TCTGGATATGGTACATTATC+TGG 0.152917 6_3:+923540 Msa0932660:CDS
TTTCCACGTTATCTTTGATT+TGG 0.235729 6_3:+924279 Msa0932660:three_prime_UTR
GGAGGTTGAGGAGGTGCATT+AGG 0.241389 6_3:-923051 None:intergenic
GCTTATCCAGCACTGTATTT+AGG 0.248589 6_3:-923860 None:intergenic
GGCAGTTGGTATTGCTGATT+TGG 0.254348 6_3:-923192 None:intergenic
GTTCTCCTGGAGCTGGTAAC+AGG 0.264309 6_3:+923733 Msa0932660:CDS
TCAATAAATAAAAGTGGATT+TGG 0.268544 6_3:+924192 Msa0932660:three_prime_UTR
TTGCAGTTGAGGTGGATTTC+CGG 0.277046 6_3:-923337 None:intergenic
CTAACTGTTAACAGATTTGA+TGG 0.282200 6_3:+924252 Msa0932660:three_prime_UTR
AGTGAGAATTACTTTGGAAT+TGG 0.300882 6_3:-918312 None:intergenic
CAACCTTCCCAACAGTTCTA+TGG 0.307696 6_3:+923462 Msa0932660:CDS
TGTGCAGAACTATGGTTCTT+TGG 0.308399 6_3:+921167 Msa0932660:intron
CTTCTTCTTCGTGTTGTTCA+CGG 0.325218 6_3:-918142 None:intergenic
TGAACAGGTGATGGCAAGTA+TGG 0.333233 6_3:-923156 None:intergenic
GAAGATATTGTTGAGTTTGC+AGG 0.333603 6_3:-922984 None:intergenic
GGGATCTGAGAGTATTGATT+TGG 0.338854 6_3:-923108 None:intergenic
TTCCACGTTATCTTTGATTT+GGG 0.342700 6_3:+924280 Msa0932660:three_prime_UTR
AGATGGTGGCTGGCGGAGAT+TGG 0.345438 6_3:-923418 None:intergenic
GGATGTGGCTGCTGAGTTAA+AGG 0.364654 6_3:-923213 None:intergenic
CAACATATACAGGTGCAAAC+AGG 0.369517 6_3:+922805 Msa0932660:intron
GGAAGGTTGAGGAGGTCCGC+TGG 0.372446 6_3:-923448 None:intergenic
TCTGAGGAACAGTTGGGGTT+GGG 0.372597 6_3:-923128 None:intergenic
GGTGAGTTCTGGTTTCTACT+TGG 0.372649 6_3:-921332 None:intergenic
AGTCGACAAAGTTGCCACTA+TGG 0.375561 6_3:+923773 Msa0932660:CDS
GTTTATGGACAAACAGATAA+TGG 0.379393 6_3:+918055 Msa0932660:CDS
TATTGATTTGGAAGTTGAGC+TGG 0.379878 6_3:-923096 None:intergenic
TCACCATCTTGAGAGTTCTA+TGG 0.380351 6_3:+921350 Msa0932660:CDS
GCGAGTTACTCTTCTGGATA+TGG 0.385894 6_3:+923528 Msa0932660:CDS
AACGATGAAGAAGAATTATC+AGG 0.388069 6_3:-918266 None:intergenic
GAGGTTGAGGAGGTGCATTA+GGG 0.392897 6_3:-923050 None:intergenic
GTCGATGAAATCGTTGTTGT+TGG 0.399316 6_3:-918105 None:intergenic
TCAAAGAAATAAGAACAAAA+TGG 0.401372 6_3:-924102 None:intergenic
AGATCAAGATAGTCATGAAT+TGG 0.401418 6_3:-924154 None:intergenic
CCTACTGAGCCATATCGATA+TGG 0.402683 6_3:+923564 Msa0932660:CDS
TATCACTTCTTTCGCTATGA+TGG 0.407395 6_3:+923972 Msa0932660:three_prime_UTR
CCTGGTGCGAGTTACTCTTC+TGG 0.414200 6_3:+923522 Msa0932660:CDS
CATAAGGTGGTTCCTCTAGA+TGG 0.414395 6_3:-923374 None:intergenic
ACTCTCAAGATGGTGAGTTC+TGG 0.417745 6_3:-921343 None:intergenic
TCTGCAGTAAGTGGTGGTTC+AGG 0.419285 6_3:+923711 Msa0932660:CDS
GATGGTGGCTGGCGGAGATT+GGG 0.419902 6_3:-923417 None:intergenic
GGTCCGCTGGGTGGCTGAGA+TGG 0.426894 6_3:-923435 None:intergenic
GTTCACGGTTCTTCTTGTTA+AGG 0.428250 6_3:-918127 None:intergenic
TGTGGGAGTACGCGGGCAGT+AGG 0.431246 6_3:-923672 None:intergenic
TATGGCGGACCACCTCAATA+TGG 0.437524 6_3:+923582 Msa0932660:CDS
GAGTTCTATGGATGATTTGA+AGG 0.438756 6_3:+921362 Msa0932660:CDS
CTCTGAGGAACAGTTGGGGT+TGG 0.439164 6_3:-923129 None:intergenic
TGGGTGGCTGAGATGGTGGC+TGG 0.440005 6_3:-923428 None:intergenic
GGAATTTCCTGAGATTGAAC+AGG 0.441932 6_3:-923171 None:intergenic
AATTTGCATCATGTTCTAGA+AGG 0.442921 6_3:+921291 Msa0932660:CDS
GCTTTGAAGGTTTATGAGGA+AGG 0.455373 6_3:+924025 Msa0932660:three_prime_UTR
TTTCGCTATGATGGTTTATG+AGG 0.460042 6_3:+923981 Msa0932660:three_prime_UTR
GTGAGTTCTGGTTTCTACTT+GGG 0.461793 6_3:-921331 None:intergenic
TGGGTAACCGTTTCCACCAC+TGG 0.462468 6_3:-923643 None:intergenic
GATCTCTCTGAGGAACAGTT+GGG 0.462714 6_3:-923134 None:intergenic
AAGCTTCTGAGAATTGTTTG+AGG 0.463515 6_3:-918006 None:intergenic
GGTGCCCCTGGTTGAGGATG+TGG 0.464633 6_3:-923228 None:intergenic
GCCATCACCTGTTCAATCTC+AGG 0.466821 6_3:+923164 Msa0932660:CDS
CTGGATATGGTACATTATCT+GGG 0.467302 6_3:+923541 Msa0932660:CDS
ACCTCAACTGCAATCTTCCA+TGG 0.469026 6_3:+923347 Msa0932660:CDS
ACAGATGAAGTTTGCTGCAC+AGG 0.469179 6_3:-922946 None:intergenic
TTGTCGACTATATCATCAAC+AGG 0.475344 6_3:-923759 None:intergenic
TGCGGAGGTGCCCCTGGTTG+AGG 0.476318 6_3:-923234 None:intergenic
AGGTTGAGGAGGTGCATTAG+GGG 0.476796 6_3:-923049 None:intergenic
TCGAACAATGAAGAAACATA+TGG 0.477114 6_3:+921266 Msa0932660:CDS
GGTGGTCCGCCATATCGATA+TGG 0.479221 6_3:-923573 None:intergenic
GCTATGATGGTTTATGAGGA+AGG 0.481794 6_3:+923985 Msa0932660:three_prime_UTR
AAGATATTGTTGAGTTTGCA+GGG 0.482811 6_3:-922983 None:intergenic
CAGCAACAGAGAGGTTGGTT+TGG 0.486990 6_3:+923909 Msa0932660:CDS
GGATCTCTCTGAGGAACAGT+TGG 0.488207 6_3:-923135 None:intergenic
GTCACAACTACCTAACGCTT+CGG 0.489064 6_3:+923614 Msa0932660:CDS
GTATCTGTTGGAAATAATCA+TGG 0.490366 6_3:+921384 Msa0932660:CDS
GGTTCAGGTTCTCCTGGAGC+TGG 0.491108 6_3:+923726 Msa0932660:CDS
GTTTCCCTCACATGATCTCT+AGG 0.493026 6_3:-923801 None:intergenic
AGTGGTGGTTCAGGTTCTCC+TGG 0.495836 6_3:+923720 Msa0932660:CDS
ATGCAGTAGGTATTGCTTGT+GGG 0.496173 6_3:-923689 None:intergenic
GAGGTGGCAAACTTTGTTGA+GGG 0.499915 6_3:-923074 None:intergenic
TGTTGATGCGGAGGTGCCCC+TGG 0.501541 6_3:-923240 None:intergenic
CCATATCGATATGGCTCAGT+AGG 0.503012 6_3:-923564 None:intergenic
TAAGTCTGAGAAGGAACATA+AGG 0.503459 6_3:-923390 None:intergenic
AATGCAAGCTCAGCTACAAC+TGG 0.504070 6_3:+922858 Msa0932660:CDS
GGTTGAGGAGGTGCATTAGG+GGG 0.504519 6_3:-923048 None:intergenic
CAACAGCCACCGCATTCATC+CGG 0.505529 6_3:+923318 Msa0932660:CDS
CTTTGAAGGTTTATGAGGAA+GGG 0.506268 6_3:+924026 Msa0932660:three_prime_UTR
AATAATCATGGAATCACTGA+TGG 0.511625 6_3:+921396 Msa0932660:CDS
TCCTGAGATTGAACAGGTGA+TGG 0.514309 6_3:-923165 None:intergenic
GATGAATGCGGTGGCTGTTG+TGG 0.514588 6_3:-923315 None:intergenic
GAAGGTTGAGGAGGTCCGCT+GGG 0.515293 6_3:-923447 None:intergenic
AACGCTTCGGCGGCTTCCAG+TGG 0.517765 6_3:+923627 Msa0932660:CDS
GCGGCTTCCAGTGGTGGAAA+CGG 0.518066 6_3:+923636 Msa0932660:CDS
ATCATGTGAGGGAAACGGTT+CGG 0.519055 6_3:+923808 Msa0932660:CDS
GTGGGAGTACGCGGGCAGTA+GGG 0.525756 6_3:-923671 None:intergenic
TTGAAGCATCAACAGCGCTC+TGG 0.526502 6_3:-921227 None:intergenic
GTCGACAAAGTTGCCACTAT+GGG 0.527260 6_3:+923774 Msa0932660:CDS
CAGCAGCCACATCCTCAACC+AGG 0.527408 6_3:+923222 Msa0932660:CDS
CACAGGATCTGATGTGGCAC+GGG 0.529555 6_3:-922929 None:intergenic
CCGCTGGGTGGCTGAGATGG+TGG 0.532280 6_3:-923432 None:intergenic
CGGTGTTCCATAGAACTGTT+GGG 0.532437 6_3:-923469 None:intergenic
GCTTCGGCGGCTTCCAGTGG+TGG 0.534650 6_3:+923630 Msa0932660:CDS
AACAGGGGTGCATGATATCA+AGG 0.535028 6_3:+922822 Msa0932660:CDS
TGATGGGAAATTGAGGCTGT+TGG 0.535199 6_3:+921413 Msa0932660:CDS
GTTGGAGAATATTCTTTCTG+AGG 0.538216 6_3:+921431 Msa0932660:CDS
CTATGATGGTTTATGAGGAA+GGG 0.539080 6_3:+923986 Msa0932660:three_prime_UTR
GTTCGGAAGCTGACAGAGAA+TGG 0.539452 6_3:+923825 Msa0932660:CDS
ATATGCAGCAACAGAGAGGT+TGG 0.542821 6_3:+923904 Msa0932660:CDS
ATTATCAGGAAGTGAACGAA+TGG 0.545429 6_3:-918252 None:intergenic
CCCATGGAAGATTGCAGTTG+AGG 0.546082 6_3:-923348 None:intergenic
GAAACCACGGGGATTGATTG+TGG 0.547752 6_3:-923024 None:intergenic
GATGATTTGAAGGTATCTGT+TGG 0.550649 6_3:+921372 Msa0932660:CDS
ATTTGGGTTGATCCATCTTG+AGG 0.552072 6_3:+924296 Msa0932660:three_prime_UTR
TTCTCCTGGAGCTGGTAACA+GGG 0.552561 6_3:+923734 Msa0932660:CDS
GGCTGTTGTGGAGGTAGATG+AGG 0.553096 6_3:-923303 None:intergenic
AACAGAGAGGTTGGTTTGGT+AGG 0.553859 6_3:+923913 Msa0932660:CDS
AACATATACAGGTGCAAACA+GGG 0.554029 6_3:+922806 Msa0932660:intron
ATGGAAGATTGCAGTTGAGG+TGG 0.554693 6_3:-923345 None:intergenic
GGAACCCTGTTACCAGCTCC+AGG 0.557039 6_3:-923738 None:intergenic
GACTGTTTACTACCATATTG+AGG 0.557194 6_3:-923594 None:intergenic
CCACAATACCAACCTCAAGA+TGG 0.558214 6_3:-924308 None:intergenic
CGCGGGCAGTAGGGAGCTGT+GGG 0.561381 6_3:-923662 None:intergenic
TAGAGATCATGTGAGGGAAA+CGG 0.562181 6_3:+923803 Msa0932660:CDS
GTGGCTGAGATGGTGGCTGG+CGG 0.563635 6_3:-923425 None:intergenic
CCTACTGCATCTGCAGTAAG+TGG 0.565690 6_3:+923702 Msa0932660:CDS
TTGGGAGGATAAGTCTGAGA+AGG 0.566348 6_3:-923399 None:intergenic
GCGGTGTTCCATAGAACTGT+TGG 0.568740 6_3:-923470 None:intergenic
ACGCGGGCAGTAGGGAGCTG+TGG 0.569642 6_3:-923663 None:intergenic
GGTGGCTGGCGGAGATTGGG+AGG 0.569643 6_3:-923414 None:intergenic
TTTGAAGGTTTATGAGGAAG+GGG 0.571670 6_3:+924027 Msa0932660:three_prime_UTR
TATGATGGTTTATGAGGAAG+GGG 0.571790 6_3:+923987 Msa0932660:three_prime_UTR
TTATCAGGAAGTGAACGAAT+GGG 0.573173 6_3:-918251 None:intergenic
GCACAGGATCTGATGTGGCA+CGG 0.579401 6_3:-922930 None:intergenic
GTATTGCTTGTGGGAGTACG+CGG 0.579602 6_3:-923680 None:intergenic
TAGAACTGTTGGGAAGGTTG+AGG 0.579906 6_3:-923459 None:intergenic
GGAGGTGGCAAACTTTGTTG+AGG 0.579955 6_3:-923075 None:intergenic
ATGGGTTGAAAATCGTAGCT+AGG 0.582541 6_3:-918233 None:intergenic
CAGATAATGGATCTAAGCCA+TGG 0.583832 6_3:+918068 Msa0932660:CDS
CCTCAACTGCAATCTTCCAT+GGG 0.585108 6_3:+923348 Msa0932660:CDS
CTGGATAAGCTTATGAATGA+AGG 0.585757 6_3:+923873 Msa0932660:CDS
AGCAGCCACATCCTCAACCA+GGG 0.586197 6_3:+923223 Msa0932660:CDS
ATCTCTAGGGAATCCCATAG+TGG 0.587762 6_3:-923787 None:intergenic
AGTTGACCTAAATACAGTGC+TGG 0.587959 6_3:+923854 Msa0932660:CDS
TGATTTGGAAGTTGAGCTGG+AGG 0.590060 6_3:-923093 None:intergenic
CATCCATAGAACTCTCAAGA+TGG 0.597918 6_3:-921353 None:intergenic
AACTGTTGGGAAGGTTGAGG+AGG 0.598242 6_3:-923456 None:intergenic
ATAATCATGGAATCACTGAT+GGG 0.603214 6_3:+921397 Msa0932660:CDS
TTTGGAAGTTGAGCTGGAGG+TGG 0.603503 6_3:-923090 None:intergenic
GGCTGAGAGTATTGATGATG+AGG 0.603851 6_3:-923276 None:intergenic
GGTGGCAAACTTTGTTGAGG+GGG 0.604162 6_3:-923072 None:intergenic
GGTTGAGGAGGTCCGCTGGG+TGG 0.604968 6_3:-923444 None:intergenic
TGTGGAAGATTATAAGACGA+AGG 0.605650 6_3:-923006 None:intergenic
TGCTGATATTGTTGATGCGG+AGG 0.607900 6_3:-923249 None:intergenic
TTATGTTTGTGCTTAAAACG+TGG 0.608517 6_3:-917974 None:intergenic
TTCCTCTAGATGGTGACCCA+TGG 0.609804 6_3:-923364 None:intergenic
GATGCAGTAGGTATTGCTTG+TGG 0.612043 6_3:-923690 None:intergenic
TTCTAGAAGGTGTTAGTGCG+CGG 0.613505 6_3:+921304 Msa0932660:CDS
TTTCCCTCACATGATCTCTA+GGG 0.616191 6_3:-923800 None:intergenic
TTCCATGGGTCACCATCTAG+AGG 0.616790 6_3:+923362 Msa0932660:CDS
CCACTTACTGCAGATGCAGT+AGG 0.618868 6_3:-923702 None:intergenic
GTCTGCTGATATTGTTGATG+CGG 0.620702 6_3:-923252 None:intergenic
TTCTATGGAACACCGCCACA+AGG 0.620721 6_3:+923477 Msa0932660:CDS
AAGCTTATGAATGAAGGTGG+TGG 0.622241 6_3:+923879 Msa0932660:CDS
TTGAAGGTTTATGAGGAAGG+GGG 0.623366 6_3:+924028 Msa0932660:three_prime_UTR
GAACCACCATCGAGTAGACC+TGG 0.628427 6_3:+923504 Msa0932660:CDS
GAATCACTGATGGGAAATTG+AGG 0.629747 6_3:+921406 Msa0932660:CDS
GAATGCGGTGGCTGTTGTGG+AGG 0.630061 6_3:-923312 None:intergenic
GCTGCTGAGTTAAAGGCAGT+TGG 0.630771 6_3:-923206 None:intergenic
GTTCCATAGAACTGTTGGGA+AGG 0.631446 6_3:-923465 None:intergenic
GCTGAGAGTATTGATGATGA+GGG 0.632355 6_3:-923275 None:intergenic
GTCTGAGAAGGAACATAAGG+TGG 0.637200 6_3:-923387 None:intergenic
TCTGTTAACAGTTAGTTGTG+TGG 0.639775 6_3:-924244 None:intergenic
ATCTCTCTGAGGAACAGTTG+GGG 0.642126 6_3:-923133 None:intergenic
CTCGCACCAGGTCTACTCGA+TGG 0.643974 6_3:-923510 None:intergenic
TAAACCTTCAAAGCAAAACA+AGG 0.644842 6_3:-924016 None:intergenic
TGGAAGATGATGATCCTCCA+TGG 0.644949 6_3:-918085 None:intergenic
GTAGCTAGGAACAATATCAT+CGG 0.645739 6_3:-918219 None:intergenic
GCAGCCACATCCTCAACCAG+GGG 0.647975 6_3:+923224 Msa0932660:CDS
TGTGGAGGTAGATGAGGCGG+TGG 0.648997 6_3:-923297 None:intergenic
GAATTGGAATCAGAATTCCA+AGG 0.649644 6_3:-918296 None:intergenic
AACCCAAATCAAAGATAACG+TGG 0.656028 6_3:-924282 None:intergenic
ACTGCATCTGCAGTAAGTGG+TGG 0.658963 6_3:+923705 Msa0932660:CDS
AGGTGGCAAACTTTGTTGAG+GGG 0.660893 6_3:-923073 None:intergenic
TGTTGTGGAGGTAGATGAGG+CGG 0.661173 6_3:-923300 None:intergenic
AGATATTGTTGAGTTTGCAG+GGG 0.662805 6_3:-922982 None:intergenic
GATGGTGGTTCATATCCTTG+TGG 0.666986 6_3:-923492 None:intergenic
TATTGCTTGTGGGAGTACGC+GGG 0.670170 6_3:-923679 None:intergenic
GATTCCCTAGAGATCATGTG+AGG 0.674405 6_3:+923796 Msa0932660:CDS
TGTTTACTACCATATTGAGG+TGG 0.680049 6_3:-923591 None:intergenic
GCACCAGGTCTACTCGATGG+TGG 0.681299 6_3:-923507 None:intergenic
CCACCATCTCAGCCACCCAG+CGG 0.689523 6_3:+923432 Msa0932660:CDS
ATTCCCTAGAGATCATGTGA+GGG 0.691841 6_3:+923797 Msa0932660:CDS
GGTGGATTTCCGGATGAATG+CGG 0.691921 6_3:-923327 None:intergenic
GATAAGCTTATGAATGAAGG+TGG 0.692443 6_3:+923876 Msa0932660:CDS
ACAACTACCTAACGCTTCGG+CGG 0.699351 6_3:+923617 Msa0932660:CDS
ACTGAGCCATATCGATATGG+CGG 0.701260 6_3:+923567 Msa0932660:CDS
GGCAAGTATGGATCTCTCTG+AGG 0.701957 6_3:-923144 None:intergenic
GGATTTCCGGATGAATGCGG+TGG 0.703500 6_3:-923324 None:intergenic
GGTGGTTCATATCCTTGTGG+CGG 0.711124 6_3:-923489 None:intergenic
ATGATGGTTTATGAGGAAGG+GGG 0.718881 6_3:+923988 Msa0932660:three_prime_UTR
TTGCTGCACAGGATCTGATG+TGG 0.720740 6_3:-922935 None:intergenic
CTGAGAGTATTGATGATGAG+GGG 0.722939 6_3:-923274 None:intergenic
TCTTCCACAATCAATCCCCG+TGG 0.724568 6_3:+923020 Msa0932660:CDS
ACATATACAGGTGCAAACAG+GGG 0.731424 6_3:+922807 Msa0932660:intron
GGTGATATGCAGCAACAGAG+AGG 0.768274 6_3:+923900 Msa0932660:CDS
ATAATGGATCTAAGCCATGG+AGG 0.784217 6_3:+918071 Msa0932660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATAAATTTATATACTTA+GGG - chr6_3:919032-919051 None:intergenic 10.0%
!! TCTTATAAATTTATATACTT+AGG - chr6_3:919033-919052 None:intergenic 10.0%
!! TGTATATATAATTATATAGT+TGG + chr6_3:921986-922005 Msa0932660:intron 10.0%
!!! TATTTTAAATTTCTTTAATG+GGG + chr6_3:922350-922369 Msa0932660:intron 10.0%
!!! TATTTTTCAATAAATAAAAG+TGG + chr6_3:924186-924205 Msa0932660:three_prime_UTR 10.0%
!! AATGATTATAATCGAAATTA+GGG - chr6_3:918346-918365 None:intergenic 15.0%
!! TAATGATTATAATCGAAATT+AGG - chr6_3:918347-918366 None:intergenic 15.0%
!! TTCTATTATAAATCATAATG+AGG + chr6_3:919217-919236 Msa0932660:intron 15.0%
!! TTATTCATATACTTAACTTA+AGG + chr6_3:920088-920107 Msa0932660:intron 15.0%
!!! TTTTGAGAAAGATTATTTTT+TGG - chr6_3:920411-920430 None:intergenic 15.0%
!! AACTTTGCATAATATTAAAA+AGG - chr6_3:920806-920825 None:intergenic 15.0%
!! TTATCTTAGTTATTTGTTTA+TGG + chr6_3:920932-920951 Msa0932660:intron 15.0%
!!! TAGTTTAACCTTAAAATTTT+CGG + chr6_3:921634-921653 Msa0932660:intron 15.0%
!! TTTGTGTGATTGATTAATTA+TGG + chr6_3:918408-918427 Msa0932660:intron 20.0%
!!! TAATTTGAAGTTTATAGCTT+AGG + chr6_3:918558-918577 Msa0932660:intron 20.0%
!! TATTATTTATAAGCTCGTTA+AGG + chr6_3:918731-918750 Msa0932660:intron 20.0%
!! ATTATAAATCATAATGAGGT+TGG + chr6_3:919221-919240 Msa0932660:intron 20.0%
!!! GAGTTTCTCAATTTTTTTTT+TGG - chr6_3:919308-919327 None:intergenic 20.0%
!! TTGAAATTGATTGTATAAAG+TGG + chr6_3:919461-919480 Msa0932660:intron 20.0%
!!! ATGTGTTTGTTGTATTTAAA+AGG + chr6_3:919805-919824 Msa0932660:intron 20.0%
!!! ATTTAATGCTTCTGAAAATA+TGG + chr6_3:919836-919855 Msa0932660:intron 20.0%
!!! TTTAATGCTTCTGAAAATAT+GGG + chr6_3:919837-919856 Msa0932660:intron 20.0%
!! AGTATATGAATAATTATGAG+TGG - chr6_3:920081-920100 None:intergenic 20.0%
!!! ATGAATTTTTTAAGTTACCA+AGG - chr6_3:920714-920733 None:intergenic 20.0%
!!! CTTTTTGTTGATTCAAATAT+TGG + chr6_3:921531-921550 Msa0932660:intron 20.0%
!!! ATTTTAGTTCATTTTTAGCA+TGG - chr6_3:921703-921722 None:intergenic 20.0%
!! TGAACTAAAATTAAAGCTTT+AGG + chr6_3:921712-921731 Msa0932660:intron 20.0%
!!! AAATTAAAGCTTTAGGTATT+AGG + chr6_3:921719-921738 Msa0932660:intron 20.0%
!! TTATAATGTTTGTCATTAGT+TGG + chr6_3:921858-921877 Msa0932660:intron 20.0%
!! TATAATGTTTGTCATTAGTT+GGG + chr6_3:921859-921878 Msa0932660:intron 20.0%
!!! TATTGAAAATTTTGTGAATG+TGG + chr6_3:922233-922252 Msa0932660:intron 20.0%
!!! ATTATTGTTTTCATCATGAA+AGG + chr6_3:922277-922296 Msa0932660:intron 20.0%
!! ACAAAGGAAAACAAATTATT+TGG + chr6_3:922592-922611 Msa0932660:intron 20.0%
!! AAAACAAATTATTTGGATGA+TGG + chr6_3:922599-922618 Msa0932660:intron 20.0%
!! AAACAAATTATTTGGATGAT+GGG + chr6_3:922600-922619 Msa0932660:intron 20.0%
!! AGAACAAAATGGTAAAAAAA+AGG - chr6_3:924094-924113 None:intergenic 20.0%
!! TCAAAGAAATAAGAACAAAA+TGG - chr6_3:924105-924124 None:intergenic 20.0%
!!! TCAATAAATAAAAGTGGATT+TGG + chr6_3:924192-924211 Msa0932660:three_prime_UTR 20.0%
! TCGTTAATTCATCACAAAAA+TGG + chr6_3:918182-918201 Msa0932660:CDS 25.0%
! TTAATTCATCACAAAAATGG+CGG + chr6_3:918185-918204 Msa0932660:CDS 25.0%
! TAAAGTAGTGAGAATTACTT+TGG - chr6_3:918321-918340 None:intergenic 25.0%
!! TTTGTCTTGTTGTGAAAATT+AGG + chr6_3:918442-918461 Msa0932660:intron 25.0%
!!! ATTTTGAGAGTTTAGATGAA+TGG + chr6_3:918476-918495 Msa0932660:intron 25.0%
!!! TGTTTTTGTATAAGCTATCT+TGG + chr6_3:918906-918925 Msa0932660:intron 25.0%
! TGAGATTATCTACTAAGTAT+GGG - chr6_3:918989-919008 None:intergenic 25.0%
! TTGAGATTATCTACTAAGTA+TGG - chr6_3:918990-919009 None:intergenic 25.0%
! AAAAAAAATTGAGAAACTCG+TGG + chr6_3:919309-919328 Msa0932660:intron 25.0%
! CCTTTAAACTACTCAATTAA+TGG - chr6_3:919359-919378 None:intergenic 25.0%
! CCATTAATTGAGTAGTTTAA+AGG + chr6_3:919356-919375 Msa0932660:intron 25.0%
!! TTGTCAAATAGTTGATATAG+TGG + chr6_3:919526-919545 Msa0932660:intron 25.0%
!!! AATGAAAAGTGTCTGTTAAA+AGG + chr6_3:919897-919916 Msa0932660:intron 25.0%
!! ACTTTGATGTTGTCATTTAT+AGG - chr6_3:920019-920038 None:intergenic 25.0%
! CTTTCAATGATACAAAGTAA+AGG + chr6_3:920203-920222 Msa0932660:intron 25.0%
!!! AGAAAGATTATTTTTTGGTC+GGG - chr6_3:920406-920425 None:intergenic 25.0%
!!! GAGAAAGATTATTTTTTGGT+CGG - chr6_3:920407-920426 None:intergenic 25.0%
! AATCTATACAACAATGGTTA+AGG + chr6_3:920554-920573 Msa0932660:intron 25.0%
!! AATTACAACATTTTGTACCT+TGG + chr6_3:920694-920713 Msa0932660:intron 25.0%
! TTGAATAAGTGCATAGTAAA+AGG + chr6_3:920824-920843 Msa0932660:intron 25.0%
!!! ACATTATTTTTGCTTTGCTT+TGG + chr6_3:921005-921024 Msa0932660:intron 25.0%
!!! CATTATTTTTGCTTTGCTTT+GGG + chr6_3:921006-921025 Msa0932660:intron 25.0%
!!! ATTATTTTTGCTTTGCTTTG+GGG + chr6_3:921007-921026 Msa0932660:intron 25.0%
! GAAATTAATGTTAGAAGTTG+AGG - chr6_3:921482-921501 None:intergenic 25.0%
! CAACTTCTAACATTAATTTC+TGG + chr6_3:921482-921501 Msa0932660:intron 25.0%
!!! TTGTTTTGATAAATTAAGCC+TGG - chr6_3:921585-921604 None:intergenic 25.0%
!! ATTGCAAACCGAAAATTTTA+AGG - chr6_3:921645-921664 None:intergenic 25.0%
!!! AAAATTTTCGGTTTGCAATT+TGG + chr6_3:921646-921665 Msa0932660:intron 25.0%
!!! AAATTTTCGGTTTGCAATTT+GGG + chr6_3:921647-921666 Msa0932660:intron 25.0%
! ATACTACTATACTAGATTAG+TGG + chr6_3:921778-921797 Msa0932660:intron 25.0%
! ATAATGTTTGTCATTAGTTG+GGG + chr6_3:921860-921879 Msa0932660:intron 25.0%
! TGAAAACAATAATGTAAGAG+TGG - chr6_3:922270-922289 None:intergenic 25.0%
! AACCTAAGAAAAAGTAACAA+AGG + chr6_3:922467-922486 Msa0932660:intron 25.0%
! ATGTCAAACAAAAGAGTAAA+AGG - chr6_3:922784-922803 None:intergenic 25.0%
TTATGTTTGTGCTTAAAACG+TGG - chr6_3:917977-917996 None:intergenic 30.0%
GTTTATGGACAAACAGATAA+TGG + chr6_3:918055-918074 Msa0932660:CDS 30.0%
AACGATGAAGAAGAATTATC+AGG - chr6_3:918269-918288 None:intergenic 30.0%
! ATTCTTCTTCATCGTTTTCA+AGG + chr6_3:918273-918292 Msa0932660:CDS 30.0%
!! AGTGAGAATTACTTTGGAAT+TGG - chr6_3:918315-918334 None:intergenic 30.0%
ACTAAGTAAAATCAGCTACA+TGG - chr6_3:918621-918640 None:intergenic 30.0%
!! ATGTAGCTGATTTTACTTAG+TGG + chr6_3:918620-918639 Msa0932660:intron 30.0%
!! TGTAGCTGATTTTACTTAGT+GGG + chr6_3:918621-918640 Msa0932660:intron 30.0%
! TGATTTTACTTAGTGGGATA+TGG + chr6_3:918627-918646 Msa0932660:intron 30.0%
AGTTTACACATAAGCACTAA+GGG - chr6_3:918853-918872 None:intergenic 30.0%
TAGTTTACACATAAGCACTA+AGG - chr6_3:918854-918873 None:intergenic 30.0%
!! CATAAGTTTTGTGACTGTTT+GGG - chr6_3:918959-918978 None:intergenic 30.0%
!! ACATAAGTTTTGTGACTGTT+TGG - chr6_3:918960-918979 None:intergenic 30.0%
ATAAATCATAATGAGGTTGG+TGG + chr6_3:919224-919243 Msa0932660:intron 30.0%
!!! TCGACGAATTTTTAGAATAG+GGG - chr6_3:919285-919304 None:intergenic 30.0%
!!! GTCGACGAATTTTTAGAATA+GGG - chr6_3:919286-919305 None:intergenic 30.0%
TATCAACTATTTGACAACAC+TGG - chr6_3:919523-919542 None:intergenic 30.0%
AACACAGTATTGTCAAATAG+CGG + chr6_3:919606-919625 Msa0932660:intron 30.0%
!!! CATGCTTTTTTGTTGTTCTT+AGG + chr6_3:919729-919748 Msa0932660:intron 30.0%
TTGTTCTTAGGATAATGCTA+GGG + chr6_3:919741-919760 Msa0932660:intron 30.0%
GTAGCAAGATAGTAAAACAT+GGG + chr6_3:919977-919996 Msa0932660:intron 30.0%
!!! TAGAGGAAGTATTTCTTTTG+TGG - chr6_3:920148-920167 None:intergenic 30.0%
AAAAGGTTCAAACTACGAAT+AGG + chr6_3:920266-920285 Msa0932660:intron 30.0%
AAAGGTTCAAACTACGAATA+GGG + chr6_3:920267-920286 Msa0932660:intron 30.0%
GATTGCAATCTATACAACAA+TGG + chr6_3:920548-920567 Msa0932660:intron 30.0%
AAAGATAAGTTTGTGAGATC+TGG + chr6_3:920862-920881 Msa0932660:intron 30.0%
! AAGTTTCAGCATTGAATGTT+TGG + chr6_3:920885-920904 Msa0932660:intron 30.0%
TTTCATGTATCAGACTAATC+TGG + chr6_3:921038-921057 Msa0932660:intron 30.0%
AATAATATATCGCACCATCT+TGG + chr6_3:921099-921118 Msa0932660:intron 30.0%
TCGAACAATGAAGAAACATA+TGG + chr6_3:921266-921285 Msa0932660:CDS 30.0%
! AATTTGCATCATGTTCTAGA+AGG + chr6_3:921291-921310 Msa0932660:CDS 30.0%
GTATCTGTTGGAAATAATCA+TGG + chr6_3:921384-921403 Msa0932660:CDS 30.0%
AATAATCATGGAATCACTGA+TGG + chr6_3:921396-921415 Msa0932660:CDS 30.0%
ATAATCATGGAATCACTGAT+GGG + chr6_3:921397-921416 Msa0932660:CDS 30.0%
!! CATTAATTTCTGGCAACATT+TGG + chr6_3:921492-921511 Msa0932660:intron 30.0%
!! TTGTCACTTTAGTTAACTCT+GGG + chr6_3:921821-921840 Msa0932660:intron 30.0%
!! GGAAAAGCATTGTAAAAGAA+AGG - chr6_3:922040-922059 None:intergenic 30.0%
TCATAATATCATAACCTGTG+AGG - chr6_3:922076-922095 None:intergenic 30.0%
! AATTTTGTGAATGTGGTTGT+TGG + chr6_3:922240-922259 Msa0932660:intron 30.0%
!!! AGCCTTTGTTACTTTTTCTT+AGG - chr6_3:922472-922491 None:intergenic 30.0%
TATTTAATCGTCAGCCAAAA+AGG + chr6_3:922496-922515 Msa0932660:intron 30.0%
!! ACACATTCCATTGTTTTGTA+AGG + chr6_3:922520-922539 Msa0932660:intron 30.0%
!! GTCGTTTTCTTCATTCATTT+AGG - chr6_3:922574-922593 None:intergenic 30.0%
ATGAATGAAGAAAACGACAA+AGG + chr6_3:922576-922595 Msa0932660:intron 30.0%
CATATGCATAAAGTTCTCTA+TGG - chr6_3:922626-922645 None:intergenic 30.0%
!! GTGTTTTTACATGCTACTAT+TGG + chr6_3:922685-922704 Msa0932660:intron 30.0%
ACTACCGTTTATTCTTATTC+TGG + chr6_3:922754-922773 Msa0932660:intron 30.0%
AGGACCAGAATAAGAATAAA+CGG - chr6_3:922761-922780 None:intergenic 30.0%
TCAAACAAAAGAGTAAAAGG+AGG - chr6_3:922781-922800 None:intergenic 30.0%
GTTTGACATACAACATATAC+AGG + chr6_3:922795-922814 Msa0932660:intron 30.0%
AAGATATTGTTGAGTTTGCA+GGG - chr6_3:922986-923005 None:intergenic 30.0%
TAAACCTTCAAAGCAAAACA+AGG - chr6_3:924019-924038 None:intergenic 30.0%
!!! TTTTGCTTTGAAGGTTTATG+AGG + chr6_3:924021-924040 Msa0932660:three_prime_UTR 30.0%
! TGAACTGTAATGTTTTCTTG+TGG + chr6_3:924129-924148 Msa0932660:three_prime_UTR 30.0%
! GAACTGTAATGTTTTCTTGT+GGG + chr6_3:924130-924149 Msa0932660:three_prime_UTR 30.0%
AGATCAAGATAGTCATGAAT+TGG - chr6_3:924157-924176 None:intergenic 30.0%
CTAACTGTTAACAGATTTGA+TGG + chr6_3:924252-924271 Msa0932660:three_prime_UTR 30.0%
TTTCCACGTTATCTTTGATT+TGG + chr6_3:924279-924298 Msa0932660:three_prime_UTR 30.0%
! TTCCACGTTATCTTTGATTT+GGG + chr6_3:924280-924299 Msa0932660:three_prime_UTR 30.0%
! AAGCTTCTGAGAATTGTTTG+AGG - chr6_3:918009-918028 None:intergenic 35.0%
AATGAATACGACGTCGTTTA+TGG + chr6_3:918040-918059 Msa0932660:exon 35.0%
GTAGCTAGGAACAATATCAT+CGG - chr6_3:918222-918241 None:intergenic 35.0%
TTATCAGGAAGTGAACGAAT+GGG - chr6_3:918254-918273 None:intergenic 35.0%
ATTATCAGGAAGTGAACGAA+TGG - chr6_3:918255-918274 None:intergenic 35.0%
GAATTGGAATCAGAATTCCA+AGG - chr6_3:918299-918318 None:intergenic 35.0%
TTACTTAGTGGGATATGGTT+TGG + chr6_3:918632-918651 Msa0932660:intron 35.0%
GTATAGCATTAGAGTCTGTT+TGG + chr6_3:918663-918682 Msa0932660:intron 35.0%
AAAATAAGCTCAACCCAAAC+AGG + chr6_3:918827-918846 Msa0932660:intron 35.0%
TTATATACTTAGGGCCTGTT+TGG - chr6_3:919023-919042 None:intergenic 35.0%
GAGAAACTCCGAATAAATTG+TGG + chr6_3:919107-919126 Msa0932660:intron 35.0%
AACTCCGAATAAATTGTGGT+TGG + chr6_3:919111-919130 Msa0932660:intron 35.0%
TCTGCCAACCACAATTTATT+CGG - chr6_3:919118-919137 None:intergenic 35.0%
!!! ACGAATTTTTAGAATAGGGG+AGG - chr6_3:919282-919301 None:intergenic 35.0%
!!! GGTCGACGAATTTTTAGAAT+AGG - chr6_3:919287-919306 None:intergenic 35.0%
AGTGCAGAGGTAATCTAAAT+TGG + chr6_3:919333-919352 Msa0932660:intron 35.0%
ATTAGATGTCAGTGTCAAAC+TGG - chr6_3:919395-919414 None:intergenic 35.0%
TCAAAATACACTTGCAAGAG+TGG - chr6_3:919445-919464 None:intergenic 35.0%
CTAACTTCAATCGTAAAACG+CGG - chr6_3:919687-919706 None:intergenic 35.0%
CGATTGAAGTTAGTGCTTAA+TGG + chr6_3:919694-919713 Msa0932660:intron 35.0%
TTGAAGTTAGTGCTTAATGG+AGG + chr6_3:919697-919716 Msa0932660:intron 35.0%
GTTGTTCTTAGGATAATGCT+AGG + chr6_3:919740-919759 Msa0932660:intron 35.0%
ATATGGGTCTTACTTACGTA+TGG + chr6_3:919853-919872 Msa0932660:intron 35.0%
TATGGGTCTTACTTACGTAT+GGG + chr6_3:919854-919873 Msa0932660:intron 35.0%
! AGTTCTAACACTGTCAAGAT+CGG + chr6_3:919922-919941 Msa0932660:intron 35.0%
GGTAGCAAGATAGTAAAACA+TGG + chr6_3:919976-919995 Msa0932660:intron 35.0%
! GTATTTCTTTTGTGGACTTC+TGG - chr6_3:920140-920159 None:intergenic 35.0%
CGAGAAAGATGAAAATTTCG+AGG + chr6_3:920319-920338 Msa0932660:intron 35.0%
AAAGATGAAAATTTCGAGGC+AGG + chr6_3:920323-920342 Msa0932660:intron 35.0%
AAGATGAAAATTTCGAGGCA+GGG + chr6_3:920324-920343 Msa0932660:intron 35.0%
AAGGTCAAACAACACGATAT+AGG + chr6_3:920363-920382 Msa0932660:intron 35.0%
AGGTCAAACAACACGATATA+GGG + chr6_3:920364-920383 Msa0932660:intron 35.0%
CATGCGATTTGACTCATTAT+GGG + chr6_3:920491-920510 Msa0932660:intron 35.0%
TGTAGCGTTGTGTAATACAT+AGG + chr6_3:921069-921088 Msa0932660:intron 35.0%
AAGAAAACCCTAAACCAAGA+TGG - chr6_3:921116-921135 None:intergenic 35.0%
! CCATAGTTCTGCACAAAATA+AGG - chr6_3:921162-921181 None:intergenic 35.0%
!!! CCTTATTTTGTGCAGAACTA+TGG + chr6_3:921159-921178 Msa0932660:intron 35.0%
GAGTTCTATGGATGATTTGA+AGG + chr6_3:921362-921381 Msa0932660:CDS 35.0%
!! GATGATTTGAAGGTATCTGT+TGG + chr6_3:921372-921391 Msa0932660:CDS 35.0%
GTTGGAGAATATTCTTTCTG+AGG + chr6_3:921431-921450 Msa0932660:CDS 35.0%
TTAATGTTAGAAGTTGAGGC+AGG - chr6_3:921478-921497 None:intergenic 35.0%
GCAATTTGGGTAACTATACT+TGG + chr6_3:921660-921679 Msa0932660:intron 35.0%
!! GTTGTCACTTTAGTTAACTC+TGG + chr6_3:921820-921839 Msa0932660:intron 35.0%
!! TGTCACTTTAGTTAACTCTG+GGG + chr6_3:921822-921841 Msa0932660:intron 35.0%
ATACAACCTTGATATCTCCT+AGG - chr6_3:921971-921990 None:intergenic 35.0%
TCTATCGTTTACAACTCCTA+TGG + chr6_3:922178-922197 Msa0932660:intron 35.0%
! CAATGGAATGTGTTCCTTTT+TGG - chr6_3:922513-922532 None:intergenic 35.0%
! GTGTTGACCTTACAAAACAA+TGG - chr6_3:922530-922549 None:intergenic 35.0%
ATTGGTGTATAATTGCGACT+CGG + chr6_3:922703-922722 Msa0932660:intron 35.0%
AACATATACAGGTGCAAACA+GGG + chr6_3:922806-922825 Msa0932660:intron 35.0%
AGATATTGTTGAGTTTGCAG+GGG - chr6_3:922985-923004 None:intergenic 35.0%
GAAGATATTGTTGAGTTTGC+AGG - chr6_3:922987-923006 None:intergenic 35.0%
TGTGGAAGATTATAAGACGA+AGG - chr6_3:923009-923028 None:intergenic 35.0%
!! TATTGATTTGGAAGTTGAGC+TGG - chr6_3:923099-923118 None:intergenic 35.0%
TAAGTCTGAGAAGGAACATA+AGG - chr6_3:923393-923412 None:intergenic 35.0%
TCTGGATATGGTACATTATC+TGG + chr6_3:923540-923559 Msa0932660:CDS 35.0%
CTGGATATGGTACATTATCT+GGG + chr6_3:923541-923560 Msa0932660:CDS 35.0%
TGTTTACTACCATATTGAGG+TGG - chr6_3:923594-923613 None:intergenic 35.0%
GACTGTTTACTACCATATTG+AGG - chr6_3:923597-923616 None:intergenic 35.0%
! TTGTCGACTATATCATCAAC+AGG - chr6_3:923762-923781 None:intergenic 35.0%
CTGGATAAGCTTATGAATGA+AGG + chr6_3:923873-923892 Msa0932660:CDS 35.0%
GATAAGCTTATGAATGAAGG+TGG + chr6_3:923876-923895 Msa0932660:CDS 35.0%
TATCACTTCTTTCGCTATGA+TGG + chr6_3:923972-923991 Msa0932660:three_prime_UTR 35.0%
TTTCGCTATGATGGTTTATG+AGG + chr6_3:923981-924000 Msa0932660:three_prime_UTR 35.0%
CTATGATGGTTTATGAGGAA+GGG + chr6_3:923986-924005 Msa0932660:three_prime_UTR 35.0%
TATGATGGTTTATGAGGAAG+GGG + chr6_3:923987-924006 Msa0932660:three_prime_UTR 35.0%
!!! CTATCCTTGTTTTGCTTTGA+AGG + chr6_3:924012-924031 Msa0932660:three_prime_UTR 35.0%
! CTTTGAAGGTTTATGAGGAA+GGG + chr6_3:924026-924045 Msa0932660:three_prime_UTR 35.0%
TTTGAAGGTTTATGAGGAAG+GGG + chr6_3:924027-924046 Msa0932660:three_prime_UTR 35.0%
TCTGTTAACAGTTAGTTGTG+TGG - chr6_3:924247-924266 None:intergenic 35.0%
AACCCAAATCAAAGATAACG+TGG - chr6_3:924285-924304 None:intergenic 35.0%
!! CAGATAATGGATCTAAGCCA+TGG + chr6_3:918068-918087 Msa0932660:CDS 40.0%
!! ATAATGGATCTAAGCCATGG+AGG + chr6_3:918071-918090 Msa0932660:CDS 40.0%
GTCGATGAAATCGTTGTTGT+TGG - chr6_3:918108-918127 None:intergenic 40.0%
GTTCACGGTTCTTCTTGTTA+AGG - chr6_3:918130-918149 None:intergenic 40.0%
! CTTCTTCTTCGTGTTGTTCA+CGG - chr6_3:918145-918164 None:intergenic 40.0%
ATTCATCACAAAAATGGCGG+TGG + chr6_3:918188-918207 Msa0932660:CDS 40.0%
! ATGGGTTGAAAATCGTAGCT+AGG - chr6_3:918236-918255 None:intergenic 40.0%
TCAAACAAGCCAATCCAAAC+AGG + chr6_3:919006-919025 Msa0932660:intron 40.0%
TAAATTGTGGTTGGCAGAGA+TGG + chr6_3:919120-919139 Msa0932660:intron 40.0%
AATACACTTGCAAGAGTGGA+AGG - chr6_3:919441-919460 None:intergenic 40.0%
AAGTTAGTGCTTAATGGAGG+AGG + chr6_3:919700-919719 Msa0932660:intron 40.0%
TTCTTAGGATAATGCTAGGG+AGG + chr6_3:919744-919763 Msa0932660:intron 40.0%
TCTTAGGATAATGCTAGGGA+GGG + chr6_3:919745-919764 Msa0932660:intron 40.0%
! CTTACGTATGGGCAACTTTT+AGG + chr6_3:919865-919884 Msa0932660:intron 40.0%
GGTATTCTATGATTCTGCCT+AGG + chr6_3:919943-919962 Msa0932660:intron 40.0%
! TGATTCTGCCTAGGATTAGT+TGG + chr6_3:919952-919971 Msa0932660:intron 40.0%
!! GATTCTGCCTAGGATTAGTT+GGG + chr6_3:919953-919972 Msa0932660:intron 40.0%
!! ATTCTGCCTAGGATTAGTTG+GGG + chr6_3:919954-919973 Msa0932660:intron 40.0%
ATGAGTGGTTTCAGATGCTA+TGG - chr6_3:920066-920085 None:intergenic 40.0%
ACAGAAGACATGAACAGAGA+GGG + chr6_3:920230-920249 Msa0932660:intron 40.0%
GAGAGATGTGAACTTCTGAA+TGG + chr6_3:920289-920308 Msa0932660:intron 40.0%
TGTGAACTTCTGAATGGAGA+AGG + chr6_3:920295-920314 Msa0932660:intron 40.0%
!! GGGTTTCTGAAGTACAGAAA+AGG + chr6_3:920344-920363 Msa0932660:intron 40.0%
CAACACGATATAGGGAAACA+AGG + chr6_3:920372-920391 Msa0932660:intron 40.0%
GCATGCGATTTGACTCATTA+TGG + chr6_3:920490-920509 Msa0932660:intron 40.0%
ATATCGCACCATCTTGGTTT+AGG + chr6_3:921105-921124 Msa0932660:intron 40.0%
TATCGCACCATCTTGGTTTA+GGG + chr6_3:921106-921125 Msa0932660:intron 40.0%
TGTGCAGAACTATGGTTCTT+TGG + chr6_3:921167-921186 Msa0932660:intron 40.0%
! GGATTCTTTTGAACCTGCAA+AGG + chr6_3:921188-921207 Msa0932660:CDS 40.0%
! TTTTCTACAGTCACCTTTGC+AGG - chr6_3:921204-921223 None:intergenic 40.0%
!! GTGAGTTCTGGTTTCTACTT+GGG - chr6_3:921334-921353 None:intergenic 40.0%
TCACCATCTTGAGAGTTCTA+TGG + chr6_3:921350-921369 Msa0932660:CDS 40.0%
CATCCATAGAACTCTCAAGA+TGG - chr6_3:921356-921375 None:intergenic 40.0%
GAATCACTGATGGGAAATTG+AGG + chr6_3:921406-921425 Msa0932660:CDS 40.0%
! GTCACTTTAGTTAACTCTGG+GGG + chr6_3:921823-921842 Msa0932660:intron 40.0%
CAGCCAGCATATACACAAAT+GGG - chr6_3:921927-921946 None:intergenic 40.0%
! CATTTGTGTATATGCTGGCT+GGG + chr6_3:921926-921945 Msa0932660:intron 40.0%
!! AAAGGCATCATCACAGATAG+AGG - chr6_3:922022-922041 None:intergenic 40.0%
CACAAGCATATGTTTGCCAT+AGG - chr6_3:922197-922216 None:intergenic 40.0%
TTAGCGTTATCGTTTCTCAC+AGG - chr6_3:922652-922671 None:intergenic 40.0%
CAACATATACAGGTGCAAAC+AGG + chr6_3:922805-922824 Msa0932660:intron 40.0%
ACATATACAGGTGCAAACAG+GGG + chr6_3:922807-922826 Msa0932660:intron 40.0%
!! GGGATCTGAGAGTATTGATT+TGG - chr6_3:923111-923130 None:intergenic 40.0%
GGAATTTCCTGAGATTGAAC+AGG - chr6_3:923174-923193 None:intergenic 40.0%
GTCTGCTGATATTGTTGATG+CGG - chr6_3:923255-923274 None:intergenic 40.0%
!! CTGAGAGTATTGATGATGAG+GGG - chr6_3:923277-923296 None:intergenic 40.0%
!! GCTGAGAGTATTGATGATGA+GGG - chr6_3:923278-923297 None:intergenic 40.0%
! ATGCAGTAGGTATTGCTTGT+GGG - chr6_3:923692-923711 None:intergenic 40.0%
ATTCCCTAGAGATCATGTGA+GGG + chr6_3:923797-923816 Msa0932660:CDS 40.0%
TTTCCCTCACATGATCTCTA+GGG - chr6_3:923803-923822 None:intergenic 40.0%
TAGAGATCATGTGAGGGAAA+CGG + chr6_3:923803-923822 Msa0932660:CDS 40.0%
AGTTGACCTAAATACAGTGC+TGG + chr6_3:923854-923873 Msa0932660:CDS 40.0%
GCTTATCCAGCACTGTATTT+AGG - chr6_3:923863-923882 None:intergenic 40.0%
AAGCTTATGAATGAAGGTGG+TGG + chr6_3:923879-923898 Msa0932660:CDS 40.0%
GCTATGATGGTTTATGAGGA+AGG + chr6_3:923985-924004 Msa0932660:three_prime_UTR 40.0%
ATGATGGTTTATGAGGAAGG+GGG + chr6_3:923988-924007 Msa0932660:three_prime_UTR 40.0%
!! GCTTTGAAGGTTTATGAGGA+AGG + chr6_3:924025-924044 Msa0932660:three_prime_UTR 40.0%
TTGAAGGTTTATGAGGAAGG+GGG + chr6_3:924028-924047 Msa0932660:three_prime_UTR 40.0%
TGGAAGATGATGATCCTCCA+TGG - chr6_3:918088-918107 None:intergenic 45.0%
!! CTTCATCGTTTTCAAGGCCT+TGG + chr6_3:918279-918298 Msa0932660:CDS 45.0%
TAAGCACTAAGGGCCTGTTT+GGG - chr6_3:918843-918862 None:intergenic 45.0%
ATAAGCACTAAGGGCCTGTT+TGG - chr6_3:918844-918863 None:intergenic 45.0%
TACTTAGGGCCTGTTTGGAT+TGG - chr6_3:919018-919037 None:intergenic 45.0%
ACCTTTCGCTCACAATAGCT+GGG + chr6_3:919147-919166 Msa0932660:intron 45.0%
ATAGTGGCGCTATAGCATAG+CGG + chr6_3:919542-919561 Msa0932660:intron 45.0%
!! TTCTGCCTAGGATTAGTTGG+GGG + chr6_3:919955-919974 Msa0932660:intron 45.0%
!! TCTTTTGTGGACTTCTGGCT+GGG - chr6_3:920135-920154 None:intergenic 45.0%
! TTCTTTTGTGGACTTCTGGC+TGG - chr6_3:920136-920155 None:intergenic 45.0%
TGAAAGATGACTTCCACGCA+AGG - chr6_3:920189-920208 None:intergenic 45.0%
CACAGAAGACATGAACAGAG+AGG + chr6_3:920229-920248 Msa0932660:intron 45.0%
!! TTCTAGAAGGTGTTAGTGCG+CGG + chr6_3:921304-921323 Msa0932660:CDS 45.0%
!! GGTGAGTTCTGGTTTCTACT+TGG - chr6_3:921335-921354 None:intergenic 45.0%
ACTCTCAAGATGGTGAGTTC+TGG - chr6_3:921346-921365 None:intergenic 45.0%
TGATGGGAAATTGAGGCTGT+TGG + chr6_3:921413-921432 Msa0932660:CDS 45.0%
TGTTAGAAGTTGAGGCAGGA+GGG - chr6_3:921474-921493 None:intergenic 45.0%
ATGTTAGAAGTTGAGGCAGG+AGG - chr6_3:921475-921494 None:intergenic 45.0%
GCACCCATTTGTGTATATGC+TGG + chr6_3:921921-921940 Msa0932660:intron 45.0%
CCAGCCAGCATATACACAAA+TGG - chr6_3:921928-921947 None:intergenic 45.0%
CCATTTGTGTATATGCTGGC+TGG + chr6_3:921925-921944 Msa0932660:intron 45.0%
! GTATATGCTGGCTGGGAAAA+TGG + chr6_3:921933-921952 Msa0932660:intron 45.0%
TGGGAAAATGGTGGTCATGT+GGG + chr6_3:921945-921964 Msa0932660:intron 45.0%
ACCTGTGAGGCTATATTGTG+CGG - chr6_3:922063-922082 None:intergenic 45.0%
! AACAGGGGTGCATGATATCA+AGG + chr6_3:922822-922841 Msa0932660:CDS 45.0%
AATGCAAGCTCAGCTACAAC+TGG + chr6_3:922858-922877 Msa0932660:CDS 45.0%
!! ACAGATGAAGTTTGCTGCAC+AGG - chr6_3:922949-922968 None:intergenic 45.0%
AGGTGGCAAACTTTGTTGAG+GGG - chr6_3:923076-923095 None:intergenic 45.0%
GAGGTGGCAAACTTTGTTGA+GGG - chr6_3:923077-923096 None:intergenic 45.0%
! TGATTTGGAAGTTGAGCTGG+AGG - chr6_3:923096-923115 None:intergenic 45.0%
! ATCTCTCTGAGGAACAGTTG+GGG - chr6_3:923136-923155 None:intergenic 45.0%
! GATCTCTCTGAGGAACAGTT+GGG - chr6_3:923137-923156 None:intergenic 45.0%
! TGAACAGGTGATGGCAAGTA+TGG - chr6_3:923159-923178 None:intergenic 45.0%
TCCTGAGATTGAACAGGTGA+TGG - chr6_3:923168-923187 None:intergenic 45.0%
! GGCAGTTGGTATTGCTGATT+TGG - chr6_3:923195-923214 None:intergenic 45.0%
TGCTGATATTGTTGATGCGG+AGG - chr6_3:923252-923271 None:intergenic 45.0%
!! GGCTGAGAGTATTGATGATG+AGG - chr6_3:923279-923298 None:intergenic 45.0%
! TTGCAGTTGAGGTGGATTTC+CGG - chr6_3:923340-923359 None:intergenic 45.0%
ATGGAAGATTGCAGTTGAGG+TGG - chr6_3:923348-923367 None:intergenic 45.0%
ACCTCAACTGCAATCTTCCA+TGG + chr6_3:923347-923366 Msa0932660:CDS 45.0%
CCTCAACTGCAATCTTCCAT+GGG + chr6_3:923348-923367 Msa0932660:CDS 45.0%
CATAAGGTGGTTCCTCTAGA+TGG - chr6_3:923377-923396 None:intergenic 45.0%
GTCTGAGAAGGAACATAAGG+TGG - chr6_3:923390-923409 None:intergenic 45.0%
TTGGGAGGATAAGTCTGAGA+AGG - chr6_3:923402-923421 None:intergenic 45.0%
TAGAACTGTTGGGAAGGTTG+AGG - chr6_3:923462-923481 None:intergenic 45.0%
CAACCTTCCCAACAGTTCTA+TGG + chr6_3:923462-923481 Msa0932660:CDS 45.0%
GTTCCATAGAACTGTTGGGA+AGG - chr6_3:923468-923487 None:intergenic 45.0%
CGGTGTTCCATAGAACTGTT+GGG - chr6_3:923472-923491 None:intergenic 45.0%
! GATGGTGGTTCATATCCTTG+TGG - chr6_3:923495-923514 None:intergenic 45.0%
GCGAGTTACTCTTCTGGATA+TGG + chr6_3:923528-923547 Msa0932660:CDS 45.0%
CCATATCGATATGGCTCAGT+AGG - chr6_3:923567-923586 None:intergenic 45.0%
CCTACTGAGCCATATCGATA+TGG + chr6_3:923564-923583 Msa0932660:CDS 45.0%
ACTGAGCCATATCGATATGG+CGG + chr6_3:923567-923586 Msa0932660:CDS 45.0%
GTCACAACTACCTAACGCTT+CGG + chr6_3:923614-923633 Msa0932660:CDS 45.0%
! GATGCAGTAGGTATTGCTTG+TGG - chr6_3:923693-923712 None:intergenic 45.0%
AGTCGACAAAGTTGCCACTA+TGG + chr6_3:923773-923792 Msa0932660:CDS 45.0%
GTCGACAAAGTTGCCACTAT+GGG + chr6_3:923774-923793 Msa0932660:CDS 45.0%
! ATCTCTAGGGAATCCCATAG+TGG - chr6_3:923790-923809 None:intergenic 45.0%
GATTCCCTAGAGATCATGTG+AGG + chr6_3:923796-923815 Msa0932660:CDS 45.0%
GTTTCCCTCACATGATCTCT+AGG - chr6_3:923804-923823 None:intergenic 45.0%
ATCATGTGAGGGAAACGGTT+CGG + chr6_3:923808-923827 Msa0932660:CDS 45.0%
ATATGCAGCAACAGAGAGGT+TGG + chr6_3:923904-923923 Msa0932660:CDS 45.0%
!! AACAGAGAGGTTGGTTTGGT+AGG + chr6_3:923913-923932 Msa0932660:CDS 45.0%
!!! ATTATTTTAAATTTCTTTAA+TGG + chr6_3:922348-922367 Msa0932660:intron 5.0%
!!! TTATTTTAAATTTCTTTAAT+GGG + chr6_3:922349-922368 Msa0932660:intron 5.0%
GACCTTTCGCTCACAATAGC+TGG + chr6_3:919146-919165 Msa0932660:intron 50.0%
CCTTTCGCTCACAATAGCTG+GGG + chr6_3:919148-919167 Msa0932660:intron 50.0%
ACTCTCAAGCAATGCCAGGT+CGG - chr6_3:919256-919275 None:intergenic 50.0%
! AGAAACTCGTGGAAGTGCAG+AGG + chr6_3:919320-919339 Msa0932660:intron 50.0%
TGCTACCCCCAACTAATCCT+AGG - chr6_3:919963-919982 None:intergenic 50.0%
! TTCCACGCAAGGTTCTAGTG+GGG - chr6_3:920178-920197 None:intergenic 50.0%
! CTTCCACGCAAGGTTCTAGT+GGG - chr6_3:920179-920198 None:intergenic 50.0%
! ACTTCCACGCAAGGTTCTAG+TGG - chr6_3:920180-920199 None:intergenic 50.0%
AGGGTCGAGAGAGATGGAAA+AGG + chr6_3:920249-920268 Msa0932660:intron 50.0%
! TTGAAGCATCAACAGCGCTC+TGG - chr6_3:921230-921249 None:intergenic 50.0%
GTGTATGCTCTCGTGTAACC+AGG + chr6_3:921564-921583 Msa0932660:intron 50.0%
! TATGCTGGCTGGGAAAATGG+TGG + chr6_3:921936-921955 Msa0932660:intron 50.0%
CTGGGAAAATGGTGGTCATG+TGG + chr6_3:921944-921963 Msa0932660:intron 50.0%
TGTGGGCCTAGGAGATATCA+AGG + chr6_3:921962-921981 Msa0932660:intron 50.0%
CTGTGAGGCTATATTGTGCG+GGG - chr6_3:922061-922080 None:intergenic 50.0%
CCTGTGAGGCTATATTGTGC+GGG - chr6_3:922062-922081 None:intergenic 50.0%
TTGCTGCACAGGATCTGATG+TGG - chr6_3:922938-922957 None:intergenic 50.0%
TCTTCCACAATCAATCCCCG+TGG + chr6_3:923020-923039 Msa0932660:CDS 50.0%
GAAACCACGGGGATTGATTG+TGG - chr6_3:923027-923046 None:intergenic 50.0%
TGCATTAGGGGGAGAAACCA+CGG - chr6_3:923040-923059 None:intergenic 50.0%
! AGGTTGAGGAGGTGCATTAG+GGG - chr6_3:923052-923071 None:intergenic 50.0%
! GAGGTTGAGGAGGTGCATTA+GGG - chr6_3:923053-923072 None:intergenic 50.0%
GGTGGCAAACTTTGTTGAGG+GGG - chr6_3:923075-923094 None:intergenic 50.0%
GGAGGTGGCAAACTTTGTTG+AGG - chr6_3:923078-923097 None:intergenic 50.0%
TTTGGAAGTTGAGCTGGAGG+TGG - chr6_3:923093-923112 None:intergenic 50.0%
TCTGAGGAACAGTTGGGGTT+GGG - chr6_3:923131-923150 None:intergenic 50.0%
! GGATCTCTCTGAGGAACAGT+TGG - chr6_3:923138-923157 None:intergenic 50.0%
GGCAAGTATGGATCTCTCTG+AGG - chr6_3:923147-923166 None:intergenic 50.0%
GCCATCACCTGTTCAATCTC+AGG + chr6_3:923164-923183 Msa0932660:CDS 50.0%
GCTGCTGAGTTAAAGGCAGT+TGG - chr6_3:923209-923228 None:intergenic 50.0%
GGATGTGGCTGCTGAGTTAA+AGG - chr6_3:923216-923235 None:intergenic 50.0%
TGTTGTGGAGGTAGATGAGG+CGG - chr6_3:923303-923322 None:intergenic 50.0%
! GGTGGATTTCCGGATGAATG+CGG - chr6_3:923330-923349 None:intergenic 50.0%
CCCATGGAAGATTGCAGTTG+AGG - chr6_3:923351-923370 None:intergenic 50.0%
TTCCATGGGTCACCATCTAG+AGG + chr6_3:923362-923381 Msa0932660:CDS 50.0%
TTCCTCTAGATGGTGACCCA+TGG - chr6_3:923367-923386 None:intergenic 50.0%
AACTGTTGGGAAGGTTGAGG+AGG - chr6_3:923459-923478 None:intergenic 50.0%
GCGGTGTTCCATAGAACTGT+TGG - chr6_3:923473-923492 None:intergenic 50.0%
TTCTATGGAACACCGCCACA+AGG + chr6_3:923477-923496 Msa0932660:CDS 50.0%
GGTGGTTCATATCCTTGTGG+CGG - chr6_3:923492-923511 None:intergenic 50.0%
!! TATGGCGGACCACCTCAATA+TGG + chr6_3:923582-923601 Msa0932660:CDS 50.0%
ACAACTACCTAACGCTTCGG+CGG + chr6_3:923617-923636 Msa0932660:CDS 50.0%
! TATTGCTTGTGGGAGTACGC+GGG - chr6_3:923682-923701 None:intergenic 50.0%
! GTATTGCTTGTGGGAGTACG+CGG - chr6_3:923683-923702 None:intergenic 50.0%
CCACTTACTGCAGATGCAGT+AGG - chr6_3:923705-923724 None:intergenic 50.0%
CCTACTGCATCTGCAGTAAG+TGG + chr6_3:923702-923721 Msa0932660:CDS 50.0%
ACTGCATCTGCAGTAAGTGG+TGG + chr6_3:923705-923724 Msa0932660:CDS 50.0%
TCTGCAGTAAGTGGTGGTTC+AGG + chr6_3:923711-923730 Msa0932660:CDS 50.0%
TTCTCCTGGAGCTGGTAACA+GGG + chr6_3:923734-923753 Msa0932660:CDS 50.0%
GTTCGGAAGCTGACAGAGAA+TGG + chr6_3:923825-923844 Msa0932660:CDS 50.0%
GGTGATATGCAGCAACAGAG+AGG + chr6_3:923900-923919 Msa0932660:CDS 50.0%
! CAGCAACAGAGAGGTTGGTT+TGG + chr6_3:923909-923928 Msa0932660:CDS 50.0%
CCCCAGCTATTGTGAGCGAA+AGG - chr6_3:919151-919170 None:intergenic 55.0%
GCTCACAATAGCTGGGGTGT+GGG + chr6_3:919154-919173 Msa0932660:intron 55.0%
! CTGGGGTGTGGGTTATACTC+TGG + chr6_3:919165-919184 Msa0932660:intron 55.0%
GCACACTCTCAAGCAATGCC+AGG - chr6_3:919260-919279 None:intergenic 55.0%
GGATAATGCTAGGGAGGGTG+AGG + chr6_3:919750-919769 Msa0932660:intron 55.0%
TAGGGAGGGTGAGGCTCATT+GGG + chr6_3:919759-919778 Msa0932660:intron 55.0%
TCTAGTGGGGCTGAAGGTAG+AGG - chr6_3:920165-920184 None:intergenic 55.0%
! CAAGGTTCTAGTGGGGCTGA+AGG - chr6_3:920171-920190 None:intergenic 55.0%
ACAGAGAGGGTCGAGAGAGA+TGG + chr6_3:920243-920262 Msa0932660:intron 55.0%
AATGGTGGTCATGTGGGCCT+AGG + chr6_3:921951-921970 Msa0932660:intron 55.0%
CCCGCACAATATAGCCTCAC+AGG + chr6_3:922059-922078 Msa0932660:intron 55.0%
CACAGGATCTGATGTGGCAC+GGG - chr6_3:922932-922951 None:intergenic 55.0%
GCACAGGATCTGATGTGGCA+CGG - chr6_3:922933-922952 None:intergenic 55.0%
CATTAGGGGGAGAAACCACG+GGG - chr6_3:923038-923057 None:intergenic 55.0%
GCATTAGGGGGAGAAACCAC+GGG - chr6_3:923039-923058 None:intergenic 55.0%
! GGTTGAGGAGGTGCATTAGG+GGG - chr6_3:923051-923070 None:intergenic 55.0%
! GGAGGTTGAGGAGGTGCATT+AGG - chr6_3:923054-923073 None:intergenic 55.0%
CTTTGTTGAGGGGGAGGTTG+AGG - chr6_3:923066-923085 None:intergenic 55.0%
GGCAAACTTTGTTGAGGGGG+AGG - chr6_3:923072-923091 None:intergenic 55.0%
! CTCTGAGGAACAGTTGGGGT+TGG - chr6_3:923132-923151 None:intergenic 55.0%
AGCAGCCACATCCTCAACCA+GGG + chr6_3:923223-923242 Msa0932660:CDS 55.0%
GGCTGTTGTGGAGGTAGATG+AGG - chr6_3:923306-923325 None:intergenic 55.0%
GATGAATGCGGTGGCTGTTG+TGG - chr6_3:923318-923337 None:intergenic 55.0%
CAACAGCCACCGCATTCATC+CGG + chr6_3:923318-923337 Msa0932660:CDS 55.0%
GGATTTCCGGATGAATGCGG+TGG - chr6_3:923327-923346 None:intergenic 55.0%
GAACCACCATCGAGTAGACC+TGG + chr6_3:923504-923523 Msa0932660:CDS 55.0%
CCAGAAGAGTAACTCGCACC+AGG - chr6_3:923525-923544 None:intergenic 55.0%
CCTGGTGCGAGTTACTCTTC+TGG + chr6_3:923522-923541 Msa0932660:CDS 55.0%
GGTGGTCCGCCATATCGATA+TGG - chr6_3:923576-923595 None:intergenic 55.0%
TGGGTAACCGTTTCCACCAC+TGG - chr6_3:923646-923665 None:intergenic 55.0%
! AGTGGTGGTTCAGGTTCTCC+TGG + chr6_3:923720-923739 Msa0932660:CDS 55.0%
GTTCTCCTGGAGCTGGTAAC+AGG + chr6_3:923733-923752 Msa0932660:CDS 55.0%
TATGAGGAAGGGGGACTTCG+TGG + chr6_3:924037-924056 Msa0932660:three_prime_UTR 55.0%
ATGAGGAAGGGGGACTTCGT+GGG + chr6_3:924038-924057 Msa0932660:three_prime_UTR 55.0%
CGCTCACAATAGCTGGGGTG+TGG + chr6_3:919153-919172 Msa0932660:intron 60.0%
!! GTTGGTGGTTCTGACCGACC+TGG + chr6_3:919239-919258 Msa0932660:intron 60.0%
CTAGGGAGGGTGAGGCTCAT+TGG + chr6_3:919758-919777 Msa0932660:intron 60.0%
AGGGAGGGTGAGGCTCATTG+GGG + chr6_3:919760-919779 Msa0932660:intron 60.0%
AGCCCCACTAGAACCTTGCG+TGG + chr6_3:920173-920192 Msa0932660:intron 60.0%
TGTTGAGGGGGAGGTTGAGG+AGG - chr6_3:923063-923082 None:intergenic 60.0%
CAGCAGCCACATCCTCAACC+AGG + chr6_3:923222-923241 Msa0932660:CDS 60.0%
GCAGCCACATCCTCAACCAG+GGG + chr6_3:923224-923243 Msa0932660:CDS 60.0%
TGTGGAGGTAGATGAGGCGG+TGG - chr6_3:923300-923319 None:intergenic 60.0%
GAATGCGGTGGCTGTTGTGG+AGG - chr6_3:923315-923334 None:intergenic 60.0%
! GATGGTGGCTGGCGGAGATT+GGG - chr6_3:923420-923439 None:intergenic 60.0%
! AGATGGTGGCTGGCGGAGAT+TGG - chr6_3:923421-923440 None:intergenic 60.0%
GAAGGTTGAGGAGGTCCGCT+GGG - chr6_3:923450-923469 None:intergenic 60.0%
GCACCAGGTCTACTCGATGG+TGG - chr6_3:923510-923529 None:intergenic 60.0%
CTCGCACCAGGTCTACTCGA+TGG - chr6_3:923513-923532 None:intergenic 60.0%
! GCGGCTTCCAGTGGTGGAAA+CGG + chr6_3:923636-923655 Msa0932660:CDS 60.0%
! GGTTCAGGTTCTCCTGGAGC+TGG + chr6_3:923726-923745 Msa0932660:CDS 60.0%
GGAACCCTGTTACCAGCTCC+AGG - chr6_3:923741-923760 None:intergenic 60.0%
GGGAGGGTGAGGCTCATTGG+GGG + chr6_3:919761-919780 Msa0932660:intron 65.0%
GGTGCCCCTGGTTGAGGATG+TGG - chr6_3:923231-923250 None:intergenic 65.0%
!! TGTTGATGCGGAGGTGCCCC+TGG - chr6_3:923243-923262 None:intergenic 65.0%
! GTGGCTGAGATGGTGGCTGG+CGG - chr6_3:923428-923447 None:intergenic 65.0%
! TGGGTGGCTGAGATGGTGGC+TGG - chr6_3:923431-923450 None:intergenic 65.0%
CCACCATCTCAGCCACCCAG+CGG + chr6_3:923432-923451 Msa0932660:CDS 65.0%
GGAAGGTTGAGGAGGTCCGC+TGG - chr6_3:923451-923470 None:intergenic 65.0%
! CTGGAAGCCGCCGAAGCGTT+AGG - chr6_3:923627-923646 None:intergenic 65.0%
AACGCTTCGGCGGCTTCCAG+TGG + chr6_3:923627-923646 Msa0932660:CDS 65.0%
! GTGGGAGTACGCGGGCAGTA+GGG - chr6_3:923674-923693 None:intergenic 65.0%
! TGTGGGAGTACGCGGGCAGT+AGG - chr6_3:923675-923694 None:intergenic 65.0%
AGGAAGGGGGACTTCGTGGG+TGG + chr6_3:924041-924060 Msa0932660:three_prime_UTR 65.0%
!! TGCGGAGGTGCCCCTGGTTG+AGG - chr6_3:923237-923256 None:intergenic 70.0%
GGTGGCTGGCGGAGATTGGG+AGG - chr6_3:923417-923436 None:intergenic 70.0%
CCGCTGGGTGGCTGAGATGG+TGG - chr6_3:923435-923454 None:intergenic 70.0%
GGTCCGCTGGGTGGCTGAGA+TGG - chr6_3:923438-923457 None:intergenic 70.0%
GGTTGAGGAGGTCCGCTGGG+TGG - chr6_3:923447-923466 None:intergenic 70.0%
GCTTCGGCGGCTTCCAGTGG+TGG + chr6_3:923630-923649 Msa0932660:CDS 70.0%
CGCGGGCAGTAGGGAGCTGT+GGG - chr6_3:923665-923684 None:intergenic 70.0%
ACGCGGGCAGTAGGGAGCTG+TGG - chr6_3:923666-923685 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 917906 924318 917906 ID=Msa0932660;Name=Msa0932660
chr6_3 mRNA 917906 924318 917906 ID=Msa0932660-mRNA-1;Parent=Msa0932660;Name=Msa0932660-mRNA-1;_AED=0.22;_eAED=0.22;_QI=135|1|1|1|1|1|3|380|560
chr6_3 exon 917906 918322 917906 ID=Msa0932660-mRNA-1:exon:376;Parent=Msa0932660-mRNA-1
chr6_3 exon 921174 921452 921174 ID=Msa0932660-mRNA-1:exon:377;Parent=Msa0932660-mRNA-1
chr6_3 exon 922817 924318 922817 ID=Msa0932660-mRNA-1:exon:378;Parent=Msa0932660-mRNA-1
chr6_3 five_prime_UTR 917906 918040 917906 ID=Msa0932660-mRNA-1:five_prime_utr;Parent=Msa0932660-mRNA-1
chr6_3 CDS 918041 918322 918041 ID=Msa0932660-mRNA-1:cds;Parent=Msa0932660-mRNA-1
chr6_3 CDS 921174 921452 921174 ID=Msa0932660-mRNA-1:cds;Parent=Msa0932660-mRNA-1
chr6_3 CDS 922817 923938 922817 ID=Msa0932660-mRNA-1:cds;Parent=Msa0932660-mRNA-1
chr6_3 three_prime_UTR 923939 924318 923939 ID=Msa0932660-mRNA-1:three_prime_utr;Parent=Msa0932660-mRNA-1
Gene Sequence

>Msa0932660

ATGAATACGACGTCGTTTATGGACAAACAGATAATGGATCTAAGCCATGGAGGATCATCATCTTCCAACAACAACGATTTCATCGACCTTAACAAGAAGAACCGTGAACAACACGAAGAAGAAGATGAAGAAGATGATGATTCGTTAATTCATCACAAAAATGGCGGTGGAATCAAAACCGATGATATTGTTCCTAGCTACGATTTTCAACCCATTCGTTCACTTCCTGATAATTCTTCTTCATCGTTTTCAAGGCCTTGGAATTCTGATTCCAATTCCAAAAACTATGGTTCTTTGGATTCTTTTGAACCTGCAAAGGTGACTGTAGAAAAGAACCAGAGCGCTGTTGATGCTTCAATTTTGTTAGAGATTGATCGAACAATGAAGAAACATATGGACAATTTGCATCATGTTCTAGAAGGTGTTAGTGCGCGGTTAACCCAAGTAGAAACCAGAACTCACCATCTTGAGAGTTCTATGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGAATCACTGATGGGAAATTGAGGCTGTTGGAGAATATTCTTTCTGAGGTGCAAACAGGGGTGCATGATATCAAGGACAAACAAGATATAATGCAAGCTCAGCTACAACTGGCAAAACTACAAGTGTCTAAGACGACAGAGCAACAATCAGAAACTCAAACCCGTGCCACATCAGATCCTGTGCAGCAAACTTCATCTGTATCTGCATCTGCTCCCCTGCAAACTCAACAATATCTTCCTTCGTCTTATAATCTTCCACAATCAATCCCCGTGGTTTCTCCCCCTAATGCACCTCCTCAACCTCCCCCTCAACAAAGTTTGCCACCTCCAGCTCAACTTCCAAATCAATACTCTCAGATCCCAACCCCAACTGTTCCTCAGAGAGATCCATACTTGCCATCACCTGTTCAATCTCAGGAAATTCCAAATCAGCAATACCAACTGCCTTTAACTCAGCAGCCACATCCTCAACCAGGGGCACCTCCGCATCAACAATATCAGCAGACCCCTCATCATCAATACTCTCAGCCACCGCCTCATCTACCTCCACAACAGCCACCGCATTCATCCGGAAATCCACCTCAACTGCAATCTTCCATGGGTCACCATCTAGAGGAACCACCTTATGTTCCTTCTCAGACTTATCCTCCCAATCTCCGCCAGCCACCATCTCAGCCACCCAGCGGACCTCCTCAACCTTCCCAACAGTTCTATGGAACACCGCCACAAGGATATGAACCACCATCGAGTAGACCTGGTGCGAGTTACTCTTCTGGATATGGTACATTATCTGGGCCTACTGAGCCATATCGATATGGCGGACCACCTCAATATGGTAGTAAACAGTCACAACTACCTAACGCTTCGGCGGCTTCCAGTGGTGGAAACGGTTACCCACAGCTCCCTACTGCCCGCGTACTCCCACAAGCAATACCTACTGCATCTGCAGTAAGTGGTGGTTCAGGTTCTCCTGGAGCTGGTAACAGGGTTCCTGTTGATGATATAGTCGACAAAGTTGCCACTATGGGATTCCCTAGAGATCATGTGAGGGAAACGGTTCGGAAGCTGACAGAGAATGGTCAAGCAGTTGACCTAAATACAGTGCTGGATAAGCTTATGAATGAAGGTGGTGGTGATATGCAGCAACAGAGAGGTTGGTTTGGTAGGTAA
Protein sequence

>Msa0932660

MNTTSFMDKQIMDLSHGGSSSSNNNDFIDLNKKNREQHEEEDEEDDDSLIHHKNGGGIKTDDIVPSYDFQPIRSLPDNSSSSFSRPWNSDSNSKNYGSLDSFEPAKVTVEKNQSAVDASILLEIDRTMKKHMDNLHHVLEGVSARLTQVETRTHHLESSMDDLKVSVGNNHGITDGKLRLLENILSEVQTGVHDIKDKQDIMQAQLQLAKLQVSKTTEQQSETQTRATSDPVQQTSSVSASAPLQTQQYLPSSYNLPQSIPVVSPPNAPPQPPPQQSLPPPAQLPNQYSQIPTPTVPQRDPYLPSPVQSQEIPNQQYQLPLTQQPHPQPGAPPHQQYQQTPHHQYSQPPPHLPPQQPPHSSGNPPQLQSSMGHHLEEPPYVPSQTYPPNLRQPPSQPPSGPPQPSQQFYGTPPQGYEPPSSRPGASYSSGYGTLSGPTEPYRYGGPPQYGSKQSQLPNASAASSGGNGYPQLPTARVLPQAIPTASAVSGGSGSPGAGNRVPVDDIVDKVATMGFPRDHVRETVRKLTENGQAVDLNTVLDKLMNEGGGDMQQQRGWFGR*