AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0608060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0608060 MtrunA17_Chr4g0039801 99.737 1142 3 0 1 1142 1 1142 0.0 2368
Msa0608060 MtrunA17_Chr5g0410641 75.358 1116 249 8 43 1142 16 1121 0.0 1747
Msa0608060 MtrunA17_Chr1g0165411 71.989 1121 272 13 29 1142 20 1105 0.0 1665
Msa0608060 MtrunA17_Chr1g0165421 70.018 1124 310 11 29 1142 27 1133 0.0 1631
Msa0608060 MtrunA17_Chr7g0269741 66.109 1136 332 17 35 1142 61 1171 0.0 1473
Msa0608060 MtrunA17_Chr2g0297351 69.726 948 265 9 202 1140 88 1022 0.0 1413
Msa0608060 MtrunA17_Chr7g0274751 75.161 934 76 12 206 1139 30 807 0.0 1362
Msa0608060 MtrunA17_Chr7g0274751 93.939 33 2 0 106 138 1 33 2.52e-11 68.2
Msa0608060 MtrunA17_Chr4g0073711 48.950 952 388 19 188 1128 157 1021 0.0 876
Msa0608060 MtrunA17_Chr8g0383701 47.739 951 362 19 237 1133 215 1084 0.0 853
Msa0608060 MtrunA17_Chr8g0379241 45.506 1057 444 25 119 1128 1 972 0.0 849
Msa0608060 MtrunA17_Chr2g0284211 44.656 1048 430 20 132 1128 12 960 0.0 849
Msa0608060 MtrunA17_Chr3g0088821 50.169 887 333 17 272 1128 254 1061 0.0 845
Msa0608060 MtrunA17_Chr2g0296991 42.740 1102 453 25 111 1128 20 1027 0.0 838
Msa0608060 MtrunA17_Chr8g0352231 48.950 905 353 14 254 1128 236 1061 0.0 836
Msa0608060 MtrunA17_Chr3g0137951 46.908 938 384 17 220 1128 217 1069 0.0 828
Msa0608060 MtrunA17_Chr1g0201731 47.385 937 383 17 237 1135 223 1087 0.0 816
Msa0608060 MtrunA17_Chr1g0183381 46.837 901 392 15 233 1127 67 886 0.0 814
Msa0608060 MtrunA17_Chr3g0078671 41.204 1080 477 20 124 1128 36 1032 0.0 795
Msa0608060 MtrunA17_Chr7g0267731 47.013 904 369 16 257 1128 144 969 0.0 792
Msa0608060 MtrunA17_Chr8g0364641 42.160 1065 485 30 90 1128 5 964 0.0 787
Msa0608060 MtrunA17_Chr2g0322371 29.060 819 429 18 318 1119 47 730 8.28e-104 344
Msa0608060 MtrunA17_Chr2g0322361 31.421 802 398 27 318 1100 52 720 2.15e-102 340
Msa0608060 MtrunA17_Chr4g0046401 29.621 844 444 18 289 1119 24 730 3.16e-100 334
Msa0608060 MtrunA17_Chr4g0025201 28.434 830 451 19 305 1121 37 736 4.33e-96 323
Msa0608060 MtrunA17_Chr2g0322351 30.025 806 414 20 318 1109 49 718 1.50e-95 321
Msa0608060 MtrunA17_Chr3g0126641 68.664 217 52 4 649 856 1 210 3.87e-95 301
Msa0608060 MtrunA17_Chr1g0186381 27.566 867 457 25 280 1120 9 730 7.96e-87 297
Msa0608060 MtrunA17_Chr3g0102541 27.850 851 466 21 288 1126 21 735 1.05e-80 280
Msa0608060 MtrunA17_Chr2g0307191 27.078 842 446 21 269 1104 12 691 3.50e-79 275
Msa0608060 MtrunA17_Chr3g0102531 35.198 429 207 11 288 712 21 382 3.12e-72 256
Msa0608060 MtrunA17_Chr3g0102531 26.496 351 243 7 784 1123 382 728 3.49e-25 112
Msa0608060 MtrunA17_Chr3g0102551 35.648 432 208 11 285 712 28 393 3.57e-71 253
Msa0608060 MtrunA17_Chr3g0102551 31.132 212 145 1 822 1032 428 639 1.04e-24 111
Msa0608060 MtrunA17_Chr2g0298581 25.000 824 457 19 289 1103 19 690 1.60e-66 238
Msa0608060 MtrunA17_Chr2g0322341 33.889 360 168 7 320 678 53 343 2.14e-59 208
Msa0608060 MtrunA17_Chr3g0095791 27.072 543 317 14 574 1104 215 690 2.65e-50 190
Msa0608060 MtrunA17_Chr3g0095791 34.101 217 123 6 285 497 15 215 5.41e-29 124
Msa0608060 MtrunA17_Chr3g0077511 26.186 527 310 10 591 1104 233 693 9.73e-49 186
Msa0608060 MtrunA17_Chr3g0077511 33.333 213 123 6 289 497 19 216 1.33e-28 123
Msa0608060 MtrunA17_Chr2g0322331 28.344 314 195 6 804 1100 51 351 3.41e-30 124
Msa0608060 MtrunA17_Chr2g0307241 40.000 185 84 6 269 453 12 169 3.57e-30 119
Msa0608060 MtrunA17_Chr0c03g0490021 44.355 124 67 1 973 1096 1 122 2.05e-29 114
Msa0608060 MtrunA17_Chr3g0126661 49.573 117 41 5 220 336 5 103 1.26e-23 100
Msa0608060 MtrunA17_Chr7g0227271 37.791 172 60 4 218 385 25 153 1.66e-23 98.2
Msa0608060 MtrunA17_Chr3g0126651 75.000 56 14 0 558 613 16 71 5.35e-22 90.9
Msa0608060 MtrunA17_Chr8g0355061 63.158 57 21 0 973 1029 1 57 2.10e-20 85.9
Msa0608060 MtrunA17_Chr7g0252781 60.377 53 21 0 1076 1128 19 71 8.08e-15 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0608060 AT3G03050.1 83.947 1140 173 7 9 1142 10 1145 0.0 2013
Msa0608060 AT5G16910.1 82.635 1146 187 5 4 1142 5 1145 0.0 1969
Msa0608060 AT4G38190.1 72.554 1104 266 12 30 1128 21 1092 0.0 1677
Msa0608060 AT1G02730.1 64.842 1169 352 16 10 1142 36 1181 0.0 1509
Msa0608060 AT2G33100.2 70.483 952 256 9 198 1137 95 1033 0.0 1431
Msa0608060 AT2G33100.1 70.483 952 256 9 198 1137 95 1033 0.0 1431
Msa0608060 AT1G32180.1 66.369 895 283 7 258 1141 91 978 0.0 1248
Msa0608060 AT1G32180.2 66.369 895 283 7 258 1141 91 978 0.0 1248
Msa0608060 AT5G09870.1 42.703 1110 438 24 124 1128 36 1052 0.0 862
Msa0608060 AT5G05170.1 50.847 885 329 16 272 1128 242 1048 0.0 861
Msa0608060 AT2G25540.1 44.152 1103 443 27 124 1135 30 1050 0.0 858
Msa0608060 AT5G17420.1 49.160 893 360 16 248 1128 199 1009 0.0 855
Msa0608060 AT5G64740.1 45.079 1016 412 20 167 1128 144 1067 0.0 851
Msa0608060 AT5G44030.1 43.550 1093 435 24 132 1128 26 1032 0.0 849
Msa0608060 AT4G18780.1 43.928 1054 435 22 132 1128 12 966 0.0 845
Msa0608060 AT4G32410.1 48.136 939 369 20 220 1128 213 1063 0.0 845
Msa0608060 AT2G21770.1 46.590 953 367 17 238 1133 208 1075 0.0 837
Msa0608060 AT5G44030.2 48.026 912 342 14 272 1128 227 1061 0.0 837
Msa0608060 AT4G39350.1 47.368 893 360 14 266 1128 254 1066 0.0 804
Msa0608060 AT5G44030.3 48.470 817 294 13 367 1128 9 753 0.0 755
Msa0608060 AT2G32530.1 30.498 823 406 24 273 1064 10 697 1.12e-100 336
Msa0608060 AT2G32620.1 30.130 843 424 28 306 1117 40 748 4.58e-99 332
Msa0608060 AT4G15320.5 29.371 858 447 24 273 1102 10 736 7.80e-96 323
Msa0608060 AT2G32610.1 30.057 875 431 32 293 1124 21 757 8.50e-96 323
Msa0608060 AT4G15320.3 29.487 858 446 24 273 1102 10 736 1.08e-95 322
Msa0608060 AT4G15320.4 29.466 862 456 25 273 1102 10 751 9.24e-95 320
Msa0608060 AT2G32540.1 29.020 765 402 17 313 1059 48 689 8.58e-94 317
Msa0608060 AT2G32620.3 31.647 692 326 23 306 983 40 598 3.73e-93 311
Msa0608060 AT2G32620.4 30.620 774 384 26 375 1117 1 652 7.79e-92 309
Msa0608060 AT4G15290.1 29.442 771 389 21 313 1059 48 687 2.47e-91 310
Msa0608060 AT2G32620.2 32.149 619 285 20 306 916 40 531 2.17e-85 288
Msa0608060 AT4G15320.2 28.055 802 383 22 273 1023 10 668 1.52e-80 281
Msa0608060 AT4G15320.1 27.683 820 406 23 273 1023 10 711 4.43e-79 278
Msa0608060 AT1G55850.1 36.160 401 177 9 317 712 65 391 1.78e-66 239
Msa0608060 AT1G55850.1 27.036 307 213 6 819 1117 417 720 2.35e-23 107
Msa0608060 AT4G24010.1 35.862 435 204 11 287 716 25 389 6.98e-66 238
Msa0608060 AT4G24010.1 30.403 273 179 5 805 1067 402 673 1.28e-29 127
Msa0608060 AT4G23990.1 38.551 345 157 6 369 712 116 406 2.03e-62 228
Msa0608060 AT4G23990.1 28.662 314 212 6 813 1119 434 742 1.54e-31 133
Msa0608060 AT4G24000.1 31.944 432 218 8 287 716 22 379 3.72e-59 218
Msa0608060 AT4G24000.1 26.582 316 216 8 814 1120 406 714 2.91e-28 122
Msa0608060 AT4G23990.2 28.662 314 212 6 813 1119 220 528 2.31e-31 130
Msa0608060 AT4G23990.2 38.350 206 111 4 508 712 2 192 5.78e-31 129
Msa0608060 AT4G24000.2 36.667 210 108 4 508 716 2 187 2.48e-29 124
Msa0608060 AT4G24000.2 26.899 316 215 9 814 1120 214 522 3.51e-28 121

Find 317 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAATTCTCGAAGAAATT+TGG 0.083180 4_2:-55064670 Msa0608060:CDS
TTTAGAAGGTTTGCTCTTTA+TGG 0.101361 4_2:-55064838 Msa0608060:CDS
TGTCTATAGTTTGTGAATTA+TGG 0.184274 4_2:-55066383 Msa0608060:CDS
CCAAGTGACGAACCTCTTAT+TGG 0.185694 4_2:-55065261 Msa0608060:CDS
TCAAGTTCTGTGTTCTTATA+TGG 0.231354 4_2:+55067297 None:intergenic
GAATTGCAGGATATTAATTT+AGG 0.236683 4_2:-55067865 Msa0608060:intron
CTGCTAGCTTTGCTAATAAC+TGG 0.239243 4_2:-55066062 Msa0608060:CDS
CACAATTCTCGAAGAAATTT+GGG 0.254749 4_2:-55064669 Msa0608060:CDS
AGTAAATAATAAATATTTCT+TGG 0.255897 4_2:+55063336 None:intergenic
CTGAAGAAATTTCATTCTTC+GGG 0.263526 4_2:+55064237 None:intergenic
CTGCTCATTTGTAATGATTT+CGG 0.270301 4_2:+55067816 None:intergenic
CTACGATCCTTCACGAAATC+AGG 0.281388 4_2:+55065949 None:intergenic
TTTAAGCTGAAGTATGATTC+AGG 0.288122 4_2:+55066000 None:intergenic
GACTTTCCTGTAGGATTGTT+AGG 0.288935 4_2:+55066261 None:intergenic
GCCGGTAGTGCTTGTAGTTT+TGG 0.297059 4_2:-55069125 Msa0608060:five_prime_UTR
ATGGATAAATTCCAACATTA+AGG 0.302386 4_2:+55064203 None:intergenic
TGAAACATCAGAGACAAAAT+AGG 0.307298 4_2:-55065819 Msa0608060:CDS
CCTCAAACCTTTGAGGGAAT+TGG 0.310418 4_2:+55064971 None:intergenic
CAGTCGAGGTTAAGTATAAA+AGG 0.311934 4_2:+55065078 None:intergenic
TCTGAAGAAATTTCATTCTT+CGG 0.312803 4_2:+55064236 None:intergenic
AAAGAGGCTTCGTACCGATA+TGG 0.318012 4_2:+55066964 None:intergenic
CTCTTGTGTTGTTCCTGCAC+TGG 0.319012 4_2:-55066449 Msa0608060:CDS
CATCTAGCTGCCGTGCTTCA+AGG 0.325137 4_2:-55063959 Msa0608060:CDS
TCTTGCTATGTTTCTGATGA+TGG 0.327737 4_2:-55066120 Msa0608060:CDS
GAAAGATGCGCGGTCTTCTT+TGG 0.328423 4_2:+55064798 None:intergenic
TATATAGATGCAGTGAAAAT+AGG 0.334238 4_2:-55067348 Msa0608060:CDS
AGATCTGTAGAACGATTTAC+TGG 0.334409 4_2:+55066318 None:intergenic
CCTGTAGGATTGTTAGGACT+TGG 0.340116 4_2:+55066267 None:intergenic
CTTTCTGTAGTTGTTGCTTT+GGG 0.345629 4_2:-55064780 Msa0608060:CDS
CAGCGTGTTGGATGGATCTA+TGG 0.346588 4_2:-55064454 Msa0608060:CDS
CCTGCACTGTCCCTCTTCTC+TGG 0.348700 4_2:-55064145 Msa0608060:CDS
CCACAGATGGCTGGTGCAAA+AGG 0.351106 4_2:-55067474 Msa0608060:CDS
GGCTCTAACCAATGCATTCA+TGG 0.354035 4_2:+55065122 None:intergenic
AATTATGGTTTGCTTTCTCT+TGG 0.355498 4_2:-55066368 Msa0608060:CDS
TGGCCAAAGGAAGGGGATTT+CGG 0.355911 4_2:-55067087 Msa0608060:CDS
ATACGGATGCAGTCTGGTTA+TGG 0.356092 4_2:-55066410 Msa0608060:CDS
CACTGAGTTGTTGAGTCAAA+AGG 0.360198 4_2:+55063457 None:intergenic
GAACCGGCTGTCTGTTTAGA+AGG 0.363424 4_2:-55064852 Msa0608060:CDS
GATCTCATTGGCCAGGGACT+TGG 0.363673 4_2:-55065741 Msa0608060:CDS
TCATCAGCATTTCCAATAAG+AGG 0.368690 4_2:+55065249 None:intergenic
ATCTTCAACTTCCTTGTTAG+TGG 0.370383 4_2:+55067006 None:intergenic
GGTGGAGAAATGAGCAGTTT+TGG 0.370436 4_2:-55064003 Msa0608060:CDS
TATTCCTGGCTGTGATTCTA+AGG 0.372247 4_2:-55067439 Msa0608060:CDS
GAAACATCAGAGACAAAATA+GGG 0.374954 4_2:-55065818 Msa0608060:CDS
CCACTGGAATTGAGTCAATA+AGG 0.376702 4_2:+55064635 None:intergenic
TCTTTCTGTAGTTGTTGCTT+TGG 0.377041 4_2:-55064781 Msa0608060:CDS
TTATATGGCTCTTTGCATCC+TGG 0.379237 4_2:+55067312 None:intergenic
ATTGGAATGAACCGCCTATC+TGG 0.379517 4_2:+55063552 None:intergenic
ACAGGAAAGTCTGATCTTCC+AGG 0.381120 4_2:-55066249 Msa0608060:CDS
CTGTGGTATGGTACTGTATA+TGG 0.381309 4_2:+55063757 None:intergenic
TGACCATGCTGGCATAATTC+AGG 0.385671 4_2:-55065689 Msa0608060:intron
TTCACCTTGACTTCAAAATC+TGG 0.386447 4_2:-55063902 Msa0608060:CDS
TGAGCTATCATCATGGGAAT+TGG 0.386882 4_2:+55063534 None:intergenic
ACAAGTGGTGGTTCTTTCTC+AGG 0.387209 4_2:+55066198 None:intergenic
TGAACCTTTATAGGCTCAAC+AGG 0.387620 4_2:+55065787 None:intergenic
TATTACCCGTGCACATCTAA+TGG 0.387787 4_2:-55067526 Msa0608060:CDS
TACGGATGCAGTCTGGTTAT+GGG 0.391001 4_2:-55066409 Msa0608060:CDS
TTTGAAACAAAGGGGACATA+TGG 0.392709 4_2:-55067126 Msa0608060:CDS
CAATCATCATATCACTCCTC+TGG 0.393066 4_2:-55063604 Msa0608060:CDS
GGGTCGAAATGTGCTATTCC+TGG 0.393677 4_2:-55067453 Msa0608060:CDS
CATACCTTCCCTCATTGCTT+TGG 0.393894 4_2:+55065035 None:intergenic
TATATGGCTCTTTGCATCCT+GGG 0.396880 4_2:+55067313 None:intergenic
TTTCCGAAATCCCCTTCCTT+TGG 0.396984 4_2:+55067084 None:intergenic
GGTTTACTCAAAGTCGTTGC+AGG 0.397549 4_2:-55063938 Msa0608060:CDS
GGTTGCATCAGGTTCTTAGA+TGG 0.399286 4_2:-55064312 Msa0608060:CDS
AGGATGTGGTCACTGGTTAT+AGG 0.400288 4_2:-55064420 Msa0608060:CDS
ATTTCGTGAAGGATCGTAGA+AGG 0.405871 4_2:-55065945 Msa0608060:CDS
CCACAGTGGAGCCGTTTACT+AGG 0.414674 4_2:-55063740 Msa0608060:CDS
CCAATAAGAGGTTCGTCACT+TGG 0.415198 4_2:+55065261 None:intergenic
AAATGTTACGGTTGGATGTA+AGG 0.415264 4_2:+55067746 None:intergenic
CTTCCACTTCCTCCACCAAA+TGG 0.415305 4_2:-55067246 Msa0608060:CDS
TTCCACTTCCTCCACCAAAT+GGG 0.415672 4_2:-55067245 Msa0608060:CDS
TTCACCATCATGATTACAAT+TGG 0.416130 4_2:+55063812 None:intergenic
AAGGAAGGGGATTTCGGAAA+TGG 0.422255 4_2:-55067081 Msa0608060:CDS
CGATGGTTGTTTGAAACAAA+GGG 0.424075 4_2:-55067135 Msa0608060:CDS
CCTGTTCTCTTCTGAGGTGT+TGG 0.424667 4_2:+55064738 None:intergenic
TAGCAAGAAAGCTTCTCAAC+TGG 0.431099 4_2:+55066135 None:intergenic
CTCGCTATCAAGATCATCTC+TGG 0.432065 4_2:+55067686 None:intergenic
ACGATTTACTGGGCATAGCT+TGG 0.434973 4_2:+55066329 None:intergenic
TTACATCCAACCGTAACATT+TGG 0.435589 4_2:-55067744 Msa0608060:CDS
GTTTCAAGTTCTCTATTCAC+TGG 0.442653 4_2:-55067561 Msa0608060:CDS
GAGTTCAAGGTCAGAATCAA+TGG 0.444934 4_2:-55065904 Msa0608060:CDS
TTACAATTGGCGGTATCATA+AGG 0.446340 4_2:+55063825 None:intergenic
GATGAAGTGGCTGTGAATAA+TGG 0.446503 4_2:-55067276 Msa0608060:CDS
ATATAAGAAGTGGTCTGGTT+TGG 0.446888 4_2:+55069019 None:intergenic
CGATTTACTGGGCATAGCTT+GGG 0.447505 4_2:+55066330 None:intergenic
CCAACACCTCAGAAGAGAAC+AGG 0.449199 4_2:-55064738 Msa0608060:CDS
AGAAAACACCGCCTAGTAAA+CGG 0.449652 4_2:+55063729 None:intergenic
TTGAGATCTATGTGTGAAAA+GGG 0.451569 4_2:+55068910 None:intergenic
GTATCCATAGGTTGGTTATC+CGG 0.451756 4_2:+55067615 None:intergenic
ATGGTTATGGCAATGCAATA+TGG 0.453385 4_2:-55067107 Msa0608060:CDS
CTCAACTTTCTGCGAGATTG+AGG 0.454526 4_2:+55067593 None:intergenic
CTGCTGTTCTCAGCCCATAT+CGG 0.455177 4_2:-55066978 Msa0608060:intron
GGCCCAGTCTATGTAGGAAC+CGG 0.456340 4_2:-55064868 Msa0608060:CDS
AAGAGGCTTCGTACCGATAT+GGG 0.460765 4_2:+55066965 None:intergenic
GTGTTATATAAGAAGTGGTC+TGG 0.463844 4_2:+55069014 None:intergenic
TTCCTTGTTAGTGGCCTCCA+TGG 0.464132 4_2:+55067015 None:intergenic
GTTAACATGAGAGCCCTTGA+TGG 0.465182 4_2:-55064898 Msa0608060:CDS
AGAGCCCTTGATGGACTTCA+AGG 0.467889 4_2:-55064889 Msa0608060:CDS
TTGCTGTGCTTGAAATTAAG+TGG 0.468667 4_2:-55064048 Msa0608060:CDS
TGCAATATGGCCAAAGGAAG+GGG 0.469151 4_2:-55067094 Msa0608060:CDS
TTGTGTTGTTCCTGCACTGG+AGG 0.472550 4_2:-55066446 Msa0608060:CDS
GCTGATGGATCTCATTGGCC+AGG 0.474596 4_2:-55065748 Msa0608060:CDS
GCGCTGATGAGAAGTCAAAC+TGG 0.475372 4_2:-55067174 Msa0608060:CDS
TGAACCTGTTGAGCCTATAA+AGG 0.476618 4_2:-55065791 Msa0608060:CDS
AGTTCTTCGGCCAAATGTTA+CGG 0.477640 4_2:+55067734 None:intergenic
TCAATACCCTCAAACCTTTG+AGG 0.479344 4_2:+55064964 None:intergenic
CAGGTTCTTAGATGGGCTAC+TGG 0.479590 4_2:-55064304 Msa0608060:CDS
AAGTATGATTCAGGATTCCT+AGG 0.480013 4_2:+55066009 None:intergenic
CAGCCGGTTCCTACATAGAC+TGG 0.480738 4_2:+55064865 None:intergenic
CTCCCATCAATCTCACTGAT+AGG 0.482130 4_2:-55064333 Msa0608060:CDS
ACTGAGTTGTTGAGTCAAAA+GGG 0.482370 4_2:+55063458 None:intergenic
ACAAAGGGGACATATGGTTA+TGG 0.484592 4_2:-55067120 Msa0608060:CDS
GATGATCTTGATAGCGAGCT+AGG 0.485096 4_2:-55067681 Msa0608060:CDS
GTTTCTAGAGAGAAACGTCC+AGG 0.486844 4_2:-55065171 Msa0608060:CDS
TCTCACTGATAGGTTGCATC+AGG 0.486920 4_2:-55064323 Msa0608060:CDS
TAGGCTCGATATCATGTTTG+CGG 0.489488 4_2:+55066028 None:intergenic
CTACCTTGGAACTGTGCCAC+TGG 0.489823 4_2:+55064619 None:intergenic
CAACCTATCAGTGAGATTGA+TGG 0.492695 4_2:+55064330 None:intergenic
CTCTAGAAACATAAACAAGA+AGG 0.493620 4_2:+55065184 None:intergenic
AGAAGTGGTCTGGTTTGGTC+AGG 0.493802 4_2:+55069024 None:intergenic
TATCTTATAATCACACTCAC+AGG 0.494707 4_2:+55067383 None:intergenic
TACAATTGGCGGTATCATAA+GGG 0.495010 4_2:+55063826 None:intergenic
CAATTCCCTCAAAGGTTTGA+GGG 0.496074 4_2:-55064970 Msa0608060:CDS
AGAGAACAGGGCACTAAGGA+TGG 0.496324 4_2:-55064725 Msa0608060:CDS
CAATACCCTCAAACCTTTGA+GGG 0.496350 4_2:+55064965 None:intergenic
GCGTGAGTATGATGAGTTCA+AGG 0.499184 4_2:-55065917 Msa0608060:CDS
CCAATTCCCTCAAAGGTTTG+AGG 0.503080 4_2:-55064971 Msa0608060:CDS
AGGATAGCATACCTTAATGT+TGG 0.504124 4_2:-55064214 Msa0608060:CDS
CACTCAAGGGGTGACCATGC+TGG 0.505226 4_2:-55065700 Msa0608060:CDS
TACAGATCTTAATGTTCTGA+AGG 0.506905 4_2:-55066304 Msa0608060:CDS
ATAAGAGGTTCGTCACTTGG+AGG 0.510639 4_2:+55065264 None:intergenic
GTTACTGAGGATGTGGTCAC+TGG 0.513628 4_2:-55064427 Msa0608060:CDS
TTTGAGATCTATGTGTGAAA+AGG 0.514910 4_2:+55068909 None:intergenic
TTGTTAGTGGCCTCCATGGT+CGG 0.516200 4_2:+55067019 None:intergenic
GACGGATATCAACATCGGTC+AGG 0.516786 4_2:+55065211 None:intergenic
TAGTGCCCTGTTCTCTTCTG+AGG 0.517277 4_2:+55064732 None:intergenic
CGAGGTATAGTGAGAGCACC+AGG 0.517290 4_2:+55064556 None:intergenic
CCTATCTGGTCTGTACCGGC+TGG 0.517796 4_2:+55063566 None:intergenic
TTAGGATCAATCTTTGACCT+CGG 0.518076 4_2:-55067847 Msa0608060:five_prime_UTR
TCGATGGTTGTTTGAAACAA+AGG 0.518208 4_2:-55067136 Msa0608060:CDS
AAAGAGTGTTATATAAGAAG+TGG 0.518228 4_2:+55069009 None:intergenic
ACACTTCACCTGAGCACTCA+AGG 0.518949 4_2:-55065714 Msa0608060:CDS
TATGTGTGACCCTCCAGTGC+AGG 0.520114 4_2:+55066436 None:intergenic
TCTAGAAACATAAACAAGAA+GGG 0.520713 4_2:+55065185 None:intergenic
TGTGATTTCATGTTGGTATG+AGG 0.522119 4_2:-55064494 Msa0608060:CDS
CCAAGTCCTAACAATCCTAC+AGG 0.524144 4_2:-55066267 Msa0608060:CDS
TGGTCACCCCTTGAGTGCTC+AGG 0.524163 4_2:+55065706 None:intergenic
TGTGTTGTTCCTGCACTGGA+GGG 0.524336 4_2:-55066445 Msa0608060:CDS
GATCAGCAAGTGGCCTACCT+TGG 0.525030 4_2:+55064605 None:intergenic
CTTCGGCCAAATGTTACGGT+TGG 0.525516 4_2:+55067738 None:intergenic
TTTGGTGGAGGAAGTGGAAG+TGG 0.525761 4_2:+55067249 None:intergenic
GAACACAGAACTTGATGAAG+TGG 0.527152 4_2:-55067289 Msa0608060:CDS
GACAGAGAACGAGTAATCTT+CGG 0.528240 4_2:+55069097 None:intergenic
CCAGAGAAGAGGGACAGTGC+AGG 0.528514 4_2:+55064145 None:intergenic
GAATGCATTGGTTAGAGCCT+CGG 0.531865 4_2:-55065118 Msa0608060:CDS
ATCGACCGGATGAAGTTCTT+CGG 0.533914 4_2:+55067721 None:intergenic
ACCATCATGATTACAATTGG+CGG 0.535365 4_2:+55063815 None:intergenic
AGAAGAGGGACAGTGCAGGC+AGG 0.535477 4_2:+55064149 None:intergenic
TGGATCAGTTACTGAGGATG+TGG 0.535501 4_2:-55064434 Msa0608060:CDS
GGAAGGTATGTGCTTTATGA+TGG 0.536478 4_2:-55065022 Msa0608060:CDS
GTGCTTGAAATTAAGTGGTC+AGG 0.536523 4_2:-55064043 Msa0608060:CDS
CAGAAGAGAACAGGGCACTA+AGG 0.537635 4_2:-55064729 Msa0608060:CDS
CTGATCTGTATATTGTCAAA+TGG 0.537846 4_2:-55063853 Msa0608060:CDS
TCCACTTCCTCCACCAAATG+GGG 0.538875 4_2:-55067244 Msa0608060:CDS
TCACGCAAGAGAGGAAATCA+AGG 0.539271 4_2:-55065845 Msa0608060:CDS
TCTTTCAGCGTGTCTTGCAA+AGG 0.539840 4_2:-55069072 Msa0608060:five_prime_UTR
CACAGATGGCTGGTGCAAAA+GGG 0.540028 4_2:-55067473 Msa0608060:CDS
ATCATGATGGTGAACTTGAT+AGG 0.542613 4_2:-55063803 Msa0608060:CDS
AGACTTTGTCGATTTCATCA+AGG 0.542739 4_2:+55067197 None:intergenic
ATAGGAGATGGGATGTGCCC+AGG 0.542804 4_2:-55067330 Msa0608060:CDS
ACCAAAACTACAAGCACTAC+CGG 0.543097 4_2:+55069124 None:intergenic
ATCTGGTCTGTACCGGCTGG+TGG 0.543265 4_2:+55063569 None:intergenic
ATGCAGTGAAAATAGGAGAT+GGG 0.544148 4_2:-55067341 Msa0608060:CDS
GATGCAGTGAAAATAGGAGA+TGG 0.544653 4_2:-55067342 Msa0608060:CDS
GACCTGCGACGGATAGAGTC+GGG 0.544788 4_2:+55065877 None:intergenic
CTGGGCCTTGAAGTCCATCA+AGG 0.544862 4_2:+55064884 None:intergenic
AACCTATCAGTGAGATTGAT+GGG 0.545416 4_2:+55064331 None:intergenic
CTTTATCCATTAGATGTGCA+CGG 0.545565 4_2:+55067520 None:intergenic
TTTGGCCGAAGAACTTCATC+CGG 0.545571 4_2:-55067726 Msa0608060:CDS
AAAGCAACATGGATGGCTGA+TGG 0.546687 4_2:-55065763 Msa0608060:CDS
AAAAGAATGAGCTATCATCA+TGG 0.547173 4_2:+55063527 None:intergenic
TGCTAGCTTTGCTAATAACT+GGG 0.547860 4_2:-55066061 Msa0608060:CDS
GTAAATCATCCACAGATGGC+TGG 0.551375 4_2:-55067483 Msa0608060:CDS
GAAGAATGAAATTTCTTCAG+AGG 0.551800 4_2:-55064234 Msa0608060:CDS
GAAGTGTTCAACCAAGTCCC+TGG 0.552003 4_2:+55065730 None:intergenic
GTTGCATCAGGTTCTTAGAT+GGG 0.553071 4_2:-55064311 Msa0608060:CDS
GATTTCGGAAATGGAAAAGA+TGG 0.553684 4_2:-55067072 Msa0608060:CDS
CACTTCACCTGAGCACTCAA+GGG 0.553733 4_2:-55065713 Msa0608060:CDS
TAAGTGGTCAGGAATTGAGC+TGG 0.554704 4_2:-55064032 Msa0608060:CDS
GCTATGTCCAATTCCCTCAA+AGG 0.554919 4_2:-55064978 Msa0608060:CDS
ATTAGCAAAGCTAGCAGCCT+CGG 0.555719 4_2:+55066068 None:intergenic
AAAGAATGAGCTATCATCAT+GGG 0.557305 4_2:+55063528 None:intergenic
TTTATCCATTAGATGTGCAC+GGG 0.557966 4_2:+55067521 None:intergenic
CATAAACAAGAAGGGGAAGA+CGG 0.558483 4_2:+55065193 None:intergenic
AGCTGGGGCCATGAATGCAT+TGG 0.558654 4_2:-55065130 Msa0608060:CDS
AAAGGTTTGATGGGAAGAAG+AGG 0.558986 4_2:-55063668 Msa0608060:CDS
CCAGCCGGTACAGACCAGAT+AGG 0.559093 4_2:-55063566 Msa0608060:CDS
CTTCAAGGCCCAGTCTATGT+AGG 0.559242 4_2:-55064874 Msa0608060:CDS
TAAACGGCTCCACTGTGGTA+TGG 0.560372 4_2:+55063745 None:intergenic
CACTCCGGATAACCAACCTA+TGG 0.561400 4_2:-55067619 Msa0608060:CDS
AAGGTTTGATGGGAAGAAGA+GGG 0.561777 4_2:-55063667 Msa0608060:CDS
CAATGAACTGTCCAGAGAAG+AGG 0.562988 4_2:+55064134 None:intergenic
GCGCGGTCTTCTTTGGCGCG+TGG 0.563034 4_2:+55064805 None:intergenic
GTTAAGTATAAAAGGACCGT+TGG 0.563607 4_2:+55065086 None:intergenic
ATATCATGTTTGCGGCAGAA+TGG 0.564407 4_2:+55066036 None:intergenic
GAAACAAAGATATCTATGCC+TGG 0.564484 4_2:+55066231 None:intergenic
GGTTATAGGATGCATAATAG+AGG 0.564782 4_2:-55064406 Msa0608060:CDS
TCAAGTTCTCTATTCACTGG+AGG 0.565971 4_2:-55067558 Msa0608060:CDS
TGCGAGATTGAGGTATCCAT+AGG 0.569033 4_2:+55067603 None:intergenic
ATATAACTCCAAAGCAATGA+GGG 0.569533 4_2:-55065043 Msa0608060:CDS
CAGGAATTGAGCTGGAAGAA+TGG 0.570277 4_2:-55064024 Msa0608060:CDS
TGCCCGACTCTATCCGTCGC+AGG 0.570541 4_2:-55065879 Msa0608060:CDS
AGATTGAGGTATCCATAGGT+TGG 0.571127 4_2:+55067607 None:intergenic
CACTTCCTCCACCAAATGGG+GGG 0.571997 4_2:-55067242 Msa0608060:CDS
TGCTATGTTTCTGATGATGG+AGG 0.573867 4_2:-55066117 Msa0608060:CDS
AATCATCATATCACTCCTCT+GGG 0.574992 4_2:-55063603 Msa0608060:CDS
CTAGAAACATAAACAAGAAG+GGG 0.575023 4_2:+55065186 None:intergenic
ACAACACAAGAGCAACCAAA+CGG 0.577597 4_2:+55066460 None:intergenic
ATAGGATGCATAATAGAGGA+TGG 0.578268 4_2:-55064402 Msa0608060:CDS
AATGTTACGGTTGGATGTAA+GGG 0.578477 4_2:+55067747 None:intergenic
CTGAATTGATGAGCCGACCA+TGG 0.579321 4_2:-55067032 Msa0608060:CDS
CTGATGGATCTCATTGGCCA+GGG 0.579469 4_2:-55065747 Msa0608060:CDS
AGCAGCTAAAATCGACAAGA+TGG 0.579662 4_2:+55066164 None:intergenic
TGTCTTGCAAAGGTGACAGT+TGG 0.580465 4_2:-55069062 Msa0608060:five_prime_UTR
GATGGGAGCAGTTCCGCGGA+AGG 0.581406 4_2:+55064348 None:intergenic
ATCACCTTAGAATCACAGCC+AGG 0.581701 4_2:+55067435 None:intergenic
GGTCGGCTCATCAATTCAGT+TGG 0.582914 4_2:+55067036 None:intergenic
AAGAAATTTCATTCTTCGGG+TGG 0.585093 4_2:+55064240 None:intergenic
AATGAACTGTCCAGAGAAGA+GGG 0.585838 4_2:+55064135 None:intergenic
ATTCCAGTGGCACAGTTCCA+AGG 0.587403 4_2:-55064622 Msa0608060:CDS
TTGTGTTAATGATTTATGAA+AGG 0.587792 4_2:+55068872 None:intergenic
GTGTTTGCTGTGACAAGTGG+TGG 0.588452 4_2:+55066186 None:intergenic
CGGTCTTCTTTGGCGCGTGG+AGG 0.588737 4_2:+55064808 None:intergenic
GCCTCGGCTGTCATGTCCAA+CGG 0.589027 4_2:-55065102 Msa0608060:CDS
CATAGGTTGGTTATCCGGAG+TGG 0.589102 4_2:+55067620 None:intergenic
ATAGGTTGGTTATCCGGAGT+GGG 0.590129 4_2:+55067621 None:intergenic
ACTAAACGCGACGCCTTCCG+CGG 0.591532 4_2:-55064361 Msa0608060:CDS
ACGGATGCAGTCTGGTTATG+GGG 0.591620 4_2:-55066408 Msa0608060:CDS
CCACTTCCTCCACCAAATGG+GGG 0.592808 4_2:-55067243 Msa0608060:CDS
GGAGTAACTGATGTATCGAC+CGG 0.593019 4_2:+55067707 None:intergenic
AATGCAATATGGCCAAAGGA+AGG 0.593345 4_2:-55067096 Msa0608060:CDS
ATGCAATATGGCCAAAGGAA+GGG 0.595431 4_2:-55067095 Msa0608060:CDS
TATATAACTCCAAAGCAATG+AGG 0.595884 4_2:-55065044 Msa0608060:CDS
GAGAACAGGGCACTAAGGAT+GGG 0.596261 4_2:-55064724 Msa0608060:CDS
CTCAATCTCGCAGAAAGTTG+AGG 0.597849 4_2:-55067592 Msa0608060:CDS
GGATGGCTGATGGATCTCAT+TGG 0.599838 4_2:-55065753 Msa0608060:CDS
ACCGCCTATCTGGTCTGTAC+CGG 0.600209 4_2:+55063562 None:intergenic
AACTCCAAAGCAATGAGGGA+AGG 0.600336 4_2:-55065039 Msa0608060:CDS
TGAAGTAAATCATCCACAGA+TGG 0.601911 4_2:-55067487 Msa0608060:CDS
CCATCAGTGTGATTTCATGT+TGG 0.602601 4_2:-55064501 Msa0608060:CDS
GACCATGGAGGCCACTAACA+AGG 0.603471 4_2:-55067017 Msa0608060:CDS
CCAACATGAAATCACACTGA+TGG 0.603494 4_2:+55064501 None:intergenic
CAGTGGCACAGTTCCAAGGT+AGG 0.604559 4_2:-55064618 Msa0608060:CDS
TATGGGCTGAGAACAGCAGC+AGG 0.606682 4_2:+55066982 None:intergenic
GTTTGATGGGAAGAAGAGGG+AGG 0.608204 4_2:-55063664 Msa0608060:CDS
AGTGGGGACAGCGTGTTGGA+TGG 0.609266 4_2:-55064462 Msa0608060:CDS
GTGATTAGCATATCTATCAG+AGG 0.610027 4_2:+55064939 None:intergenic
CATGTTAACATCAAAGAAGA+CGG 0.610600 4_2:+55064912 None:intergenic
ACCTTGACTTCAAAATCTGG+CGG 0.612483 4_2:-55063899 Msa0608060:CDS
AGCCGGTTCCTACATAGACT+GGG 0.616227 4_2:+55064866 None:intergenic
ACTGAGTGGGGACAGCGTGT+TGG 0.616731 4_2:-55064466 Msa0608060:CDS
TGGGCCTTGAAGTCCATCAA+GGG 0.617779 4_2:+55064885 None:intergenic
GTATGAGGACAAGACTGAGT+GGG 0.618939 4_2:-55064479 Msa0608060:CDS
AAACCTTCTAAACAGACAGC+CGG 0.619310 4_2:+55064849 None:intergenic
TTTGAGTAAACCTTGAAGCA+CGG 0.620499 4_2:+55063949 None:intergenic
GTGGCTATCAATCCACCAGC+CGG 0.620559 4_2:-55063581 Msa0608060:CDS
GAATTGAGCTGGAAGAATGG+TGG 0.621397 4_2:-55064021 Msa0608060:CDS
TGGCAATGCAATATGGCCAA+AGG 0.629077 4_2:-55067100 Msa0608060:CDS
GTTACGGTTGGATGTAAGGG+AGG 0.629747 4_2:+55067750 None:intergenic
CCTTATTGACTCAATTCCAG+TGG 0.630704 4_2:-55064635 Msa0608060:CDS
GCAAACATGATATCGAGCCT+AGG 0.632131 4_2:-55066026 Msa0608060:CDS
TGATTAGCATATCTATCAGA+GGG 0.632288 4_2:+55064940 None:intergenic
GTACCTGAATTATGCCAGCA+TGG 0.632566 4_2:+55065686 None:intergenic
GGAAGATCAGACTTTCCTGT+AGG 0.633422 4_2:+55066252 None:intergenic
AGTGCACTTACCACCCACTC+CGG 0.636922 4_2:-55067634 Msa0608060:CDS
TGATTTCGGCTTCATATCCG+AGG 0.637153 4_2:+55067830 None:intergenic
GAGGGAATTGGACATAGCAG+AGG 0.637180 4_2:+55064983 None:intergenic
GAAAAGCATCTGACCTGCGA+CGG 0.637406 4_2:+55065866 None:intergenic
ACTTCACCTGAGCACTCAAG+GGG 0.638545 4_2:-55065712 Msa0608060:CDS
AGTGAAACCTGATTTCGTGA+AGG 0.639967 4_2:-55065956 Msa0608060:CDS
ACCGCCAATTGTAATCATGA+TGG 0.640166 4_2:-55063816 Msa0608060:CDS
TGACCTGCGACGGATAGAGT+CGG 0.641736 4_2:+55065876 None:intergenic
CAACACCTCAGAAGAGAACA+GGG 0.642386 4_2:-55064737 Msa0608060:CDS
GAGACTTTGATCACAATCGA+TGG 0.649293 4_2:-55067152 Msa0608060:CDS
ATATATAGTGATCACAGTCG+AGG 0.658364 4_2:+55065064 None:intergenic
GGTTGGTTATCCGGAGTGGG+TGG 0.659629 4_2:+55067624 None:intergenic
AACTTGATAGGAATAGCTGT+CGG 0.663058 4_2:-55063791 Msa0608060:CDS
GAAGTGGCTGTGAATAATGG+AGG 0.663961 4_2:-55067273 Msa0608060:CDS
GATTGATGGGAGCAGTTCCG+CGG 0.664180 4_2:+55064344 None:intergenic
ACAGCAGGATGATCAGCAAG+TGG 0.664216 4_2:+55064595 None:intergenic
GATCTGTAGAACGATTTACT+GGG 0.665434 4_2:+55066319 None:intergenic
GATGCATCAAGCAGCTCACG+AGG 0.667606 4_2:+55064538 None:intergenic
ATGGTGTTTGCTGTGACAAG+TGG 0.672708 4_2:+55066183 None:intergenic
ACCGTTGGACATGACAGCCG+AGG 0.677629 4_2:+55065101 None:intergenic
CATCATATCACTCCTCTGGG+TGG 0.679038 4_2:-55063600 Msa0608060:CDS
ATCTTATAATCACACTCACA+GGG 0.682477 4_2:+55067384 None:intergenic
GATCTATGGATCAGTTACTG+AGG 0.682987 4_2:-55064440 Msa0608060:CDS
GATGGTTGTTTGAAACAAAG+GGG 0.686620 4_2:-55067134 Msa0608060:CDS
GTGTCACAGTAATAGCCAAG+AGG 0.689192 4_2:+55064080 None:intergenic
GGGAAGACGGATATCAACAT+CGG 0.693709 4_2:+55065206 None:intergenic
GCCGGTACAGACCAGATAGG+CGG 0.695938 4_2:-55063563 Msa0608060:CDS
ATGTGCTTTATGATGGATCG+TGG 0.700304 4_2:-55065015 Msa0608060:CDS
CAGTGGAGCCGTTTACTAGG+CGG 0.700615 4_2:-55063737 Msa0608060:CDS
AAACATCAGAGACAAAATAG+GGG 0.704908 4_2:-55065817 Msa0608060:CDS
TATGAGGACAAGACTGAGTG+GGG 0.705596 4_2:-55064478 Msa0608060:CDS
GCTGCTTGATGCATCAACTG+TGG 0.710663 4_2:-55064530 Msa0608060:CDS
AACAACTACAGAAAGATGCG+CGG 0.723770 4_2:+55064788 None:intergenic
TGCTTTATGATGGATCGTGG+TGG 0.732320 4_2:-55065012 Msa0608060:CDS
GGTATGAGGACAAGACTGAG+TGG 0.734815 4_2:-55064480 Msa0608060:CDS
AATTGATGAGCCGACCATGG+AGG 0.735033 4_2:-55067029 Msa0608060:CDS
AAGTGGCTGTGAATAATGGA+GGG 0.736494 4_2:-55067272 Msa0608060:CDS
GTGGATTGATAGCCACCCAG+AGG 0.737395 4_2:+55063588 None:intergenic
GGTATAGTGAGAGCACCAGG+AGG 0.763552 4_2:+55064559 None:intergenic
CCTAGTAAACGGCTCCACTG+TGG 0.766308 4_2:+55063740 None:intergenic
TATACAGTACCATACCACAG+TGG 0.814916 4_2:-55063754 Msa0608060:CDS
AAGGTGATGAGTGATGAACG+TGG 0.906383 4_2:-55067420 Msa0608060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAGTTTTTTTTTTG+TGG - chr4_2:55063787-55063806 Msa0608060:CDS 10.0%
!!! AAAAAAAGTTTTTTTTTTGT+GGG - chr4_2:55063788-55063807 Msa0608060:CDS 10.0%
!!! TATATTCTTATTTTGAATAA+TGG - chr4_2:55064300-55064319 Msa0608060:CDS 10.0%
!! AGTAAATAATAAATATTTCT+TGG + chr4_2:55069102-55069121 None:intergenic 10.0%
!!! AAAAAAGTTTTTTTTTTGTG+GGG - chr4_2:55063789-55063808 Msa0608060:CDS 15.0%
!! TATTGAAAATAATAGAAGAA+TGG - chr4_2:55065694-55065713 Msa0608060:CDS 15.0%
!! AAAAAAAAAAAAAGCTAAGT+TGG - chr4_2:55067100-55067119 Msa0608060:CDS 15.0%
!! AAAAAAAAATTAAACTCCAA+AGG + chr4_2:55068954-55068973 None:intergenic 15.0%
!! TTGTGTTAATGATTTATGAA+AGG + chr4_2:55063566-55063585 None:intergenic 20.0%
!! TAAAGCATGATTAAGAAAAA+GGG + chr4_2:55063634-55063653 None:intergenic 20.0%
!! ATAAAGCATGATTAAGAAAA+AGG + chr4_2:55063635-55063654 None:intergenic 20.0%
!!! TTAATCATGCTTTATTTTAG+TGG - chr4_2:55063640-55063659 Msa0608060:CDS 20.0%
!!! TAATCATGCTTTATTTTAGT+GGG - chr4_2:55063641-55063660 Msa0608060:CDS 20.0%
!! AGAAAAAACAATGAAACTAT+AGG + chr4_2:55064147-55064166 None:intergenic 20.0%
!! TAACAGAGAGAAATATTTAA+AGG + chr4_2:55064402-55064421 None:intergenic 20.0%
!!! CTGTTATTATAATACTTTTG+AGG - chr4_2:55064416-55064435 Msa0608060:CDS 20.0%
!!! AAAAAGCATCTAATAAAAAG+AGG + chr4_2:55065490-55065509 None:intergenic 20.0%
!!! TCCATTTTTATGTTTCATTT+TGG - chr4_2:55065551-55065570 Msa0608060:intron 20.0%
!! ATAATAGATTGCATTCAAAT+TGG + chr4_2:55065592-55065611 None:intergenic 20.0%
!!! CTGAAACTTTAAAAAAATGA+TGG - chr4_2:55065614-55065633 Msa0608060:intron 20.0%
!! AATAATAGAAGAATGGAAAT+TGG - chr4_2:55065701-55065720 Msa0608060:CDS 20.0%
!! TAAAACAAGCTGATATAATA+TGG + chr4_2:55065837-55065856 None:intergenic 20.0%
!!! ATGTACTGCTTTTAATTATA+AGG - chr4_2:55065856-55065875 Msa0608060:CDS 20.0%
!! TCTGGAAGAAAATAATATAT+CGG + chr4_2:55066948-55066967 None:intergenic 20.0%
!!! AGATTATTACAATTTTCCTT+TGG - chr4_2:55068935-55068954 Msa0608060:five_prime_UTR 20.0%
!!! AAAGAGTGTTATATAAGAAG+TGG + chr4_2:55063429-55063448 None:intergenic 25.0%
! AATTAAGCTGAAAAATGAGT+TGG + chr4_2:55063602-55063621 None:intergenic 25.0%
! AAAGCATGATTAAGAAAAAG+GGG + chr4_2:55063633-55063652 None:intergenic 25.0%
!!! AATCATGCTTTATTTTAGTG+GGG - chr4_2:55063642-55063661 Msa0608060:CDS 25.0%
!! TTATGAACTTTTTGTGATAG+TGG - chr4_2:55063704-55063723 Msa0608060:CDS 25.0%
! AATATAACCAGTTAGTGATT+TGG + chr4_2:55064286-55064305 None:intergenic 25.0%
!!! AATTGTAAGCTTCTGAAATT+CGG + chr4_2:55064335-55064354 None:intergenic 25.0%
!!! TTAGATTCACTTTTGAACTT+TGG - chr4_2:55064454-55064473 Msa0608060:CDS 25.0%
!! GTGTTAAATTTTTGAATTGC+AGG - chr4_2:55064557-55064576 Msa0608060:CDS 25.0%
! GAATTGCAGGATATTAATTT+AGG - chr4_2:55064570-55064589 Msa0608060:CDS 25.0%
! TATATAGATGCAGTGAAAAT+AGG - chr4_2:55065087-55065106 Msa0608060:CDS 25.0%
! GCCAAAATGAAACATAAAAA+TGG + chr4_2:55065555-55065574 None:intergenic 25.0%
!! TGTCTATAGTTTGTGAATTA+TGG - chr4_2:55066052-55066071 Msa0608060:CDS 25.0%
! CATAAATAGATGTGAGAAAA+TGG + chr4_2:55066877-55066896 None:intergenic 25.0%
! TTTATGTCCAATTCTATTGA+AGG - chr4_2:55066891-55066910 Msa0608060:intron 25.0%
! TTATGTCCAATTCTATTGAA+GGG - chr4_2:55066892-55066911 Msa0608060:intron 25.0%
! ATTCATCAGATATTCATTCT+AGG + chr4_2:55067127-55067146 None:intergenic 25.0%
! TCTAGAAACATAAACAAGAA+GGG + chr4_2:55067253-55067272 None:intergenic 25.0%
!! CTCTAAAAACAATGCAATTA+TGG - chr4_2:55068172-55068191 Msa0608060:intron 25.0%
! TCTGAAGAAATTTCATTCTT+CGG + chr4_2:55068202-55068221 None:intergenic 25.0%
! ATGGATAAATTCCAACATTA+AGG + chr4_2:55068235-55068254 None:intergenic 25.0%
! ATAAGAAAAAACGAAGTGAA+TGG + chr4_2:55068254-55068273 None:intergenic 25.0%
!!! TATTCCAGAAAGTTGTTTTT+AGG - chr4_2:55069046-55069065 Msa0608060:five_prime_UTR 25.0%
! TAGGAATGAAAAATGTTTGA+TGG - chr4_2:55069065-55069084 Msa0608060:five_prime_UTR 25.0%
TTGAGATCTATGTGTGAAAA+GGG + chr4_2:55063528-55063547 None:intergenic 30.0%
! TTTGAGATCTATGTGTGAAA+AGG + chr4_2:55063529-55063548 None:intergenic 30.0%
!!! TTTTTTCTCACCGTGATTAT+CGG + chr4_2:55063771-55063790 None:intergenic 30.0%
! TCTTCATTCTGTTTTCTTCT+TGG - chr4_2:55063892-55063911 Msa0608060:CDS 30.0%
CAACTAGAAAAACTCAAAGT+AGG + chr4_2:55063971-55063990 None:intergenic 30.0%
! AGAATCGAAATAAGCTGTTT+TGG - chr4_2:55064019-55064038 Msa0608060:CDS 30.0%
! AATCTGTGTTGTTCAAATTG+AGG - chr4_2:55064072-55064091 Msa0608060:CDS 30.0%
CAAAAAAAATTGCATCAGCT+TGG + chr4_2:55064182-55064201 None:intergenic 30.0%
TCTGTGTTAAAAAGATGTTG+AGG - chr4_2:55064255-55064274 Msa0608060:CDS 30.0%
! TGATGTGTGTTTGTATGTTT+TGG - chr4_2:55064369-55064388 Msa0608060:CDS 30.0%
CTGCTCATTTGTAATGATTT+CGG + chr4_2:55064622-55064641 None:intergenic 30.0%
ATCTTATAATCACACTCACA+GGG + chr4_2:55065054-55065073 None:intergenic 30.0%
TATCTTATAATCACACTCAC+AGG + chr4_2:55065055-55065074 None:intergenic 30.0%
TCAAGTTCTGTGTTCTTATA+TGG + chr4_2:55065141-55065160 None:intergenic 30.0%
ATAGAAGAATGGAAATTGGA+TGG - chr4_2:55065705-55065724 Msa0608060:CDS 30.0%
! GAAATTGGATGGAAGTTTTA+GGG - chr4_2:55065716-55065735 Msa0608060:CDS 30.0%
!! TCTCATCATTTTTATCCGTT+TGG - chr4_2:55065960-55065979 Msa0608060:CDS 30.0%
!! AATTATGGTTTGCTTTCTCT+TGG - chr4_2:55066067-55066086 Msa0608060:CDS 30.0%
TACAGATCTTAATGTTCTGA+AGG - chr4_2:55066131-55066150 Msa0608060:CDS 30.0%
!!! ACTTTTAACTTTTGAGGCAA+TGG - chr4_2:55066344-55066363 Msa0608060:CDS 30.0%
TTTAAGCTGAAGTATGATTC+AGG + chr4_2:55066438-55066457 None:intergenic 30.0%
!!! GGTTTCACTTTGTTTTTGTA+AGG + chr4_2:55066468-55066487 None:intergenic 30.0%
! ATTTTGTCTCTGATGTTTCA+TGG + chr4_2:55066616-55066635 None:intergenic 30.0%
TGAAACATCAGAGACAAAAT+AGG - chr4_2:55066616-55066635 Msa0608060:intron 30.0%
GAAACATCAGAGACAAAATA+GGG - chr4_2:55066617-55066636 Msa0608060:intron 30.0%
AAACATCAGAGACAAAATAG+GGG - chr4_2:55066618-55066637 Msa0608060:intron 30.0%
!!! GTTGCTTTTTGAACCTTTAT+AGG + chr4_2:55066660-55066679 None:intergenic 30.0%
TAAAGGTTCAAAAAGCAACA+TGG - chr4_2:55066661-55066680 Msa0608060:intron 30.0%
AAATAGATGTGAGAAAATGG+AGG + chr4_2:55066874-55066893 None:intergenic 30.0%
ATTAAACCAGATAACAAGTC+TGG + chr4_2:55066966-55066985 None:intergenic 30.0%
TCCATTGAATCTGTTAAATG+CGG - chr4_2:55066985-55067004 Msa0608060:CDS 30.0%
ATATAAAAACGTTGATGTCG+CGG - chr4_2:55067047-55067066 Msa0608060:CDS 30.0%
! TCTGATGAATGATATTTTGC+AGG - chr4_2:55067137-55067156 Msa0608060:CDS 30.0%
CTAGAAACATAAACAAGAAG+GGG + chr4_2:55067252-55067271 None:intergenic 30.0%
! CTCTAGAAACATAAACAAGA+AGG + chr4_2:55067254-55067273 None:intergenic 30.0%
TATATAACTCCAAAGCAATG+AGG - chr4_2:55067391-55067410 Msa0608060:CDS 30.0%
ATATAACTCCAAAGCAATGA+GGG - chr4_2:55067392-55067411 Msa0608060:CDS 30.0%
TGATTAGCATATCTATCAGA+GGG + chr4_2:55067498-55067517 None:intergenic 30.0%
CATGTTAACATCAAAGAAGA+CGG + chr4_2:55067526-55067545 None:intergenic 30.0%
! TTTAGAAGGTTTGCTCTTTA+TGG - chr4_2:55067597-55067616 Msa0608060:CDS 30.0%
TCACAATTCTCGAAGAAATT+TGG - chr4_2:55067765-55067784 Msa0608060:CDS 30.0%
CACAATTCTCGAAGAAATTT+GGG - chr4_2:55067766-55067785 Msa0608060:CDS 30.0%
CTGAAGAAATTTCATTCTTC+GGG + chr4_2:55068201-55068220 None:intergenic 30.0%
GAAGAATGAAATTTCTTCAG+AGG - chr4_2:55068201-55068220 Msa0608060:intron 30.0%
CTGATCTGTATATTGTCAAA+TGG - chr4_2:55068582-55068601 Msa0608060:intron 30.0%
TTCACCATCATGATTACAAT+TGG + chr4_2:55068626-55068645 None:intergenic 30.0%
AAAGAATGAGCTATCATCAT+GGG + chr4_2:55068910-55068929 None:intergenic 30.0%
AAAAGAATGAGCTATCATCA+TGG + chr4_2:55068911-55068930 None:intergenic 30.0%
CATTCCTAAAAACAACTTTC+TGG + chr4_2:55069053-55069072 None:intergenic 30.0%
ATATAAGAAGTGGTCTGGTT+TGG + chr4_2:55063419-55063438 None:intergenic 35.0%
GTGTTATATAAGAAGTGGTC+TGG + chr4_2:55063424-55063443 None:intergenic 35.0%
ATTACTTCCTTGCACATGAT+TGG - chr4_2:55063730-55063749 Msa0608060:CDS 35.0%
TGAATAGTTGCCGATAATCA+CGG - chr4_2:55063758-55063777 Msa0608060:CDS 35.0%
AGCAATGTAGTGAAGTCAAA+AGG - chr4_2:55063825-55063844 Msa0608060:CDS 35.0%
GCAATGTAGTGAAGTCAAAA+GGG - chr4_2:55063826-55063845 Msa0608060:CDS 35.0%
CAATGTAGTGAAGTCAAAAG+GGG - chr4_2:55063827-55063846 Msa0608060:CDS 35.0%
AATCCTTCATAGATGACTCT+TGG + chr4_2:55063924-55063943 None:intergenic 35.0%
TATGTAAGTGTTTGTTCCTG+AGG - chr4_2:55064494-55064513 Msa0608060:CDS 35.0%
TTAGGATCAATCTTTGACCT+CGG - chr4_2:55064588-55064607 Msa0608060:CDS 35.0%
AATGTTACGGTTGGATGTAA+GGG + chr4_2:55064691-55064710 None:intergenic 35.0%
AAATGTTACGGTTGGATGTA+AGG + chr4_2:55064692-55064711 None:intergenic 35.0%
TTACATCCAACCGTAACATT+TGG - chr4_2:55064691-55064710 Msa0608060:CDS 35.0%
!! GTTTCAAGTTCTCTATTCAC+TGG - chr4_2:55064874-55064893 Msa0608060:CDS 35.0%
TTTATCCATTAGATGTGCAC+GGG + chr4_2:55064917-55064936 None:intergenic 35.0%
CTTTATCCATTAGATGTGCA+CGG + chr4_2:55064918-55064937 None:intergenic 35.0%
TGAAGTAAATCATCCACAGA+TGG - chr4_2:55064948-55064967 Msa0608060:CDS 35.0%
ATGCAGTGAAAATAGGAGAT+GGG - chr4_2:55065094-55065113 Msa0608060:CDS 35.0%
!! AGACTTTGTCGATTTCATCA+AGG + chr4_2:55065241-55065260 None:intergenic 35.0%
! TCGATGGTTGTTTGAAACAA+AGG - chr4_2:55065299-55065318 Msa0608060:intron 35.0%
! CGATGGTTGTTTGAAACAAA+GGG - chr4_2:55065300-55065319 Msa0608060:intron 35.0%
! GATGGTTGTTTGAAACAAAG+GGG - chr4_2:55065301-55065320 Msa0608060:intron 35.0%
! TTTGAAACAAAGGGGACATA+TGG - chr4_2:55065309-55065328 Msa0608060:intron 35.0%
ATGGTTATGGCAATGCAATA+TGG - chr4_2:55065328-55065347 Msa0608060:intron 35.0%
GATTTCGGAAATGGAAAAGA+TGG - chr4_2:55065363-55065382 Msa0608060:intron 35.0%
ATCTTCAACTTCCTTGTTAG+TGG + chr4_2:55065432-55065451 None:intergenic 35.0%
! GGAAATTGGATGGAAGTTTT+AGG - chr4_2:55065715-55065734 Msa0608060:CDS 35.0%
!! ATGATTTTGGAGAAGCAATC+TGG - chr4_2:55065748-55065767 Msa0608060:CDS 35.0%
TAATTGTCAGAACACACATG+CGG + chr4_2:55065922-55065941 None:intergenic 35.0%
TGAGACTGTAACAGAAAGAA+AGG + chr4_2:55065945-55065964 None:intergenic 35.0%
GAGGGTCACACATAAAAATA+CGG - chr4_2:55066008-55066027 Msa0608060:CDS 35.0%
ATAAAAATACGGATGCAGTC+TGG - chr4_2:55066019-55066038 Msa0608060:CDS 35.0%
GATCTGTAGAACGATTTACT+GGG + chr4_2:55066119-55066138 None:intergenic 35.0%
AGATCTGTAGAACGATTTAC+TGG + chr4_2:55066120-55066139 None:intergenic 35.0%
GAAACAAAGATATCTATGCC+TGG + chr4_2:55066207-55066226 None:intergenic 35.0%
! TCTTGCTATGTTTCTGATGA+TGG - chr4_2:55066315-55066334 Msa0608060:CDS 35.0%
!!! AGGTGCACTTTTAACTTTTG+AGG - chr4_2:55066338-55066357 Msa0608060:CDS 35.0%
!! TGCTAGCTTTGCTAATAACT+GGG - chr4_2:55066374-55066393 Msa0608060:CDS 35.0%
AAGTATGATTCAGGATTCCT+AGG + chr4_2:55066429-55066448 None:intergenic 35.0%
TCTCTTCCCTTCAATAGAAT+TGG + chr4_2:55066901-55066920 None:intergenic 35.0%
!! TTTCTTCCAGACTTGTTATC+TGG - chr4_2:55066957-55066976 Msa0608060:intron 35.0%
AAAGTCTGCAATCACAATCT+GGG + chr4_2:55067073-55067092 None:intergenic 35.0%
AAAAGTCTGCAATCACAATC+TGG + chr4_2:55067074-55067093 None:intergenic 35.0%
TCATCAGCATTTCCAATAAG+AGG + chr4_2:55067189-55067208 None:intergenic 35.0%
!! TTTTTGTTGTGATCGTAACC+TGG + chr4_2:55067285-55067304 None:intergenic 35.0%
TACGATCACAACAAAAAAGC+TGG - chr4_2:55067288-55067307 Msa0608060:CDS 35.0%
ACGATCACAACAAAAAAGCT+GGG - chr4_2:55067289-55067308 Msa0608060:CDS 35.0%
GTTAAGTATAAAAGGACCGT+TGG + chr4_2:55067352-55067371 None:intergenic 35.0%
CAGTCGAGGTTAAGTATAAA+AGG + chr4_2:55067360-55067379 None:intergenic 35.0%
ATATATAGTGATCACAGTCG+AGG + chr4_2:55067374-55067393 None:intergenic 35.0%
GTGATTAGCATATCTATCAG+AGG + chr4_2:55067499-55067518 None:intergenic 35.0%
! TCTTTCTGTAGTTGTTGCTT+TGG - chr4_2:55067654-55067673 Msa0608060:CDS 35.0%
!! CTTTCTGTAGTTGTTGCTTT+GGG - chr4_2:55067655-55067674 Msa0608060:CDS 35.0%
TGTGATTTCATGTTGGTATG+AGG - chr4_2:55067941-55067960 Msa0608060:intron 35.0%
GGTTATAGGATGCATAATAG+AGG - chr4_2:55068029-55068048 Msa0608060:intron 35.0%
ATAGGATGCATAATAGAGGA+TGG - chr4_2:55068033-55068052 Msa0608060:intron 35.0%
AACCTATCAGTGAGATTGAT+GGG + chr4_2:55068107-55068126 None:intergenic 35.0%
AAGAAATTTCATTCTTCGGG+TGG + chr4_2:55068198-55068217 None:intergenic 35.0%
AGGATAGCATACCTTAATGT+TGG - chr4_2:55068221-55068240 Msa0608060:intron 35.0%
AAAAAGTGACATCGAGTGTT+TGG + chr4_2:55068328-55068347 None:intergenic 35.0%
!!! AACACTCGATGTCACTTTTT+TGG - chr4_2:55068328-55068347 Msa0608060:intron 35.0%
TTGCTGTGCTTGAAATTAAG+TGG - chr4_2:55068387-55068406 Msa0608060:intron 35.0%
!!! AATGAGCAGTTTTGGTTGAT+TGG - chr4_2:55068440-55068459 Msa0608060:intron 35.0%
TTTGAGTAAACCTTGAAGCA+CGG + chr4_2:55068489-55068508 None:intergenic 35.0%
TTCACCTTGACTTCAAAATC+TGG - chr4_2:55068533-55068552 Msa0608060:intron 35.0%
TACAATTGGCGGTATCATAA+GGG + chr4_2:55068612-55068631 None:intergenic 35.0%
TTACAATTGGCGGTATCATA+AGG + chr4_2:55068613-55068632 None:intergenic 35.0%
ACCATCATGATTACAATTGG+CGG + chr4_2:55068623-55068642 None:intergenic 35.0%
! ATCATGATGGTGAACTTGAT+AGG - chr4_2:55068632-55068651 Msa0608060:intron 35.0%
AACTTGATAGGAATAGCTGT+CGG - chr4_2:55068644-55068663 Msa0608060:intron 35.0%
! CATCTCTATCCTTTTGCAAA+AGG - chr4_2:55068749-55068768 Msa0608060:intron 35.0%
! TCCTTTTGCAAAAGGTTTGA+TGG - chr4_2:55068757-55068776 Msa0608060:intron 35.0%
! CCTTTTGCAAAAGGTTTGAT+GGG - chr4_2:55068758-55068777 Msa0608060:intron 35.0%
GACCATACAAAAACAATGGT+GGG + chr4_2:55068800-55068819 None:intergenic 35.0%
!!! CACCATTGTTTTTGTATGGT+CGG - chr4_2:55068799-55068818 Msa0608060:intron 35.0%
!!! ACCATTGTTTTTGTATGGTC+GGG - chr4_2:55068800-55068819 Msa0608060:intron 35.0%
AATCATCATATCACTCCTCT+GGG - chr4_2:55068832-55068851 Msa0608060:intron 35.0%
ACTGAGTTGTTGAGTCAAAA+GGG + chr4_2:55068980-55068999 None:intergenic 35.0%
GACAGAGAACGAGTAATCTT+CGG + chr4_2:55063341-55063360 None:intergenic 40.0%
CAATCAACCAATCATGTGCA+AGG + chr4_2:55063740-55063759 None:intergenic 40.0%
TGACCAAGAGTCATCTATGA+AGG - chr4_2:55063918-55063937 Msa0608060:CDS 40.0%
GGAATCTCCAAATCACTAAC+TGG - chr4_2:55064276-55064295 Msa0608060:CDS 40.0%
TAAGTGTTTGTTCCTGAGGT+GGG - chr4_2:55064498-55064517 Msa0608060:CDS 40.0%
AGTTCTTCGGCCAAATGTTA+CGG + chr4_2:55064704-55064723 None:intergenic 40.0%
!! GTATCCATAGGTTGGTTATC+CGG + chr4_2:55064823-55064842 None:intergenic 40.0%
! AGATTGAGGTATCCATAGGT+TGG + chr4_2:55064831-55064850 None:intergenic 40.0%
TCAAGTTCTCTATTCACTGG+AGG - chr4_2:55064877-55064896 Msa0608060:CDS 40.0%
TATTACCCGTGCACATCTAA+TGG - chr4_2:55064909-55064928 Msa0608060:CDS 40.0%
TATTCCTGGCTGTGATTCTA+AGG - chr4_2:55064996-55065015 Msa0608060:CDS 40.0%
GATGCAGTGAAAATAGGAGA+TGG - chr4_2:55065093-55065112 Msa0608060:CDS 40.0%
TATATGGCTCTTTGCATCCT+GGG + chr4_2:55065125-55065144 None:intergenic 40.0%
TTATATGGCTCTTTGCATCC+TGG + chr4_2:55065126-55065145 None:intergenic 40.0%
GAACACAGAACTTGATGAAG+TGG - chr4_2:55065146-55065165 Msa0608060:CDS 40.0%
GATGAAGTGGCTGTGAATAA+TGG - chr4_2:55065159-55065178 Msa0608060:CDS 40.0%
! AAGTGGCTGTGAATAATGGA+GGG - chr4_2:55065163-55065182 Msa0608060:CDS 40.0%
GAGACTTTGATCACAATCGA+TGG - chr4_2:55065283-55065302 Msa0608060:intron 40.0%
ACAAAGGGGACATATGGTTA+TGG - chr4_2:55065315-55065334 Msa0608060:intron 40.0%
AATGCAATATGGCCAAAGGA+AGG - chr4_2:55065339-55065358 Msa0608060:intron 40.0%
ATGCAATATGGCCAAAGGAA+GGG - chr4_2:55065340-55065359 Msa0608060:intron 40.0%
! AGGGCTGATTGAGATGATTT+TGG - chr4_2:55065735-55065754 Msa0608060:CDS 40.0%
ACAACACAAGAGCAACCAAA+CGG + chr4_2:55065978-55065997 None:intergenic 40.0%
GACTTTCCTGTAGGATTGTT+AGG + chr4_2:55066177-55066196 None:intergenic 40.0%
AGCAGCTAAAATCGACAAGA+TGG + chr4_2:55066274-55066293 None:intergenic 40.0%
TAGCAAGAAAGCTTCTCAAC+TGG + chr4_2:55066303-55066322 None:intergenic 40.0%
!! TGCTATGTTTCTGATGATGG+AGG - chr4_2:55066318-55066337 Msa0608060:CDS 40.0%
!! CTGCTAGCTTTGCTAATAAC+TGG - chr4_2:55066373-55066392 Msa0608060:CDS 40.0%
ATATCATGTTTGCGGCAGAA+TGG + chr4_2:55066402-55066421 None:intergenic 40.0%
TAGGCTCGATATCATGTTTG+CGG + chr4_2:55066410-55066429 None:intergenic 40.0%
AGTGAAACCTGATTTCGTGA+AGG - chr4_2:55066479-55066498 Msa0608060:intron 40.0%
ATTTCGTGAAGGATCGTAGA+AGG - chr4_2:55066490-55066509 Msa0608060:intron 40.0%
GAGTTCAAGGTCAGAATCAA+TGG - chr4_2:55066531-55066550 Msa0608060:intron 40.0%
TGAACCTGTTGAGCCTATAA+AGG - chr4_2:55066644-55066663 Msa0608060:intron 40.0%
TGAACCTTTATAGGCTCAAC+AGG + chr4_2:55066651-55066670 None:intergenic 40.0%
GGTTCAAAAAGCAACATGGA+TGG - chr4_2:55066665-55066684 Msa0608060:intron 40.0%
GCCGCATTTAACAGATTCAA+TGG + chr4_2:55066989-55067008 None:intergenic 40.0%
CATAAACAAGAAGGGGAAGA+CGG + chr4_2:55067245-55067264 None:intergenic 40.0%
CGATCACAACAAAAAAGCTG+GGG - chr4_2:55067290-55067309 Msa0608060:CDS 40.0%
! GGAAGGTATGTGCTTTATGA+TGG - chr4_2:55067413-55067432 Msa0608060:CDS 40.0%
!! ATGTGCTTTATGATGGATCG+TGG - chr4_2:55067420-55067439 Msa0608060:CDS 40.0%
CAATTCCCTCAAAGGTTTGA+GGG - chr4_2:55067465-55067484 Msa0608060:CDS 40.0%
CAATACCCTCAAACCTTTGA+GGG + chr4_2:55067473-55067492 None:intergenic 40.0%
TCAATACCCTCAAACCTTTG+AGG + chr4_2:55067474-55067493 None:intergenic 40.0%
AAACCTTCTAAACAGACAGC+CGG + chr4_2:55067589-55067608 None:intergenic 40.0%
AACAACTACAGAAAGATGCG+CGG + chr4_2:55067650-55067669 None:intergenic 40.0%
CCACTGGAATTGAGTCAATA+AGG + chr4_2:55067803-55067822 None:intergenic 40.0%
!! CCTTATTGACTCAATTCCAG+TGG - chr4_2:55067800-55067819 Msa0608060:CDS 40.0%
GATCATCCTGCTGTGAAAAA+TGG - chr4_2:55067849-55067868 Msa0608060:five_prime_UTR 40.0%
CCAACATGAAATCACACTGA+TGG + chr4_2:55067937-55067956 None:intergenic 40.0%
CCATCAGTGTGATTTCATGT+TGG - chr4_2:55067934-55067953 Msa0608060:intron 40.0%
GATCTATGGATCAGTTACTG+AGG - chr4_2:55067995-55068014 Msa0608060:intron 40.0%
CAACCTATCAGTGAGATTGA+TGG + chr4_2:55068108-55068127 None:intergenic 40.0%
GTTGCATCAGGTTCTTAGAT+GGG - chr4_2:55068124-55068143 Msa0608060:intron 40.0%
!!! CACTTTTTTGGCTTACCTCT+TGG - chr4_2:55068340-55068359 Msa0608060:intron 40.0%
GTGCTTGAAATTAAGTGGTC+AGG - chr4_2:55068392-55068411 Msa0608060:intron 40.0%
!!! AGCAGTTTTGGTTGATTGGA+GGG - chr4_2:55068444-55068463 Msa0608060:intron 40.0%
ACCTTGACTTCAAAATCTGG+CGG - chr4_2:55068536-55068555 Msa0608060:intron 40.0%
ACCGCCAATTGTAATCATGA+TGG - chr4_2:55068619-55068638 Msa0608060:intron 40.0%
CTGTGGTATGGTACTGTATA+TGG + chr4_2:55068681-55068700 None:intergenic 40.0%
TATACAGTACCATACCACAG+TGG - chr4_2:55068681-55068700 Msa0608060:intron 40.0%
AGAAAACACCGCCTAGTAAA+CGG + chr4_2:55068709-55068728 None:intergenic 40.0%
! CGGTGTTTTCTTCAGCTTTT+GGG - chr4_2:55068718-55068737 Msa0608060:intron 40.0%
!! TTTCTTCAGCTTTTGGGTCT+TGG - chr4_2:55068724-55068743 Msa0608060:intron 40.0%
! CCCATCAAACCTTTTGCAAA+AGG + chr4_2:55068761-55068780 None:intergenic 40.0%
AAAGGTTTGATGGGAAGAAG+AGG - chr4_2:55068767-55068786 Msa0608060:intron 40.0%
AAGGTTTGATGGGAAGAAGA+GGG - chr4_2:55068768-55068787 Msa0608060:intron 40.0%
!!! CACCCACCATTGTTTTTGTA+TGG - chr4_2:55068795-55068814 Msa0608060:intron 40.0%
CGACCATACAAAAACAATGG+TGG + chr4_2:55068801-55068820 None:intergenic 40.0%
ACCCGACCATACAAAAACAA+TGG + chr4_2:55068804-55068823 None:intergenic 40.0%
CAATCATCATATCACTCCTC+TGG - chr4_2:55068831-55068850 Msa0608060:intron 40.0%
TGAGCTATCATCATGGGAAT+TGG + chr4_2:55068904-55068923 None:intergenic 40.0%
CACTGAGTTGTTGAGTCAAA+AGG + chr4_2:55068981-55069000 None:intergenic 40.0%
TCTTTCAGCGTGTCTTGCAA+AGG - chr4_2:55063363-55063382 Msa0608060:three_prime_UTR 45.0%
TGTCTTGCAAAGGTGACAGT+TGG - chr4_2:55063373-55063392 Msa0608060:three_prime_UTR 45.0%
GTAAGTGTTTGTTCCTGAGG+TGG - chr4_2:55064497-55064516 Msa0608060:CDS 45.0%
AAGTGTTTGTTCCTGAGGTG+GGG - chr4_2:55064499-55064518 Msa0608060:CDS 45.0%
TTAACTTTATGCCCCACCTC+AGG + chr4_2:55064513-55064532 None:intergenic 45.0%
TGATTTCGGCTTCATATCCG+AGG + chr4_2:55064608-55064627 None:intergenic 45.0%
TTTGGCCGAAGAACTTCATC+CGG - chr4_2:55064709-55064728 Msa0608060:CDS 45.0%
ATCGACCGGATGAAGTTCTT+CGG + chr4_2:55064717-55064736 None:intergenic 45.0%
! GGAGTAACTGATGTATCGAC+CGG + chr4_2:55064731-55064750 None:intergenic 45.0%
CTCGCTATCAAGATCATCTC+TGG + chr4_2:55064752-55064771 None:intergenic 45.0%
!! GATGATCTTGATAGCGAGCT+AGG - chr4_2:55064754-55064773 Msa0608060:CDS 45.0%
!! ATAGGTTGGTTATCCGGAGT+GGG + chr4_2:55064817-55064836 None:intergenic 45.0%
! TGCGAGATTGAGGTATCCAT+AGG + chr4_2:55064835-55064854 None:intergenic 45.0%
CTCAACTTTCTGCGAGATTG+AGG + chr4_2:55064845-55064864 None:intergenic 45.0%
CTCAATCTCGCAGAAAGTTG+AGG - chr4_2:55064843-55064862 Msa0608060:CDS 45.0%
GTAAATCATCCACAGATGGC+TGG - chr4_2:55064952-55064971 Msa0608060:CDS 45.0%
ATCACCTTAGAATCACAGCC+AGG + chr4_2:55065003-55065022 None:intergenic 45.0%
AAGGTGATGAGTGATGAACG+TGG - chr4_2:55065015-55065034 Msa0608060:CDS 45.0%
GAAGTGGCTGTGAATAATGG+AGG - chr4_2:55065162-55065181 Msa0608060:CDS 45.0%
TTCCACTTCCTCCACCAAAT+GGG - chr4_2:55065190-55065209 Msa0608060:CDS 45.0%
! ATTTTAGACCCCCCATTTGG+TGG + chr4_2:55065204-55065223 None:intergenic 45.0%
ACCAAATGGGGGGTCTAAAA+TGG - chr4_2:55065203-55065222 Msa0608060:CDS 45.0%
! TCCATTTTAGACCCCCCATT+TGG + chr4_2:55065207-55065226 None:intergenic 45.0%
TGGCAATGCAATATGGCCAA+AGG - chr4_2:55065335-55065354 Msa0608060:intron 45.0%
TGCAATATGGCCAAAGGAAG+GGG - chr4_2:55065341-55065360 Msa0608060:intron 45.0%
TTTCCGAAATCCCCTTCCTT+TGG + chr4_2:55065354-55065373 None:intergenic 45.0%
AAGGAAGGGGATTTCGGAAA+TGG - chr4_2:55065354-55065373 Msa0608060:intron 45.0%
! AAGAGGCTTCGTACCGATAT+GGG + chr4_2:55065473-55065492 None:intergenic 45.0%
! AAAGAGGCTTCGTACCGATA+TGG + chr4_2:55065474-55065493 None:intergenic 45.0%
ATACGGATGCAGTCTGGTTA+TGG - chr4_2:55066025-55066044 Msa0608060:CDS 45.0%
TACGGATGCAGTCTGGTTAT+GGG - chr4_2:55066026-55066045 Msa0608060:CDS 45.0%
CGATTTACTGGGCATAGCTT+GGG + chr4_2:55066108-55066127 None:intergenic 45.0%
ACGATTTACTGGGCATAGCT+TGG + chr4_2:55066109-55066128 None:intergenic 45.0%
CCTGTAGGATTGTTAGGACT+TGG + chr4_2:55066171-55066190 None:intergenic 45.0%
CCAAGTCCTAACAATCCTAC+AGG - chr4_2:55066168-55066187 Msa0608060:CDS 45.0%
GGAAGATCAGACTTTCCTGT+AGG + chr4_2:55066186-55066205 None:intergenic 45.0%
ACAGGAAAGTCTGATCTTCC+AGG - chr4_2:55066186-55066205 Msa0608060:CDS 45.0%
ACAAGTGGTGGTTCTTTCTC+AGG + chr4_2:55066240-55066259 None:intergenic 45.0%
!! ATGGTGTTTGCTGTGACAAG+TGG + chr4_2:55066255-55066274 None:intergenic 45.0%
ATTAGCAAAGCTAGCAGCCT+CGG + chr4_2:55066370-55066389 None:intergenic 45.0%
GCAAACATGATATCGAGCCT+AGG - chr4_2:55066409-55066428 Msa0608060:CDS 45.0%
CTACGATCCTTCACGAAATC+AGG + chr4_2:55066489-55066508 None:intergenic 45.0%
GCGTGAGTATGATGAGTTCA+AGG - chr4_2:55066518-55066537 Msa0608060:intron 45.0%
! AGATGCTTTTCACGCAAGAG+AGG - chr4_2:55066581-55066600 Msa0608060:intron 45.0%
TCACGCAAGAGAGGAAATCA+AGG - chr4_2:55066590-55066609 Msa0608060:intron 45.0%
AAAGCAACATGGATGGCTGA+TGG - chr4_2:55066672-55066691 Msa0608060:intron 45.0%
TGACCATGCTGGCATAATTC+AGG - chr4_2:55066746-55066765 Msa0608060:intron 45.0%
GTACCTGAATTATGCCAGCA+TGG + chr4_2:55066752-55066771 None:intergenic 45.0%
ATAAGAGGTTCGTCACTTGG+AGG + chr4_2:55067174-55067193 None:intergenic 45.0%
CCAATAAGAGGTTCGTCACT+TGG + chr4_2:55067177-55067196 None:intergenic 45.0%
CCAAGTGACGAACCTCTTAT+TGG - chr4_2:55067174-55067193 Msa0608060:CDS 45.0%
GGGAAGACGGATATCAACAT+CGG + chr4_2:55067232-55067251 None:intergenic 45.0%
! GTTTCTAGAGAGAAACGTCC+AGG - chr4_2:55067264-55067283 Msa0608060:CDS 45.0%
! GGCTCTAACCAATGCATTCA+TGG + chr4_2:55067316-55067335 None:intergenic 45.0%
!! GAATGCATTGGTTAGAGCCT+CGG - chr4_2:55067317-55067336 Msa0608060:CDS 45.0%
AACTCCAAAGCAATGAGGGA+AGG - chr4_2:55067396-55067415 Msa0608060:CDS 45.0%
CATACCTTCCCTCATTGCTT+TGG + chr4_2:55067403-55067422 None:intergenic 45.0%
!! TGCTTTATGATGGATCGTGG+TGG - chr4_2:55067423-55067442 Msa0608060:CDS 45.0%
GCTATGTCCAATTCCCTCAA+AGG - chr4_2:55067457-55067476 Msa0608060:CDS 45.0%
! CCTCAAACCTTTGAGGGAAT+TGG + chr4_2:55067467-55067486 None:intergenic 45.0%
CCAATTCCCTCAAAGGTTTG+AGG - chr4_2:55067464-55067483 Msa0608060:CDS 45.0%
GTTAACATGAGAGCCCTTGA+TGG - chr4_2:55067537-55067556 Msa0608060:CDS 45.0%
CAACACCTCAGAAGAGAACA+GGG - chr4_2:55067698-55067717 Msa0608060:CDS 45.0%
GTATGAGGACAAGACTGAGT+GGG - chr4_2:55067956-55067975 Msa0608060:intron 45.0%
TATGAGGACAAGACTGAGTG+GGG - chr4_2:55067957-55067976 Msa0608060:intron 45.0%
TGGATCAGTTACTGAGGATG+TGG - chr4_2:55068001-55068020 Msa0608060:intron 45.0%
! AGGATGTGGTCACTGGTTAT+AGG - chr4_2:55068015-55068034 Msa0608060:intron 45.0%
CTCCCATCAATCTCACTGAT+AGG - chr4_2:55068102-55068121 Msa0608060:intron 45.0%
TCTCACTGATAGGTTGCATC+AGG - chr4_2:55068112-55068131 Msa0608060:intron 45.0%
GGTTGCATCAGGTTCTTAGA+TGG - chr4_2:55068123-55068142 Msa0608060:intron 45.0%
GTGTCACAGTAATAGCCAAG+AGG + chr4_2:55068358-55068377 None:intergenic 45.0%
TAAGTGGTCAGGAATTGAGC+TGG - chr4_2:55068403-55068422 Msa0608060:intron 45.0%
CAGGAATTGAGCTGGAAGAA+TGG - chr4_2:55068411-55068430 Msa0608060:intron 45.0%
GAATTGAGCTGGAAGAATGG+TGG - chr4_2:55068414-55068433 Msa0608060:intron 45.0%
! GGTGGAGAAATGAGCAGTTT+TGG - chr4_2:55068432-55068451 Msa0608060:intron 45.0%
!!! GAGCAGTTTTGGTTGATTGG+AGG - chr4_2:55068443-55068462 Msa0608060:intron 45.0%
GGTTTACTCAAAGTCGTTGC+AGG - chr4_2:55068497-55068516 Msa0608060:intron 45.0%
!!! ACCGCCAGATTTTGAAGTCA+AGG + chr4_2:55068540-55068559 None:intergenic 45.0%
! GCGGTGTTTTCTTCAGCTTT+TGG - chr4_2:55068717-55068736 Msa0608060:intron 45.0%
ATTGGAATGAACCGCCTATC+TGG + chr4_2:55068886-55068905 None:intergenic 45.0%
!! AGAAGTGGTCTGGTTTGGTC+AGG + chr4_2:55063414-55063433 None:intergenic 50.0%
GTTACGGTTGGATGTAAGGG+AGG + chr4_2:55064688-55064707 None:intergenic 50.0%
CTTCGGCCAAATGTTACGGT+TGG + chr4_2:55064700-55064719 None:intergenic 50.0%
!! CATAGGTTGGTTATCCGGAG+TGG + chr4_2:55064818-55064837 None:intergenic 50.0%
CACTCCGGATAACCAACCTA+TGG - chr4_2:55064816-55064835 Msa0608060:CDS 50.0%
CACAGATGGCTGGTGCAAAA+GGG - chr4_2:55064962-55064981 Msa0608060:CDS 50.0%
! GGGTCGAAATGTGCTATTCC+TGG - chr4_2:55064982-55065001 Msa0608060:CDS 50.0%
TTTGGTGGAGGAAGTGGAAG+TGG + chr4_2:55065189-55065208 None:intergenic 50.0%
CTTCCACTTCCTCCACCAAA+TGG - chr4_2:55065189-55065208 Msa0608060:CDS 50.0%
TCCACTTCCTCCACCAAATG+GGG - chr4_2:55065191-55065210 Msa0608060:CDS 50.0%
! ATGGGGGGTCTAAAATGGAG+AGG - chr4_2:55065208-55065227 Msa0608060:CDS 50.0%
! GCGCTGATGAGAAGTCAAAC+TGG - chr4_2:55065261-55065280 Msa0608060:CDS 50.0%
TGGCCAAAGGAAGGGGATTT+CGG - chr4_2:55065348-55065367 Msa0608060:intron 50.0%
! GGTCGGCTCATCAATTCAGT+TGG + chr4_2:55065402-55065421 None:intergenic 50.0%
CTGAATTGATGAGCCGACCA+TGG - chr4_2:55065403-55065422 Msa0608060:intron 50.0%
AATTGATGAGCCGACCATGG+AGG - chr4_2:55065406-55065425 Msa0608060:intron 50.0%
TTGTTAGTGGCCTCCATGGT+CGG + chr4_2:55065419-55065438 None:intergenic 50.0%
TTCCTTGTTAGTGGCCTCCA+TGG + chr4_2:55065423-55065442 None:intergenic 50.0%
CTGCTGTTCTCAGCCCATAT+CGG - chr4_2:55065457-55065476 Msa0608060:intron 50.0%
! CTCTTGTGTTGTTCCTGCAC+TGG - chr4_2:55065986-55066005 Msa0608060:CDS 50.0%
! TTGTGTTGTTCCTGCACTGG+AGG - chr4_2:55065989-55066008 Msa0608060:CDS 50.0%
! TGTGTTGTTCCTGCACTGGA+GGG - chr4_2:55065990-55066009 Msa0608060:CDS 50.0%
ACGGATGCAGTCTGGTTATG+GGG - chr4_2:55066027-55066046 Msa0608060:CDS 50.0%
!! GTGTTTGCTGTGACAAGTGG+TGG + chr4_2:55066252-55066271 None:intergenic 50.0%
!!! AACTTTTGAGGCAATGGCCG+AGG - chr4_2:55066350-55066369 Msa0608060:CDS 50.0%
!! GAAAAGCATCTGACCTGCGA+CGG + chr4_2:55066572-55066591 None:intergenic 50.0%
! GGATGGCTGATGGATCTCAT+TGG - chr4_2:55066682-55066701 Msa0608060:intron 50.0%
! CTGATGGATCTCATTGGCCA+GGG - chr4_2:55066688-55066707 Msa0608060:intron 50.0%
! GAAGTGTTCAACCAAGTCCC+TGG + chr4_2:55066708-55066727 None:intergenic 50.0%
ACACTTCACCTGAGCACTCA+AGG - chr4_2:55066721-55066740 Msa0608060:intron 50.0%
CACTTCACCTGAGCACTCAA+GGG - chr4_2:55066722-55066741 Msa0608060:intron 50.0%
ACTTCACCTGAGCACTCAAG+GGG - chr4_2:55066723-55066742 Msa0608060:intron 50.0%
GCGGCTTATGCAATCCATTG+CGG - chr4_2:55067004-55067023 Msa0608060:CDS 50.0%
GACGGATATCAACATCGGTC+AGG + chr4_2:55067227-55067246 None:intergenic 50.0%
GAGGGAATTGGACATAGCAG+AGG + chr4_2:55067455-55067474 None:intergenic 50.0%
!! AGAGCCCTTGATGGACTTCA+AGG - chr4_2:55067546-55067565 Msa0608060:CDS 50.0%
TGGGCCTTGAAGTCCATCAA+GGG + chr4_2:55067553-55067572 None:intergenic 50.0%
CTTCAAGGCCCAGTCTATGT+AGG - chr4_2:55067561-55067580 Msa0608060:CDS 50.0%
! AGCCGGTTCCTACATAGACT+GGG + chr4_2:55067572-55067591 None:intergenic 50.0%
GAACCGGCTGTCTGTTTAGA+AGG - chr4_2:55067583-55067602 Msa0608060:CDS 50.0%
GAAAGATGCGCGGTCTTCTT+TGG + chr4_2:55067640-55067659 None:intergenic 50.0%
!! CCTGTTCTCTTCTGAGGTGT+TGG + chr4_2:55067700-55067719 None:intergenic 50.0%
CCAACACCTCAGAAGAGAAC+AGG - chr4_2:55067697-55067716 Msa0608060:CDS 50.0%
TAGTGCCCTGTTCTCTTCTG+AGG + chr4_2:55067706-55067725 None:intergenic 50.0%
! CAGAAGAGAACAGGGCACTA+AGG - chr4_2:55067706-55067725 Msa0608060:CDS 50.0%
! AGAGAACAGGGCACTAAGGA+TGG - chr4_2:55067710-55067729 Msa0608060:CDS 50.0%
! GAGAACAGGGCACTAAGGAT+GGG - chr4_2:55067711-55067730 Msa0608060:CDS 50.0%
ATTCCAGTGGCACAGTTCCA+AGG - chr4_2:55067813-55067832 Msa0608060:CDS 50.0%
ACAGCAGGATGATCAGCAAG+TGG + chr4_2:55067843-55067862 None:intergenic 50.0%
!! GGTCGTCCATTTTTCACAGC+AGG + chr4_2:55067858-55067877 None:intergenic 50.0%
GTGAAAAATGGACGACCTCC+TGG - chr4_2:55067861-55067880 Msa0608060:intron 50.0%
GCTGCTTGATGCATCAACTG+TGG - chr4_2:55067905-55067924 Msa0608060:intron 50.0%
GGTATGAGGACAAGACTGAG+TGG - chr4_2:55067955-55067974 Msa0608060:intron 50.0%
CAGCGTGTTGGATGGATCTA+TGG - chr4_2:55067981-55068000 Msa0608060:intron 50.0%
GTTACTGAGGATGTGGTCAC+TGG - chr4_2:55068008-55068027 Msa0608060:intron 50.0%
!! CAGGTTCTTAGATGGGCTAC+TGG - chr4_2:55068131-55068150 Msa0608060:intron 50.0%
TAAACGGCTCCACTGTGGTA+TGG + chr4_2:55068693-55068712 None:intergenic 50.0%
GTTTGATGGGAAGAAGAGGG+AGG - chr4_2:55068771-55068790 Msa0608060:intron 50.0%
CATCATATCACTCCTCTGGG+TGG - chr4_2:55068835-55068854 Msa0608060:intron 50.0%
AGTGCACTTACCACCCACTC+CGG - chr4_2:55064801-55064820 Msa0608060:CDS 55.0%
! CCTTTTGCACCAGCCATCTG+TGG + chr4_2:55064964-55064983 None:intergenic 55.0%
CCACAGATGGCTGGTGCAAA+AGG - chr4_2:55064961-55064980 Msa0608060:CDS 55.0%
ATAGGAGATGGGATGTGCCC+AGG - chr4_2:55065105-55065124 Msa0608060:CDS 55.0%
CCACTTCCTCCACCAAATGG+GGG - chr4_2:55065192-55065211 Msa0608060:CDS 55.0%
CACTTCCTCCACCAAATGGG+GGG - chr4_2:55065193-55065212 Msa0608060:CDS 55.0%
! TTAGACCCCCCATTTGGTGG+AGG + chr4_2:55065201-55065220 None:intergenic 55.0%
GACCATGGAGGCCACTAACA+AGG - chr4_2:55065418-55065437 Msa0608060:intron 55.0%
! TATGGGCTGAGAACAGCAGC+AGG + chr4_2:55065456-55065475 None:intergenic 55.0%
TATGTGTGACCCTCCAGTGC+AGG + chr4_2:55066002-55066021 None:intergenic 55.0%
TGACCTGCGACGGATAGAGT+CGG + chr4_2:55066562-55066581 None:intergenic 55.0%
! GCTGATGGATCTCATTGGCC+AGG - chr4_2:55066687-55066706 Msa0608060:intron 55.0%
GATCTCATTGGCCAGGGACT+TGG - chr4_2:55066694-55066713 Msa0608060:intron 55.0%
CTTTGCAACTGCGACCGCAA+TGG + chr4_2:55067021-55067040 None:intergenic 55.0%
AGCTGGGGCCATGAATGCAT+TGG - chr4_2:55067305-55067324 Msa0608060:CDS 55.0%
CTGGGCCTTGAAGTCCATCA+AGG + chr4_2:55067554-55067573 None:intergenic 55.0%
GGCCCAGTCTATGTAGGAAC+CGG - chr4_2:55067567-55067586 Msa0608060:CDS 55.0%
! CAGCCGGTTCCTACATAGAC+TGG + chr4_2:55067573-55067592 None:intergenic 55.0%
CTACCTTGGAACTGTGCCAC+TGG + chr4_2:55067819-55067838 None:intergenic 55.0%
CAGTGGCACAGTTCCAAGGT+AGG - chr4_2:55067817-55067836 Msa0608060:CDS 55.0%
GATCAGCAAGTGGCCTACCT+TGG + chr4_2:55067833-55067852 None:intergenic 55.0%
!! GGTATAGTGAGAGCACCAGG+AGG + chr4_2:55067879-55067898 None:intergenic 55.0%
!! CGAGGTATAGTGAGAGCACC+AGG + chr4_2:55067882-55067901 None:intergenic 55.0%
GATGCATCAAGCAGCTCACG+AGG + chr4_2:55067900-55067919 None:intergenic 55.0%
GATTGATGGGAGCAGTTCCG+CGG + chr4_2:55068094-55068113 None:intergenic 55.0%
CATCTAGCTGCCGTGCTTCA+AGG - chr4_2:55068476-55068495 Msa0608060:intron 55.0%
CCTAGTAAACGGCTCCACTG+TGG + chr4_2:55068698-55068717 None:intergenic 55.0%
CCACAGTGGAGCCGTTTACT+AGG - chr4_2:55068695-55068714 Msa0608060:intron 55.0%
CAGTGGAGCCGTTTACTAGG+CGG - chr4_2:55068698-55068717 Msa0608060:intron 55.0%
! GTGGATTGATAGCCACCCAG+AGG + chr4_2:55068850-55068869 None:intergenic 55.0%
GTGGCTATCAATCCACCAGC+CGG - chr4_2:55068854-55068873 Msa0608060:intron 55.0%
ACCGCCTATCTGGTCTGTAC+CGG + chr4_2:55068876-55068895 None:intergenic 55.0%
! GGTTGGTTATCCGGAGTGGG+TGG + chr4_2:55064814-55064833 None:intergenic 60.0%
! CCCCCATTTGGTGGAGGAAG+TGG + chr4_2:55065195-55065214 None:intergenic 60.0%
GACCTGCGACGGATAGAGTC+GGG + chr4_2:55066561-55066580 None:intergenic 60.0%
TGGTCACCCCTTGAGTGCTC+AGG + chr4_2:55066732-55066751 None:intergenic 60.0%
CACTCAAGGGGTGACCATGC+TGG - chr4_2:55066735-55066754 Msa0608060:intron 60.0%
GCCTCGGCTGTCATGTCCAA+CGG - chr4_2:55067333-55067352 Msa0608060:CDS 60.0%
ACCGTTGGACATGACAGCCG+AGG + chr4_2:55067337-55067356 None:intergenic 60.0%
ACTGAGTGGGGACAGCGTGT+TGG - chr4_2:55067969-55067988 Msa0608060:intron 60.0%
AGTGGGGACAGCGTGTTGGA+TGG - chr4_2:55067973-55067992 Msa0608060:intron 60.0%
ACTAAACGCGACGCCTTCCG+CGG - chr4_2:55068074-55068093 Msa0608060:intron 60.0%
AGAAGAGGGACAGTGCAGGC+AGG + chr4_2:55068289-55068308 None:intergenic 60.0%
CCAGAGAAGAGGGACAGTGC+AGG + chr4_2:55068293-55068312 None:intergenic 60.0%
!! ATCTGGTCTGTACCGGCTGG+TGG + chr4_2:55068869-55068888 None:intergenic 60.0%
! CCTATCTGGTCTGTACCGGC+TGG + chr4_2:55068872-55068891 None:intergenic 60.0%
CCAGCCGGTACAGACCAGAT+AGG - chr4_2:55068869-55068888 Msa0608060:intron 60.0%
GCCGGTACAGACCAGATAGG+CGG - chr4_2:55068872-55068891 Msa0608060:five_prime_UTR 60.0%
TGCCCGACTCTATCCGTCGC+AGG - chr4_2:55066556-55066575 Msa0608060:intron 65.0%
CGGTCTTCTTTGGCGCGTGG+AGG + chr4_2:55067630-55067649 None:intergenic 65.0%
GATGGGAGCAGTTCCGCGGA+AGG + chr4_2:55068090-55068109 None:intergenic 65.0%
GCGCGGTCTTCTTTGGCGCG+TGG + chr4_2:55067633-55067652 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 55063313 55069144 55063313 ID=Msa0608060;Name=Msa0608060
chr4_2 mRNA 55063313 55069144 55063313 ID=Msa0608060-mRNA-1;Parent=Msa0608060;Name=Msa0608060-mRNA-1;_AED=0.17;_eAED=0.17;_QI=307|1|1|1|0.66|0.5|4|231|1142
chr4_2 exon 55063313 55065298 55063313 ID=Msa0608060-mRNA-1:exon:13952;Parent=Msa0608060-mRNA-1
chr4_2 exon 55065690 55066497 55065690 ID=Msa0608060-mRNA-1:exon:13951;Parent=Msa0608060-mRNA-1
chr4_2 exon 55066979 55067878 55066979 ID=Msa0608060-mRNA-1:exon:13950;Parent=Msa0608060-mRNA-1
chr4_2 exon 55068872 55069144 55068872 ID=Msa0608060-mRNA-1:exon:13949;Parent=Msa0608060-mRNA-1
chr4_2 five_prime_UTR 55068872 55069144 55068872 ID=Msa0608060-mRNA-1:five_prime_utr;Parent=Msa0608060-mRNA-1
chr4_2 five_prime_UTR 55067845 55067878 55067845 ID=Msa0608060-mRNA-1:five_prime_utr;Parent=Msa0608060-mRNA-1
chr4_2 CDS 55066979 55067844 55066979 ID=Msa0608060-mRNA-1:cds;Parent=Msa0608060-mRNA-1
chr4_2 CDS 55065690 55066497 55065690 ID=Msa0608060-mRNA-1:cds;Parent=Msa0608060-mRNA-1
chr4_2 CDS 55063544 55065298 55063544 ID=Msa0608060-mRNA-1:cds;Parent=Msa0608060-mRNA-1
chr4_2 three_prime_UTR 55063313 55063543 55063313 ID=Msa0608060-mRNA-1:three_prime_utr;Parent=Msa0608060-mRNA-1
Gene Sequence

>Msa0608060

ATGAAGCCGAAATCATTACAAATGAGCAGATCATCTTTGTCAACATCTTCTGATGTATCTGAAGCACAGAAGCCTCCCTTACATCCAACCGTAACATTTGGCCGAAGAACTTCATCCGGTCGATACATCAGTTACTCCAGAGATGATCTTGATAGCGAGCTAGGAAGTAATGACTTCATGAACTATACAGTGCACTTACCACCCACTCCGGATAACCAACCTATGGATACCTCAATCTCGCAGAAAGTTGAGGAGCAGTATGTTTCAAGTTCTCTATTCACTGGAGGATTTAACAGTATTACCCGTGCACATCTAATGGATAAAGTTACAGAATCTGAAGTAAATCATCCACAGATGGCTGGTGCAAAAGGGTCGAAATGTGCTATTCCTGGCTGTGATTCTAAGGTGATGAGTGATGAACGTGGTGACGACATTCTTCCCTGTGAGTGTGATTATAAGATATGTAGAGATTGCTATATAGATGCAGTGAAAATAGGAGATGGGATGTGCCCAGGATGCAAAGAGCCATATAAGAACACAGAACTTGATGAAGTGGCTGTGAATAATGGAGGGCCACTTCCACTTCCTCCACCAAATGGGGGGTCTAAAATGGAGAGGAGATTGTCCTTGATGAAATCGACAAAGTCTGCGCTGATGAGAAGTCAAACTGGAGACTTTGATCACAATCGATGGTTGTTTGAAACAAAGGGGACATATGGTTATGGCAATGCAATATGGCCAAAGGAAGGGGATTTCGGAAATGGAAAAGATGGTGATGTTTCTGAGCCAACTGAATTGATGAGCCGACCATGGAGGCCACTAACAAGGAAGTTGAAGATACCTGCTGCTGTTCTCAGCCCATATCGTCTCATCATTTTTATCCGTTTGGTTGCTCTTGTGTTGTTCCTGCACTGGAGGGTCACACATAAAAATACGGATGCAGTCTGGTTATGGGGCATGTCTATAGTTTGTGAATTATGGTTTGCTTTCTCTTGGCTTCTTGATCAACTGCCCAAGCTATGCCCAGTAAATCGTTCTACAGATCTTAATGTTCTGAAGGAAAAATTTGAATCACCAAGTCCTAACAATCCTACAGGAAAGTCTGATCTTCCAGGCATAGATATCTTTGTTTCAACTGCTGATCCTGAGAAAGAACCACCACTTGTCACAGCAAACACCATCTTGTCGATTTTAGCTGCTGACTATCCAGTTGAGAAGCTTTCTTGCTATGTTTCTGATGATGGAGGTGCACTTTTAACTTTTGAGGCAATGGCCGAGGCTGCTAGCTTTGCTAATAACTGGGTTCCATTCTGCCGCAAACATGATATCGAGCCTAGGAATCCTGAATCATACTTCAGCTTAAAGAGAGATCCTTACAAAAACAAAGTGAAACCTGATTTCGTGAAGGATCGTAGAAGGTTGAAGCGTGAGTATGATGAGTTCAAGGTCAGAATCAATGGTTTGCCCGACTCTATCCGTCGCAGGTCAGATGCTTTTCACGCAAGAGAGGAAATCAAGGCCATGAAACATCAGAGACAAAATAGGGGTGATGAACCTGTTGAGCCTATAAAGGTTCAAAAAGCAACATGGATGGCTGATGGATCTCATTGGCCAGGGACTTGGTTGAACACTTCACCTGAGCACTCAAGGGGTGACCATGCTGGCATAATTCAGGTGATGTTGAAGCCTCCAAGTGACGAACCTCTTATTGGAAATGCTGATGATGCAAAGCTTATTGACCTGACCGATGTTGATATCCGTCTTCCCCTTCTTGTTTATGTTTCTAGAGAGAAACGTCCAGGTTACGATCACAACAAAAAAGCTGGGGCCATGAATGCATTGGTTAGAGCCTCGGCTGTCATGTCCAACGGTCCTTTTATACTTAACCTCGACTGTGATCACTATATATATAACTCCAAAGCAATGAGGGAAGGTATGTGCTTTATGATGGATCGTGGTGGCGATCGCCTCTGCTATGTCCAATTCCCTCAAAGGTTTGAGGGTATTGATCCCTCTGATAGATATGCTAATCACAACACCGTCTTCTTTGATGTTAACATGAGAGCCCTTGATGGACTTCAAGGCCCAGTCTATGTAGGAACCGGCTGTCTGTTTAGAAGGTTTGCTCTTTATGGTTTTGATCCTCCACGCGCCAAAGAAGACCGCGCATCTTTCTGTAGTTGTTGCTTTGGGCGTAATAAGAAGAAGCATGCCAACACCTCAGAAGAGAACAGGGCACTAAGGATGGGTGACGACTCTGATGATGAAGAGATGAATCTTTCACAATTCTCGAAGAAATTTGGGAACTCAAATATCCTTATTGACTCAATTCCAGTGGCACAGTTCCAAGGTAGGCCACTTGCTGATCATCCTGCTGTGAAAAATGGACGACCTCCTGGTGCTCTCACTATACCTCGTGAGCTGCTTGATGCATCAACTGTGGCAGAAGCCATCAGTGTGATTTCATGTTGGTATGAGGACAAGACTGAGTGGGGACAGCGTGTTGGATGGATCTATGGATCAGTTACTGAGGATGTGGTCACTGGTTATAGGATGCATAATAGAGGATGGAAGTCAGTTTACTGCGTAACTAAACGCGACGCCTTCCGCGGAACTGCTCCCATCAATCTCACTGATAGGTTGCATCAGGTTCTTAGATGGGCTACTGGCTCAGTTGAGATATTCTTCTCTAAAAACAATGCAATTATGGCCACCCGAAGAATGAAATTTCTTCAGAGGATAGCATACCTTAATGTTGGAATTTATCCATTCACTTCGTTTTTTCTTATTGTCTATTGCTTCCTGCCTGCACTGTCCCTCTTCTCTGGACAGTTCATTGTCCAAACACTCGATGTCACTTTTTTGGCTTACCTCTTGGCTATTACTGTGACACTGTGCATTCTTGCTGTGCTTGAAATTAAGTGGTCAGGAATTGAGCTGGAAGAATGGTGGAGAAATGAGCAGTTTTGGTTGATTGGAGGGACTAGTGCACATCTAGCTGCCGTGCTTCAAGGTTTACTCAAAGTCGTTGCAGGCATTGAAATCTCATTCACCTTGACTTCAAAATCTGGCGGTGATGATGTTGACGACGAGTATGCTGATCTGTATATTGTCAAATGGTCATCCCTTATGATACCGCCAATTGTAATCATGATGGTGAACTTGATAGGAATAGCTGTCGGAGTTAGCAGAACCATATACAGTACCATACCACAGTGGAGCCGTTTACTAGGCGGTGTTTTCTTCAGCTTTTGGGTCTTGGCTCATCTCTATCCTTTTGCAAAAGGTTTGATGGGAAGAAGAGGGAGGACACCCACCATTGTTTTTGTATGGTCGGGTCTAATAGCAATCATCATATCACTCCTCTGGGTGGCTATCAATCCACCAGCCGGTACAGACCAGATAGGCGGTTCATTCCAATTCCCATGA
Protein sequence

>Msa0608060

MKPKSLQMSRSSLSTSSDVSEAQKPPLHPTVTFGRRTSSGRYISYSRDDLDSELGSNDFMNYTVHLPPTPDNQPMDTSISQKVEEQYVSSSLFTGGFNSITRAHLMDKVTESEVNHPQMAGAKGSKCAIPGCDSKVMSDERGDDILPCECDYKICRDCYIDAVKIGDGMCPGCKEPYKNTELDEVAVNNGGPLPLPPPNGGSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGDFGNGKDGDVSEPTELMSRPWRPLTRKLKIPAAVLSPYRLIIFIRLVALVLFLHWRVTHKNTDAVWLWGMSIVCELWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFESPSPNNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANNWVPFCRKHDIEPRNPESYFSLKRDPYKNKVKPDFVKDRRRLKREYDEFKVRINGLPDSIRRRSDAFHAREEIKAMKHQRQNRGDEPVEPIKVQKATWMADGSHWPGTWLNTSPEHSRGDHAGIIQVMLKPPSDEPLIGNADDAKLIDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRFALYGFDPPRAKEDRASFCSCCFGRNKKKHANTSEENRALRMGDDSDDEEMNLSQFSKKFGNSNILIDSIPVAQFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAIMATRRMKFLQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLDVTFLAYLLAITVTLCILAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGIEISFTLTSKSGGDDVDDEYADLYIVKWSSLMIPPIVIMMVNLIGIAVGVSRTIYSTIPQWSRLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAIIISLLWVAINPPAGTDQIGGSFQFP*