AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1295490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295490 MtrunA17_Chr8g0373001 99.029 412 4 0 1 412 1 412 0.0 839
Msa1295490 MtrunA17_Chr5g0404321 73.077 416 108 2 1 412 1 416 0.0 630
Msa1295490 MtrunA17_Chr8g0373361 70.660 409 102 7 1 405 11 405 0.0 548
Msa1295490 MtrunA17_Chr1g0155301 59.028 432 147 7 1 412 1 422 6.89e-174 492
Msa1295490 MtrunA17_Chr8g0373331 58.881 411 100 8 1 405 1 348 4.69e-154 439
Msa1295490 MtrunA17_Chr2g0286441 57.182 369 149 3 46 412 32 393 5.47e-147 422
Msa1295490 MtrunA17_Chr2g0278511 52.326 430 184 8 1 412 1 427 6.17e-147 424
Msa1295490 MtrunA17_Chr1g0196071 51.429 420 178 6 1 412 1 402 4.62e-143 413
Msa1295490 MtrunA17_Chr1g0201891 51.253 439 179 12 1 412 1 431 8.03e-143 414
Msa1295490 MtrunA17_Chr2g0315641 50.954 367 150 2 46 412 35 371 5.57e-125 366
Msa1295490 MtrunA17_Chr8g0373351 52.320 388 71 9 37 409 3 291 1.78e-111 328
Msa1295490 MtrunA17_Chr2g0315651 45.479 376 168 7 41 412 25 367 9.01e-100 301
Msa1295490 MtrunA17_Chr1g0156151 55.502 209 87 2 1 205 1 207 4.65e-70 220
Msa1295490 MtrunA17_Chr8g0373341 59.193 223 47 5 1 205 1 197 1.12e-65 212
Msa1295490 MtrunA17_Chr8g0373341 58.537 123 50 1 281 402 198 320 7.78e-39 142
Msa1295490 MtrunA17_Chr3g0091401 52.475 101 41 2 96 196 9 102 2.10e-26 102
Msa1295490 MtrunA17_Chr2g0334041 27.513 189 114 7 233 411 184 359 5.64e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295490 AT2G18280.2 62.981 416 127 9 1 412 1 393 1.45e-177 501
Msa1295490 AT2G18280.1 62.981 416 127 9 1 412 1 393 1.45e-177 501
Msa1295490 AT1G47270.3 54.907 428 137 10 1 412 1 388 4.59e-150 431
Msa1295490 AT1G47270.1 54.907 428 137 10 1 412 26 413 6.92e-150 431
Msa1295490 AT1G47270.2 54.907 428 137 10 1 412 25 412 8.41e-150 431
Msa1295490 AT2G47900.3 53.957 417 177 8 1 412 1 407 5.82e-149 429
Msa1295490 AT2G47900.2 54.087 416 177 8 1 412 1 406 1.26e-148 427
Msa1295490 AT2G47900.1 54.087 416 177 8 1 412 1 406 1.26e-148 427
Msa1295490 AT1G25280.1 50.111 449 183 9 1 412 1 445 1.92e-143 416
Msa1295490 AT1G76900.2 48.908 458 185 8 1 412 1 455 7.07e-138 402
Msa1295490 AT1G76900.1 48.908 458 185 8 1 412 1 455 7.07e-138 402
Msa1295490 AT1G76900.3 48.908 458 185 8 1 412 1 455 7.07e-138 402
Msa1295490 AT1G43640.1 47.045 440 194 11 1 412 1 429 5.48e-129 379
Msa1295490 AT3G06380.1 51.507 365 155 7 53 412 33 380 7.71e-123 361
Msa1295490 AT1G53320.1 51.515 363 146 4 53 412 44 379 2.29e-122 360
Msa1295490 AT5G18680.1 50.136 369 165 6 49 412 35 389 6.08e-120 354
Msa1295490 AT1G43640.2 48.787 371 159 8 65 412 1 363 3.81e-116 343
Msa1295490 AT3G06380.2 51.163 301 126 6 116 412 5 288 3.88e-98 295
Msa1295490 AT5G18680.2 50.809 309 134 5 108 412 3 297 5.29e-98 295
Msa1295490 AT1G25280.3 52.239 268 100 5 172 412 1 267 1.77e-86 264
Msa1295490 AT1G25280.2 52.239 268 100 5 172 412 1 267 1.77e-86 264
Msa1295490 AT1G61940.2 54.023 87 40 0 56 142 1 87 6.48e-28 111
Msa1295490 AT1G61940.1 54.098 61 28 0 56 116 1 61 2.68e-16 78.6

Find 142 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAGAGTTATTTGAATTTA+TGG 0.037907 8_3:-53655460 None:intergenic
TGTGGCCCTTCTTATCTTTC+TGG 0.112808 8_3:-53657025 None:intergenic
ATTACCTGCTTCAATGAAAT+AGG 0.231585 8_3:-53656583 None:intergenic
ATGATGCAGTGCACTCTTCT+TGG 0.233427 8_3:-53657399 None:intergenic
TGTATAAGTTGTATTGATTC+TGG 0.233611 8_3:+53658031 Msa1295490:three_prime_UTR
CTTCACCGCCACCGCGATTC+TGG 0.271168 8_3:-53655399 None:intergenic
TCTACCTCCTGAATTGCTTT+TGG 0.284311 8_3:+53656417 Msa1295490:CDS
TGACCGACATAGCCAATTCT+TGG 0.292823 8_3:-53656332 None:intergenic
ATCTTACAGTTTGGAAAGAT+TGG 0.295811 8_3:+53657765 Msa1295490:CDS
GAGGTAACGATGTTGGGGTT+GGG 0.312924 8_3:-53657464 None:intergenic
TATACCTATCTCAGCTATTC+AGG 0.328559 8_3:+53657428 Msa1295490:CDS
ATCCGATCCAGTGCTTTATT+AGG 0.329707 8_3:+53656716 Msa1295490:CDS
CTTGCACTTGGTCGACGATT+AGG 0.330477 8_3:-53657282 None:intergenic
CTCTCATTCACAAGCAGGTT+TGG 0.347646 8_3:-53657868 None:intergenic
TCCAATTGAACCTATTCAAC+AGG 0.350379 8_3:+53656381 Msa1295490:CDS
ATATTTGAGGTAACGATGTT+GGG 0.363096 8_3:-53657470 None:intergenic
TTTACCAACATATTTGTTGC+TGG 0.366133 8_3:-53657094 None:intergenic
CCAGAGAGCATTTAGCTCAT+AGG 0.369135 8_3:-53657367 None:intergenic
CCCTGTTGAATAGGTTCAAT+TGG 0.369838 8_3:-53656382 None:intergenic
GAAAGGGTAATCTTACAGTT+TGG 0.371540 8_3:+53657756 Msa1295490:CDS
AGGTAACGATGTTGGGGTTG+GGG 0.375686 8_3:-53657463 None:intergenic
ATTATGTCCAAAAGCAATTC+AGG 0.377900 8_3:-53656424 None:intergenic
CTTCGTGTTGTACTTAGGTT+TGG 0.385998 8_3:+53656759 Msa1295490:CDS
CACCGACTTTGTCATATCCT+TGG 0.386843 8_3:+53657050 Msa1295490:CDS
TTTATTATGTTTATTTATGT+TGG 0.389066 8_3:-53655302 None:intergenic
GTGTTGGTGCCTAAACTTCA+TGG 0.395112 8_3:+53657650 Msa1295490:CDS
ATCGAGCCTTGGCTCGGTTC+TGG 0.397446 8_3:-53657576 None:intergenic
CGATTCTGGAGAATCGCGTT+TGG 0.417780 8_3:-53655385 None:intergenic
TGAGGTAACGATGTTGGGGT+TGG 0.418830 8_3:-53657465 None:intergenic
TAACACGACCCATGAAGTTT+AGG 0.421461 8_3:-53657659 None:intergenic
GATTCTGGAGAATCGCGTTT+GGG 0.427715 8_3:-53655384 None:intergenic
CCAGCATGTAACAATCTTGT+TGG 0.440142 8_3:+53657336 Msa1295490:CDS
AACAATAACACTATAGAATA+CGG 0.447248 8_3:-53655547 None:intergenic
TCAAACAGATTGCAAAGGCT+TGG 0.450978 8_3:-53657833 None:intergenic
GTGCTTCGGTATGTAAATCA+TGG 0.451227 8_3:+53656503 Msa1295490:CDS
ACCGACTTTGTCATATCCTT+GGG 0.452958 8_3:+53657051 Msa1295490:CDS
AAAACAACAACAGCACGAGC+AGG 0.453602 8_3:-53656478 None:intergenic
TTTCTTCCGCTGAGCAAGAA+AGG 0.454492 8_3:+53657739 Msa1295490:CDS
CCTTCCTGAATAGCTGAGAT+AGG 0.455053 8_3:-53657432 None:intergenic
ATTTCCTATTTCATTGAAGC+AGG 0.465510 8_3:+53656579 Msa1295490:CDS
GGGGTTCCGACACCAAGAAT+TGG 0.468962 8_3:+53656320 Msa1295490:CDS
TCTACCTTCGTGTTGTACTT+AGG 0.472018 8_3:+53656754 Msa1295490:CDS
AATATTTGAGGTAACGATGT+TGG 0.472032 8_3:-53657471 None:intergenic
AGCATTTAGCTCATAGGAAA+TGG 0.472326 8_3:-53657361 None:intergenic
GCCCACTGTCCCTGTTGAAT+AGG 0.474061 8_3:-53656391 None:intergenic
AGTGCTGGTGAGGGAGGAAA+AGG 0.475950 8_3:-53657501 None:intergenic
CCAGAGTACGAATCTGTCAT+TGG 0.478687 8_3:-53657537 None:intergenic
AAAGGTTCACTGAATATTTG+AGG 0.481469 8_3:-53657483 None:intergenic
TTGAAGAGAGTGAGACATCT+TGG 0.483464 8_3:+53656455 Msa1295490:CDS
TTGTTGCATATTAAAATGCT+AGG 0.483851 8_3:+53657926 Msa1295490:three_prime_UTR
GTTGTCATATATAGCAAACT+TGG 0.484168 8_3:-53657232 None:intergenic
TTAGGTTGAACTGCAGCGTC+AGG 0.490125 8_3:-53657264 None:intergenic
CGATCCAGTGCTTTATTAGG+AGG 0.490560 8_3:+53656719 Msa1295490:CDS
CTAAATGCTCTCTGGACAAG+AGG 0.490562 8_3:+53657375 Msa1295490:CDS
CCAAGGCTCGATGGACTCCT+TGG 0.492424 8_3:+53657587 Msa1295490:CDS
CCTATGAGCTAAATGCTCTC+TGG 0.493546 8_3:+53657367 Msa1295490:CDS
CACAGCTCTCATTCACAAGC+AGG 0.495782 8_3:-53657873 None:intergenic
GGTTCAATTGGAGTTACATC+CGG 0.496479 8_3:-53656370 None:intergenic
TTAATATGCAACAAATCAGC+AGG 0.497220 8_3:-53657917 None:intergenic
GTCAAAGTCACATGTTGCTC+CGG 0.499201 8_3:+53656351 Msa1295490:CDS
TTGTTACATGCTGGAACTCT+TGG 0.500747 8_3:-53657327 None:intergenic
TCGGTTCTGGTAGCTCTGAT+AGG 0.502232 8_3:-53657563 None:intergenic
AAGCATAGTCCGCGAACTCA+AGG 0.507358 8_3:+53656264 Msa1295490:CDS
TTGGATTGGTGGAGTTTGCA+AGG 0.512498 8_3:+53656221 Msa1295490:five_prime_UTR
ACAGATTGCAAAGGCTTGGA+AGG 0.518500 8_3:-53657829 None:intergenic
CACCGAGCACTTCAGCATGC+AGG 0.520072 8_3:+53657971 Msa1295490:three_prime_UTR
CACCTGCATGCTGAAGTGCT+CGG 0.521417 8_3:-53657973 None:intergenic
GATCGGATAATCACGAGGAC+CGG 0.524270 8_3:-53656701 None:intergenic
TGCAAGACTTAATTCTAAGC+AGG 0.525564 8_3:+53657299 Msa1295490:CDS
AATAGGTAGCATATCAAAGC+GGG 0.526116 8_3:+53656300 Msa1295490:CDS
GAATCAATACAACTTATACA+TGG 0.527559 8_3:-53658028 None:intergenic
TGAACTGCAGCGTCAGGTGG+AGG 0.528278 8_3:-53657258 None:intergenic
ATTCTCCAGAATCGCGGTGG+CGG 0.530765 8_3:+53655394 Msa1295490:five_prime_UTR
TTCTTCCGCTGAGCAAGAAA+GGG 0.530855 8_3:+53657740 Msa1295490:CDS
AATCAATACAACTTATACAT+GGG 0.535938 8_3:-53658027 None:intergenic
TTGGTGGAGTTTGCAAGGTG+TGG 0.536602 8_3:+53656226 Msa1295490:five_prime_UTR
CCTATCTCAGCTATTCAGGA+AGG 0.539583 8_3:+53657432 Msa1295490:CDS
CCAAGGAGTCCATCGAGCCT+TGG 0.540676 8_3:-53657587 None:intergenic
TGTTCCTCCTAATAAAGCAC+TGG 0.546307 8_3:-53656723 None:intergenic
ATCGGATAATCACGAGGACC+GGG 0.546623 8_3:-53656700 None:intergenic
TCTTTCAGTGCTGGTGAGGG+AGG 0.551006 8_3:-53657507 None:intergenic
CCAATGACAGATTCGTACTC+TGG 0.552500 8_3:+53657537 Msa1295490:CDS
TAGCCGCCAGAAAGATAAGA+AGG 0.555283 8_3:+53657019 Msa1295490:CDS
CCAACAAGATTGTTACATGC+TGG 0.555601 8_3:-53657336 None:intergenic
TGAAGTTTAGGCACCAACAC+TGG 0.557707 8_3:-53657647 None:intergenic
AGCATAGTCCGCGAACTCAA+GGG 0.558850 8_3:+53656265 Msa1295490:CDS
CACGAGCAAGAAGAAGAAGA+AGG 0.559457 8_3:-53655494 None:intergenic
CTTGATAATCTCTTTAGTAA+CGG 0.564764 8_3:-53656530 None:intergenic
CTATCTCAGCTATTCAGGAA+GGG 0.566111 8_3:+53657433 Msa1295490:CDS
CGAGCCAGCAACAAATATGT+TGG 0.568606 8_3:+53657090 Msa1295490:CDS
ACCTATTCAACAGGGACAGT+GGG 0.571704 8_3:+53656390 Msa1295490:CDS
GAGTCCATCGAGCCTTGGCT+CGG 0.572639 8_3:-53657582 None:intergenic
TATCTCAGCTATTCAGGAAG+GGG 0.574086 8_3:+53657434 Msa1295490:CDS
TGTTGGTGCCTAAACTTCAT+GGG 0.575598 8_3:+53657651 Msa1295490:CDS
CTCCTAATAAAGCACTGGAT+CGG 0.579253 8_3:-53656718 None:intergenic
TGGAGCTGCTCATGCCACCT+AGG 0.585203 8_3:-53657627 None:intergenic
GGCATGAGCAGCTCCAGTGT+TGG 0.585590 8_3:+53657634 Msa1295490:CDS
GGCCCTTCTTATCTTTCTGG+CGG 0.587954 8_3:-53657022 None:intergenic
GGTTGAACTGCAGCGTCAGG+TGG 0.590130 8_3:-53657261 None:intergenic
AGAAAGATAAGAAGGGCCAC+AGG 0.590973 8_3:+53657027 Msa1295490:CDS
CTGCAGCGTCAGGTGGAGGT+TGG 0.596893 8_3:-53657254 None:intergenic
AGAACCGAGCCAAGGCTCGA+TGG 0.600159 8_3:+53657578 Msa1295490:CDS
ACACCAAGAATTGGCTATGT+CGG 0.600503 8_3:+53656329 Msa1295490:CDS
GCATAGTCCGCGAACTCAAG+GGG 0.603504 8_3:+53656266 Msa1295490:CDS
AAGGCTTGGAAGGCAGAGAG+TGG 0.610317 8_3:-53657819 None:intergenic
GAGTGGGTAAGAGTAGTCCA+TGG 0.613248 8_3:-53657802 None:intergenic
ACAAATATGTTGGTAAACTG+AGG 0.614123 8_3:+53657100 Msa1295490:CDS
TTAGAATTAAGTCTTGCACT+TGG 0.614308 8_3:-53657294 None:intergenic
TATGACAAAGTCGGTGCCTG+TGG 0.616367 8_3:-53657043 None:intergenic
TAAATGCTCTCTGGACAAGA+GGG 0.617345 8_3:+53657376 Msa1295490:CDS
AGACTCCTCAGCAATGCGGA+AGG 0.618284 8_3:+53656551 Msa1295490:CDS
TATTTGAGGTAACGATGTTG+GGG 0.620267 8_3:-53657469 None:intergenic
GCTTGTCAAACAGATTGCAA+AGG 0.620286 8_3:-53657838 None:intergenic
AAAGTAAGAAGAACGAGAAG+TGG 0.622647 8_3:-53655435 None:intergenic
CTTCATGGGTCGTGTTACAG+TGG 0.629354 8_3:+53657665 Msa1295490:CDS
ACATAGCCAATTCTTGGTGT+CGG 0.630203 8_3:-53656326 None:intergenic
AACCTATTCAACAGGGACAG+TGG 0.631854 8_3:+53656389 Msa1295490:CDS
TCTCACTCTCTTCAACCCTA+CGG 0.632526 8_3:-53656447 None:intergenic
GTGATCCTTCCGCATTGCTG+AGG 0.633651 8_3:-53656556 None:intergenic
AAGTAAGAAGAACGAGAAGT+GGG 0.636222 8_3:-53655434 None:intergenic
ATCAATACAACTTATACATG+GGG 0.637552 8_3:-53658026 None:intergenic
GAGCTACCAGAACCGAGCCA+AGG 0.641949 8_3:+53657570 Msa1295490:CDS
GCGGAAGAAACATTATGAGA+CGG 0.646089 8_3:-53657726 None:intergenic
TGGAAAAGATATATTCACCA+TGG 0.647072 8_3:+53657785 Msa1295490:CDS
GCCCAAGGATATGACAAAGT+CGG 0.650298 8_3:-53657052 None:intergenic
AGGCTTGGAAGGCAGAGAGT+GGG 0.650720 8_3:-53657818 None:intergenic
CCAATTGAACCTATTCAACA+GGG 0.658968 8_3:+53656382 Msa1295490:CDS
AGCCGCCAGAAAGATAAGAA+GGG 0.660186 8_3:+53657020 Msa1295490:CDS
ATCTCAGCTATTCAGGAAGG+GGG 0.669799 8_3:+53657435 Msa1295490:CDS
CACTGGATCGGATAATCACG+AGG 0.678479 8_3:-53656706 None:intergenic
AATCACAAACACTGACACGA+CGG 0.686356 8_3:+53655240 Msa1295490:five_prime_UTR
GATTACCCTTTCTTGCTCAG+CGG 0.690765 8_3:-53657745 None:intergenic
ATGTCCAAAAGCAATTCAGG+AGG 0.691534 8_3:-53656421 None:intergenic
AACGCGATTCTCCAGAATCG+CGG 0.692412 8_3:+53655388 Msa1295490:five_prime_UTR
ATCAAGACTCCTCAGCAATG+CGG 0.693306 8_3:+53656547 Msa1295490:CDS
AAATGCTAGGCATATCCGCA+CGG 0.696473 8_3:+53657939 Msa1295490:three_prime_UTR
GATCAAAAGCTTCATCAGTG+AGG 0.715213 8_3:-53658149 None:intergenic
CTTCGGTATGTAAATCATGG+AGG 0.716243 8_3:+53656506 Msa1295490:CDS
GAATAGGTAGCATATCAAAG+CGG 0.721866 8_3:+53656299 Msa1295490:CDS
ATAGGTAGCATATCAAAGCG+GGG 0.729686 8_3:+53656301 Msa1295490:CDS
CAAACCTAAGTACAACACGA+AGG 0.754352 8_3:-53656758 None:intergenic
TCGGTGCTTGACGAACCGTG+CGG 0.787880 8_3:-53657954 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTATGTTTATTTATGT+TGG - chr8_3:53655305-53655324 None:intergenic 10.0%
!! ATTTAATATTTATTCATCAA+TGG - chr8_3:53655940-53655959 None:intergenic 10.0%
!!! ATTTTTATGTTAGTTTTAGA+TGG + chr8_3:53655704-53655723 Msa1295490:intron 15.0%
!! AATATAATCAAGGTTTATTA+TGG - chr8_3:53655831-53655850 None:intergenic 15.0%
!! ATAAGTAATGAATATAATCA+AGG - chr8_3:53655841-53655860 None:intergenic 15.0%
!! AATTTGGATTATACTAAAAA+GGG - chr8_3:53656620-53656639 None:intergenic 15.0%
!! TAATTTGGATTATACTAAAA+AGG - chr8_3:53656621-53656640 None:intergenic 15.0%
!! ATACAAAATAGAAAAAATGT+CGG - chr8_3:53656918-53656937 None:intergenic 15.0%
!! CTAAGAAGAAAAAACTAAAT+CGG - chr8_3:53655525-53655544 None:intergenic 20.0%
!! AACAATAACACTATAGAATA+CGG - chr8_3:53655550-53655569 None:intergenic 20.0%
!!! TGTTCAATTTCAGATTTTTA+TGG + chr8_3:53655610-53655629 Msa1295490:intron 20.0%
!!! ATTTCACGTTTTTTCTTTTT+TGG + chr8_3:53655635-53655654 Msa1295490:intron 20.0%
!!! TTTCACGTTTTTTCTTTTTT+GGG + chr8_3:53655636-53655655 Msa1295490:intron 20.0%
!!! ATTGCAGCATTTTAATTTTT+AGG + chr8_3:53655794-53655813 Msa1295490:intron 20.0%
!!! TAATTGTAGTTGAATTTTGA+TGG + chr8_3:53655866-53655885 Msa1295490:intron 20.0%
!! TCAAAATTCAATCTTTGATT+TGG - chr8_3:53655906-53655925 None:intergenic 20.0%
!! ATTTGGATTATACTAAAAAG+GGG - chr8_3:53656619-53656638 None:intergenic 20.0%
!! AGTATAATCCAAATTATTCT+TGG + chr8_3:53656625-53656644 Msa1295490:intron 20.0%
!! AATCAATACAACTTATACAT+GGG - chr8_3:53658030-53658049 None:intergenic 20.0%
! GAGAGAGTTATTTGAATTTA+TGG - chr8_3:53655463-53655482 None:intergenic 25.0%
! TAACCTGAATGAAGAAAAAA+TGG - chr8_3:53655582-53655601 None:intergenic 25.0%
!! AAATCTGAAATTGAACAGAA+GGG - chr8_3:53655607-53655626 None:intergenic 25.0%
!! AAAATCTGAAATTGAACAGA+AGG - chr8_3:53655608-53655627 None:intergenic 25.0%
!!! TTCACGTTTTTTCTTTTTTG+GGG + chr8_3:53655637-53655656 Msa1295490:intron 25.0%
!! CTTGATAATCTCTTTAGTAA+CGG - chr8_3:53656533-53656552 None:intergenic 25.0%
!! AAGAAGCATAAAAAACCTAA+GGG - chr8_3:53656651-53656670 None:intergenic 25.0%
!! TAAGAAGCATAAAAAACCTA+AGG - chr8_3:53656652-53656671 None:intergenic 25.0%
! CTTAAAGATGATAACTTACA+TGG - chr8_3:53656787-53656806 None:intergenic 25.0%
! AAAACATGTTGAGATTACAA+GGG - chr8_3:53657180-53657199 None:intergenic 25.0%
! AAAAACATGTTGAGATTACA+AGG - chr8_3:53657181-53657200 None:intergenic 25.0%
!!! CAACATGTTTTTTATACGTT+TGG + chr8_3:53657189-53657208 Msa1295490:intron 25.0%
! TTGTTGCATATTAAAATGCT+AGG + chr8_3:53657926-53657945 Msa1295490:three_prime_UTR 25.0%
! ATCAATACAACTTATACATG+GGG - chr8_3:53658029-53658048 None:intergenic 25.0%
! GAATCAATACAACTTATACA+TGG - chr8_3:53658031-53658050 None:intergenic 25.0%
!!! TGTATAAGTTGTATTGATTC+TGG + chr8_3:53658031-53658050 Msa1295490:three_prime_UTR 25.0%
!!! GATCCATTTTTTCTTCATTC+AGG + chr8_3:53655576-53655595 Msa1295490:five_prime_UTR 30.0%
! AATCTGAAATTGAACAGAAG+GGG - chr8_3:53655606-53655625 None:intergenic 30.0%
ATCAAGGTTTATTATGGTCA+AGG - chr8_3:53655825-53655844 None:intergenic 30.0%
!! CATGCAATGCATTTGTTATA+AGG + chr8_3:53656108-53656127 Msa1295490:intron 30.0%
!! ATTTGTTATAAGGAGCTACA+TGG + chr8_3:53656118-53656137 Msa1295490:intron 30.0%
GCTACATGGTTATATTTGTT+TGG + chr8_3:53656132-53656151 Msa1295490:intron 30.0%
!! TTTGCCTTTGTGTTTTTGTT+AGG + chr8_3:53656175-53656194 Msa1295490:intron 30.0%
TGATCCTAACAAAAACACAA+AGG - chr8_3:53656182-53656201 None:intergenic 30.0%
! TAAAGCTAGAAGCTTTTGTT+TGG + chr8_3:53656202-53656221 Msa1295490:five_prime_UTR 30.0%
ATTATGTCCAAAAGCAATTC+AGG - chr8_3:53656427-53656446 None:intergenic 30.0%
!!! TGTTGTTGTTTTTTGTGCTT+CGG + chr8_3:53656489-53656508 Msa1295490:CDS 30.0%
ATTTCCTATTTCATTGAAGC+AGG + chr8_3:53656579-53656598 Msa1295490:CDS 30.0%
ATTACCTGCTTCAATGAAAT+AGG - chr8_3:53656586-53656605 None:intergenic 30.0%
GAAATTCAACATTCATAGTC+AGG - chr8_3:53656827-53656846 None:intergenic 30.0%
ATTTATTGCGATTTAGACTG+TGG + chr8_3:53656879-53656898 Msa1295490:intron 30.0%
!! GCATTTAAGTGATCTTGTTT+TGG + chr8_3:53656950-53656969 Msa1295490:intron 30.0%
!!! TTGTTTTGGTTTTGTCGTAA+CGG + chr8_3:53656964-53656983 Msa1295490:intron 30.0%
! TTTACCAACATATTTGTTGC+TGG - chr8_3:53657097-53657116 None:intergenic 30.0%
! ACAAATATGTTGGTAAACTG+AGG + chr8_3:53657100-53657119 Msa1295490:CDS 30.0%
AGGATGAAAAGCTGATATAA+GGG - chr8_3:53657155-53657174 None:intergenic 30.0%
TAGGATGAAAAGCTGATATA+AGG - chr8_3:53657156-53657175 None:intergenic 30.0%
AAACATGTTGAGATTACAAG+GGG - chr8_3:53657179-53657198 None:intergenic 30.0%
!!! ATGTTTTTTATACGTTTGGC+AGG + chr8_3:53657193-53657212 Msa1295490:intron 30.0%
GTTGTCATATATAGCAAACT+TGG - chr8_3:53657235-53657254 None:intergenic 30.0%
TTAGAATTAAGTCTTGCACT+TGG - chr8_3:53657297-53657316 None:intergenic 30.0%
! ATATTTGAGGTAACGATGTT+GGG - chr8_3:53657473-53657492 None:intergenic 30.0%
! AATATTTGAGGTAACGATGT+TGG - chr8_3:53657474-53657493 None:intergenic 30.0%
AAAGGTTCACTGAATATTTG+AGG - chr8_3:53657486-53657505 None:intergenic 30.0%
!!! AGACTTGTTTTTAAGTACCA+AGG - chr8_3:53657607-53657626 None:intergenic 30.0%
TACTTAAAAACAAGTCTCCT+AGG + chr8_3:53657610-53657629 Msa1295490:CDS 30.0%
ATCTTACAGTTTGGAAAGAT+TGG + chr8_3:53657765-53657784 Msa1295490:CDS 30.0%
TGGAAAAGATATATTCACCA+TGG + chr8_3:53657785-53657804 Msa1295490:CDS 30.0%
TTAATATGCAACAAATCAGC+AGG - chr8_3:53657920-53657939 None:intergenic 30.0%
!!! CATAATTTCATTTTAGCTGC+AGG - chr8_3:53658084-53658103 None:intergenic 30.0%
AAGTAAGAAGAACGAGAAGT+GGG - chr8_3:53655437-53655456 None:intergenic 35.0%
AAAGTAAGAAGAACGAGAAG+TGG - chr8_3:53655438-53655457 None:intergenic 35.0%
AAGTGAGTTGCTCAATTTAG+AGG + chr8_3:53655984-53656003 Msa1295490:intron 35.0%
GTTGCTCAATTTAGAGGATT+CGG + chr8_3:53655990-53656009 Msa1295490:intron 35.0%
! AGAGGATTCGGATCTAATTT+TGG + chr8_3:53656002-53656021 Msa1295490:intron 35.0%
! GAGGATTCGGATCTAATTTT+GGG + chr8_3:53656003-53656022 Msa1295490:intron 35.0%
!! CTAGAAGCTTTTGTTTGGAT+TGG + chr8_3:53656207-53656226 Msa1295490:five_prime_UTR 35.0%
AAGGGGATGAAAAATGGAAT+AGG + chr8_3:53656283-53656302 Msa1295490:CDS 35.0%
GAATAGGTAGCATATCAAAG+CGG + chr8_3:53656299-53656318 Msa1295490:CDS 35.0%
AATAGGTAGCATATCAAAGC+GGG + chr8_3:53656300-53656319 Msa1295490:CDS 35.0%
TCCAATTGAACCTATTCAAC+AGG + chr8_3:53656381-53656400 Msa1295490:CDS 35.0%
CCAATTGAACCTATTCAACA+GGG + chr8_3:53656382-53656401 Msa1295490:CDS 35.0%
! GTTTGGCAGGTCTAATTTTT+GGG + chr8_3:53657206-53657225 Msa1295490:intron 35.0%
! TTTGGCAGGTCTAATTTTTG+GGG + chr8_3:53657207-53657226 Msa1295490:intron 35.0%
TGCAAGACTTAATTCTAAGC+AGG + chr8_3:53657299-53657318 Msa1295490:CDS 35.0%
! AGCATTTAGCTCATAGGAAA+TGG - chr8_3:53657364-53657383 None:intergenic 35.0%
TATACCTATCTCAGCTATTC+AGG + chr8_3:53657428-53657447 Msa1295490:CDS 35.0%
! TATTTGAGGTAACGATGTTG+GGG - chr8_3:53657472-53657491 None:intergenic 35.0%
TTAAAAACAAGTCTCCTAGG+TGG + chr8_3:53657613-53657632 Msa1295490:CDS 35.0%
GAAAGGGTAATCTTACAGTT+TGG + chr8_3:53657756-53657775 Msa1295490:CDS 35.0%
AATCACAAACACTGACACGA+CGG + chr8_3:53655240-53655259 Msa1295490:five_prime_UTR 40.0%
!! TCTGCTTTTGAACTCAAACG+TGG - chr8_3:53655266-53655285 None:intergenic 40.0%
! ATTCGGATCTAATTTTGGGC+TGG + chr8_3:53656007-53656026 Msa1295490:intron 40.0%
!! GAAGCTTTTGTTTGGATTGG+TGG + chr8_3:53656210-53656229 Msa1295490:five_prime_UTR 40.0%
GAACTCAAGGGGATGAAAAA+TGG + chr8_3:53656277-53656296 Msa1295490:CDS 40.0%
ATAGGTAGCATATCAAAGCG+GGG + chr8_3:53656301-53656320 Msa1295490:CDS 40.0%
! ACATAGCCAATTCTTGGTGT+CGG - chr8_3:53656329-53656348 None:intergenic 40.0%
ACACCAAGAATTGGCTATGT+CGG + chr8_3:53656329-53656348 Msa1295490:CDS 40.0%
GGTTCAATTGGAGTTACATC+CGG - chr8_3:53656373-53656392 None:intergenic 40.0%
CCCTGTTGAATAGGTTCAAT+TGG - chr8_3:53656385-53656404 None:intergenic 40.0%
! TCTACCTCCTGAATTGCTTT+TGG + chr8_3:53656417-53656436 Msa1295490:CDS 40.0%
ATGTCCAAAAGCAATTCAGG+AGG - chr8_3:53656424-53656443 None:intergenic 40.0%
! TGCTTTTGGACATAATCCGT+AGG + chr8_3:53656431-53656450 Msa1295490:CDS 40.0%
! GCTTTTGGACATAATCCGTA+GGG + chr8_3:53656432-53656451 Msa1295490:CDS 40.0%
TTGAAGAGAGTGAGACATCT+TGG + chr8_3:53656455-53656474 Msa1295490:CDS 40.0%
GTGCTTCGGTATGTAAATCA+TGG + chr8_3:53656503-53656522 Msa1295490:CDS 40.0%
CTTCGGTATGTAAATCATGG+AGG + chr8_3:53656506-53656525 Msa1295490:CDS 40.0%
CCTAAGGGCCAAGAATAATT+TGG - chr8_3:53656636-53656655 None:intergenic 40.0%
CCAAATTATTCTTGGCCCTT+AGG + chr8_3:53656633-53656652 Msa1295490:intron 40.0%
CCTTATGTGTATGAATAGCC+CGG + chr8_3:53656682-53656701 Msa1295490:intron 40.0%
! ATCCGATCCAGTGCTTTATT+AGG + chr8_3:53656716-53656735 Msa1295490:CDS 40.0%
!! CTCCTAATAAAGCACTGGAT+CGG - chr8_3:53656721-53656740 None:intergenic 40.0%
TGTTCCTCCTAATAAAGCAC+TGG - chr8_3:53656726-53656745 None:intergenic 40.0%
TCTACCTTCGTGTTGTACTT+AGG + chr8_3:53656754-53656773 Msa1295490:CDS 40.0%
CAAACCTAAGTACAACACGA+AGG - chr8_3:53656761-53656780 None:intergenic 40.0%
CTTCGTGTTGTACTTAGGTT+TGG + chr8_3:53656759-53656778 Msa1295490:CDS 40.0%
! GTTTTGTCGTAACGGTATAG+CGG + chr8_3:53656972-53656991 Msa1295490:intron 40.0%
! ACCGACTTTGTCATATCCTT+GGG + chr8_3:53657051-53657070 Msa1295490:CDS 40.0%
AGAAAAATCATCTGTGCCCA+AGG - chr8_3:53657070-53657089 None:intergenic 40.0%
! TGGTAAACTGAGGCAAGTTT+TGG + chr8_3:53657110-53657129 Msa1295490:intron 40.0%
ATGTTGAGATTACAAGGGGT+AGG - chr8_3:53657175-53657194 None:intergenic 40.0%
! CGTTTGGCAGGTCTAATTTT+TGG + chr8_3:53657205-53657224 Msa1295490:intron 40.0%
TTGTTACATGCTGGAACTCT+TGG - chr8_3:53657330-53657349 None:intergenic 40.0%
CCAACAAGATTGTTACATGC+TGG - chr8_3:53657339-53657358 None:intergenic 40.0%
CCAGCATGTAACAATCTTGT+TGG + chr8_3:53657336-53657355 Msa1295490:CDS 40.0%
TAAATGCTCTCTGGACAAGA+GGG + chr8_3:53657376-53657395 Msa1295490:CDS 40.0%
CTATCTCAGCTATTCAGGAA+GGG + chr8_3:53657433-53657452 Msa1295490:CDS 40.0%
TATCTCAGCTATTCAGGAAG+GGG + chr8_3:53657434-53657453 Msa1295490:CDS 40.0%
!!! TTTTCTTTCAGTGCTGGTGA+GGG - chr8_3:53657513-53657532 None:intergenic 40.0%
!!! TTTTTCTTTCAGTGCTGGTG+AGG - chr8_3:53657514-53657533 None:intergenic 40.0%
!!! GGACTTTTTTCTTTCAGTGC+TGG - chr8_3:53657519-53657538 None:intergenic 40.0%
! TGTTGGTGCCTAAACTTCAT+GGG + chr8_3:53657651-53657670 Msa1295490:CDS 40.0%
TAACACGACCCATGAAGTTT+AGG - chr8_3:53657662-53657681 None:intergenic 40.0%
GCGGAAGAAACATTATGAGA+CGG - chr8_3:53657729-53657748 None:intergenic 40.0%
TCAAACAGATTGCAAAGGCT+TGG - chr8_3:53657836-53657855 None:intergenic 40.0%
GCTTGTCAAACAGATTGCAA+AGG - chr8_3:53657841-53657860 None:intergenic 40.0%
GATCAAAAGCTTCATCAGTG+AGG - chr8_3:53658152-53658171 None:intergenic 40.0%
! GATTCTGGAGAATCGCGTTT+GGG - chr8_3:53655387-53655406 None:intergenic 45.0%
CACGAGCAAGAAGAAGAAGA+AGG - chr8_3:53655497-53655516 None:intergenic 45.0%
!! TTGGATTGGTGGAGTTTGCA+AGG + chr8_3:53656221-53656240 Msa1295490:five_prime_UTR 45.0%
! TTTTCATCCCCTTGAGTTCG+CGG - chr8_3:53656276-53656295 None:intergenic 45.0%
TGACCGACATAGCCAATTCT+TGG - chr8_3:53656335-53656354 None:intergenic 45.0%
GTCAAAGTCACATGTTGCTC+CGG + chr8_3:53656351-53656370 Msa1295490:CDS 45.0%
AACCTATTCAACAGGGACAG+TGG + chr8_3:53656389-53656408 Msa1295490:CDS 45.0%
ACCTATTCAACAGGGACAGT+GGG + chr8_3:53656390-53656409 Msa1295490:CDS 45.0%
TCTCACTCTCTTCAACCCTA+CGG - chr8_3:53656450-53656469 None:intergenic 45.0%
AAAACAACAACAGCACGAGC+AGG - chr8_3:53656481-53656500 None:intergenic 45.0%
ATCAAGACTCCTCAGCAATG+CGG + chr8_3:53656547-53656566 Msa1295490:CDS 45.0%
CCGGGCTATTCATACACATA+AGG - chr8_3:53656685-53656704 None:intergenic 45.0%
! CGATCCAGTGCTTTATTAGG+AGG + chr8_3:53656719-53656738 Msa1295490:CDS 45.0%
TAGCCGCCAGAAAGATAAGA+AGG + chr8_3:53657019-53657038 Msa1295490:CDS 45.0%
AGCCGCCAGAAAGATAAGAA+GGG + chr8_3:53657020-53657039 Msa1295490:CDS 45.0%
TGTGGCCCTTCTTATCTTTC+TGG - chr8_3:53657028-53657047 None:intergenic 45.0%
AGAAAGATAAGAAGGGCCAC+AGG + chr8_3:53657027-53657046 Msa1295490:CDS 45.0%
!! CACCGACTTTGTCATATCCT+TGG + chr8_3:53657050-53657069 Msa1295490:CDS 45.0%
GCCCAAGGATATGACAAAGT+CGG - chr8_3:53657055-53657074 None:intergenic 45.0%
CGAGCCAGCAACAAATATGT+TGG + chr8_3:53657090-53657109 Msa1295490:CDS 45.0%
!! CCAGAGAGCATTTAGCTCAT+AGG - chr8_3:53657370-53657389 None:intergenic 45.0%
CCTATGAGCTAAATGCTCTC+TGG + chr8_3:53657367-53657386 Msa1295490:CDS 45.0%
CTAAATGCTCTCTGGACAAG+AGG + chr8_3:53657375-53657394 Msa1295490:CDS 45.0%
ATGATGCAGTGCACTCTTCT+TGG - chr8_3:53657402-53657421 None:intergenic 45.0%
CCTTCCTGAATAGCTGAGAT+AGG - chr8_3:53657435-53657454 None:intergenic 45.0%
CCTATCTCAGCTATTCAGGA+AGG + chr8_3:53657432-53657451 Msa1295490:CDS 45.0%
ATCTCAGCTATTCAGGAAGG+GGG + chr8_3:53657435-53657454 Msa1295490:CDS 45.0%
CCAGAGTACGAATCTGTCAT+TGG - chr8_3:53657540-53657559 None:intergenic 45.0%
CCAATGACAGATTCGTACTC+TGG + chr8_3:53657537-53657556 Msa1295490:CDS 45.0%
TGAAGTTTAGGCACCAACAC+TGG - chr8_3:53657650-53657669 None:intergenic 45.0%
! GTGTTGGTGCCTAAACTTCA+TGG + chr8_3:53657650-53657669 Msa1295490:CDS 45.0%
TTTCTTCCGCTGAGCAAGAA+AGG + chr8_3:53657739-53657758 Msa1295490:CDS 45.0%
TTCTTCCGCTGAGCAAGAAA+GGG + chr8_3:53657740-53657759 Msa1295490:CDS 45.0%
GATTACCCTTTCTTGCTCAG+CGG - chr8_3:53657748-53657767 None:intergenic 45.0%
ACAGATTGCAAAGGCTTGGA+AGG - chr8_3:53657832-53657851 None:intergenic 45.0%
CTCTCATTCACAAGCAGGTT+TGG - chr8_3:53657871-53657890 None:intergenic 45.0%
AAATGCTAGGCATATCCGCA+CGG + chr8_3:53657939-53657958 Msa1295490:three_prime_UTR 45.0%
! CGATTCTGGAGAATCGCGTT+TGG - chr8_3:53655388-53655407 None:intergenic 50.0%
AACGCGATTCTCCAGAATCG+CGG + chr8_3:53655388-53655407 Msa1295490:five_prime_UTR 50.0%
TTGGTGGAGTTTGCAAGGTG+TGG + chr8_3:53656226-53656245 Msa1295490:five_prime_UTR 50.0%
AAGCATAGTCCGCGAACTCA+AGG + chr8_3:53656264-53656283 Msa1295490:CDS 50.0%
AGCATAGTCCGCGAACTCAA+GGG + chr8_3:53656265-53656284 Msa1295490:CDS 50.0%
ATCGGATAATCACGAGGACC+GGG - chr8_3:53656703-53656722 None:intergenic 50.0%
GATCGGATAATCACGAGGAC+CGG - chr8_3:53656704-53656723 None:intergenic 50.0%
CACTGGATCGGATAATCACG+AGG - chr8_3:53656709-53656728 None:intergenic 50.0%
GGCCCTTCTTATCTTTCTGG+CGG - chr8_3:53657025-53657044 None:intergenic 50.0%
! TATGACAAAGTCGGTGCCTG+TGG - chr8_3:53657046-53657065 None:intergenic 50.0%
!! TTAGGTTGAACTGCAGCGTC+AGG - chr8_3:53657267-53657286 None:intergenic 50.0%
CTTGCACTTGGTCGACGATT+AGG - chr8_3:53657285-53657304 None:intergenic 50.0%
AGGTAACGATGTTGGGGTTG+GGG - chr8_3:53657466-53657485 None:intergenic 50.0%
GAGGTAACGATGTTGGGGTT+GGG - chr8_3:53657467-53657486 None:intergenic 50.0%
TGAGGTAACGATGTTGGGGT+TGG - chr8_3:53657468-53657487 None:intergenic 50.0%
!! TCGGTTCTGGTAGCTCTGAT+AGG - chr8_3:53657566-53657585 None:intergenic 50.0%
CTTCATGGGTCGTGTTACAG+TGG + chr8_3:53657665-53657684 Msa1295490:CDS 50.0%
GAGTGGGTAAGAGTAGTCCA+TGG - chr8_3:53657805-53657824 None:intergenic 50.0%
CACAGCTCTCATTCACAAGC+AGG - chr8_3:53657876-53657895 None:intergenic 50.0%
ATTCTCCAGAATCGCGGTGG+CGG + chr8_3:53655394-53655413 Msa1295490:five_prime_UTR 55.0%
GCATAGTCCGCGAACTCAAG+GGG + chr8_3:53656266-53656285 Msa1295490:CDS 55.0%
GGGGTTCCGACACCAAGAAT+TGG + chr8_3:53656320-53656339 Msa1295490:CDS 55.0%
GCCCACTGTCCCTGTTGAAT+AGG - chr8_3:53656394-53656413 None:intergenic 55.0%
AGACTCCTCAGCAATGCGGA+AGG + chr8_3:53656551-53656570 Msa1295490:CDS 55.0%
GTGATCCTTCCGCATTGCTG+AGG - chr8_3:53656559-53656578 None:intergenic 55.0%
!! AGTGCTGGTGAGGGAGGAAA+AGG - chr8_3:53657504-53657523 None:intergenic 55.0%
!! TCTTTCAGTGCTGGTGAGGG+AGG - chr8_3:53657510-53657529 None:intergenic 55.0%
AGGCTTGGAAGGCAGAGAGT+GGG - chr8_3:53657821-53657840 None:intergenic 55.0%
AAGGCTTGGAAGGCAGAGAG+TGG - chr8_3:53657822-53657841 None:intergenic 55.0%
! CACCTGCATGCTGAAGTGCT+CGG - chr8_3:53657976-53657995 None:intergenic 55.0%
GCGATTCTCCAGAATCGCGG+TGG + chr8_3:53655391-53655410 Msa1295490:five_prime_UTR 60.0%
TGAACTGCAGCGTCAGGTGG+AGG - chr8_3:53657261-53657280 None:intergenic 60.0%
GGTTGAACTGCAGCGTCAGG+TGG - chr8_3:53657264-53657283 None:intergenic 60.0%
GAGCTACCAGAACCGAGCCA+AGG + chr8_3:53657570-53657589 Msa1295490:CDS 60.0%
!! ATCGAGCCTTGGCTCGGTTC+TGG - chr8_3:53657579-53657598 None:intergenic 60.0%
AGAACCGAGCCAAGGCTCGA+TGG + chr8_3:53657578-53657597 Msa1295490:CDS 60.0%
GAGTCCATCGAGCCTTGGCT+CGG - chr8_3:53657585-53657604 None:intergenic 60.0%
CCAAGGAGTCCATCGAGCCT+TGG - chr8_3:53657590-53657609 None:intergenic 60.0%
! CCAAGGCTCGATGGACTCCT+TGG + chr8_3:53657587-53657606 Msa1295490:CDS 60.0%
TGGAGCTGCTCATGCCACCT+AGG - chr8_3:53657630-53657649 None:intergenic 60.0%
GGCATGAGCAGCTCCAGTGT+TGG + chr8_3:53657634-53657653 Msa1295490:CDS 60.0%
! TCGGTGCTTGACGAACCGTG+CGG - chr8_3:53657957-53657976 None:intergenic 60.0%
CACCGAGCACTTCAGCATGC+AGG + chr8_3:53657971-53657990 Msa1295490:three_prime_UTR 60.0%
CTTCACCGCCACCGCGATTC+TGG - chr8_3:53655402-53655421 None:intergenic 65.0%
CTGCAGCGTCAGGTGGAGGT+TGG - chr8_3:53657257-53657276 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 53655228 53658255 53655228 ID=Msa1295490;Name=Msa1295490
chr8_3 mRNA 53655228 53658255 53655228 ID=Msa1295490-mRNA-1;Parent=Msa1295490;Name=Msa1295490-mRNA-1;_AED=0.08;_eAED=0.08;_QI=426|1|1|1|0.75|0.6|5|368|412
chr8_3 exon 53655228 53655597 53655228 ID=Msa1295490-mRNA-1:exon:15389;Parent=Msa1295490-mRNA-1
chr8_3 exon 53656197 53656600 53656197 ID=Msa1295490-mRNA-1:exon:15390;Parent=Msa1295490-mRNA-1
chr8_3 exon 53656700 53656787 53656700 ID=Msa1295490-mRNA-1:exon:15391;Parent=Msa1295490-mRNA-1
chr8_3 exon 53656992 53657121 53656992 ID=Msa1295490-mRNA-1:exon:15392;Parent=Msa1295490-mRNA-1
chr8_3 exon 53657215 53658255 53657215 ID=Msa1295490-mRNA-1:exon:15393;Parent=Msa1295490-mRNA-1
chr8_3 five_prime_UTR 53655228 53655597 53655228 ID=Msa1295490-mRNA-1:five_prime_utr;Parent=Msa1295490-mRNA-1
chr8_3 five_prime_UTR 53656197 53656252 53656197 ID=Msa1295490-mRNA-1:five_prime_utr;Parent=Msa1295490-mRNA-1
chr8_3 CDS 53656253 53656600 53656253 ID=Msa1295490-mRNA-1:cds;Parent=Msa1295490-mRNA-1
chr8_3 CDS 53656700 53656787 53656700 ID=Msa1295490-mRNA-1:cds;Parent=Msa1295490-mRNA-1
chr8_3 CDS 53656992 53657121 53656992 ID=Msa1295490-mRNA-1:cds;Parent=Msa1295490-mRNA-1
chr8_3 CDS 53657215 53657887 53657215 ID=Msa1295490-mRNA-1:cds;Parent=Msa1295490-mRNA-1
chr8_3 three_prime_UTR 53657888 53658255 53657888 ID=Msa1295490-mRNA-1:three_prime_utr;Parent=Msa1295490-mRNA-1
Gene Sequence

>Msa1295490

ATGTCATTCAAAAGCATAGTCCGCGAACTCAAGGGGATGAAAAATGGAATAGGTAGCATATCAAAGCGGGGTTCCGACACCAAGAATTGGCTATGTCGGTCAAAGTCACATGTTGCTCCGGATGTAACTCCAATTGAACCTATTCAACAGGGACAGTGGGCGAGTCTACCTCCTGAATTGCTTTTGGACATAATCCGTAGGGTTGAAGAGAGTGAGACATCTTGGCCTGCTCGTGCTGTTGTTGTTTTTTGTGCTTCGGTATGTAAATCATGGAGGTCCGTTACTAAAGAGATTATCAAGACTCCTCAGCAATGCGGAAGGATCACATTTCCTATTTCATTGAAGCAGCCCGGTCCTCGTGATTATCCGATCCAGTGCTTTATTAGGAGGAACAGAGAAACTTCTACCTTCGTGTTGTACTTAGGTTTGGTGCCATCGGAGCATGAGAGTAATAAGTTGTTGTTAGCCGCCAGAAAGATAAGAAGGGCCACAGGCACCGACTTTGTCATATCCTTGGGCACAGATGATTTTTCTCGAGCCAGCAACAAATATGTTGGTAAACTGAGGTCTAATTTTTGGGGAACCAAGTTTGCTATATATGACAACCAACCTCCACCTGACGCTGCAGTTCAACCTAATCGTCGACCAAGTGCAAGACTTAATTCTAAGCAGGTGTCACCAAGAGTTCCAGCATGTAACAATCTTGTTGGCACCATTTCCTATGAGCTAAATGCTCTCTGGACAAGAGGGCCAAGAAGAGTGCACTGCATCATGAACTCTATACCTATCTCAGCTATTCAGGAAGGGGGTATCGCCCCAACCCCAACATCGTTACCTCAAATATTCAGTGAACCTTTTCCTCCCTCACCAGCACTGAAAGAAAAAAGTCCAATGACAGATTCGTACTCTGGTTGCCTATCAGAGCTACCAGAACCGAGCCAAGGCTCGATGGACTCCTTGGTACTTAAAAACAAGTCTCCTAGGTGGCATGAGCAGCTCCAGTGTTGGTGCCTAAACTTCATGGGTCGTGTTACAGTGGCATCTGTTAAGAACTTTCAACTTGTAGCTTCTGTTGATCCGTCTCATAATGTTTCTTCCGCTGAGCAAGAAAGGGTAATCTTACAGTTTGGAAAGATTGGAAAAGATATATTCACCATGGACTACTCTTACCCACTCTCTGCCTTCCAAGCCTTTGCAATCTGTTTGACAAGCTTTGATACCAAACCTGCTTGTGAATGA

Protein sequence

>Msa1295490

MSFKSIVRELKGMKNGIGSISKRGSDTKNWLCRSKSHVAPDVTPIEPIQQGQWASLPPELLLDIIRRVEESETSWPARAVVVFCASVCKSWRSVTKEIIKTPQQCGRITFPISLKQPGPRDYPIQCFIRRNRETSTFVLYLGLVPSEHESNKLLLAARKIRRATGTDFVISLGTDDFSRASNKYVGKLRSNFWGTKFAIYDNQPPPDAAVQPNRRPSARLNSKQVSPRVPACNNLVGTISYELNALWTRGPRRVHCIMNSIPISAIQEGGIAPTPTSLPQIFSEPFPPSPALKEKSPMTDSYSGCLSELPEPSQGSMDSLVLKNKSPRWHEQLQCWCLNFMGRVTVASVKNFQLVASVDPSHNVSSAEQERVILQFGKIGKDIFTMDYSYPLSAFQAFAICLTSFDTKPACE*