Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654760 | XP_003608490.1 | 96.565 | 262 | 9 | 0 | 44 | 305 | 1 | 262 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654760 | sp|Q9ASX9|BH144_ARATH | 41.126 | 231 | 115 | 7 | 92 | 304 | 18 | 245 | 3.25e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654760 | G7JDY6 | 96.565 | 262 | 9 | 0 | 44 | 305 | 1 | 262 | 0.0 | 530 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa0654760 | 0.826103 | 3.259520e-54 | -8.615850e-47 |
| Msa0023000 | Msa0654760 | -0.810866 | 9.315893e-51 | -8.615850e-47 |
| Msa0027260 | Msa0654760 | -0.805163 | 1.524031e-49 | -8.615850e-47 |
| Msa0030380 | Msa0654760 | -0.867849 | 1.010092e-65 | -8.615850e-47 |
| Msa0032260 | Msa0654760 | -0.819465 | 1.145049e-52 | -8.615850e-47 |
| Msa0032580 | Msa0654760 | -0.808393 | 3.166144e-50 | -8.615850e-47 |
| Msa0049650 | Msa0654760 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0076000 | Msa0654760 | -0.823472 | 1.359789e-53 | -8.615850e-47 |
| Msa0094920 | Msa0654760 | -0.808142 | 3.581588e-50 | -8.615850e-47 |
| Msa0094950 | Msa0654760 | -0.803204 | 3.897860e-49 | -8.615850e-47 |
| Msa0095380 | Msa0654760 | -0.801219 | 9.982663e-49 | -8.615850e-47 |
| Msa0098370 | Msa0654760 | -0.815606 | 8.480534e-52 | -8.615850e-47 |
| Msa0100740 | Msa0654760 | -0.809675 | 1.683193e-50 | -8.615850e-47 |
| Msa0107250 | Msa0654760 | -0.834704 | 2.570190e-56 | -8.615850e-47 |
| Msa0107280 | Msa0654760 | -0.826863 | 2.148293e-54 | -8.615850e-47 |
| Msa0607340 | Msa0654760 | 0.847829 | 9.029093e-60 | -8.615850e-47 |
| Msa0618010 | Msa0654760 | -0.811060 | 8.457018e-51 | -8.615850e-47 |
| Msa0638130 | Msa0654760 | 0.810089 | 1.370781e-50 | -8.615850e-47 |
| Msa0639310 | Msa0654760 | -0.823619 | 1.256201e-53 | -8.615850e-47 |
| Msa0647450 | Msa0654760 | 0.839548 | 1.483879e-57 | -8.615850e-47 |
| Msa0654760 | Msa0655660 | 0.828846 | 7.163533e-55 | -8.615850e-47 |
| Msa0654760 | Msa0661190 | 0.817068 | 3.994926e-52 | -8.615850e-47 |
| Msa0654760 | Msa0663900 | -0.816199 | 6.253749e-52 | -8.615850e-47 |
| Msa0654760 | Msa0669850 | -0.819145 | 1.354642e-52 | -8.615850e-47 |
| Msa0654760 | Msa0682780 | -0.844190 | 8.815279e-59 | -8.615850e-47 |
| Msa0654760 | Msa0682900 | -0.808210 | 3.463229e-50 | -8.615850e-47 |
| Msa0654760 | Msa0684180 | 0.837877 | 4.009566e-57 | -8.615850e-47 |
| Msa0654760 | Msa0687630 | -0.817491 | 3.208448e-52 | -8.615850e-47 |
| Msa0654760 | Msa0691900 | -0.803716 | 3.052349e-49 | -8.615850e-47 |
| Msa0654760 | Msa0692940 | -0.802387 | 5.746311e-49 | -8.615850e-47 |
| Msa0654760 | Msa0697670 | -0.805443 | 1.331745e-49 | -8.615850e-47 |
| Msa0654760 | Msa0698060 | -0.802874 | 4.561463e-49 | -8.615850e-47 |
| Msa0654760 | Msa0703230 | -0.826918 | 2.084286e-54 | -8.615850e-47 |
| Msa0654760 | Msa0705600 | -0.800982 | 1.116381e-48 | -8.615850e-47 |
| Msa0654760 | Msa0709500 | -0.825563 | 4.379104e-54 | -8.615850e-47 |
| Msa0654760 | Msa0738630 | 0.814857 | 1.244091e-51 | -8.615850e-47 |
| Msa0654760 | Msa0757010 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0654760 | Msa0761940 | -0.816704 | 4.822022e-52 | -8.615850e-47 |
| Msa0654760 | Msa0776220 | -0.801848 | 7.417975e-49 | -8.615850e-47 |
| Msa0654760 | Msa0783760 | 0.825725 | 4.007614e-54 | -8.615850e-47 |
| Msa0654760 | Msa0790390 | 0.829764 | 4.288040e-55 | -8.615850e-47 |
| Msa0654760 | Msa0790850 | -0.822599 | 2.172930e-53 | -8.615850e-47 |
| Msa0654760 | Msa0797120 | -0.802690 | 4.977020e-49 | -8.615850e-47 |
| Msa0654760 | Msa0798000 | 0.840551 | 8.120595e-58 | -8.615850e-47 |
| Msa0654760 | Msa0801110 | -0.802126 | 6.503248e-49 | -8.615850e-47 |
| Msa0654760 | Msa0802230 | 0.807872 | 4.087296e-50 | -8.615850e-47 |
| Msa0654760 | Msa0808270 | -0.803270 | 3.775945e-49 | -8.615850e-47 |
| Msa0654760 | Msa0813670 | -0.809587 | 1.758090e-50 | -8.615850e-47 |
| Msa0654760 | Msa0813720 | -0.851857 | 6.751364e-61 | -8.615850e-47 |
| Msa0654760 | Msa0818980 | 0.819613 | 1.059383e-52 | -8.615850e-47 |
| Msa0654760 | Msa0819030 | 0.834522 | 2.854326e-56 | -8.615850e-47 |
| Msa0654760 | Msa0831870 | -0.825238 | 5.227829e-54 | -8.615850e-47 |
| Msa0654760 | Msa0836660 | 0.849191 | 3.787615e-60 | -8.615850e-47 |
| Msa0654760 | Msa0842830 | -0.819042 | 1.429467e-52 | -8.615850e-47 |
| Msa0654760 | Msa0860900 | 0.800294 | 1.541722e-48 | -8.615850e-47 |
| Msa0654760 | Msa0861040 | 0.807541 | 4.806251e-50 | -8.615850e-47 |
| Msa0654760 | Msa0867050 | 0.831203 | 1.907369e-55 | -8.615850e-47 |
| Msa0654760 | Msa0874500 | -0.809313 | 2.012960e-50 | -8.615850e-47 |
| Msa0654760 | Msa0899240 | 0.827153 | 1.830434e-54 | -8.615850e-47 |
| Msa0654760 | Msa0902760 | -0.806218 | 9.152185e-50 | -8.615850e-47 |
| Msa0654760 | Msa0926460 | -0.814770 | 1.300720e-51 | -8.615850e-47 |
| Msa0654760 | Msa0965860 | -0.809310 | 2.015355e-50 | -8.615850e-47 |
| Msa0654760 | Msa0967650 | 0.804410 | 2.189265e-49 | -8.615850e-47 |
| Msa0654760 | Msa0968590 | -0.810176 | 1.312925e-50 | -8.615850e-47 |
| Msa0654760 | Msa0974810 | -0.851457 | 8.763454e-61 | -8.615850e-47 |
| Msa0654760 | Msa0993330 | -0.809665 | 1.690934e-50 | -8.615850e-47 |
| Msa0654760 | Msa1003310 | -0.800740 | 1.250728e-48 | -8.615850e-47 |
| Msa0654760 | Msa1006840 | -0.802500 | 5.448685e-49 | -8.615850e-47 |
| Msa0654760 | Msa1007610 | 0.804274 | 2.336872e-49 | -8.615850e-47 |
| Msa0654760 | Msa1013400 | -0.811585 | 6.505652e-51 | -8.615850e-47 |
| Msa0654760 | Msa1019260 | -0.802550 | 5.319930e-49 | -8.615850e-47 |
| Msa0654760 | Msa1040400 | -0.832214 | 1.073904e-55 | -8.615850e-47 |
| Msa0654760 | Msa1069660 | 0.821322 | 4.294022e-53 | -8.615850e-47 |
| Msa0654760 | Msa1072460 | 0.830467 | 2.889117e-55 | -8.615850e-47 |
| Msa0654760 | Msa1081150 | -0.840685 | 7.493475e-58 | -8.615850e-47 |
| Msa0654760 | Msa1082700 | -0.809882 | 1.518598e-50 | -8.615850e-47 |
| Msa0654760 | Msa1087710 | -0.804780 | 1.833098e-49 | -8.615850e-47 |
| Msa0654760 | Msa1089840 | -0.839927 | 1.182317e-57 | -8.615850e-47 |
| Msa0654760 | Msa1093530 | -0.806386 | 8.437805e-50 | -8.615850e-47 |
| Msa0654760 | Msa1104140 | -0.824444 | 8.044055e-54 | -8.615850e-47 |
| Msa0654760 | Msa1104210 | -0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0654760 | Msa1125760 | -0.831927 | 1.264977e-55 | -8.615850e-47 |
| Msa0654760 | Msa1126510 | -0.810372 | 1.191217e-50 | -8.615850e-47 |
| Msa0654760 | Msa1134110 | -0.806837 | 6.775226e-50 | -8.615850e-47 |
| Msa0654760 | Msa1138870 | -0.800746 | 1.246957e-48 | -8.615850e-47 |
| Msa0654760 | Msa1147900 | -0.801542 | 8.571918e-49 | -8.615850e-47 |
| Msa0654760 | Msa1157420 | 0.820739 | 5.849065e-53 | -8.615850e-47 |
| Msa0654760 | Msa1165870 | -0.821286 | 4.377825e-53 | -8.615850e-47 |
| Msa0654760 | Msa1166010 | -0.850548 | 1.581648e-60 | -8.615850e-47 |
| Msa0654760 | Msa1166860 | -0.820694 | 5.989721e-53 | -8.615850e-47 |
| Msa0654760 | Msa1171360 | -0.825864 | 3.715266e-54 | -8.615850e-47 |
| Msa0654760 | Msa1181850 | -0.813549 | 2.420020e-51 | -8.615850e-47 |
| Msa0654760 | Msa1181860 | -0.805117 | 1.558643e-49 | -8.615850e-47 |
| Msa0654760 | Msa1193950 | 0.804716 | 1.890333e-49 | -8.615850e-47 |
| Msa0654760 | Msa1194030 | -0.808459 | 3.065882e-50 | -8.615850e-47 |
| Msa0654760 | Msa1201430 | 0.805180 | 1.512051e-49 | -8.615850e-47 |
| Msa0654760 | Msa1204250 | -0.831098 | 2.023985e-55 | -8.615850e-47 |
| Msa0654760 | Msa1207270 | -0.816992 | 4.155418e-52 | -8.615850e-47 |
| Msa0654760 | Msa1218600 | -0.810947 | 8.947560e-51 | -8.615850e-47 |
| Msa0654760 | Msa1237940 | -0.827055 | 1.932500e-54 | -8.615850e-47 |
| Msa0654760 | Msa1253930 | 0.803696 | 3.081888e-49 | -8.615850e-47 |
| Msa0654760 | Msa1255040 | 0.833913 | 4.058218e-56 | -8.615850e-47 |
| Msa0654760 | Msa1269300 | -0.844591 | 6.878121e-59 | -8.615850e-47 |
| Msa0654760 | Msa1295490 | 0.829502 | 4.965739e-55 | -8.615850e-47 |
| Msa0654760 | Msa1307660 | 0.828951 | 6.758023e-55 | -8.615850e-47 |
| Msa0654760 | Msa1308080 | 0.803240 | 3.831058e-49 | -8.615850e-47 |
| Msa0654760 | Msa1316780 | -0.817765 | 2.782730e-52 | -8.615850e-47 |
| Msa0654760 | Msa1316830 | -0.822874 | 1.875899e-53 | -8.615850e-47 |
| Msa0654760 | Msa1332040 | 0.804030 | 2.627118e-49 | -8.615850e-47 |
| Msa0654760 | Msa1333110 | -0.831806 | 1.354800e-55 | -8.615850e-47 |
| Msa0654760 | Msa1358610 | 0.832034 | 1.190105e-55 | -8.615850e-47 |
| Msa0654760 | Msa1363330 | -0.814142 | 1.791048e-51 | -8.615850e-47 |
| Msa0654760 | Msa1365150 | -0.802615 | 5.156791e-49 | -8.615850e-47 |
| Msa0654760 | Msa1365700 | 0.819879 | 9.211804e-53 | -8.615850e-47 |
| Msa0654760 | Msa1368120 | -0.825953 | 3.538127e-54 | -8.615850e-47 |
| Msa0654760 | Msa1379760 | -0.806385 | 8.440467e-50 | -8.615850e-47 |
| Msa0654760 | Msa1385770 | -0.817332 | 3.483607e-52 | -8.615850e-47 |
| Msa0654760 | Msa1386600 | -0.815094 | 1.102353e-51 | -8.615850e-47 |
| Msa0654760 | Msa1387420 | -0.814350 | 1.611409e-51 | -8.615850e-47 |
| Msa0654760 | Msa1394290 | -0.802033 | 6.798080e-49 | -8.615850e-47 |
| Msa0654760 | Msa1403580 | 0.841742 | 3.951842e-58 | -8.615850e-47 |
| Msa0654760 | Msa1403930 | 0.845824 | 3.192115e-59 | -8.615850e-47 |
| Msa0654760 | Msa1404010 | -0.802887 | 4.531770e-49 | -8.615850e-47 |
| Msa0654760 | Msa1404190 | -0.819471 | 1.141626e-52 | -8.615850e-47 |
| Msa0654760 | Msa1409240 | -0.815108 | 1.094572e-51 | -8.615850e-47 |
| Msa0654760 | Msa1410430 | 0.832662 | 8.316873e-56 | -8.615850e-47 |
| Msa0654760 | Msa1419800 | 0.851660 | 7.679842e-61 | -8.615850e-47 |
| Msa0654760 | Msa1426030 | -0.809760 | 1.613327e-50 | -8.615850e-47 |
| Msa0654760 | Msa1434140 | -0.811811 | 5.809277e-51 | -8.615850e-47 |
| Msa0654760 | Msa1443290 | 0.826982 | 2.011567e-54 | -8.615850e-47 |
| Msa0654760 | Msa1444310 | -0.800704 | 1.272079e-48 | -8.615850e-47 |
| Msa0654760 | Msa1448690 | -0.804444 | 2.153587e-49 | -8.615850e-47 |
| Msa0654760 | Msa1450280 | -0.811182 | 7.955340e-51 | -8.615850e-47 |
| Msa0654760 | Msa1453780 | 0.829991 | 3.775932e-55 | -8.615850e-47 |
| Msa0654760 | Msa1460470 | -0.806070 | 9.831703e-50 | -8.615850e-47 |
| Msa0654760 | Msa1461280 | -0.819750 | 9.857258e-53 | -8.615850e-47 |
| Msa0121590 | Msa0654760 | -0.810939 | 8.983989e-51 | -8.615850e-47 |
| Msa0128660 | Msa0654760 | 0.815758 | 7.846239e-52 | -8.615850e-47 |
| Msa0128860 | Msa0654760 | -0.801878 | 7.313531e-49 | -8.615850e-47 |
| Msa0143080 | Msa0654760 | -0.813620 | 2.334035e-51 | -8.615850e-47 |
| Msa0143140 | Msa0654760 | 0.840194 | 1.007136e-57 | -8.615850e-47 |
| Msa0156650 | Msa0654760 | 0.803115 | 4.065556e-49 | -8.615850e-47 |
| Msa0162770 | Msa0654760 | 0.823453 | 1.373882e-53 | -8.615850e-47 |
| Msa0168640 | Msa0654760 | 0.806327 | 8.681159e-50 | -8.615850e-47 |
| Msa0172970 | Msa0654760 | -0.805663 | 1.197606e-49 | -8.615850e-47 |
| Msa0173740 | Msa0654760 | -0.868163 | 8.005620e-66 | -8.615850e-47 |
| Msa0173820 | Msa0654760 | -0.865306 | 6.499555e-65 | -8.615850e-47 |
| Msa0173830 | Msa0654760 | -0.845127 | 4.927956e-59 | -8.615850e-47 |
| Msa0174730 | Msa0654760 | -0.802137 | 6.471133e-49 | -8.615850e-47 |
| Msa0183460 | Msa0654760 | -0.817109 | 3.909924e-52 | -8.615850e-47 |
| Msa0186890 | Msa0654760 | -0.824862 | 6.414508e-54 | -8.615850e-47 |
| Msa0187930 | Msa0654760 | -0.816804 | 4.577524e-52 | -8.615850e-47 |
| Msa0188680 | Msa0654760 | 0.821326 | 4.285412e-53 | -8.615850e-47 |
| Msa0194480 | Msa0654760 | -0.835166 | 1.965483e-56 | -8.615850e-47 |
| Msa0194540 | Msa0654760 | -0.821372 | 4.181318e-53 | -8.615850e-47 |
| Msa0199690 | Msa0654760 | -0.830015 | 3.726310e-55 | -8.615850e-47 |
| Msa0231880 | Msa0654760 | -0.838913 | 2.167857e-57 | -8.615850e-47 |
| Msa0231980 | Msa0654760 | -0.819339 | 1.223243e-52 | -8.615850e-47 |
| Msa0232050 | Msa0654760 | -0.827862 | 1.237411e-54 | -8.615850e-47 |
| Msa0236270 | Msa0654760 | -0.814385 | 1.582744e-51 | -8.615850e-47 |
| Msa0236980 | Msa0654760 | -0.818275 | 2.133935e-52 | -8.615850e-47 |
| Msa0238070 | Msa0654760 | 0.808366 | 3.208450e-50 | -8.615850e-47 |
| Msa0238250 | Msa0654760 | 0.801348 | 9.392700e-49 | -8.615850e-47 |
| Msa0366890 | Msa0654760 | -0.804809 | 1.807160e-49 | -8.615850e-47 |
| Msa0376450 | Msa0654760 | 0.805861 | 1.088049e-49 | -8.615850e-47 |
| Msa0376690 | Msa0654760 | -0.810238 | 1.273310e-50 | -8.615850e-47 |
| Msa0385580 | Msa0654760 | -0.816173 | 6.339061e-52 | -8.615850e-47 |
| Msa0398950 | Msa0654760 | -0.806706 | 7.220897e-50 | -8.615850e-47 |
| Msa0425940 | Msa0654760 | -0.801258 | 9.802899e-49 | -8.615850e-47 |
| Msa0427200 | Msa0654760 | -0.807975 | 3.886400e-50 | -8.615850e-47 |
| Msa0429290 | Msa0654760 | -0.804597 | 2.001846e-49 | -8.615850e-47 |
| Msa0458060 | Msa0654760 | -0.813217 | 2.861564e-51 | -8.615850e-47 |
| Msa0465790 | Msa0654760 | -0.821794 | 3.341556e-53 | -8.615850e-47 |
| Msa0471440 | Msa0654760 | -0.801327 | 9.486641e-49 | -8.615850e-47 |
| Msa0471590 | Msa0654760 | -0.817925 | 2.560196e-52 | -8.615850e-47 |
| Msa0471720 | Msa0654760 | 0.803210 | 3.886648e-49 | -8.615850e-47 |
| Msa0244270 | Msa0654760 | -0.804773 | 1.839221e-49 | -8.615850e-47 |
| Msa0244780 | Msa0654760 | -0.806096 | 9.712130e-50 | -8.615850e-47 |
| Msa0259860 | Msa0654760 | 0.809034 | 2.310222e-50 | -8.615850e-47 |
| Msa0260210 | Msa0654760 | -0.803313 | 3.699936e-49 | -8.615850e-47 |
| Msa0260240 | Msa0654760 | -0.808695 | 2.729739e-50 | -8.615850e-47 |
| Msa0260280 | Msa0654760 | -0.805992 | 1.021197e-49 | -8.615850e-47 |
| Msa0262310 | Msa0654760 | -0.845460 | 4.006994e-59 | -8.615850e-47 |
| Msa0264570 | Msa0654760 | -0.816789 | 4.613177e-52 | -8.615850e-47 |
| Msa0268130 | Msa0654760 | -0.825163 | 5.445489e-54 | -8.615850e-47 |
| Msa0270220 | Msa0654760 | 0.834204 | 3.431393e-56 | -8.615850e-47 |
| Msa0279790 | Msa0654760 | -0.810846 | 9.409129e-51 | -8.615850e-47 |
| Msa0280430 | Msa0654760 | -0.803600 | 3.226098e-49 | -8.615850e-47 |
| Msa0294560 | Msa0654760 | 0.803137 | 4.024304e-49 | -8.615850e-47 |
| Msa0298990 | Msa0654760 | -0.815348 | 9.680448e-52 | -8.615850e-47 |
| Msa0304260 | Msa0654760 | -0.804039 | 2.616052e-49 | -8.615850e-47 |
| Msa0304290 | Msa0654760 | -0.807656 | 4.544365e-50 | -8.615850e-47 |
| Msa0304330 | Msa0654760 | -0.816730 | 4.756379e-52 | -8.615850e-47 |
| Msa0304590 | Msa0654760 | -0.808396 | 3.161172e-50 | -8.615850e-47 |
| Msa0304660 | Msa0654760 | -0.803428 | 3.503092e-49 | -8.615850e-47 |
| Msa0307830 | Msa0654760 | 0.825743 | 3.969202e-54 | -8.615850e-47 |
| Msa0337650 | Msa0654760 | -0.844211 | 8.701254e-59 | -8.615850e-47 |
| Msa0504020 | Msa0654760 | -0.812930 | 3.309281e-51 | -8.615850e-47 |
| Msa0508590 | Msa0654760 | -0.801115 | 1.048263e-48 | -8.615850e-47 |
| Msa0526540 | Msa0654760 | -0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0541860 | Msa0654760 | -0.825526 | 4.468710e-54 | -8.615850e-47 |
| Msa0547360 | Msa0654760 | -0.801352 | 9.374867e-49 | -8.615850e-47 |
| Msa0552810 | Msa0654760 | -0.810586 | 1.070794e-50 | -8.615850e-47 |
| Msa0553220 | Msa0654760 | 0.865845 | 4.393338e-65 | -8.615850e-47 |
| Msa0561540 | Msa0654760 | 0.982597 | 1.672906e-155 | -8.615850e-47 |
| Msa0562300 | Msa0654760 | 0.826146 | 3.183980e-54 | -8.615850e-47 |
| Msa0576940 | Msa0654760 | -0.802615 | 5.157034e-49 | -8.615850e-47 |
| Msa0589190 | Msa0654760 | -0.807827 | 4.179307e-50 | -8.615850e-47 |
| Msa0590680 | Msa0654760 | -0.811081 | 8.369697e-51 | -8.615850e-47 |
| Msa0591060 | Msa0654760 | -0.804300 | 2.308456e-49 | -8.615850e-47 |
| Msa0591770 | Msa0654760 | -0.813175 | 2.924162e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654760 | MtrunA17_Chr4g0052111 | 96.565 | 262 | 9 | 0 | 44 | 305 | 1 | 262 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654760 | AT1G29950.2 | 41.126 | 231 | 115 | 7 | 92 | 304 | 18 | 245 | 3.31e-38 | 135 |
| Msa0654760 | AT1G29950.1 | 41.126 | 231 | 115 | 7 | 92 | 304 | 18 | 245 | 3.31e-38 | 135 |
Find 101 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAAGACAATGAAATTCTT+AGG | 0.183604 | 4_3:-63070446 | None:intergenic |
| ACACTTTCAGGTCAGAGTTT+TGG | 0.217965 | 4_3:+63068831 | Msa0654760:intron |
| GTTTGTCATTAAAGATATTC+TGG | 0.235805 | 4_3:+63068854 | Msa0654760:five_prime_UTR |
| AATGGACACCGTTACTGTTT+TGG | 0.237723 | 4_3:+63070901 | Msa0654760:CDS |
| CCTTGATTTCGTGCAGTAAC+TGG | 0.271176 | 4_3:-63070744 | None:intergenic |
| GATTAGATCGACATTGTTCT+TGG | 0.294094 | 4_3:-63068105 | None:intergenic |
| GCTCCACATGGTTCTGCCTT+TGG | 0.304746 | 4_3:+63070314 | Msa0654760:CDS |
| GCTCCACATGCTTCTGCTTT+CGG | 0.312643 | 4_3:+63070278 | Msa0654760:CDS |
| AAACGCAAACAATGCTGATT+TGG | 0.336184 | 4_3:-63070150 | None:intergenic |
| TTAAACTTGTAGGTCGTTGC+AGG | 0.347647 | 4_3:-63070503 | None:intergenic |
| TCTTGCTGCTGCAGGTGATT+AGG | 0.358521 | 4_3:+63069270 | Msa0654760:intron |
| AAAGGACGTACTGCCTTTCC+CGG | 0.382439 | 4_3:-63070224 | None:intergenic |
| AAACACAATTACTCTTGAAA+AGG | 0.409317 | 4_3:-63068908 | None:intergenic |
| TCAATTGATGTTGGTTTGCC+AGG | 0.415900 | 4_3:+63069407 | Msa0654760:CDS |
| GATTTGTGAGGAAGAGGAAA+AGG | 0.423075 | 4_3:-63068293 | None:intergenic |
| ATCAAACAGATCAACAAAAC+AGG | 0.423904 | 4_3:+63070468 | Msa0654760:CDS |
| TGAAGATGGATCAGAGAAGA+AGG | 0.425988 | 4_3:-63068256 | None:intergenic |
| AAACAGTAACGGTGTCCATT+TGG | 0.430407 | 4_3:-63070898 | None:intergenic |
| GAAGGATAAAATTAATCAAA+TGG | 0.430828 | 4_3:+63070571 | Msa0654760:CDS |
| ACTATCATACCCGCGATAAA+CGG | 0.433083 | 4_3:+63068072 | Msa0654760:five_prime_UTR |
| TCCATTTGGTTGCCTCCACC+AGG | 0.433945 | 4_3:-63070884 | None:intergenic |
| AGAATGTTCATTGCCAAAGT+TGG | 0.444081 | 4_3:+63069348 | Msa0654760:exon |
| CAAGAGTAATTGTGTTTGCT+TGG | 0.450947 | 4_3:+63068914 | Msa0654760:five_prime_UTR |
| GGGAAAGGCAGTACGTCCTT+TGG | 0.456169 | 4_3:+63070226 | Msa0654760:CDS |
| TCATCCGCACATAACTCGTC+AGG | 0.457509 | 4_3:+63070782 | Msa0654760:CDS |
| GAATGTTCATTGCCAAAGTT+GGG | 0.458415 | 4_3:+63069349 | Msa0654760:exon |
| CAAAGACAATGAAATTCTTA+GGG | 0.464787 | 4_3:-63070445 | None:intergenic |
| TCCTCTTCCTCACAAATCCT+AGG | 0.466152 | 4_3:+63068298 | Msa0654760:five_prime_UTR |
| AGAAATATCGTGCCTGGTGG+AGG | 0.468154 | 4_3:+63070872 | Msa0654760:CDS |
| TGCAAGTTAAACCTTTCAAA+TGG | 0.471021 | 4_3:-63070407 | None:intergenic |
| TGAGATCAATCAAGATGCCT+TGG | 0.471766 | 4_3:+63068880 | Msa0654760:five_prime_UTR |
| TGCATACAGTCAATTGATGT+TGG | 0.473587 | 4_3:+63069398 | Msa0654760:CDS |
| ACCTAGGATTTGTGAGGAAG+AGG | 0.475710 | 4_3:-63068299 | None:intergenic |
| CCAGTTACTGCACGAAATCA+AGG | 0.478607 | 4_3:+63070744 | Msa0654760:CDS |
| GCCGGGACTGTTAAACTTGT+AGG | 0.478819 | 4_3:-63070513 | None:intergenic |
| GAGTAATTGTGTTTGCTTGG+TGG | 0.478991 | 4_3:+63068917 | Msa0654760:five_prime_UTR |
| GAAGAGGAAAAGGGTGTGAA+AGG | 0.482672 | 4_3:-63068283 | None:intergenic |
| TAAAATTAATCAAATGGAAA+CGG | 0.485866 | 4_3:+63070577 | Msa0654760:CDS |
| ACCTACAAGTTTAACAGTCC+CGG | 0.485914 | 4_3:+63070512 | Msa0654760:CDS |
| AACACAATTACTCTTGAAAA+GGG | 0.487308 | 4_3:-63068907 | None:intergenic |
| AAGGTTGAAGTCGAGCAATT+CGG | 0.492781 | 4_3:+63070953 | Msa0654760:CDS |
| GCCTGGTGGAGGCAACCAAA+TGG | 0.494134 | 4_3:+63070883 | Msa0654760:CDS |
| ATTTGTGAGGAAGAGGAAAA+GGG | 0.496480 | 4_3:-63068292 | None:intergenic |
| CTTCTAGTTCATCCGAGTCT+AGG | 0.499152 | 4_3:-63070652 | None:intergenic |
| ACTCGCACTTGGAGGTAAAA+CGG | 0.500512 | 4_3:-63070375 | None:intergenic |
| TGCGTTTAGTTTAGTGAGAG+TGG | 0.504635 | 4_3:+63070166 | Msa0654760:CDS |
| GTCAGATAACACCATTTGAA+AGG | 0.508642 | 4_3:+63070396 | Msa0654760:CDS |
| GATATGAAGGCGTGATGGGA+TGG | 0.510194 | 4_3:-63068155 | None:intergenic |
| TTCAAGATATGAAGGCGTGA+TGG | 0.518579 | 4_3:-63068160 | None:intergenic |
| GAAGATGGATCAGAGAAGAA+GGG | 0.521999 | 4_3:-63068255 | None:intergenic |
| GGTGTTATCTGACTCGCACT+TGG | 0.524930 | 4_3:-63070386 | None:intergenic |
| CAGTGAAAAGAAACAACACT+TGG | 0.526852 | 4_3:+63070823 | Msa0654760:CDS |
| TCAAGATATGAAGGCGTGAT+GGG | 0.526920 | 4_3:-63068159 | None:intergenic |
| AGTAGCATGAGTGTTGAAGC+CGG | 0.530258 | 4_3:-63070531 | None:intergenic |
| CATAACTCGTCAGGGACAAA+GGG | 0.532535 | 4_3:+63070791 | Msa0654760:CDS |
| GAAGTCGAGCAATTCGGAGT+TGG | 0.534683 | 4_3:+63070959 | Msa0654760:CDS |
| CGATTAGAGCACGCGTGAAG+AGG | 0.535117 | 4_3:-63068042 | None:intergenic |
| TGGAGGTAAAACGGCATCAA+AGG | 0.535639 | 4_3:-63070366 | None:intergenic |
| ACATAACTCGTCAGGGACAA+AGG | 0.541406 | 4_3:+63070790 | Msa0654760:CDS |
| AACAACACTTGGAGATGAAG+AGG | 0.542117 | 4_3:+63070834 | Msa0654760:CDS |
| GTGTGAAAGGAAATTGAAGA+TGG | 0.542423 | 4_3:-63068270 | None:intergenic |
| GTTATCTGACTCGCACTTGG+AGG | 0.545030 | 4_3:-63070383 | None:intergenic |
| ATATGAAGGCGTGATGGGAT+GGG | 0.555384 | 4_3:-63068154 | None:intergenic |
| TTCTTAGGGCAAACCTCAGA+GGG | 0.559386 | 4_3:-63070431 | None:intergenic |
| AATGCACTTCCGTTTATCGC+GGG | 0.563337 | 4_3:-63068081 | None:intergenic |
| TTCTGTAATTTAATTAGCTG+AGG | 0.564309 | 4_3:+63068955 | Msa0654760:five_prime_UTR |
| ACATGGATGATCTCAGCCGT+TGG | 0.568907 | 4_3:-63068127 | None:intergenic |
| ATATTGAGAAATATCGTGCC+TGG | 0.572011 | 4_3:+63070866 | Msa0654760:CDS |
| AAAATACCTCAAGTCTCTCA+AGG | 0.572321 | 4_3:+63070934 | Msa0654760:CDS |
| GGGTACATTAAAATGAGTGT+TGG | 0.573672 | 4_3:+63069369 | Msa0654760:CDS |
| GTAGCATGAGTGTTGAAGCC+GGG | 0.574493 | 4_3:-63070530 | None:intergenic |
| TTTAGTTTAGTGAGAGTGGA+CGG | 0.582673 | 4_3:+63070170 | Msa0654760:CDS |
| TGCATTGTTGAGCCTAGACT+CGG | 0.583179 | 4_3:+63070640 | Msa0654760:CDS |
| CCTTTGGCAGATGAAGCCAT+TGG | 0.588109 | 4_3:+63070242 | Msa0654760:CDS |
| TGCAGGTGATTAGGCTGCAG+AGG | 0.595624 | 4_3:+63069279 | Msa0654760:intron |
| AAGGACGTACTGCCTTTCCC+GGG | 0.597633 | 4_3:-63070223 | None:intergenic |
| AGCATTCATATAAGTACCAA+AGG | 0.603461 | 4_3:-63070330 | None:intergenic |
| AGCATTCATATAAGTGCCAA+TGG | 0.605224 | 4_3:-63070258 | None:intergenic |
| ACTTGTAGGTCGTTGCAGGA+TGG | 0.612223 | 4_3:-63070499 | None:intergenic |
| GTACCGAAAGCAGAAGCATG+TGG | 0.618840 | 4_3:-63070281 | None:intergenic |
| GCACGAAATCAAGGAAGAAG+AGG | 0.621640 | 4_3:+63070753 | Msa0654760:CDS |
| CTTCAACCTTGAGAGACTTG+AGG | 0.621750 | 4_3:-63070940 | None:intergenic |
| GTTTAACTTGCAGCCCTCTG+AGG | 0.624822 | 4_3:+63070418 | Msa0654760:CDS |
| GTAACTGGAGCAAGTATCAG+AGG | 0.624869 | 4_3:-63070729 | None:intergenic |
| GTGATGGGATGGGTCAAACA+TGG | 0.626921 | 4_3:-63068144 | None:intergenic |
| GCATCAAAGGCAGAAGCATG+TGG | 0.627838 | 4_3:-63070353 | None:intergenic |
| ATTCTTAGGGCAAACCTCAG+AGG | 0.643235 | 4_3:-63070432 | None:intergenic |
| AAGAAGAAGTCAGCACTGCA+AGG | 0.644914 | 4_3:+63070684 | Msa0654760:CDS |
| CCAATGGCTTCATCTGCCAA+AGG | 0.645058 | 4_3:-63070242 | None:intergenic |
| AGCAAGACCTAGGATTTGTG+AGG | 0.650279 | 4_3:-63068305 | None:intergenic |
| TCACGCGTGCTCTAATCGAA+CGG | 0.650884 | 4_3:+63068047 | Msa0654760:five_prime_UTR |
| TTGAGAAATATCGTGCCTGG+TGG | 0.655055 | 4_3:+63070869 | Msa0654760:CDS |
| ACACTTGGAGATGAAGAGGA+TGG | 0.657366 | 4_3:+63070838 | Msa0654760:CDS |
| AGCTTCGTCCAAAACAGTAA+CGG | 0.658407 | 4_3:-63070909 | None:intergenic |
| AAATGCACTTCCGTTTATCG+CGG | 0.658821 | 4_3:-63068082 | None:intergenic |
| CATCCGCACATAACTCGTCA+GGG | 0.664019 | 4_3:+63070783 | Msa0654760:CDS |
| ACTTACATGAATGCTCCACA+TGG | 0.683680 | 4_3:+63070302 | Msa0654760:CDS |
| ACAATGTCGATCTAATCCAA+CGG | 0.685385 | 4_3:+63068111 | Msa0654760:five_prime_UTR |
| TGTCCCTGACGAGTTATGTG+CGG | 0.691893 | 4_3:-63070786 | None:intergenic |
| GTACCAAAGGCAGAACCATG+TGG | 0.694870 | 4_3:-63070317 | None:intergenic |
| CTCTTGAAAAGGGAAAACCA+AGG | 0.760665 | 4_3:-63068897 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGAAATTCTTTTTTTTTT+TGG | + | chr4_3:63068347-63068366 | Msa0654760:intron | 10.0% |
| !!! | TTGAAATTCTTTTTTTTTTT+GGG | + | chr4_3:63068348-63068367 | Msa0654760:intron | 10.0% |
| !!! | TAAAAATTTATTCAAGTTAA+TGG | + | chr4_3:63068564-63068583 | Msa0654760:intron | 10.0% |
| !!! | AAAAATTTATTCAAGTTAAT+GGG | + | chr4_3:63068565-63068584 | Msa0654760:intron | 10.0% |
| !! | AGAATTTCAAAAATCAAAAT+TGG | - | chr4_3:63068338-63068357 | None:intergenic | 15.0% |
| !!! | TGTTAAAAAGTTTCTATTTT+TGG | + | chr4_3:63068393-63068412 | Msa0654760:intron | 15.0% |
| !!! | ATTTAGGATTTTTATATGTT+AGG | + | chr4_3:63068626-63068645 | Msa0654760:intron | 15.0% |
| !!! | TTCACTTTATTTATTTGTTT+TGG | + | chr4_3:63068703-63068722 | Msa0654760:intron | 15.0% |
| !!! | TTATTTATTTGTTTTGGATT+TGG | + | chr4_3:63068709-63068728 | Msa0654760:intron | 15.0% |
| !! | TAAAATTAATCAAATGGAAA+CGG | + | chr4_3:63070577-63070596 | Msa0654760:CDS | 15.0% |
| !!! | CTAAGAAGATTAAATTTTTG+CGG | - | chr4_3:63068212-63068231 | None:intergenic | 20.0% |
| !!! | TATAGTTTTGATGAAAAGTT+TGG | + | chr4_3:63068519-63068538 | Msa0654760:intron | 20.0% |
| !!! | ATAGTTGATTTTGCATTTAA+TGG | + | chr4_3:63068795-63068814 | Msa0654760:intron | 20.0% |
| !! | CAAAATAAAGTATGAAACTA+AGG | - | chr4_3:63069166-63069185 | None:intergenic | 20.0% |
| !! | ACATGAAATAGTATAACATT+AGG | - | chr4_3:63069210-63069229 | None:intergenic | 20.0% |
| !! | AAGTAAAAAACACTAATTAG+AGG | - | chr4_3:63069309-63069328 | None:intergenic | 20.0% |
| !! | TACGAGATTTGAAAATTAAA+TGG | + | chr4_3:63069470-63069489 | Msa0654760:intron | 20.0% |
| !! | GACATAAAAATATTCTCAAA+AGG | + | chr4_3:63069559-63069578 | Msa0654760:intron | 20.0% |
| !! | ATAAAAATATTCTCAAAAGG+AGG | + | chr4_3:63069562-63069581 | Msa0654760:intron | 20.0% |
| !! | TAATGAAGAATTTCAATACA+AGG | - | chr4_3:63069977-63069996 | None:intergenic | 20.0% |
| !! | TATTGAAATTCTTCATTAGA+AGG | + | chr4_3:63069979-63069998 | Msa0654760:intron | 20.0% |
| !! | AATTCCATCTAAACAAATAT+TGG | - | chr4_3:63070040-63070059 | None:intergenic | 20.0% |
| !! | AATATTTGTTTAGATGGAAT+TGG | + | chr4_3:63070039-63070058 | Msa0654760:intron | 20.0% |
| !! | GAAGGATAAAATTAATCAAA+TGG | + | chr4_3:63070571-63070590 | Msa0654760:CDS | 20.0% |
| !! | TTCGAATTGATTCATTGATT+TGG | + | chr4_3:63068489-63068508 | Msa0654760:intron | 25.0% |
| !! | ATGCTTTGTTAAATTCTAAC+TGG | + | chr4_3:63068656-63068675 | Msa0654760:intron | 25.0% |
| !!! | TTATGATTTTAGAGCTAGAT+TGG | + | chr4_3:63068732-63068751 | Msa0654760:intron | 25.0% |
| ! | GTTTGTCATTAAAGATATTC+TGG | + | chr4_3:63068854-63068873 | Msa0654760:five_prime_UTR | 25.0% |
| ! | AACACAATTACTCTTGAAAA+GGG | - | chr4_3:63068910-63068929 | None:intergenic | 25.0% |
| ! | AAACACAATTACTCTTGAAA+AGG | - | chr4_3:63068911-63068930 | None:intergenic | 25.0% |
| ! | TTCTGTAATTTAATTAGCTG+AGG | + | chr4_3:63068955-63068974 | Msa0654760:five_prime_UTR | 25.0% |
| !! | TGAAGTCAGTATTATTGTTT+TGG | + | chr4_3:63069068-63069087 | Msa0654760:intron | 25.0% |
| !!! | TCAGTATTATTGTTTTGGAT+TGG | + | chr4_3:63069073-63069092 | Msa0654760:intron | 25.0% |
| !!! | TATTATTGTTTTGGATTGGT+TGG | + | chr4_3:63069077-63069096 | Msa0654760:intron | 25.0% |
| !!! | ATTATTGTTTTGGATTGGTT+GGG | + | chr4_3:63069078-63069097 | Msa0654760:intron | 25.0% |
| ! | TAATATCTAGCATGCAAAAT+CGG | - | chr4_3:63069513-63069532 | None:intergenic | 25.0% |
| ! | CTAAAAATCTTCTCAAAAAG+TGG | + | chr4_3:63069605-63069624 | Msa0654760:intron | 25.0% |
| ! | CAAAGACAATGAAATTCTTA+GGG | - | chr4_3:63070448-63070467 | None:intergenic | 25.0% |
| ! | TCAAAGACAATGAAATTCTT+AGG | - | chr4_3:63070449-63070468 | None:intergenic | 25.0% |
| CTGTTCTTGAGATTAGATTT+AGG | + | chr4_3:63068610-63068629 | Msa0654760:intron | 30.0% | |
| ! | AGGTAGTCTTTTACTTCTAT+TGG | + | chr4_3:63068759-63068778 | Msa0654760:intron | 30.0% |
| !! | ATCCTAATTTTGACACTTTC+AGG | + | chr4_3:63068819-63068838 | Msa0654760:intron | 30.0% |
| ATTCTATAAACTATAGCAGC+AGG | - | chr4_3:63069002-63069021 | None:intergenic | 30.0% | |
| TTCATAACTTCAACTTTCCA+CGG | - | chr4_3:63069052-63069071 | None:intergenic | 30.0% | |
| !! | CAGTGTATTGTTTCTATCTA+CGG | - | chr4_3:63069133-63069152 | None:intergenic | 30.0% |
| !! | CATTTTAATGTACCCAACTT+TGG | - | chr4_3:63069364-63069383 | None:intergenic | 30.0% |
| ! | TAAATATTTCTCCCCTTTTC+TGG | + | chr4_3:63069430-63069449 | Msa0654760:intron | 30.0% |
| AAATCTCGTATCCAAAATCA+TGG | - | chr4_3:63069460-63069479 | None:intergenic | 30.0% | |
| TGAGCTTCATTATCTTGTTA+TGG | + | chr4_3:63069665-63069684 | Msa0654760:intron | 30.0% | |
| ! | CATTATCTTGTTATGGCTAA+TGG | + | chr4_3:63069672-63069691 | Msa0654760:intron | 30.0% |
| TATAAAGCAACATGCTTTGA+AGG | + | chr4_3:63069698-63069717 | Msa0654760:intron | 30.0% | |
| TAAGGTAGCAATAATAGAAC+AGG | - | chr4_3:63069848-63069867 | None:intergenic | 30.0% | |
| AGAAAACGAAGTGGTATATA+AGG | - | chr4_3:63069866-63069885 | None:intergenic | 30.0% | |
| GTTGCCAATATTTGTTTAGA+TGG | + | chr4_3:63070033-63070052 | Msa0654760:intron | 30.0% | |
| AAATTATTCTGTACTAGAGC+TGG | - | chr4_3:63070117-63070136 | None:intergenic | 30.0% | |
| AGCATTCATATAAGTACCAA+AGG | - | chr4_3:63070333-63070352 | None:intergenic | 30.0% | |
| TGCAAGTTAAACCTTTCAAA+TGG | - | chr4_3:63070410-63070429 | None:intergenic | 30.0% | |
| ATCAAACAGATCAACAAAAC+AGG | + | chr4_3:63070468-63070487 | Msa0654760:CDS | 30.0% | |
| ! | ATTGTCATCTTCTTTTGTAG+AGG | + | chr4_3:63070601-63070620 | Msa0654760:CDS | 30.0% |
| GATTAGATCGACATTGTTCT+TGG | - | chr4_3:63068108-63068127 | None:intergenic | 35.0% | |
| ACAATGTCGATCTAATCCAA+CGG | + | chr4_3:63068111-63068130 | Msa0654760:five_prime_UTR | 35.0% | |
| !! | GGAGCATTTTCAAGATATGA+AGG | - | chr4_3:63068171-63068190 | None:intergenic | 35.0% |
| GTGTGAAAGGAAATTGAAGA+TGG | - | chr4_3:63068273-63068292 | None:intergenic | 35.0% | |
| ATTTGTGAGGAAGAGGAAAA+GGG | - | chr4_3:63068295-63068314 | None:intergenic | 35.0% | |
| !! | GACCTGAAAGTGTCAAAATT+AGG | - | chr4_3:63068824-63068843 | None:intergenic | 35.0% |
| CAAGAGTAATTGTGTTTGCT+TGG | + | chr4_3:63068914-63068933 | Msa0654760:five_prime_UTR | 35.0% | |
| CTGATGTCGTATAAGCTATA+TGG | - | chr4_3:63069108-63069127 | None:intergenic | 35.0% | |
| AGAATGTTCATTGCCAAAGT+TGG | + | chr4_3:63069348-63069367 | Msa0654760:exon | 35.0% | |
| GAATGTTCATTGCCAAAGTT+GGG | + | chr4_3:63069349-63069368 | Msa0654760:exon | 35.0% | |
| GGGTACATTAAAATGAGTGT+TGG | + | chr4_3:63069369-63069388 | Msa0654760:CDS | 35.0% | |
| TGCATACAGTCAATTGATGT+TGG | + | chr4_3:63069398-63069417 | Msa0654760:CDS | 35.0% | |
| AAAGGGGAGAAATATTTACC+TGG | - | chr4_3:63069428-63069447 | None:intergenic | 35.0% | |
| AATCATGGCAATCCAGAAAA+GGG | - | chr4_3:63069445-63069464 | None:intergenic | 35.0% | |
| AAATCATGGCAATCCAGAAA+AGG | - | chr4_3:63069446-63069465 | None:intergenic | 35.0% | |
| ! | TTTCTGGATTGCCATGATTT+TGG | + | chr4_3:63069446-63069465 | Msa0654760:intron | 35.0% |
| !! | CAACATGCTTTGAAGGTTAT+CGG | + | chr4_3:63069705-63069724 | Msa0654760:intron | 35.0% |
| GAACATACACACTTTGTGAA+TGG | + | chr4_3:63069737-63069756 | Msa0654760:intron | 35.0% | |
| TTTAGTTGTTACATCCCTGT+AGG | + | chr4_3:63070082-63070101 | Msa0654760:intron | 35.0% | |
| AGAATAATTTCCAGTTGCAC+AGG | + | chr4_3:63070127-63070146 | Msa0654760:intron | 35.0% | |
| ! | AAACGCAAACAATGCTGATT+TGG | - | chr4_3:63070153-63070172 | None:intergenic | 35.0% |
| ! | TTTAGTTTAGTGAGAGTGGA+CGG | + | chr4_3:63070170-63070189 | Msa0654760:CDS | 35.0% |
| AGCATTCATATAAGTGCCAA+TGG | - | chr4_3:63070261-63070280 | None:intergenic | 35.0% | |
| GTCAGATAACACCATTTGAA+AGG | + | chr4_3:63070396-63070415 | Msa0654760:CDS | 35.0% | |
| !! | TTGCACTCAAGATTTTGAGA+AGG | + | chr4_3:63070553-63070572 | Msa0654760:CDS | 35.0% |
| ! | TTCTTTTGTAGAGGACTCTA+AGG | + | chr4_3:63070610-63070629 | Msa0654760:CDS | 35.0% |
| CAGTGAAAAGAAACAACACT+TGG | + | chr4_3:63070823-63070842 | Msa0654760:CDS | 35.0% | |
| ATATTGAGAAATATCGTGCC+TGG | + | chr4_3:63070866-63070885 | Msa0654760:CDS | 35.0% | |
| AAAATACCTCAAGTCTCTCA+AGG | + | chr4_3:63070934-63070953 | Msa0654760:CDS | 35.0% | |
| ACTATCATACCCGCGATAAA+CGG | + | chr4_3:63068072-63068091 | Msa0654760:five_prime_UTR | 40.0% | |
| AAATGCACTTCCGTTTATCG+CGG | - | chr4_3:63068085-63068104 | None:intergenic | 40.0% | |
| ! | TCAAGATATGAAGGCGTGAT+GGG | - | chr4_3:63068162-63068181 | None:intergenic | 40.0% |
| ! | TTCAAGATATGAAGGCGTGA+TGG | - | chr4_3:63068163-63068182 | None:intergenic | 40.0% |
| !!! | CGGAGAAGAGTTTTGAGATT+GGG | - | chr4_3:63068192-63068211 | None:intergenic | 40.0% |
| GAAGATGGATCAGAGAAGAA+GGG | - | chr4_3:63068258-63068277 | None:intergenic | 40.0% | |
| TGAAGATGGATCAGAGAAGA+AGG | - | chr4_3:63068259-63068278 | None:intergenic | 40.0% | |
| GATTTGTGAGGAAGAGGAAA+AGG | - | chr4_3:63068296-63068315 | None:intergenic | 40.0% | |
| ! | TTTAGAGCTAGATTGGAGTG+AGG | + | chr4_3:63068739-63068758 | Msa0654760:intron | 40.0% |
| !! | ACACTTTCAGGTCAGAGTTT+TGG | + | chr4_3:63068831-63068850 | Msa0654760:intron | 40.0% |
| !! | CACTTTCAGGTCAGAGTTTT+GGG | + | chr4_3:63068832-63068851 | Msa0654760:intron | 40.0% |
| TGAGATCAATCAAGATGCCT+TGG | + | chr4_3:63068880-63068899 | Msa0654760:five_prime_UTR | 40.0% | |
| CTCTTGAAAAGGGAAAACCA+AGG | - | chr4_3:63068900-63068919 | None:intergenic | 40.0% | |
| GAGTAATTGTGTTTGCTTGG+TGG | + | chr4_3:63068917-63068936 | Msa0654760:five_prime_UTR | 40.0% | |
| !! | TCAATTGATGTTGGTTTGCC+AGG | + | chr4_3:63069407-63069426 | Msa0654760:CDS | 40.0% |
| ATCATGGCAATCCAGAAAAG+GGG | - | chr4_3:63069444-63069463 | None:intergenic | 40.0% | |
| TATCTAGCATGCAAAATCGG+AGG | - | chr4_3:63069510-63069529 | None:intergenic | 40.0% | |
| TACACACTTTGTGAATGGCA+TGG | + | chr4_3:63069742-63069761 | Msa0654760:intron | 40.0% | |
| ! | ACCACTTCGTTTTCTTATGC+AGG | + | chr4_3:63069871-63069890 | Msa0654760:intron | 40.0% |
| TTGAAGCTAGACTACGTAAC+AGG | - | chr4_3:63069923-63069942 | None:intergenic | 40.0% | |
| ! | TGTTACGTAGTCTAGCTTCA+AGG | + | chr4_3:63069922-63069941 | Msa0654760:intron | 40.0% |
| ! | AGCTTCAAGGAACGTTGATT+TGG | + | chr4_3:63069935-63069954 | Msa0654760:intron | 40.0% |
| !! | GCTTCAAGGAACGTTGATTT+GGG | + | chr4_3:63069936-63069955 | Msa0654760:intron | 40.0% |
| !! | AAGGAACGTTGATTTGGGTT+TGG | + | chr4_3:63069941-63069960 | Msa0654760:intron | 40.0% |
| !! | AGGAACGTTGATTTGGGTTT+GGG | + | chr4_3:63069942-63069961 | Msa0654760:intron | 40.0% |
| GGATGTAACAACTAAACAGC+AGG | - | chr4_3:63070078-63070097 | None:intergenic | 40.0% | |
| TATTCTGTACTAGAGCTGGA+TGG | - | chr4_3:63070113-63070132 | None:intergenic | 40.0% | |
| ! | TGCGTTTAGTTTAGTGAGAG+TGG | + | chr4_3:63070166-63070185 | Msa0654760:CDS | 40.0% |
| ACTTACATGAATGCTCCACA+TGG | + | chr4_3:63070302-63070321 | Msa0654760:CDS | 40.0% | |
| TTAAACTTGTAGGTCGTTGC+AGG | - | chr4_3:63070506-63070525 | None:intergenic | 40.0% | |
| ACCTACAAGTTTAACAGTCC+CGG | + | chr4_3:63070512-63070531 | Msa0654760:CDS | 40.0% | |
| AACAACACTTGGAGATGAAG+AGG | + | chr4_3:63070834-63070853 | Msa0654760:CDS | 40.0% | |
| AAACAGTAACGGTGTCCATT+TGG | - | chr4_3:63070901-63070920 | None:intergenic | 40.0% | |
| ! | AATGGACACCGTTACTGTTT+TGG | + | chr4_3:63070901-63070920 | Msa0654760:CDS | 40.0% |
| AGCTTCGTCCAAAACAGTAA+CGG | - | chr4_3:63070912-63070931 | None:intergenic | 40.0% | |
| AAGGTTGAAGTCGAGCAATT+CGG | + | chr4_3:63070953-63070972 | Msa0654760:CDS | 40.0% | |
| AATGCACTTCCGTTTATCGC+GGG | - | chr4_3:63068084-63068103 | None:intergenic | 45.0% | |
| ! | ATATGAAGGCGTGATGGGAT+GGG | - | chr4_3:63068157-63068176 | None:intergenic | 45.0% |
| !!! | GCGGAGAAGAGTTTTGAGAT+TGG | - | chr4_3:63068193-63068212 | None:intergenic | 45.0% |
| ! | GAAGAGGAAAAGGGTGTGAA+AGG | - | chr4_3:63068286-63068305 | None:intergenic | 45.0% |
| TCCTCTTCCTCACAAATCCT+AGG | + | chr4_3:63068298-63068317 | Msa0654760:five_prime_UTR | 45.0% | |
| ACCTAGGATTTGTGAGGAAG+AGG | - | chr4_3:63068302-63068321 | None:intergenic | 45.0% | |
| AGCAAGACCTAGGATTTGTG+AGG | - | chr4_3:63068308-63068327 | None:intergenic | 45.0% | |
| TGGAGTGAAAAGCAAGACCT+AGG | - | chr4_3:63068318-63068337 | None:intergenic | 45.0% | |
| !! | ACTTTTTCTACTGCTTGCCG+TGG | + | chr4_3:63069032-63069051 | Msa0654760:intron | 45.0% |
| GCCTGCATAAGAAAACGAAG+TGG | - | chr4_3:63069875-63069894 | None:intergenic | 45.0% | |
| !! | GGAACGTTGATTTGGGTTTG+GGG | + | chr4_3:63069943-63069962 | Msa0654760:intron | 45.0% |
| ! | GACTCACGAGTATTTTCTCC+CGG | + | chr4_3:63070205-63070224 | Msa0654760:CDS | 45.0% |
| ! | ACTCACGAGTATTTTCTCCC+GGG | + | chr4_3:63070206-63070225 | Msa0654760:CDS | 45.0% |
| TGGAGGTAAAACGGCATCAA+AGG | - | chr4_3:63070369-63070388 | None:intergenic | 45.0% | |
| ACTCGCACTTGGAGGTAAAA+CGG | - | chr4_3:63070378-63070397 | None:intergenic | 45.0% | |
| TTCTTAGGGCAAACCTCAGA+GGG | - | chr4_3:63070434-63070453 | None:intergenic | 45.0% | |
| ATTCTTAGGGCAAACCTCAG+AGG | - | chr4_3:63070435-63070454 | None:intergenic | 45.0% | |
| !! | AGTAGCATGAGTGTTGAAGC+CGG | - | chr4_3:63070534-63070553 | None:intergenic | 45.0% |
| TGCATTGTTGAGCCTAGACT+CGG | + | chr4_3:63070640-63070659 | Msa0654760:CDS | 45.0% | |
| !! | CTTCTAGTTCATCCGAGTCT+AGG | - | chr4_3:63070655-63070674 | None:intergenic | 45.0% |
| AAGAAGAAGTCAGCACTGCA+AGG | + | chr4_3:63070684-63070703 | Msa0654760:CDS | 45.0% | |
| GTAACTGGAGCAAGTATCAG+AGG | - | chr4_3:63070732-63070751 | None:intergenic | 45.0% | |
| CCTTGATTTCGTGCAGTAAC+TGG | - | chr4_3:63070747-63070766 | None:intergenic | 45.0% | |
| CCAGTTACTGCACGAAATCA+AGG | + | chr4_3:63070744-63070763 | Msa0654760:CDS | 45.0% | |
| GCACGAAATCAAGGAAGAAG+AGG | + | chr4_3:63070753-63070772 | Msa0654760:CDS | 45.0% | |
| ACATAACTCGTCAGGGACAA+AGG | + | chr4_3:63070790-63070809 | Msa0654760:CDS | 45.0% | |
| CATAACTCGTCAGGGACAAA+GGG | + | chr4_3:63070791-63070810 | Msa0654760:CDS | 45.0% | |
| ACACTTGGAGATGAAGAGGA+TGG | + | chr4_3:63070838-63070857 | Msa0654760:CDS | 45.0% | |
| TTGAGAAATATCGTGCCTGG+TGG | + | chr4_3:63070869-63070888 | Msa0654760:CDS | 45.0% | |
| CTTCAACCTTGAGAGACTTG+AGG | - | chr4_3:63070943-63070962 | None:intergenic | 45.0% | |
| TCACGCGTGCTCTAATCGAA+CGG | + | chr4_3:63068047-63068066 | Msa0654760:five_prime_UTR | 50.0% | |
| ACATGGATGATCTCAGCCGT+TGG | - | chr4_3:63068130-63068149 | None:intergenic | 50.0% | |
| ! | GTGATGGGATGGGTCAAACA+TGG | - | chr4_3:63068147-63068166 | None:intergenic | 50.0% |
| ! | GATATGAAGGCGTGATGGGA+TGG | - | chr4_3:63068158-63068177 | None:intergenic | 50.0% |
| TTATCCTGTCTTGCTGCTGC+AGG | + | chr4_3:63069262-63069281 | Msa0654760:intron | 50.0% | |
| TCTTGCTGCTGCAGGTGATT+AGG | + | chr4_3:63069270-63069289 | Msa0654760:intron | 50.0% | |
| GCTGGATGGATGTTCCTACA+GGG | - | chr4_3:63070099-63070118 | None:intergenic | 50.0% | |
| AGCTGGATGGATGTTCCTAC+AGG | - | chr4_3:63070100-63070119 | None:intergenic | 50.0% | |
| ! | CGAGTATTTTCTCCCGGGAA+AGG | + | chr4_3:63070211-63070230 | Msa0654760:CDS | 50.0% |
| AAAGGACGTACTGCCTTTCC+CGG | - | chr4_3:63070227-63070246 | None:intergenic | 50.0% | |
| CCAATGGCTTCATCTGCCAA+AGG | - | chr4_3:63070245-63070264 | None:intergenic | 50.0% | |
| CCTTTGGCAGATGAAGCCAT+TGG | + | chr4_3:63070242-63070261 | Msa0654760:CDS | 50.0% | |
| GCTCCACATGCTTCTGCTTT+CGG | + | chr4_3:63070278-63070297 | Msa0654760:CDS | 50.0% | |
| ! | GTACCGAAAGCAGAAGCATG+TGG | - | chr4_3:63070284-63070303 | None:intergenic | 50.0% |
| GTACCAAAGGCAGAACCATG+TGG | - | chr4_3:63070320-63070339 | None:intergenic | 50.0% | |
| ! | GCATCAAAGGCAGAAGCATG+TGG | - | chr4_3:63070356-63070375 | None:intergenic | 50.0% |
| ! | GTTATCTGACTCGCACTTGG+AGG | - | chr4_3:63070386-63070405 | None:intergenic | 50.0% |
| ! | GGTGTTATCTGACTCGCACT+TGG | - | chr4_3:63070389-63070408 | None:intergenic | 50.0% |
| !! | GTTTAACTTGCAGCCCTCTG+AGG | + | chr4_3:63070418-63070437 | Msa0654760:CDS | 50.0% |
| ACTTGTAGGTCGTTGCAGGA+TGG | - | chr4_3:63070502-63070521 | None:intergenic | 50.0% | |
| GCCGGGACTGTTAAACTTGT+AGG | - | chr4_3:63070516-63070535 | None:intergenic | 50.0% | |
| !! | GTAGCATGAGTGTTGAAGCC+GGG | - | chr4_3:63070533-63070552 | None:intergenic | 50.0% |
| TCATCCGCACATAACTCGTC+AGG | + | chr4_3:63070782-63070801 | Msa0654760:CDS | 50.0% | |
| CATCCGCACATAACTCGTCA+GGG | + | chr4_3:63070783-63070802 | Msa0654760:CDS | 50.0% | |
| TGTCCCTGACGAGTTATGTG+CGG | - | chr4_3:63070789-63070808 | None:intergenic | 50.0% | |
| AGAAATATCGTGCCTGGTGG+AGG | + | chr4_3:63070872-63070891 | Msa0654760:CDS | 50.0% | |
| GAAGTCGAGCAATTCGGAGT+TGG | + | chr4_3:63070959-63070978 | Msa0654760:CDS | 50.0% | |
| ATCACCTGCAGCAGCAAGAC+AGG | - | chr4_3:63069269-63069288 | None:intergenic | 55.0% | |
| TGCAGGTGATTAGGCTGCAG+AGG | + | chr4_3:63069279-63069298 | Msa0654760:intron | 55.0% | |
| !! | GCTGATTTGGCCTGTGCAAC+TGG | - | chr4_3:63070140-63070159 | None:intergenic | 55.0% |
| AAGGACGTACTGCCTTTCCC+GGG | - | chr4_3:63070226-63070245 | None:intergenic | 55.0% | |
| GGGAAAGGCAGTACGTCCTT+TGG | + | chr4_3:63070226-63070245 | Msa0654760:CDS | 55.0% | |
| ! | GCTCCACATGGTTCTGCCTT+TGG | + | chr4_3:63070314-63070333 | Msa0654760:CDS | 55.0% |
| TCCATTTGGTTGCCTCCACC+AGG | - | chr4_3:63070887-63070906 | None:intergenic | 55.0% | |
| GCCTGGTGGAGGCAACCAAA+TGG | + | chr4_3:63070883-63070902 | Msa0654760:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 63068045 | 63070985 | 63068045 | ID=Msa0654760;Name=Msa0654760 |
| chr4_3 | mRNA | 63068045 | 63070985 | 63068045 | ID=Msa0654760-mRNA-1;Parent=Msa0654760;Name=Msa0654760-mRNA-1;_AED=0.16;_eAED=0.19;_QI=478|0.66|0.75|1|0|0|4|0|305 |
| chr4_3 | exon | 63068045 | 63068319 | 63068045 | ID=Msa0654760-mRNA-1:exon:17629;Parent=Msa0654760-mRNA-1 |
| chr4_3 | exon | 63068841 | 63068976 | 63068841 | ID=Msa0654760-mRNA-1:exon:17630;Parent=Msa0654760-mRNA-1 |
| chr4_3 | exon | 63069284 | 63069428 | 63069284 | ID=Msa0654760-mRNA-1:exon:17631;Parent=Msa0654760-mRNA-1 |
| chr4_3 | exon | 63070149 | 63070985 | 63070149 | ID=Msa0654760-mRNA-1:exon:17632;Parent=Msa0654760-mRNA-1 |
| chr4_3 | five_prime_UTR | 63068045 | 63068319 | 63068045 | ID=Msa0654760-mRNA-1:five_prime_utr;Parent=Msa0654760-mRNA-1 |
| chr4_3 | five_prime_UTR | 63068841 | 63068976 | 63068841 | ID=Msa0654760-mRNA-1:five_prime_utr;Parent=Msa0654760-mRNA-1 |
| chr4_3 | five_prime_UTR | 63069284 | 63069350 | 63069284 | ID=Msa0654760-mRNA-1:five_prime_utr;Parent=Msa0654760-mRNA-1 |
| chr4_3 | CDS | 63069351 | 63069428 | 63069351 | ID=Msa0654760-mRNA-1:cds;Parent=Msa0654760-mRNA-1 |
| chr4_3 | CDS | 63070149 | 63070985 | 63070149 | ID=Msa0654760-mRNA-1:cds;Parent=Msa0654760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
