Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648430 | XP_003607427.1 | 93.797 | 532 | 6 | 1 | 1 | 505 | 611 | 1142 | 0.0 | 1018 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648430 | sp|Q9M9M4|CSLD3_ARATH | 83.490 | 533 | 59 | 3 | 1 | 505 | 614 | 1145 | 0.0 | 913 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040550 | Msa0648430 | 0.804505 | 2.092219e-49 | -8.615850e-47 |
| Msa0116510 | Msa0648430 | -0.803921 | 2.767249e-49 | -8.615850e-47 |
| Msa0608050 | Msa0648430 | 0.911975 | 3.303975e-83 | -8.615850e-47 |
| Msa0608060 | Msa0648430 | 0.904937 | 7.272978e-80 | -8.615850e-47 |
| Msa0648430 | Msa0648440 | 0.899180 | 2.556390e-77 | -8.615850e-47 |
| Msa0648430 | Msa0651310 | -0.802619 | 5.147708e-49 | -8.615850e-47 |
| Msa0648430 | Msa0675010 | -0.800135 | 1.661054e-48 | -8.615850e-47 |
| Msa0648430 | Msa0690930 | 0.827568 | 1.456231e-54 | -8.615850e-47 |
| Msa0648430 | Msa0719740 | 0.818780 | 1.639505e-52 | -8.615850e-47 |
| Msa0648430 | Msa0802750 | 0.820552 | 6.458249e-53 | -8.615850e-47 |
| Msa0648430 | Msa0841060 | 0.831456 | 1.652505e-55 | -8.615850e-47 |
| Msa0648430 | Msa1004260 | -0.815389 | 9.480474e-52 | -8.615850e-47 |
| Msa0648430 | Msa1026770 | 0.818303 | 2.102925e-52 | -8.615850e-47 |
| Msa0648430 | Msa1026800 | 0.825056 | 5.770091e-54 | -8.615850e-47 |
| Msa0648430 | Msa1083130 | 0.801865 | 7.360292e-49 | -8.615850e-47 |
| Msa0648430 | Msa1127910 | 0.813027 | 3.150118e-51 | -8.615850e-47 |
| Msa0648430 | Msa1147980 | 0.802326 | 5.916970e-49 | -8.615850e-47 |
| Msa0648430 | Msa1218320 | 0.876962 | 9.194580e-69 | -8.615850e-47 |
| Msa0648430 | Msa1218360 | 0.875916 | 2.112854e-68 | -8.615850e-47 |
| Msa0648430 | Msa1265290 | 0.807155 | 5.801786e-50 | -8.615850e-47 |
| Msa0648430 | Msa1277350 | 0.803071 | 4.151807e-49 | -8.615850e-47 |
| Msa0648430 | Msa1337460 | 0.815976 | 7.015143e-52 | -8.615850e-47 |
| Msa0648430 | Msa1452090 | 0.813234 | 2.837979e-51 | -8.615850e-47 |
| Msa0173370 | Msa0648430 | -0.806534 | 7.851847e-50 | -8.615850e-47 |
| Msa0209360 | Msa0648430 | 0.835408 | 1.707680e-56 | -8.615850e-47 |
| Msa0242820 | Msa0648430 | 0.800570 | 1.354628e-48 | -8.615850e-47 |
| Msa0287660 | Msa0648430 | 0.802331 | 5.902853e-49 | -8.615850e-47 |
| Msa0553950 | Msa0648430 | 0.865799 | 4.544812e-65 | -8.615850e-47 |
| Msa0570680 | Msa0648430 | -0.825039 | 5.825551e-54 | -8.615850e-47 |
| Msa0581370 | Msa0648430 | 0.800764 | 1.236404e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648430 | MtrunA17_Chr4g0039801 | 93.797 | 532 | 6 | 1 | 1 | 505 | 611 | 1142 | 0.0 | 1018 |
| Msa0648430 | MtrunA17_Chr5g0410641 | 76.350 | 537 | 90 | 4 | 1 | 505 | 590 | 1121 | 0.0 | 841 |
| Msa0648430 | MtrunA17_Chr1g0165411 | 70.654 | 535 | 117 | 4 | 1 | 505 | 581 | 1105 | 0.0 | 768 |
| Msa0648430 | MtrunA17_Chr2g0297351 | 68.352 | 534 | 129 | 5 | 1 | 503 | 498 | 1022 | 0.0 | 764 |
| Msa0648430 | MtrunA17_Chr7g0269741 | 68.877 | 543 | 126 | 7 | 1 | 505 | 634 | 1171 | 0.0 | 749 |
| Msa0648430 | MtrunA17_Chr1g0165421 | 68.646 | 539 | 135 | 3 | 1 | 505 | 595 | 1133 | 0.0 | 749 |
| Msa0648430 | MtrunA17_Chr7g0274751 | 65.595 | 529 | 35 | 10 | 1 | 502 | 399 | 807 | 0.0 | 632 |
| Msa0648430 | MtrunA17_Chr4g0073711 | 50.568 | 528 | 201 | 11 | 1 | 491 | 517 | 1021 | 4.91e-175 | 520 |
| Msa0648430 | MtrunA17_Chr8g0352231 | 47.532 | 547 | 209 | 12 | 1 | 491 | 537 | 1061 | 1.41e-161 | 486 |
| Msa0648430 | MtrunA17_Chr2g0284211 | 47.948 | 536 | 210 | 11 | 2 | 491 | 448 | 960 | 1.55e-161 | 483 |
| Msa0648430 | MtrunA17_Chr8g0383701 | 46.350 | 548 | 214 | 12 | 1 | 491 | 555 | 1079 | 7.04e-158 | 477 |
| Msa0648430 | MtrunA17_Chr2g0296991 | 45.760 | 566 | 206 | 12 | 1 | 491 | 488 | 1027 | 2.27e-157 | 474 |
| Msa0648430 | MtrunA17_Chr1g0183381 | 47.327 | 505 | 244 | 9 | 1 | 490 | 389 | 886 | 8.21e-157 | 469 |
| Msa0648430 | MtrunA17_Chr8g0379241 | 47.672 | 537 | 207 | 12 | 2 | 491 | 463 | 972 | 9.59e-157 | 471 |
| Msa0648430 | MtrunA17_Chr3g0088821 | 47.166 | 547 | 211 | 12 | 1 | 491 | 537 | 1061 | 1.75e-155 | 470 |
| Msa0648430 | MtrunA17_Chr3g0137951 | 45.688 | 545 | 220 | 11 | 1 | 491 | 547 | 1069 | 1.28e-151 | 461 |
| Msa0648430 | MtrunA17_Chr1g0201731 | 45.126 | 554 | 225 | 11 | 1 | 498 | 557 | 1087 | 1.84e-148 | 452 |
| Msa0648430 | MtrunA17_Chr7g0267731 | 45.604 | 546 | 217 | 13 | 1 | 491 | 449 | 969 | 4.16e-148 | 449 |
| Msa0648430 | MtrunA17_Chr8g0364641 | 44.677 | 526 | 225 | 14 | 1 | 491 | 470 | 964 | 5.43e-143 | 435 |
| Msa0648430 | MtrunA17_Chr3g0078671 | 40.502 | 558 | 252 | 10 | 1 | 498 | 504 | 1041 | 1.95e-132 | 409 |
| Msa0648430 | MtrunA17_Chr3g0126641 | 62.963 | 189 | 54 | 4 | 39 | 218 | 1 | 182 | 2.35e-77 | 241 |
| Msa0648430 | MtrunA17_Chr4g0046401 | 28.287 | 502 | 290 | 12 | 1 | 481 | 277 | 729 | 1.60e-43 | 164 |
| Msa0648430 | MtrunA17_Chr3g0102541 | 26.946 | 501 | 308 | 10 | 1 | 489 | 281 | 735 | 4.41e-39 | 151 |
| Msa0648430 | MtrunA17_Chr3g0102531 | 27.364 | 497 | 300 | 13 | 1 | 485 | 280 | 727 | 5.16e-38 | 148 |
| Msa0648430 | MtrunA17_Chr2g0322371 | 25.617 | 527 | 283 | 16 | 1 | 481 | 266 | 729 | 1.69e-37 | 146 |
| Msa0648430 | MtrunA17_Chr2g0322361 | 26.763 | 482 | 297 | 15 | 1 | 463 | 276 | 720 | 1.46e-36 | 144 |
| Msa0648430 | MtrunA17_Chr4g0025201 | 24.706 | 510 | 302 | 15 | 1 | 473 | 270 | 734 | 6.43e-36 | 142 |
| Msa0648430 | MtrunA17_Chr3g0102551 | 26.781 | 407 | 228 | 9 | 1 | 395 | 291 | 639 | 2.29e-34 | 137 |
| Msa0648430 | MtrunA17_Chr2g0322351 | 26.151 | 478 | 317 | 11 | 1 | 472 | 271 | 718 | 7.84e-33 | 132 |
| Msa0648430 | MtrunA17_Chr3g0077511 | 23.158 | 475 | 323 | 11 | 1 | 467 | 253 | 693 | 3.13e-32 | 130 |
| Msa0648430 | MtrunA17_Chr1g0186381 | 24.145 | 497 | 320 | 13 | 1 | 483 | 277 | 730 | 1.27e-31 | 129 |
| Msa0648430 | MtrunA17_Chr2g0298581 | 22.766 | 470 | 327 | 10 | 1 | 466 | 253 | 690 | 8.13e-30 | 123 |
| Msa0648430 | MtrunA17_Chr3g0095791 | 23.640 | 478 | 313 | 13 | 1 | 466 | 252 | 689 | 6.39e-29 | 120 |
| Msa0648430 | MtrunA17_Chr0c03g0490021 | 43.548 | 124 | 68 | 1 | 336 | 459 | 1 | 122 | 3.15e-28 | 109 |
| Msa0648430 | MtrunA17_Chr2g0307191 | 23.679 | 473 | 321 | 12 | 1 | 467 | 253 | 691 | 4.45e-27 | 115 |
| Msa0648430 | MtrunA17_Chr8g0355061 | 61.404 | 57 | 22 | 0 | 336 | 392 | 1 | 57 | 3.76e-19 | 81.3 |
| Msa0648430 | MtrunA17_Chr2g0322331 | 25.869 | 259 | 174 | 6 | 216 | 463 | 100 | 351 | 5.05e-16 | 79.7 |
| Msa0648430 | MtrunA17_Chr7g0252781 | 60.377 | 53 | 21 | 0 | 439 | 491 | 19 | 71 | 7.17e-15 | 70.1 |
| Msa0648430 | MtrunA17_Chr2g0322341 | 43.478 | 69 | 38 | 1 | 1 | 68 | 275 | 343 | 1.54e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0648430 | AT3G03050.1 | 83.490 | 533 | 59 | 3 | 1 | 505 | 614 | 1145 | 0.0 | 913 |
| Msa0648430 | AT5G16910.1 | 81.767 | 532 | 67 | 3 | 1 | 505 | 617 | 1145 | 0.0 | 894 |
| Msa0648430 | AT2G33100.2 | 68.165 | 534 | 131 | 4 | 1 | 500 | 505 | 1033 | 0.0 | 763 |
| Msa0648430 | AT2G33100.1 | 68.165 | 534 | 131 | 4 | 1 | 500 | 505 | 1033 | 0.0 | 763 |
| Msa0648430 | AT1G02730.1 | 68.613 | 548 | 121 | 7 | 1 | 505 | 642 | 1181 | 0.0 | 755 |
| Msa0648430 | AT4G38190.1 | 70.713 | 519 | 106 | 4 | 1 | 491 | 592 | 1092 | 0.0 | 755 |
| Msa0648430 | AT1G32180.1 | 62.477 | 533 | 162 | 6 | 1 | 502 | 451 | 976 | 0.0 | 681 |
| Msa0648430 | AT1G32180.2 | 62.477 | 533 | 162 | 6 | 1 | 502 | 451 | 976 | 0.0 | 681 |
| Msa0648430 | AT5G17420.1 | 48.393 | 529 | 212 | 11 | 1 | 491 | 504 | 1009 | 1.10e-168 | 503 |
| Msa0648430 | AT5G05170.1 | 48.901 | 546 | 202 | 12 | 1 | 491 | 525 | 1048 | 4.68e-166 | 498 |
| Msa0648430 | AT5G44030.3 | 45.375 | 573 | 210 | 11 | 1 | 491 | 202 | 753 | 4.84e-162 | 478 |
| Msa0648430 | AT5G64740.1 | 45.719 | 549 | 217 | 10 | 1 | 491 | 542 | 1067 | 4.57e-161 | 485 |
| Msa0648430 | AT2G25540.1 | 48.352 | 546 | 204 | 15 | 1 | 491 | 521 | 1043 | 2.40e-160 | 483 |
| Msa0648430 | AT5G09870.1 | 45.788 | 546 | 218 | 10 | 1 | 491 | 530 | 1052 | 7.76e-160 | 482 |
| Msa0648430 | AT5G44030.1 | 45.375 | 573 | 210 | 11 | 1 | 491 | 481 | 1032 | 1.11e-158 | 478 |
| Msa0648430 | AT4G18780.1 | 48.237 | 539 | 207 | 13 | 2 | 491 | 451 | 966 | 3.08e-158 | 475 |
| Msa0648430 | AT5G44030.2 | 45.375 | 573 | 210 | 11 | 1 | 491 | 510 | 1061 | 3.71e-158 | 478 |
| Msa0648430 | AT2G21770.1 | 45.225 | 555 | 218 | 11 | 1 | 496 | 548 | 1075 | 4.96e-158 | 478 |
| Msa0648430 | AT4G32410.1 | 47.339 | 545 | 211 | 12 | 1 | 491 | 541 | 1063 | 1.09e-156 | 474 |
| Msa0648430 | AT4G39350.1 | 44.241 | 547 | 226 | 10 | 1 | 491 | 543 | 1066 | 2.38e-144 | 442 |
| Msa0648430 | AT2G32530.1 | 29.204 | 452 | 267 | 14 | 1 | 427 | 274 | 697 | 2.42e-43 | 164 |
| Msa0648430 | AT2G32610.1 | 28.516 | 512 | 300 | 19 | 1 | 481 | 275 | 751 | 4.64e-42 | 160 |
| Msa0648430 | AT2G32620.4 | 27.668 | 506 | 309 | 17 | 1 | 480 | 178 | 652 | 1.02e-41 | 158 |
| Msa0648430 | AT2G32620.1 | 27.668 | 506 | 309 | 17 | 1 | 480 | 274 | 748 | 2.02e-41 | 158 |
| Msa0648430 | AT4G15320.3 | 28.317 | 505 | 280 | 18 | 1 | 465 | 274 | 736 | 9.00e-39 | 150 |
| Msa0648430 | AT4G15320.5 | 28.317 | 505 | 280 | 18 | 1 | 465 | 274 | 736 | 9.64e-39 | 150 |
| Msa0648430 | AT4G15320.4 | 28.317 | 505 | 280 | 18 | 1 | 465 | 289 | 751 | 9.88e-39 | 150 |
| Msa0648430 | AT4G15290.1 | 27.074 | 458 | 266 | 14 | 1 | 428 | 274 | 693 | 2.47e-38 | 149 |
| Msa0648430 | AT2G32540.1 | 27.955 | 440 | 275 | 13 | 1 | 422 | 274 | 689 | 2.92e-36 | 143 |
| Msa0648430 | AT1G55850.1 | 26.176 | 489 | 295 | 13 | 1 | 480 | 289 | 720 | 4.77e-35 | 139 |
| Msa0648430 | AT2G32620.3 | 29.577 | 355 | 211 | 12 | 1 | 346 | 274 | 598 | 4.85e-35 | 139 |
| Msa0648430 | AT4G15320.2 | 28.453 | 362 | 198 | 14 | 5 | 347 | 324 | 643 | 3.80e-29 | 122 |
| Msa0648430 | AT4G15320.1 | 28.453 | 362 | 198 | 14 | 5 | 347 | 367 | 686 | 4.04e-29 | 122 |
| Msa0648430 | AT2G32620.2 | 29.520 | 271 | 165 | 8 | 1 | 268 | 274 | 521 | 3.06e-26 | 112 |
| Msa0648430 | AT4G24000.2 | 46.729 | 107 | 54 | 2 | 1 | 106 | 83 | 187 | 1.56e-22 | 101 |
| Msa0648430 | AT4G24000.2 | 23.105 | 277 | 199 | 6 | 215 | 483 | 252 | 522 | 6.52e-17 | 84.0 |
| Msa0648430 | AT4G24010.1 | 47.706 | 109 | 50 | 3 | 1 | 106 | 285 | 389 | 1.57e-22 | 102 |
| Msa0648430 | AT4G24010.1 | 27.727 | 220 | 155 | 2 | 215 | 430 | 454 | 673 | 2.22e-18 | 89.0 |
| Msa0648430 | AT4G24000.1 | 46.729 | 107 | 54 | 2 | 1 | 106 | 275 | 379 | 2.16e-22 | 101 |
| Msa0648430 | AT4G24000.1 | 23.105 | 277 | 199 | 6 | 215 | 483 | 444 | 714 | 8.19e-17 | 84.0 |
| Msa0648430 | AT4G23990.2 | 44.660 | 103 | 56 | 1 | 1 | 102 | 90 | 192 | 2.64e-20 | 94.4 |
| Msa0648430 | AT4G23990.2 | 28.704 | 216 | 148 | 4 | 215 | 425 | 259 | 473 | 1.08e-18 | 89.4 |
| Msa0648430 | AT4G23990.1 | 44.660 | 103 | 56 | 1 | 1 | 102 | 304 | 406 | 3.75e-20 | 94.7 |
| Msa0648430 | AT4G23990.1 | 28.704 | 216 | 148 | 4 | 215 | 425 | 473 | 687 | 1.76e-18 | 89.4 |
Find 131 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACAATTCTCGAAGAAATT+TGG | 0.083180 | 4_3:-54895488 | Msa0648430:CDS |
| TTTAGAAGGTTTGCTCTTTA+TGG | 0.101361 | 4_3:-54895656 | Msa0648430:CDS |
| TAGTGCCCTGTTCTCTTCTA+AGG | 0.248773 | 4_3:+54895550 | None:intergenic |
| CACAATTCTCGAAGAAATTT+GGG | 0.254749 | 4_3:-54895487 | Msa0648430:CDS |
| CTGAAGAAATTTCATTCTTC+GGG | 0.263526 | 4_3:+54895048 | None:intergenic |
| TTTCTTCAGTTTCTGGGTCT+TGG | 0.298421 | 4_3:-54894522 | Msa0648430:CDS |
| ATGGATAAATTCCAACATTA+AGG | 0.302386 | 4_3:+54895014 | None:intergenic |
| CCTCAAACCTTTGAGGGAAT+TGG | 0.310418 | 4_3:+54895789 | None:intergenic |
| CAGTCGAGGTTAAGTATAAA+AGG | 0.311934 | 4_3:+54895896 | None:intergenic |
| TCTGAAGAAATTTCATTCTT+CGG | 0.312803 | 4_3:+54895047 | None:intergenic |
| GGTGGAGAAATGAGCAGTTT+TGG | 0.320474 | 4_3:-54894814 | Msa0648430:CDS |
| CATCTAGCTGCCGTGCTTCA+AGG | 0.325137 | 4_3:-54894770 | Msa0648430:CDS |
| GAAAGATGCGCGGTCTTCTT+TGG | 0.328423 | 4_3:+54895616 | None:intergenic |
| CTTTCTGTAGTTGTTGCTTT+GGG | 0.345629 | 4_3:-54895598 | Msa0648430:CDS |
| ATCATGATGGTGAACTTAAT+AGG | 0.347488 | 4_3:-54894614 | Msa0648430:CDS |
| CCTGCACTGTCCCTCTTCTC+TGG | 0.348700 | 4_3:-54894956 | Msa0648430:CDS |
| GGCTCTAACCAATGCATTCA+TGG | 0.354035 | 4_3:+54895940 | None:intergenic |
| GAACCGGCTGTCTGTTTAGA+AGG | 0.363424 | 4_3:-54895670 | Msa0648430:CDS |
| CCACTGGAATTGAGTCAATA+AGG | 0.376702 | 4_3:+54895453 | None:intergenic |
| TCTTTCTGTAGTTGTTGCTT+TGG | 0.377041 | 4_3:-54895599 | Msa0648430:CDS |
| ACTGGAATGAACCGCCTATC+TGG | 0.380979 | 4_3:+54894363 | None:intergenic |
| TTCACCTTGACTTCAAAATC+TGG | 0.386447 | 4_3:-54894713 | Msa0648430:CDS |
| CAATCATCATATCACTCCTC+TGG | 0.393066 | 4_3:-54894415 | Msa0648430:CDS |
| CCACAGTGGAGCCGGTTACT+AGG | 0.393714 | 4_3:-54894551 | Msa0648430:CDS |
| CATACCTTCCCTCATTGCTT+TGG | 0.393894 | 4_3:+54895853 | None:intergenic |
| GGTTTACTCAAAGTCGTTGC+AGG | 0.397549 | 4_3:-54894749 | Msa0648430:CDS |
| GGTTGCATCAGGTTCTTAGA+TGG | 0.399286 | 4_3:-54895123 | Msa0648430:CDS |
| TTCACCATCATGATTACAAT+TGG | 0.413824 | 4_3:+54894623 | None:intergenic |
| TTACAATTGGTGGTATCATA+AGG | 0.426130 | 4_3:+54894636 | None:intergenic |
| CCTGTTCTCTTCTAAGGTGT+TGG | 0.427369 | 4_3:+54895556 | None:intergenic |
| TGAGCTATCATCATGGGAAC+TGG | 0.437270 | 4_3:+54894345 | None:intergenic |
| CAACCTATCCGTGAGATTGA+TGG | 0.449184 | 4_3:+54895141 | None:intergenic |
| CCAACACCTTAGAAGAGAAC+AGG | 0.451641 | 4_3:-54895556 | Msa0648430:CDS |
| GGCCCAGTCTATGTAGGAAC+CGG | 0.456340 | 4_3:-54895686 | Msa0648430:CDS |
| TTGCTGTGCTTGAAATTAAG+TGG | 0.463935 | 4_3:-54894859 | Msa0648430:CDS |
| GTTAACATGAGAGCCCTTGA+TGG | 0.465182 | 4_3:-54895716 | Msa0648430:CDS |
| AGAGCCCTTGATGGACTTCA+AGG | 0.467889 | 4_3:-54895707 | Msa0648430:CDS |
| AGAAAACACCTCCTAGTAAC+CGG | 0.477643 | 4_3:+54894540 | None:intergenic |
| TCAATACCCTCAAACCTTTG+AGG | 0.479344 | 4_3:+54895782 | None:intergenic |
| CAGGTTCTTAGATGGGCTAC+TGG | 0.479590 | 4_3:-54895115 | Msa0648430:CDS |
| CAGCCGGTTCCTACATAGAC+TGG | 0.480738 | 4_3:+54895683 | None:intergenic |
| CTACCTTGGAACTGTGCCAC+TGG | 0.489823 | 4_3:+54895437 | None:intergenic |
| CAATTCCCTCAAAGGTTTGA+GGG | 0.496074 | 4_3:-54895788 | Msa0648430:CDS |
| AGAGAACAGGGCACTAAGGA+TGG | 0.496324 | 4_3:-54895543 | Msa0648430:CDS |
| CAATACCCTCAAACCTTTGA+GGG | 0.496350 | 4_3:+54895783 | None:intergenic |
| CCAATTCCCTCAAAGGTTTG+AGG | 0.503080 | 4_3:-54895789 | Msa0648430:CDS |
| TACAATTGGTGGTATCATAA+GGG | 0.503244 | 4_3:+54894637 | None:intergenic |
| AGGATAGCATACCTTAATGT+TGG | 0.504124 | 4_3:-54895025 | Msa0648430:CDS |
| CGAGGTATAGTGAGAGCACC+AGG | 0.517290 | 4_3:+54895374 | None:intergenic |
| CCTATCTGGTCTGTACCGGC+TGG | 0.517796 | 4_3:+54894377 | None:intergenic |
| GATCAGCAAGTGGCCTACCT+TGG | 0.525030 | 4_3:+54895423 | None:intergenic |
| CCAGAGAAGAGGGACAGTGC+AGG | 0.528514 | 4_3:+54894956 | None:intergenic |
| AACCTATCCGTGAGATTGAT+GGG | 0.531225 | 4_3:+54895142 | None:intergenic |
| GAATGCATTGGTTAGAGCCT+CGG | 0.531865 | 4_3:-54895936 | Msa0648430:CDS |
| AGAAGAGGGACAGTGCAGGC+AGG | 0.535477 | 4_3:+54894960 | None:intergenic |
| TCTCACGGATAGGTTGCATC+AGG | 0.535855 | 4_3:-54895134 | Msa0648430:CDS |
| GGAAGGTATGTGCTTTATGA+TGG | 0.536478 | 4_3:-54895840 | Msa0648430:CDS |
| ACCATCATGATTACAATTGG+TGG | 0.537501 | 4_3:+54894626 | None:intergenic |
| CTGATCTGTATATTGTCAAA+TGG | 0.537846 | 4_3:-54894664 | Msa0648430:CDS |
| TAGAAGAGAACAGGGCACTA+AGG | 0.538422 | 4_3:-54895547 | Msa0648430:CDS |
| AACTTAATAGGAATAGCTGT+TGG | 0.540597 | 4_3:-54894602 | Msa0648430:CDS |
| ATCTGGTCTGTACCGGCTGG+TGG | 0.543265 | 4_3:+54894380 | None:intergenic |
| CTGGGCCTTGAAGTCCATCA+AGG | 0.544862 | 4_3:+54895702 | None:intergenic |
| ACTAAATGTGACGCCTTCCG+CGG | 0.545384 | 4_3:-54895172 | Msa0648430:CDS |
| GAAGAATGAAATTTCTTCAG+AGG | 0.551800 | 4_3:-54895045 | Msa0648430:CDS |
| TAAGTGGCTAGGAATTGAGC+TGG | 0.552221 | 4_3:-54894843 | Msa0648430:CDS |
| TAACCGGCTCCACTGTGGTA+TGG | 0.552785 | 4_3:+54894556 | None:intergenic |
| GTTGCATCAGGTTCTTAGAT+GGG | 0.553071 | 4_3:-54895122 | Msa0648430:CDS |
| GCTATGTCCAATTCCCTCAA+AGG | 0.554919 | 4_3:-54895796 | Msa0648430:CDS |
| AAAGGTTTGATGGGAAGAAG+AGG | 0.558986 | 4_3:-54894479 | Msa0648430:CDS |
| CCAGCCGGTACAGACCAGAT+AGG | 0.559093 | 4_3:-54894377 | Msa0648430:CDS |
| CTTCAAGGCCCAGTCTATGT+AGG | 0.559242 | 4_3:-54895692 | Msa0648430:CDS |
| AAGGTTTGATGGGAAGAAGA+GGG | 0.561777 | 4_3:-54894478 | Msa0648430:CDS |
| CAATGAACTGTCCAGAGAAG+AGG | 0.562988 | 4_3:+54894945 | None:intergenic |
| GCGCGGTCTTCTTTGGCGCG+TGG | 0.563034 | 4_3:+54895623 | None:intergenic |
| GTTAAGTATAAAAGGACCGT+TGG | 0.563607 | 4_3:+54895904 | None:intergenic |
| GGTTATAGGATGCATAATAG+AGG | 0.564782 | 4_3:-54895217 | Msa0648430:intron |
| ATATAACTCCAAAGCAATGA+GGG | 0.569533 | 4_3:-54895861 | Msa0648430:CDS |
| AATCATCATATCACTCCTCT+GGG | 0.574992 | 4_3:-54894414 | Msa0648430:CDS |
| GTACCATACCACAGTGGAGC+CGG | 0.578048 | 4_3:-54894559 | Msa0648430:CDS |
| ATAGGATGCATAATAGAGGA+TGG | 0.578268 | 4_3:-54895213 | Msa0648430:intron |
| GATGGGAGCAGTTCCGCGGA+AGG | 0.581406 | 4_3:+54895159 | None:intergenic |
| AAGAAATTTCATTCTTCGGG+TGG | 0.585093 | 4_3:+54895051 | None:intergenic |
| AATGAACTGTCCAGAGAAGA+GGG | 0.585838 | 4_3:+54894946 | None:intergenic |
| ATTCCAGTGGCACAGTTCCA+AGG | 0.587403 | 4_3:-54895440 | Msa0648430:CDS |
| AACTGCTCCCATCAATCTCA+CGG | 0.588236 | 4_3:-54895149 | Msa0648430:CDS |
| TAGGAATTGAGCTGGAAGAA+TGG | 0.588669 | 4_3:-54894835 | Msa0648430:CDS |
| CGGTCTTCTTTGGCGCGTGG+AGG | 0.588737 | 4_3:+54895626 | None:intergenic |
| GCCTCGGCTGTCATGTCCAA+CGG | 0.589027 | 4_3:-54895920 | Msa0648430:CDS |
| GTGCTTGAAATTAAGTGGCT+AGG | 0.594938 | 4_3:-54894854 | Msa0648430:CDS |
| TATATAACTCCAAAGCAATG+AGG | 0.595884 | 4_3:-54895862 | Msa0648430:CDS |
| GAGAACAGGGCACTAAGGAT+GGG | 0.596261 | 4_3:-54895542 | Msa0648430:CDS |
| ACCGCCTATCTGGTCTGTAC+CGG | 0.600209 | 4_3:+54894373 | None:intergenic |
| AACTCCAAAGCAATGAGGGA+AGG | 0.600336 | 4_3:-54895857 | Msa0648430:CDS |
| CCATCAGTGTGATTTCATGT+TGG | 0.602601 | 4_3:-54895319 | Msa0648430:intron |
| CCAACATGAAATCACACTGA+TGG | 0.603494 | 4_3:+54895319 | None:intergenic |
| CAGTGGCACAGTTCCAAGGT+AGG | 0.604559 | 4_3:-54895436 | Msa0648430:CDS |
| GTTTGATGGGAAGAAGAGGG+AGG | 0.608204 | 4_3:-54894475 | Msa0648430:CDS |
| GTGATTAGCATATCTATCAG+AGG | 0.610027 | 4_3:+54895757 | None:intergenic |
| CATGTTAACATCAAAGAAGA+CGG | 0.610600 | 4_3:+54895730 | None:intergenic |
| ACCTTGACTTCAAAATCTGG+CGG | 0.612483 | 4_3:-54894710 | Msa0648430:CDS |
| AGCCGGTTCCTACATAGACT+GGG | 0.616227 | 4_3:+54895684 | None:intergenic |
| TGGGCCTTGAAGTCCATCAA+GGG | 0.617779 | 4_3:+54895703 | None:intergenic |
| AAACCTTCTAAACAGACAGC+CGG | 0.619310 | 4_3:+54895667 | None:intergenic |
| TTTGAGTAAACCTTGAAGCA+CGG | 0.620499 | 4_3:+54894760 | None:intergenic |
| GTGGCTATCAATCCACCAGC+CGG | 0.620559 | 4_3:-54894392 | Msa0648430:CDS |
| TGTTGGGGCCATGAATGCAT+TGG | 0.621110 | 4_3:-54895948 | None:intergenic |
| CTCCCATCAATCTCACGGAT+AGG | 0.622603 | 4_3:-54895144 | Msa0648430:CDS |
| GAATTGAGCTGGAAGAATGG+TGG | 0.623652 | 4_3:-54894832 | Msa0648430:CDS |
| CCTTATTGACTCAATTCCAG+TGG | 0.630704 | 4_3:-54895453 | Msa0648430:CDS |
| TGATTAGCATATCTATCAGA+GGG | 0.632288 | 4_3:+54895758 | None:intergenic |
| GAGGGAATTGGACATAGCAG+AGG | 0.637180 | 4_3:+54895801 | None:intergenic |
| ACCACCAATTGTAATCATGA+TGG | 0.637448 | 4_3:-54894627 | Msa0648430:CDS |
| CAACACCTTAGAAGAGAACA+GGG | 0.644827 | 4_3:-54895555 | Msa0648430:CDS |
| ATATATAGTGATCACAGTCG+AGG | 0.658364 | 4_3:+54895882 | None:intergenic |
| GATTGATGGGAGCAGTTCCG+CGG | 0.664180 | 4_3:+54895155 | None:intergenic |
| ACAGCAGGATGATCAGCAAG+TGG | 0.664216 | 4_3:+54895413 | None:intergenic |
| GATGCATCAAGCAGCTCACG+AGG | 0.667606 | 4_3:+54895356 | None:intergenic |
| CAGTGGAGCCGGTTACTAGG+AGG | 0.676084 | 4_3:-54894548 | Msa0648430:CDS |
| ACCGTTGGACATGACAGCCG+AGG | 0.677629 | 4_3:+54895919 | None:intergenic |
| CATCATATCACTCCTCTGGG+TGG | 0.679038 | 4_3:-54894411 | Msa0648430:CDS |
| GTGTCACAGTAATAGCCAAG+AGG | 0.689192 | 4_3:+54894891 | None:intergenic |
| GCCGGTACAGACCAGATAGG+CGG | 0.695938 | 4_3:-54894374 | Msa0648430:CDS |
| ATGTGCTTTATGATGGATCG+TGG | 0.700304 | 4_3:-54895833 | Msa0648430:CDS |
| GCTGCTTGATGCATCAACTG+TGG | 0.710663 | 4_3:-54895348 | Msa0648430:CDS |
| AACAACTACAGAAAGATGCG+CGG | 0.723770 | 4_3:+54895606 | None:intergenic |
| CCTAGTAACCGGCTCCACTG+TGG | 0.726079 | 4_3:+54894551 | None:intergenic |
| TGCTTTATGATGGATCGTGG+TGG | 0.732320 | 4_3:-54895830 | Msa0648430:CDS |
| GTGGATTGATAGCCACCCAG+AGG | 0.737395 | 4_3:+54894399 | None:intergenic |
| GGTATAGTGAGAGCACCAGG+AGG | 0.763552 | 4_3:+54895377 | None:intergenic |
| TATACAGTACCATACCACAG+TGG | 0.801436 | 4_3:-54894565 | Msa0648430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTCTAAAAACAATGCAATTA+TGG | - | chr4_3:54895219-54895238 | Msa0648430:intron | 25.0% |
| ! | TCTGAAGAAATTTCATTCTT+CGG | + | chr4_3:54895249-54895268 | None:intergenic | 25.0% |
| ! | ATGGATAAATTCCAACATTA+AGG | + | chr4_3:54895282-54895301 | None:intergenic | 25.0% |
| ! | ATAAGAAAAAACGAAGTGAA+TGG | + | chr4_3:54895301-54895320 | None:intergenic | 25.0% |
| !! | CTCTAAAAACAATGCAATTA+TGG | - | chr4_3:54895219-54895238 | Msa0648430:intron | 25.0% |
| ! | TCTGAAGAAATTTCATTCTT+CGG | + | chr4_3:54895249-54895268 | None:intergenic | 25.0% |
| ! | ATGGATAAATTCCAACATTA+AGG | + | chr4_3:54895282-54895301 | None:intergenic | 25.0% |
| ! | ATAAGAAAAAACGAAGTGAA+TGG | + | chr4_3:54895301-54895320 | None:intergenic | 25.0% |
| TATATAACTCCAAAGCAATG+AGG | - | chr4_3:54894431-54894450 | Msa0648430:CDS | 30.0% | |
| ATATAACTCCAAAGCAATGA+GGG | - | chr4_3:54894432-54894451 | Msa0648430:CDS | 30.0% | |
| TGATTAGCATATCTATCAGA+GGG | + | chr4_3:54894538-54894557 | None:intergenic | 30.0% | |
| CATGTTAACATCAAAGAAGA+CGG | + | chr4_3:54894566-54894585 | None:intergenic | 30.0% | |
| ! | TTTAGAAGGTTTGCTCTTTA+TGG | - | chr4_3:54894637-54894656 | Msa0648430:CDS | 30.0% |
| TCACAATTCTCGAAGAAATT+TGG | - | chr4_3:54894805-54894824 | Msa0648430:CDS | 30.0% | |
| CACAATTCTCGAAGAAATTT+GGG | - | chr4_3:54894806-54894825 | Msa0648430:CDS | 30.0% | |
| CTGAAGAAATTTCATTCTTC+GGG | + | chr4_3:54895248-54895267 | None:intergenic | 30.0% | |
| GAAGAATGAAATTTCTTCAG+AGG | - | chr4_3:54895248-54895267 | Msa0648430:intron | 30.0% | |
| CTGATCTGTATATTGTCAAA+TGG | - | chr4_3:54895629-54895648 | Msa0648430:CDS | 30.0% | |
| ! | TACAATTGGTGGTATCATAA+GGG | + | chr4_3:54895659-54895678 | None:intergenic | 30.0% |
| ! | TTACAATTGGTGGTATCATA+AGG | + | chr4_3:54895660-54895679 | None:intergenic | 30.0% |
| TTCACCATCATGATTACAAT+TGG | + | chr4_3:54895673-54895692 | None:intergenic | 30.0% | |
| ! | ATCATGATGGTGAACTTAAT+AGG | - | chr4_3:54895679-54895698 | Msa0648430:CDS | 30.0% |
| AACTTAATAGGAATAGCTGT+TGG | - | chr4_3:54895691-54895710 | Msa0648430:CDS | 30.0% | |
| TATATAACTCCAAAGCAATG+AGG | - | chr4_3:54894431-54894450 | Msa0648430:CDS | 30.0% | |
| ATATAACTCCAAAGCAATGA+GGG | - | chr4_3:54894432-54894451 | Msa0648430:CDS | 30.0% | |
| TGATTAGCATATCTATCAGA+GGG | + | chr4_3:54894538-54894557 | None:intergenic | 30.0% | |
| CATGTTAACATCAAAGAAGA+CGG | + | chr4_3:54894566-54894585 | None:intergenic | 30.0% | |
| ! | TTTAGAAGGTTTGCTCTTTA+TGG | - | chr4_3:54894637-54894656 | Msa0648430:CDS | 30.0% |
| TCACAATTCTCGAAGAAATT+TGG | - | chr4_3:54894805-54894824 | Msa0648430:CDS | 30.0% | |
| CACAATTCTCGAAGAAATTT+GGG | - | chr4_3:54894806-54894825 | Msa0648430:CDS | 30.0% | |
| CTGAAGAAATTTCATTCTTC+GGG | + | chr4_3:54895248-54895267 | None:intergenic | 30.0% | |
| GAAGAATGAAATTTCTTCAG+AGG | - | chr4_3:54895248-54895267 | Msa0648430:intron | 30.0% | |
| CTGATCTGTATATTGTCAAA+TGG | - | chr4_3:54895629-54895648 | Msa0648430:CDS | 30.0% | |
| ! | TACAATTGGTGGTATCATAA+GGG | + | chr4_3:54895659-54895678 | None:intergenic | 30.0% |
| ! | TTACAATTGGTGGTATCATA+AGG | + | chr4_3:54895660-54895679 | None:intergenic | 30.0% |
| TTCACCATCATGATTACAAT+TGG | + | chr4_3:54895673-54895692 | None:intergenic | 30.0% | |
| ! | ATCATGATGGTGAACTTAAT+AGG | - | chr4_3:54895679-54895698 | Msa0648430:CDS | 30.0% |
| AACTTAATAGGAATAGCTGT+TGG | - | chr4_3:54895691-54895710 | Msa0648430:CDS | 30.0% | |
| GTTAAGTATAAAAGGACCGT+TGG | + | chr4_3:54894392-54894411 | None:intergenic | 35.0% | |
| CAGTCGAGGTTAAGTATAAA+AGG | + | chr4_3:54894400-54894419 | None:intergenic | 35.0% | |
| ATATATAGTGATCACAGTCG+AGG | + | chr4_3:54894414-54894433 | None:intergenic | 35.0% | |
| GTGATTAGCATATCTATCAG+AGG | + | chr4_3:54894539-54894558 | None:intergenic | 35.0% | |
| ! | TCTTTCTGTAGTTGTTGCTT+TGG | - | chr4_3:54894694-54894713 | Msa0648430:CDS | 35.0% |
| !! | CTTTCTGTAGTTGTTGCTTT+GGG | - | chr4_3:54894695-54894714 | Msa0648430:CDS | 35.0% |
| TGTGATTTCATGTTGGTATG+AGG | - | chr4_3:54894981-54895000 | Msa0648430:CDS | 35.0% | |
| GGTTATAGGATGCATAATAG+AGG | - | chr4_3:54895076-54895095 | Msa0648430:CDS | 35.0% | |
| ATAGGATGCATAATAGAGGA+TGG | - | chr4_3:54895080-54895099 | Msa0648430:CDS | 35.0% | |
| AAGAAATTTCATTCTTCGGG+TGG | + | chr4_3:54895245-54895264 | None:intergenic | 35.0% | |
| AGGATAGCATACCTTAATGT+TGG | - | chr4_3:54895268-54895287 | Msa0648430:intron | 35.0% | |
| AAAAAGTGACATCGAGAGTT+TGG | + | chr4_3:54895375-54895394 | None:intergenic | 35.0% | |
| !!! | AACTCTCGATGTCACTTTTT+TGG | - | chr4_3:54895375-54895394 | Msa0648430:CDS | 35.0% |
| TTGCTGTGCTTGAAATTAAG+TGG | - | chr4_3:54895434-54895453 | Msa0648430:CDS | 35.0% | |
| !!! | AATGAGCAGTTTTGGTTCAT+TGG | - | chr4_3:54895487-54895506 | Msa0648430:CDS | 35.0% |
| TTTGAGTAAACCTTGAAGCA+CGG | + | chr4_3:54895536-54895555 | None:intergenic | 35.0% | |
| TTCACCTTGACTTCAAAATC+TGG | - | chr4_3:54895580-54895599 | Msa0648430:CDS | 35.0% | |
| ACCACCAATTGTAATCATGA+TGG | - | chr4_3:54895666-54895685 | Msa0648430:CDS | 35.0% | |
| ACCATCATGATTACAATTGG+TGG | + | chr4_3:54895670-54895689 | None:intergenic | 35.0% | |
| ! | AGGTGTTTTCTTCAGTTTCT+GGG | - | chr4_3:54895765-54895784 | Msa0648430:CDS | 35.0% |
| ! | CATCTCTATCCTTTTGCAAA+AGG | - | chr4_3:54895796-54895815 | Msa0648430:CDS | 35.0% |
| ! | TCCTTTTGCAAAAGGTTTGA+TGG | - | chr4_3:54895804-54895823 | Msa0648430:CDS | 35.0% |
| ! | CCTTTTGCAAAAGGTTTGAT+GGG | - | chr4_3:54895805-54895824 | Msa0648430:CDS | 35.0% |
| GACCATACAAAAACAATGGT+GGG | + | chr4_3:54895847-54895866 | None:intergenic | 35.0% | |
| !!! | CACCATTGTTTTTGTATGGT+CGG | - | chr4_3:54895846-54895865 | Msa0648430:CDS | 35.0% |
| !!! | ACCATTGTTTTTGTATGGTC+GGG | - | chr4_3:54895847-54895866 | Msa0648430:CDS | 35.0% |
| AATCATCATATCACTCCTCT+GGG | - | chr4_3:54895879-54895898 | Msa0648430:CDS | 35.0% | |
| GTTAAGTATAAAAGGACCGT+TGG | + | chr4_3:54894392-54894411 | None:intergenic | 35.0% | |
| CAGTCGAGGTTAAGTATAAA+AGG | + | chr4_3:54894400-54894419 | None:intergenic | 35.0% | |
| ATATATAGTGATCACAGTCG+AGG | + | chr4_3:54894414-54894433 | None:intergenic | 35.0% | |
| GTGATTAGCATATCTATCAG+AGG | + | chr4_3:54894539-54894558 | None:intergenic | 35.0% | |
| ! | TCTTTCTGTAGTTGTTGCTT+TGG | - | chr4_3:54894694-54894713 | Msa0648430:CDS | 35.0% |
| !! | CTTTCTGTAGTTGTTGCTTT+GGG | - | chr4_3:54894695-54894714 | Msa0648430:CDS | 35.0% |
| TGTGATTTCATGTTGGTATG+AGG | - | chr4_3:54894981-54895000 | Msa0648430:CDS | 35.0% | |
| GGTTATAGGATGCATAATAG+AGG | - | chr4_3:54895076-54895095 | Msa0648430:CDS | 35.0% | |
| ATAGGATGCATAATAGAGGA+TGG | - | chr4_3:54895080-54895099 | Msa0648430:CDS | 35.0% | |
| AAGAAATTTCATTCTTCGGG+TGG | + | chr4_3:54895245-54895264 | None:intergenic | 35.0% | |
| AGGATAGCATACCTTAATGT+TGG | - | chr4_3:54895268-54895287 | Msa0648430:intron | 35.0% | |
| AAAAAGTGACATCGAGAGTT+TGG | + | chr4_3:54895375-54895394 | None:intergenic | 35.0% | |
| !!! | AACTCTCGATGTCACTTTTT+TGG | - | chr4_3:54895375-54895394 | Msa0648430:CDS | 35.0% |
| TTGCTGTGCTTGAAATTAAG+TGG | - | chr4_3:54895434-54895453 | Msa0648430:CDS | 35.0% | |
| !!! | AATGAGCAGTTTTGGTTCAT+TGG | - | chr4_3:54895487-54895506 | Msa0648430:CDS | 35.0% |
| TTTGAGTAAACCTTGAAGCA+CGG | + | chr4_3:54895536-54895555 | None:intergenic | 35.0% | |
| TTCACCTTGACTTCAAAATC+TGG | - | chr4_3:54895580-54895599 | Msa0648430:CDS | 35.0% | |
| ACCACCAATTGTAATCATGA+TGG | - | chr4_3:54895666-54895685 | Msa0648430:CDS | 35.0% | |
| ACCATCATGATTACAATTGG+TGG | + | chr4_3:54895670-54895689 | None:intergenic | 35.0% | |
| ! | AGGTGTTTTCTTCAGTTTCT+GGG | - | chr4_3:54895765-54895784 | Msa0648430:CDS | 35.0% |
| ! | CATCTCTATCCTTTTGCAAA+AGG | - | chr4_3:54895796-54895815 | Msa0648430:CDS | 35.0% |
| ! | TCCTTTTGCAAAAGGTTTGA+TGG | - | chr4_3:54895804-54895823 | Msa0648430:CDS | 35.0% |
| ! | CCTTTTGCAAAAGGTTTGAT+GGG | - | chr4_3:54895805-54895824 | Msa0648430:CDS | 35.0% |
| GACCATACAAAAACAATGGT+GGG | + | chr4_3:54895847-54895866 | None:intergenic | 35.0% | |
| !!! | CACCATTGTTTTTGTATGGT+CGG | - | chr4_3:54895846-54895865 | Msa0648430:CDS | 35.0% |
| !!! | ACCATTGTTTTTGTATGGTC+GGG | - | chr4_3:54895847-54895866 | Msa0648430:CDS | 35.0% |
| AATCATCATATCACTCCTCT+GGG | - | chr4_3:54895879-54895898 | Msa0648430:CDS | 35.0% | |
| ! | GGAAGGTATGTGCTTTATGA+TGG | - | chr4_3:54894453-54894472 | Msa0648430:CDS | 40.0% |
| !! | ATGTGCTTTATGATGGATCG+TGG | - | chr4_3:54894460-54894479 | Msa0648430:CDS | 40.0% |
| CAATTCCCTCAAAGGTTTGA+GGG | - | chr4_3:54894505-54894524 | Msa0648430:CDS | 40.0% | |
| CAATACCCTCAAACCTTTGA+GGG | + | chr4_3:54894513-54894532 | None:intergenic | 40.0% | |
| TCAATACCCTCAAACCTTTG+AGG | + | chr4_3:54894514-54894533 | None:intergenic | 40.0% | |
| AAACCTTCTAAACAGACAGC+CGG | + | chr4_3:54894629-54894648 | None:intergenic | 40.0% | |
| AACAACTACAGAAAGATGCG+CGG | + | chr4_3:54894690-54894709 | None:intergenic | 40.0% | |
| CAACACCTTAGAAGAGAACA+GGG | - | chr4_3:54894738-54894757 | Msa0648430:CDS | 40.0% | |
| CCACTGGAATTGAGTCAATA+AGG | + | chr4_3:54894843-54894862 | None:intergenic | 40.0% | |
| !! | CCTTATTGACTCAATTCCAG+TGG | - | chr4_3:54894840-54894859 | Msa0648430:CDS | 40.0% |
| GATCATCCTGCTGTGAAAAA+TGG | - | chr4_3:54894889-54894908 | Msa0648430:CDS | 40.0% | |
| CCAACATGAAATCACACTGA+TGG | + | chr4_3:54894977-54894996 | None:intergenic | 40.0% | |
| CCATCAGTGTGATTTCATGT+TGG | - | chr4_3:54894974-54894993 | Msa0648430:CDS | 40.0% | |
| GATCAATGGATCAGTTACAG+AGG | - | chr4_3:54895042-54895061 | Msa0648430:CDS | 40.0% | |
| AACCTATCCGTGAGATTGAT+GGG | + | chr4_3:54895154-54895173 | None:intergenic | 40.0% | |
| GTTGCATCAGGTTCTTAGAT+GGG | - | chr4_3:54895171-54895190 | Msa0648430:CDS | 40.0% | |
| AATGAACTGTCCAGAGAAGA+GGG | + | chr4_3:54895350-54895369 | None:intergenic | 40.0% | |
| !!! | CACTTTTTTGGCTTACCTCT+TGG | - | chr4_3:54895387-54895406 | Msa0648430:CDS | 40.0% |
| GTGCTTGAAATTAAGTGGCT+AGG | - | chr4_3:54895439-54895458 | Msa0648430:CDS | 40.0% | |
| TAGGAATTGAGCTGGAAGAA+TGG | - | chr4_3:54895458-54895477 | Msa0648430:CDS | 40.0% | |
| !!! | AGCAGTTTTGGTTCATTGGA+GGG | - | chr4_3:54895491-54895510 | Msa0648430:CDS | 40.0% |
| ACCTTGACTTCAAAATCTGG+CGG | - | chr4_3:54895583-54895602 | Msa0648430:CDS | 40.0% | |
| TATACAGTACCATACCACAG+TGG | - | chr4_3:54895728-54895747 | Msa0648430:CDS | 40.0% | |
| AGAAAACACCTCCTAGTAAC+CGG | + | chr4_3:54895756-54895775 | None:intergenic | 40.0% | |
| !! | GAGGTGTTTTCTTCAGTTTC+TGG | - | chr4_3:54895764-54895783 | Msa0648430:CDS | 40.0% |
| ! | TTTCTTCAGTTTCTGGGTCT+TGG | - | chr4_3:54895771-54895790 | Msa0648430:CDS | 40.0% |
| ! | CCCATCAAACCTTTTGCAAA+AGG | + | chr4_3:54895808-54895827 | None:intergenic | 40.0% |
| AAAGGTTTGATGGGAAGAAG+AGG | - | chr4_3:54895814-54895833 | Msa0648430:CDS | 40.0% | |
| AAGGTTTGATGGGAAGAAGA+GGG | - | chr4_3:54895815-54895834 | Msa0648430:CDS | 40.0% | |
| !!! | CACCCACCATTGTTTTTGTA+TGG | - | chr4_3:54895842-54895861 | Msa0648430:CDS | 40.0% |
| CGACCATACAAAAACAATGG+TGG | + | chr4_3:54895848-54895867 | None:intergenic | 40.0% | |
| ACCCGACCATACAAAAACAA+TGG | + | chr4_3:54895851-54895870 | None:intergenic | 40.0% | |
| CAATCATCATATCACTCCTC+TGG | - | chr4_3:54895878-54895897 | Msa0648430:CDS | 40.0% | |
| ! | GGAAGGTATGTGCTTTATGA+TGG | - | chr4_3:54894453-54894472 | Msa0648430:CDS | 40.0% |
| !! | ATGTGCTTTATGATGGATCG+TGG | - | chr4_3:54894460-54894479 | Msa0648430:CDS | 40.0% |
| CAATTCCCTCAAAGGTTTGA+GGG | - | chr4_3:54894505-54894524 | Msa0648430:CDS | 40.0% | |
| CAATACCCTCAAACCTTTGA+GGG | + | chr4_3:54894513-54894532 | None:intergenic | 40.0% | |
| TCAATACCCTCAAACCTTTG+AGG | + | chr4_3:54894514-54894533 | None:intergenic | 40.0% | |
| AAACCTTCTAAACAGACAGC+CGG | + | chr4_3:54894629-54894648 | None:intergenic | 40.0% | |
| AACAACTACAGAAAGATGCG+CGG | + | chr4_3:54894690-54894709 | None:intergenic | 40.0% | |
| CAACACCTTAGAAGAGAACA+GGG | - | chr4_3:54894738-54894757 | Msa0648430:CDS | 40.0% | |
| CCACTGGAATTGAGTCAATA+AGG | + | chr4_3:54894843-54894862 | None:intergenic | 40.0% | |
| !! | CCTTATTGACTCAATTCCAG+TGG | - | chr4_3:54894840-54894859 | Msa0648430:CDS | 40.0% |
| GATCATCCTGCTGTGAAAAA+TGG | - | chr4_3:54894889-54894908 | Msa0648430:CDS | 40.0% | |
| CCAACATGAAATCACACTGA+TGG | + | chr4_3:54894977-54894996 | None:intergenic | 40.0% | |
| CCATCAGTGTGATTTCATGT+TGG | - | chr4_3:54894974-54894993 | Msa0648430:CDS | 40.0% | |
| GATCAATGGATCAGTTACAG+AGG | - | chr4_3:54895042-54895061 | Msa0648430:CDS | 40.0% | |
| AACCTATCCGTGAGATTGAT+GGG | + | chr4_3:54895154-54895173 | None:intergenic | 40.0% | |
| GTTGCATCAGGTTCTTAGAT+GGG | - | chr4_3:54895171-54895190 | Msa0648430:CDS | 40.0% | |
| AATGAACTGTCCAGAGAAGA+GGG | + | chr4_3:54895350-54895369 | None:intergenic | 40.0% | |
| !!! | CACTTTTTTGGCTTACCTCT+TGG | - | chr4_3:54895387-54895406 | Msa0648430:CDS | 40.0% |
| GTGCTTGAAATTAAGTGGCT+AGG | - | chr4_3:54895439-54895458 | Msa0648430:CDS | 40.0% | |
| TAGGAATTGAGCTGGAAGAA+TGG | - | chr4_3:54895458-54895477 | Msa0648430:CDS | 40.0% | |
| !!! | AGCAGTTTTGGTTCATTGGA+GGG | - | chr4_3:54895491-54895510 | Msa0648430:CDS | 40.0% |
| ACCTTGACTTCAAAATCTGG+CGG | - | chr4_3:54895583-54895602 | Msa0648430:CDS | 40.0% | |
| TATACAGTACCATACCACAG+TGG | - | chr4_3:54895728-54895747 | Msa0648430:CDS | 40.0% | |
| AGAAAACACCTCCTAGTAAC+CGG | + | chr4_3:54895756-54895775 | None:intergenic | 40.0% | |
| !! | GAGGTGTTTTCTTCAGTTTC+TGG | - | chr4_3:54895764-54895783 | Msa0648430:CDS | 40.0% |
| ! | TTTCTTCAGTTTCTGGGTCT+TGG | - | chr4_3:54895771-54895790 | Msa0648430:CDS | 40.0% |
| ! | CCCATCAAACCTTTTGCAAA+AGG | + | chr4_3:54895808-54895827 | None:intergenic | 40.0% |
| AAAGGTTTGATGGGAAGAAG+AGG | - | chr4_3:54895814-54895833 | Msa0648430:CDS | 40.0% | |
| AAGGTTTGATGGGAAGAAGA+GGG | - | chr4_3:54895815-54895834 | Msa0648430:CDS | 40.0% | |
| !!! | CACCCACCATTGTTTTTGTA+TGG | - | chr4_3:54895842-54895861 | Msa0648430:CDS | 40.0% |
| CGACCATACAAAAACAATGG+TGG | + | chr4_3:54895848-54895867 | None:intergenic | 40.0% | |
| ACCCGACCATACAAAAACAA+TGG | + | chr4_3:54895851-54895870 | None:intergenic | 40.0% | |
| CAATCATCATATCACTCCTC+TGG | - | chr4_3:54895878-54895897 | Msa0648430:CDS | 40.0% | |
| !! | GAATGCATTGGTTAGAGCCT+CGG | - | chr4_3:54894357-54894376 | Msa0648430:CDS | 45.0% |
| AACTCCAAAGCAATGAGGGA+AGG | - | chr4_3:54894436-54894455 | Msa0648430:CDS | 45.0% | |
| CATACCTTCCCTCATTGCTT+TGG | + | chr4_3:54894443-54894462 | None:intergenic | 45.0% | |
| !! | TGCTTTATGATGGATCGTGG+TGG | - | chr4_3:54894463-54894482 | Msa0648430:CDS | 45.0% |
| GCTATGTCCAATTCCCTCAA+AGG | - | chr4_3:54894497-54894516 | Msa0648430:CDS | 45.0% | |
| ! | CCTCAAACCTTTGAGGGAAT+TGG | + | chr4_3:54894507-54894526 | None:intergenic | 45.0% |
| CCAATTCCCTCAAAGGTTTG+AGG | - | chr4_3:54894504-54894523 | Msa0648430:CDS | 45.0% | |
| GTTAACATGAGAGCCCTTGA+TGG | - | chr4_3:54894577-54894596 | Msa0648430:CDS | 45.0% | |
| !! | CCTGTTCTCTTCTAAGGTGT+TGG | + | chr4_3:54894740-54894759 | None:intergenic | 45.0% |
| CCAACACCTTAGAAGAGAAC+AGG | - | chr4_3:54894737-54894756 | Msa0648430:CDS | 45.0% | |
| TAGTGCCCTGTTCTCTTCTA+AGG | + | chr4_3:54894746-54894765 | None:intergenic | 45.0% | |
| ! | TAGAAGAGAACAGGGCACTA+AGG | - | chr4_3:54894746-54894765 | Msa0648430:CDS | 45.0% |
| GTATGAGGACAAGACTGAGT+GGG | - | chr4_3:54894996-54895015 | Msa0648430:CDS | 45.0% | |
| TATGAGGACAAGACTGAGTG+GGG | - | chr4_3:54894997-54895016 | Msa0648430:CDS | 45.0% | |
| TGGATCAGTTACAGAGGATG+TGG | - | chr4_3:54895048-54895067 | Msa0648430:CDS | 45.0% | |
| ! | AGGATGTGGTCACTGGTTAT+AGG | - | chr4_3:54895062-54895081 | Msa0648430:CDS | 45.0% |
| AACTGCTCCCATCAATCTCA+CGG | - | chr4_3:54895144-54895163 | Msa0648430:CDS | 45.0% | |
| CAACCTATCCGTGAGATTGA+TGG | + | chr4_3:54895155-54895174 | None:intergenic | 45.0% | |
| GGTTGCATCAGGTTCTTAGA+TGG | - | chr4_3:54895170-54895189 | Msa0648430:CDS | 45.0% | |
| CAATGAACTGTCCAGAGAAG+AGG | + | chr4_3:54895351-54895370 | None:intergenic | 45.0% | |
| GTGTCACAGTAATAGCCAAG+AGG | + | chr4_3:54895405-54895424 | None:intergenic | 45.0% | |
| TAAGTGGCTAGGAATTGAGC+TGG | - | chr4_3:54895450-54895469 | Msa0648430:CDS | 45.0% | |
| GAATTGAGCTGGAAGAATGG+TGG | - | chr4_3:54895461-54895480 | Msa0648430:CDS | 45.0% | |
| ! | GGTGGAGAAATGAGCAGTTT+TGG | - | chr4_3:54895479-54895498 | Msa0648430:CDS | 45.0% |
| !!! | GAGCAGTTTTGGTTCATTGG+AGG | - | chr4_3:54895490-54895509 | Msa0648430:CDS | 45.0% |
| GGTTTACTCAAAGTCGTTGC+AGG | - | chr4_3:54895544-54895563 | Msa0648430:CDS | 45.0% | |
| !!! | ACCGCCAGATTTTGAAGTCA+AGG | + | chr4_3:54895587-54895606 | None:intergenic | 45.0% |
| !! | GAATGCATTGGTTAGAGCCT+CGG | - | chr4_3:54894357-54894376 | Msa0648430:CDS | 45.0% |
| AACTCCAAAGCAATGAGGGA+AGG | - | chr4_3:54894436-54894455 | Msa0648430:CDS | 45.0% | |
| CATACCTTCCCTCATTGCTT+TGG | + | chr4_3:54894443-54894462 | None:intergenic | 45.0% | |
| !! | TGCTTTATGATGGATCGTGG+TGG | - | chr4_3:54894463-54894482 | Msa0648430:CDS | 45.0% |
| GCTATGTCCAATTCCCTCAA+AGG | - | chr4_3:54894497-54894516 | Msa0648430:CDS | 45.0% | |
| ! | CCTCAAACCTTTGAGGGAAT+TGG | + | chr4_3:54894507-54894526 | None:intergenic | 45.0% |
| CCAATTCCCTCAAAGGTTTG+AGG | - | chr4_3:54894504-54894523 | Msa0648430:CDS | 45.0% | |
| GTTAACATGAGAGCCCTTGA+TGG | - | chr4_3:54894577-54894596 | Msa0648430:CDS | 45.0% | |
| !! | CCTGTTCTCTTCTAAGGTGT+TGG | + | chr4_3:54894740-54894759 | None:intergenic | 45.0% |
| CCAACACCTTAGAAGAGAAC+AGG | - | chr4_3:54894737-54894756 | Msa0648430:CDS | 45.0% | |
| TAGTGCCCTGTTCTCTTCTA+AGG | + | chr4_3:54894746-54894765 | None:intergenic | 45.0% | |
| ! | TAGAAGAGAACAGGGCACTA+AGG | - | chr4_3:54894746-54894765 | Msa0648430:CDS | 45.0% |
| GTATGAGGACAAGACTGAGT+GGG | - | chr4_3:54894996-54895015 | Msa0648430:CDS | 45.0% | |
| TATGAGGACAAGACTGAGTG+GGG | - | chr4_3:54894997-54895016 | Msa0648430:CDS | 45.0% | |
| TGGATCAGTTACAGAGGATG+TGG | - | chr4_3:54895048-54895067 | Msa0648430:CDS | 45.0% | |
| ! | AGGATGTGGTCACTGGTTAT+AGG | - | chr4_3:54895062-54895081 | Msa0648430:CDS | 45.0% |
| AACTGCTCCCATCAATCTCA+CGG | - | chr4_3:54895144-54895163 | Msa0648430:CDS | 45.0% | |
| CAACCTATCCGTGAGATTGA+TGG | + | chr4_3:54895155-54895174 | None:intergenic | 45.0% | |
| GGTTGCATCAGGTTCTTAGA+TGG | - | chr4_3:54895170-54895189 | Msa0648430:CDS | 45.0% | |
| CAATGAACTGTCCAGAGAAG+AGG | + | chr4_3:54895351-54895370 | None:intergenic | 45.0% | |
| GTGTCACAGTAATAGCCAAG+AGG | + | chr4_3:54895405-54895424 | None:intergenic | 45.0% | |
| TAAGTGGCTAGGAATTGAGC+TGG | - | chr4_3:54895450-54895469 | Msa0648430:CDS | 45.0% | |
| GAATTGAGCTGGAAGAATGG+TGG | - | chr4_3:54895461-54895480 | Msa0648430:CDS | 45.0% | |
| ! | GGTGGAGAAATGAGCAGTTT+TGG | - | chr4_3:54895479-54895498 | Msa0648430:CDS | 45.0% |
| !!! | GAGCAGTTTTGGTTCATTGG+AGG | - | chr4_3:54895490-54895509 | Msa0648430:CDS | 45.0% |
| GGTTTACTCAAAGTCGTTGC+AGG | - | chr4_3:54895544-54895563 | Msa0648430:CDS | 45.0% | |
| !!! | ACCGCCAGATTTTGAAGTCA+AGG | + | chr4_3:54895587-54895606 | None:intergenic | 45.0% |
| GAGGGAATTGGACATAGCAG+AGG | + | chr4_3:54894495-54894514 | None:intergenic | 50.0% | |
| !! | AGAGCCCTTGATGGACTTCA+AGG | - | chr4_3:54894586-54894605 | Msa0648430:CDS | 50.0% |
| TGGGCCTTGAAGTCCATCAA+GGG | + | chr4_3:54894593-54894612 | None:intergenic | 50.0% | |
| CTTCAAGGCCCAGTCTATGT+AGG | - | chr4_3:54894601-54894620 | Msa0648430:CDS | 50.0% | |
| ! | AGCCGGTTCCTACATAGACT+GGG | + | chr4_3:54894612-54894631 | None:intergenic | 50.0% |
| GAACCGGCTGTCTGTTTAGA+AGG | - | chr4_3:54894623-54894642 | Msa0648430:CDS | 50.0% | |
| GAAAGATGCGCGGTCTTCTT+TGG | + | chr4_3:54894680-54894699 | None:intergenic | 50.0% | |
| ! | AGAGAACAGGGCACTAAGGA+TGG | - | chr4_3:54894750-54894769 | Msa0648430:CDS | 50.0% |
| ! | GAGAACAGGGCACTAAGGAT+GGG | - | chr4_3:54894751-54894770 | Msa0648430:CDS | 50.0% |
| ATTCCAGTGGCACAGTTCCA+AGG | - | chr4_3:54894853-54894872 | Msa0648430:CDS | 50.0% | |
| ACAGCAGGATGATCAGCAAG+TGG | + | chr4_3:54894883-54894902 | None:intergenic | 50.0% | |
| !! | GGTCGTCCATTTTTCACAGC+AGG | + | chr4_3:54894898-54894917 | None:intergenic | 50.0% |
| GTGAAAAATGGACGACCTCC+TGG | - | chr4_3:54894901-54894920 | Msa0648430:CDS | 50.0% | |
| GCTGCTTGATGCATCAACTG+TGG | - | chr4_3:54894945-54894964 | Msa0648430:CDS | 50.0% | |
| GGTATGAGGACAAGACTGAG+TGG | - | chr4_3:54894995-54895014 | Msa0648430:CDS | 50.0% | |
| CAGCGTGTTGGATGGATCAA+TGG | - | chr4_3:54895028-54895047 | Msa0648430:CDS | 50.0% | |
| GTTACAGAGGATGTGGTCAC+TGG | - | chr4_3:54895055-54895074 | Msa0648430:CDS | 50.0% | |
| ACTAAATGTGACGCCTTCCG+CGG | - | chr4_3:54895121-54895140 | Msa0648430:CDS | 50.0% | |
| CTCCCATCAATCTCACGGAT+AGG | - | chr4_3:54895149-54895168 | Msa0648430:CDS | 50.0% | |
| TCTCACGGATAGGTTGCATC+AGG | - | chr4_3:54895159-54895178 | Msa0648430:CDS | 50.0% | |
| !! | CAGGTTCTTAGATGGGCTAC+TGG | - | chr4_3:54895178-54895197 | Msa0648430:CDS | 50.0% |
| GTTTGATGGGAAGAAGAGGG+AGG | - | chr4_3:54895818-54895837 | Msa0648430:CDS | 50.0% | |
| CATCATATCACTCCTCTGGG+TGG | - | chr4_3:54895882-54895901 | Msa0648430:CDS | 50.0% | |
| ACTGGAATGAACCGCCTATC+TGG | + | chr4_3:54895933-54895952 | None:intergenic | 50.0% | |
| GAGGGAATTGGACATAGCAG+AGG | + | chr4_3:54894495-54894514 | None:intergenic | 50.0% | |
| !! | AGAGCCCTTGATGGACTTCA+AGG | - | chr4_3:54894586-54894605 | Msa0648430:CDS | 50.0% |
| TGGGCCTTGAAGTCCATCAA+GGG | + | chr4_3:54894593-54894612 | None:intergenic | 50.0% | |
| CTTCAAGGCCCAGTCTATGT+AGG | - | chr4_3:54894601-54894620 | Msa0648430:CDS | 50.0% | |
| ! | AGCCGGTTCCTACATAGACT+GGG | + | chr4_3:54894612-54894631 | None:intergenic | 50.0% |
| GAACCGGCTGTCTGTTTAGA+AGG | - | chr4_3:54894623-54894642 | Msa0648430:CDS | 50.0% | |
| GAAAGATGCGCGGTCTTCTT+TGG | + | chr4_3:54894680-54894699 | None:intergenic | 50.0% | |
| ! | AGAGAACAGGGCACTAAGGA+TGG | - | chr4_3:54894750-54894769 | Msa0648430:CDS | 50.0% |
| ! | GAGAACAGGGCACTAAGGAT+GGG | - | chr4_3:54894751-54894770 | Msa0648430:CDS | 50.0% |
| ATTCCAGTGGCACAGTTCCA+AGG | - | chr4_3:54894853-54894872 | Msa0648430:CDS | 50.0% | |
| ACAGCAGGATGATCAGCAAG+TGG | + | chr4_3:54894883-54894902 | None:intergenic | 50.0% | |
| !! | GGTCGTCCATTTTTCACAGC+AGG | + | chr4_3:54894898-54894917 | None:intergenic | 50.0% |
| GTGAAAAATGGACGACCTCC+TGG | - | chr4_3:54894901-54894920 | Msa0648430:CDS | 50.0% | |
| GCTGCTTGATGCATCAACTG+TGG | - | chr4_3:54894945-54894964 | Msa0648430:CDS | 50.0% | |
| GGTATGAGGACAAGACTGAG+TGG | - | chr4_3:54894995-54895014 | Msa0648430:CDS | 50.0% | |
| CAGCGTGTTGGATGGATCAA+TGG | - | chr4_3:54895028-54895047 | Msa0648430:CDS | 50.0% | |
| GTTACAGAGGATGTGGTCAC+TGG | - | chr4_3:54895055-54895074 | Msa0648430:CDS | 50.0% | |
| ACTAAATGTGACGCCTTCCG+CGG | - | chr4_3:54895121-54895140 | Msa0648430:CDS | 50.0% | |
| CTCCCATCAATCTCACGGAT+AGG | - | chr4_3:54895149-54895168 | Msa0648430:CDS | 50.0% | |
| TCTCACGGATAGGTTGCATC+AGG | - | chr4_3:54895159-54895178 | Msa0648430:CDS | 50.0% | |
| !! | CAGGTTCTTAGATGGGCTAC+TGG | - | chr4_3:54895178-54895197 | Msa0648430:CDS | 50.0% |
| GTTTGATGGGAAGAAGAGGG+AGG | - | chr4_3:54895818-54895837 | Msa0648430:CDS | 50.0% | |
| CATCATATCACTCCTCTGGG+TGG | - | chr4_3:54895882-54895901 | Msa0648430:CDS | 50.0% | |
| ACTGGAATGAACCGCCTATC+TGG | + | chr4_3:54895933-54895952 | None:intergenic | 50.0% | |
| CTGGGCCTTGAAGTCCATCA+AGG | + | chr4_3:54894594-54894613 | None:intergenic | 55.0% | |
| GGCCCAGTCTATGTAGGAAC+CGG | - | chr4_3:54894607-54894626 | Msa0648430:CDS | 55.0% | |
| ! | CAGCCGGTTCCTACATAGAC+TGG | + | chr4_3:54894613-54894632 | None:intergenic | 55.0% |
| CTACCTTGGAACTGTGCCAC+TGG | + | chr4_3:54894859-54894878 | None:intergenic | 55.0% | |
| CAGTGGCACAGTTCCAAGGT+AGG | - | chr4_3:54894857-54894876 | Msa0648430:CDS | 55.0% | |
| GATCAGCAAGTGGCCTACCT+TGG | + | chr4_3:54894873-54894892 | None:intergenic | 55.0% | |
| !! | GGTATAGTGAGAGCACCAGG+AGG | + | chr4_3:54894919-54894938 | None:intergenic | 55.0% |
| !! | CGAGGTATAGTGAGAGCACC+AGG | + | chr4_3:54894922-54894941 | None:intergenic | 55.0% |
| GATGCATCAAGCAGCTCACG+AGG | + | chr4_3:54894940-54894959 | None:intergenic | 55.0% | |
| GACAAGACTGAGTGGGGAGT+GGG | - | chr4_3:54895003-54895022 | Msa0648430:CDS | 55.0% | |
| ACAAGACTGAGTGGGGAGTG+GGG | - | chr4_3:54895004-54895023 | Msa0648430:CDS | 55.0% | |
| GATTGATGGGAGCAGTTCCG+CGG | + | chr4_3:54895141-54895160 | None:intergenic | 55.0% | |
| CATCTAGCTGCCGTGCTTCA+AGG | - | chr4_3:54895523-54895542 | Msa0648430:CDS | 55.0% | |
| GTACCATACCACAGTGGAGC+CGG | - | chr4_3:54895734-54895753 | Msa0648430:CDS | 55.0% | |
| ! | TAACCGGCTCCACTGTGGTA+TGG | + | chr4_3:54895740-54895759 | None:intergenic | 55.0% |
| ! | GTGGATTGATAGCCACCCAG+AGG | + | chr4_3:54895897-54895916 | None:intergenic | 55.0% |
| GTGGCTATCAATCCACCAGC+CGG | - | chr4_3:54895901-54895920 | Msa0648430:CDS | 55.0% | |
| ACCGCCTATCTGGTCTGTAC+CGG | + | chr4_3:54895923-54895942 | None:intergenic | 55.0% | |
| CTGGGCCTTGAAGTCCATCA+AGG | + | chr4_3:54894594-54894613 | None:intergenic | 55.0% | |
| GGCCCAGTCTATGTAGGAAC+CGG | - | chr4_3:54894607-54894626 | Msa0648430:CDS | 55.0% | |
| ! | CAGCCGGTTCCTACATAGAC+TGG | + | chr4_3:54894613-54894632 | None:intergenic | 55.0% |
| CTACCTTGGAACTGTGCCAC+TGG | + | chr4_3:54894859-54894878 | None:intergenic | 55.0% | |
| CAGTGGCACAGTTCCAAGGT+AGG | - | chr4_3:54894857-54894876 | Msa0648430:CDS | 55.0% | |
| GATCAGCAAGTGGCCTACCT+TGG | + | chr4_3:54894873-54894892 | None:intergenic | 55.0% | |
| !! | GGTATAGTGAGAGCACCAGG+AGG | + | chr4_3:54894919-54894938 | None:intergenic | 55.0% |
| !! | CGAGGTATAGTGAGAGCACC+AGG | + | chr4_3:54894922-54894941 | None:intergenic | 55.0% |
| GATGCATCAAGCAGCTCACG+AGG | + | chr4_3:54894940-54894959 | None:intergenic | 55.0% | |
| GACAAGACTGAGTGGGGAGT+GGG | - | chr4_3:54895003-54895022 | Msa0648430:CDS | 55.0% | |
| ACAAGACTGAGTGGGGAGTG+GGG | - | chr4_3:54895004-54895023 | Msa0648430:CDS | 55.0% | |
| GATTGATGGGAGCAGTTCCG+CGG | + | chr4_3:54895141-54895160 | None:intergenic | 55.0% | |
| CATCTAGCTGCCGTGCTTCA+AGG | - | chr4_3:54895523-54895542 | Msa0648430:CDS | 55.0% | |
| GTACCATACCACAGTGGAGC+CGG | - | chr4_3:54895734-54895753 | Msa0648430:CDS | 55.0% | |
| ! | TAACCGGCTCCACTGTGGTA+TGG | + | chr4_3:54895740-54895759 | None:intergenic | 55.0% |
| ! | GTGGATTGATAGCCACCCAG+AGG | + | chr4_3:54895897-54895916 | None:intergenic | 55.0% |
| GTGGCTATCAATCCACCAGC+CGG | - | chr4_3:54895901-54895920 | Msa0648430:CDS | 55.0% | |
| ACCGCCTATCTGGTCTGTAC+CGG | + | chr4_3:54895923-54895942 | None:intergenic | 55.0% | |
| GCCTCGGCTGTCATGTCCAA+CGG | - | chr4_3:54894373-54894392 | Msa0648430:CDS | 60.0% | |
| ACCGTTGGACATGACAGCCG+AGG | + | chr4_3:54894377-54894396 | None:intergenic | 60.0% | |
| GGACAAGACTGAGTGGGGAG+TGG | - | chr4_3:54895002-54895021 | Msa0648430:CDS | 60.0% | |
| AGTGGGGACAGCGTGTTGGA+TGG | - | chr4_3:54895020-54895039 | Msa0648430:CDS | 60.0% | |
| AGAAGAGGGACAGTGCAGGC+AGG | + | chr4_3:54895336-54895355 | None:intergenic | 60.0% | |
| CCAGAGAAGAGGGACAGTGC+AGG | + | chr4_3:54895340-54895359 | None:intergenic | 60.0% | |
| CCTGCACTGTCCCTCTTCTC+TGG | - | chr4_3:54895337-54895356 | Msa0648430:CDS | 60.0% | |
| ! | CCTAGTAACCGGCTCCACTG+TGG | + | chr4_3:54895745-54895764 | None:intergenic | 60.0% |
| CCACAGTGGAGCCGGTTACT+AGG | - | chr4_3:54895742-54895761 | Msa0648430:CDS | 60.0% | |
| CAGTGGAGCCGGTTACTAGG+AGG | - | chr4_3:54895745-54895764 | Msa0648430:CDS | 60.0% | |
| !! | ATCTGGTCTGTACCGGCTGG+TGG | + | chr4_3:54895916-54895935 | None:intergenic | 60.0% |
| ! | CCTATCTGGTCTGTACCGGC+TGG | + | chr4_3:54895919-54895938 | None:intergenic | 60.0% |
| CCAGCCGGTACAGACCAGAT+AGG | - | chr4_3:54895916-54895935 | Msa0648430:CDS | 60.0% | |
| GCCGGTACAGACCAGATAGG+CGG | - | chr4_3:54895919-54895938 | Msa0648430:CDS | 60.0% | |
| GCCTCGGCTGTCATGTCCAA+CGG | - | chr4_3:54894373-54894392 | Msa0648430:CDS | 60.0% | |
| ACCGTTGGACATGACAGCCG+AGG | + | chr4_3:54894377-54894396 | None:intergenic | 60.0% | |
| GGACAAGACTGAGTGGGGAG+TGG | - | chr4_3:54895002-54895021 | Msa0648430:CDS | 60.0% | |
| AGTGGGGACAGCGTGTTGGA+TGG | - | chr4_3:54895020-54895039 | Msa0648430:CDS | 60.0% | |
| AGAAGAGGGACAGTGCAGGC+AGG | + | chr4_3:54895336-54895355 | None:intergenic | 60.0% | |
| CCAGAGAAGAGGGACAGTGC+AGG | + | chr4_3:54895340-54895359 | None:intergenic | 60.0% | |
| CCTGCACTGTCCCTCTTCTC+TGG | - | chr4_3:54895337-54895356 | Msa0648430:CDS | 60.0% | |
| ! | CCTAGTAACCGGCTCCACTG+TGG | + | chr4_3:54895745-54895764 | None:intergenic | 60.0% |
| CCACAGTGGAGCCGGTTACT+AGG | - | chr4_3:54895742-54895761 | Msa0648430:CDS | 60.0% | |
| CAGTGGAGCCGGTTACTAGG+AGG | - | chr4_3:54895745-54895764 | Msa0648430:CDS | 60.0% | |
| !! | ATCTGGTCTGTACCGGCTGG+TGG | + | chr4_3:54895916-54895935 | None:intergenic | 60.0% |
| ! | CCTATCTGGTCTGTACCGGC+TGG | + | chr4_3:54895919-54895938 | None:intergenic | 60.0% |
| CCAGCCGGTACAGACCAGAT+AGG | - | chr4_3:54895916-54895935 | Msa0648430:CDS | 60.0% | |
| GCCGGTACAGACCAGATAGG+CGG | - | chr4_3:54895919-54895938 | Msa0648430:CDS | 60.0% | |
| CGGTCTTCTTTGGCGCGTGG+AGG | + | chr4_3:54894670-54894689 | None:intergenic | 65.0% | |
| GATGGGAGCAGTTCCGCGGA+AGG | + | chr4_3:54895137-54895156 | None:intergenic | 65.0% | |
| CGGTCTTCTTTGGCGCGTGG+AGG | + | chr4_3:54894670-54894689 | None:intergenic | 65.0% | |
| GATGGGAGCAGTTCCGCGGA+AGG | + | chr4_3:54895137-54895156 | None:intergenic | 65.0% | |
| GCGCGGTCTTCTTTGGCGCG+TGG | + | chr4_3:54894673-54894692 | None:intergenic | 70.0% | |
| GGGGAGTGGGGACAGCGTGT+TGG | - | chr4_3:54895016-54895035 | Msa0648430:CDS | 70.0% | |
| GCGCGGTCTTCTTTGGCGCG+TGG | + | chr4_3:54894673-54894692 | None:intergenic | 70.0% | |
| GGGGAGTGGGGACAGCGTGT+TGG | - | chr4_3:54895016-54895035 | Msa0648430:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 54894355 | 54895960 | 54894355 | ID=Msa0648430;Name=Msa0648430 |
| chr4_3 | mRNA | 54894355 | 54895960 | 54894355 | ID=Msa0648430-mRNA-1;Parent=Msa0648430;Name=Msa0648430-mRNA-1;_AED=0.37;_eAED=0.38;_QI=0|0|0|1|1|1|2|0|505 |
| chr4_3 | exon | 54895320 | 54895960 | 54895320 | ID=Msa0648430-mRNA-1:exon:13969;Parent=Msa0648430-mRNA-1 |
| chr4_3 | exon | 54894355 | 54895231 | 54894355 | ID=Msa0648430-mRNA-1:exon:13968;Parent=Msa0648430-mRNA-1 |
| chr4_3 | CDS | 54895320 | 54895960 | 54895320 | ID=Msa0648430-mRNA-1:cds;Parent=Msa0648430-mRNA-1 |
| chr4_3 | CDS | 54894355 | 54895231 | 54894355 | ID=Msa0648430-mRNA-1:cds;Parent=Msa0648430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
