Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0305840 | XP_013465643.1 | 93.541 | 449 | 12 | 3 | 1 | 439 | 1 | 442 | 0.0 | 835 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0305840 | sp|Q5KQN0|CAX2_ORYSJ | 72.209 | 421 | 109 | 4 | 22 | 439 | 21 | 436 | 0.0 | 587 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0305840 | A0A072VCB3 | 93.541 | 449 | 12 | 3 | 1 | 439 | 1 | 442 | 0.0 | 835 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0030700 | Msa0305840 | 0.833017 | 6.787739e-56 | -8.615850e-47 |
Msa0074600 | Msa0305840 | 0.801520 | 8.662507e-49 | -8.615850e-47 |
Msa0078120 | Msa0305840 | 0.818877 | 1.557971e-52 | -8.615850e-47 |
Msa0089730 | Msa0305840 | 0.823774 | 1.155537e-53 | -8.615850e-47 |
Msa0092410 | Msa0305840 | 0.818005 | 2.456662e-52 | -8.615850e-47 |
Msa0101860 | Msa0305840 | 0.816799 | 4.590830e-52 | -8.615850e-47 |
Msa0130850 | Msa0305840 | 0.845939 | 2.968919e-59 | -8.615850e-47 |
Msa0152560 | Msa0305840 | 0.806104 | 9.673977e-50 | -8.615850e-47 |
Msa0176750 | Msa0305840 | 0.819415 | 1.175329e-52 | -8.615850e-47 |
Msa0183760 | Msa0305840 | 0.805196 | 1.500164e-49 | -8.615850e-47 |
Msa0187830 | Msa0305840 | 0.810788 | 9.683975e-51 | -8.615850e-47 |
Msa0189610 | Msa0305840 | 0.804105 | 2.533740e-49 | -8.615850e-47 |
Msa0225110 | Msa0305840 | 0.801439 | 8.999467e-49 | -8.615850e-47 |
Msa0225220 | Msa0305840 | 0.809530 | 1.808214e-50 | -8.615850e-47 |
Msa0232020 | Msa0305840 | 0.816831 | 4.515186e-52 | -8.615850e-47 |
Msa0232090 | Msa0305840 | 0.806013 | 1.010662e-49 | -8.615850e-47 |
Msa0254260 | Msa0305840 | 0.804930 | 1.705028e-49 | -8.615850e-47 |
Msa0260540 | Msa0305840 | 0.803921 | 2.766917e-49 | -8.615850e-47 |
Msa0264830 | Msa0305840 | 0.810938 | 8.986979e-51 | -8.615850e-47 |
Msa0269560 | Msa0305840 | 0.817286 | 3.568748e-52 | -8.615850e-47 |
Msa0271550 | Msa0305840 | 0.815240 | 1.022986e-51 | -8.615850e-47 |
Msa0287870 | Msa0305840 | 0.802877 | 4.553293e-49 | -8.615850e-47 |
Msa0302870 | Msa0305840 | 0.804122 | 2.513640e-49 | -8.615850e-47 |
Msa0305840 | Msa0308460 | 0.802591 | 5.215975e-49 | -8.615850e-47 |
Msa0305840 | Msa0310090 | 0.800605 | 1.332386e-48 | -8.615850e-47 |
Msa0305840 | Msa0319290 | 0.802362 | 5.815372e-49 | -8.615850e-47 |
Msa0305840 | Msa0332390 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
Msa0305840 | Msa0340340 | 0.811891 | 5.579205e-51 | -8.615850e-47 |
Msa0305840 | Msa0342010 | 0.803994 | 2.671851e-49 | -8.615850e-47 |
Msa0305840 | Msa0369230 | 0.800706 | 1.270657e-48 | -8.615850e-47 |
Msa0305840 | Msa0382490 | 0.800018 | 1.754302e-48 | -8.615850e-47 |
Msa0305840 | Msa0386010 | 0.802894 | 4.517256e-49 | -8.615850e-47 |
Msa0305840 | Msa0388360 | 0.803207 | 3.891317e-49 | -8.615850e-47 |
Msa0305840 | Msa0430440 | 0.847055 | 1.472638e-59 | -8.615850e-47 |
Msa0305840 | Msa0432160 | 0.809804 | 1.578492e-50 | -8.615850e-47 |
Msa0305840 | Msa0432670 | 0.804466 | 2.131146e-49 | -8.615850e-47 |
Msa0305840 | Msa0476680 | 0.818110 | 2.325026e-52 | -8.615850e-47 |
Msa0305840 | Msa0506860 | 0.803885 | 2.815106e-49 | -8.615850e-47 |
Msa0305840 | Msa0508880 | 0.816195 | 6.267407e-52 | -8.615850e-47 |
Msa0305840 | Msa0521010 | 0.818696 | 1.712953e-52 | -8.615850e-47 |
Msa0305840 | Msa0553200 | 0.808289 | 3.331781e-50 | -8.615850e-47 |
Msa0305840 | Msa0572750 | 0.802109 | 6.556609e-49 | -8.615850e-47 |
Msa0305840 | Msa0613710 | 0.810100 | 1.363094e-50 | -8.615850e-47 |
Msa0305840 | Msa0614380 | 0.837601 | 4.722215e-57 | -8.615850e-47 |
Msa0305840 | Msa0661630 | 0.806813 | 6.854588e-50 | -8.615850e-47 |
Msa0305840 | Msa0679020 | 0.813078 | 3.070245e-51 | -8.615850e-47 |
Msa0305840 | Msa0697590 | 0.803891 | 2.807226e-49 | -8.615850e-47 |
Msa0305840 | Msa0708310 | 0.812264 | 4.627619e-51 | -8.615850e-47 |
Msa0305840 | Msa0733010 | 0.829506 | 4.955250e-55 | -8.615850e-47 |
Msa0305840 | Msa0743930 | 0.806935 | 6.459591e-50 | -8.615850e-47 |
Msa0305840 | Msa0750810 | 0.827606 | 1.426134e-54 | -8.615850e-47 |
Msa0305840 | Msa0763920 | 0.803788 | 2.949373e-49 | -8.615850e-47 |
Msa0305840 | Msa0786980 | 0.838475 | 2.813770e-57 | -8.615850e-47 |
Msa0305840 | Msa0797770 | 0.832079 | 1.159790e-55 | -8.615850e-47 |
Msa0305840 | Msa0823540 | 0.830386 | 3.023333e-55 | -8.615850e-47 |
Msa0305840 | Msa0828240 | 0.805331 | 1.405770e-49 | -8.615850e-47 |
Msa0305840 | Msa0835230 | 0.832497 | 9.138569e-56 | -8.615850e-47 |
Msa0305840 | Msa0862620 | 0.821101 | 4.829872e-53 | -8.615850e-47 |
Msa0305840 | Msa0879930 | 0.815303 | 9.905435e-52 | -8.615850e-47 |
Msa0305840 | Msa0881350 | 0.807311 | 5.378866e-50 | -8.615850e-47 |
Msa0305840 | Msa0899970 | 0.826577 | 2.513740e-54 | -8.615850e-47 |
Msa0305840 | Msa0936390 | 0.805178 | 1.512969e-49 | -8.615850e-47 |
Msa0305840 | Msa0965080 | 0.813320 | 2.717706e-51 | -8.615850e-47 |
Msa0305840 | Msa0965290 | 0.827839 | 1.253659e-54 | -8.615850e-47 |
Msa0305840 | Msa0992640 | 0.815553 | 8.717217e-52 | -8.615850e-47 |
Msa0305840 | Msa0992680 | 0.811545 | 6.634949e-51 | -8.615850e-47 |
Msa0305840 | Msa0999680 | 0.831669 | 1.463906e-55 | -8.615850e-47 |
Msa0305840 | Msa1084640 | 0.824864 | 6.407204e-54 | -8.615850e-47 |
Msa0305840 | Msa1088410 | 0.810550 | 1.090088e-50 | -8.615850e-47 |
Msa0305840 | Msa1111290 | 0.802688 | 4.981152e-49 | -8.615850e-47 |
Msa0305840 | Msa1111380 | 0.833740 | 4.482115e-56 | -8.615850e-47 |
Msa0305840 | Msa1161810 | 0.812804 | 3.525118e-51 | -8.615850e-47 |
Msa0305840 | Msa1188180 | 0.823826 | 1.123787e-53 | -8.615850e-47 |
Msa0305840 | Msa1212050 | 0.816927 | 4.296349e-52 | -8.615850e-47 |
Msa0305840 | Msa1212130 | 0.809489 | 1.845357e-50 | -8.615850e-47 |
Msa0305840 | Msa1214170 | 0.823602 | 1.268194e-53 | -8.615850e-47 |
Msa0305840 | Msa1226460 | 0.801534 | 8.605290e-49 | -8.615850e-47 |
Msa0305840 | Msa1236440 | 0.809710 | 1.654070e-50 | -8.615850e-47 |
Msa0305840 | Msa1245440 | 0.820655 | 6.116980e-53 | -8.615850e-47 |
Msa0305840 | Msa1252180 | 0.802018 | 6.844225e-49 | -8.615850e-47 |
Msa0305840 | Msa1259860 | 0.807220 | 5.621248e-50 | -8.615850e-47 |
Msa0305840 | Msa1277670 | 0.800363 | 1.492464e-48 | -8.615850e-47 |
Msa0305840 | Msa1283740 | 0.809944 | 1.472856e-50 | -8.615850e-47 |
Msa0305840 | Msa1303070 | 0.820172 | 7.892059e-53 | -8.615850e-47 |
Msa0305840 | Msa1338400 | 0.802117 | 6.533188e-49 | -8.615850e-47 |
Msa0305840 | Msa1345810 | 0.806098 | 9.701810e-50 | -8.615850e-47 |
Msa0305840 | Msa1347890 | 0.807197 | 5.685729e-50 | -8.615850e-47 |
Msa0305840 | Msa1353890 | 0.811347 | 7.326207e-51 | -8.615850e-47 |
Msa0305840 | Msa1355450 | 0.803635 | 3.173080e-49 | -8.615850e-47 |
Msa0305840 | Msa1360020 | 0.822986 | 1.766185e-53 | -8.615850e-47 |
Msa0305840 | Msa1360420 | 0.807457 | 5.008545e-50 | -8.615850e-47 |
Msa0305840 | Msa1366550 | 0.808129 | 3.603778e-50 | -8.615850e-47 |
Msa0305840 | Msa1369920 | -0.809307 | 2.018781e-50 | -8.615850e-47 |
Msa0305840 | Msa1384750 | 0.803085 | 4.124507e-49 | -8.615850e-47 |
Msa0305840 | Msa1386890 | 0.805954 | 1.040396e-49 | -8.615850e-47 |
Msa0305840 | Msa1400340 | 0.826661 | 2.400223e-54 | -8.615850e-47 |
Msa0305840 | Msa1416730 | 0.811648 | 6.301882e-51 | -8.615850e-47 |
Msa0305840 | Msa1420920 | 0.805875 | 1.080779e-49 | -8.615850e-47 |
Msa0305840 | Msa1424630 | 0.825180 | 5.395336e-54 | -8.615850e-47 |
Msa0305840 | Msa1430550 | 0.865822 | 4.466394e-65 | -8.615850e-47 |
Msa0305840 | Msa1440900 | 0.815541 | 8.768380e-52 | -8.615850e-47 |
Msa0305840 | Msa1452530 | 0.815195 | 1.046993e-51 | -8.615850e-47 |
Msa0305840 | Msa1458680 | 0.807461 | 4.999310e-50 | -8.615850e-47 |
Msa0305840 | Msa1463030 | 0.817342 | 3.465463e-52 | -8.615850e-47 |
Msa0305840 | Msa1465210 | 0.856810 | 2.500804e-62 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0305840 | MtrunA17_Chr2g0334171 | 93.541 | 449 | 12 | 3 | 1 | 439 | 1 | 442 | 0.0 | 835 |
Msa0305840 | MtrunA17_Chr3g0120501 | 59.135 | 416 | 148 | 5 | 43 | 439 | 22 | 434 | 1.28e-163 | 468 |
Msa0305840 | MtrunA17_Chr7g0242351 | 47.654 | 405 | 190 | 5 | 50 | 435 | 34 | 435 | 3.17e-103 | 314 |
Msa0305840 | MtrunA17_Chr5g0429881 | 50.000 | 368 | 167 | 6 | 75 | 435 | 69 | 426 | 7.42e-103 | 313 |
Msa0305840 | MtrunA17_Chr4g0006841 | 47.697 | 304 | 156 | 2 | 129 | 431 | 2 | 303 | 2.21e-84 | 261 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0305840 | AT1G55730.1 | 68.293 | 410 | 126 | 3 | 32 | 438 | 32 | 440 | 0.0 | 552 |
Msa0305840 | AT1G55730.2 | 68.293 | 410 | 126 | 3 | 32 | 438 | 32 | 440 | 0.0 | 552 |
Msa0305840 | AT3G13320.1 | 70.483 | 393 | 108 | 4 | 45 | 434 | 49 | 436 | 0.0 | 551 |
Msa0305840 | AT1G55720.1 | 69.272 | 371 | 108 | 4 | 72 | 439 | 83 | 450 | 1.74e-179 | 509 |
Msa0305840 | AT1G55720.2 | 69.377 | 369 | 107 | 4 | 72 | 437 | 83 | 448 | 6.70e-179 | 507 |
Msa0305840 | AT5G01490.2 | 49.730 | 370 | 177 | 5 | 75 | 436 | 74 | 442 | 6.76e-114 | 342 |
Msa0305840 | AT5G01490.1 | 49.730 | 370 | 177 | 5 | 75 | 436 | 74 | 442 | 6.76e-114 | 342 |
Msa0305840 | AT2G38170.3 | 46.667 | 405 | 204 | 5 | 42 | 436 | 36 | 438 | 1.24e-108 | 329 |
Msa0305840 | AT2G38170.1 | 46.420 | 405 | 205 | 5 | 42 | 436 | 36 | 438 | 3.84e-108 | 327 |
Msa0305840 | AT3G51860.1 | 46.731 | 413 | 198 | 8 | 42 | 438 | 36 | 442 | 4.17e-105 | 320 |
Msa0305840 | AT3G51860.2 | 45.789 | 380 | 184 | 8 | 42 | 405 | 36 | 409 | 2.40e-88 | 277 |
Msa0305840 | AT2G38170.2 | 45.741 | 317 | 160 | 5 | 42 | 348 | 36 | 350 | 8.80e-71 | 229 |
Find 100 sgRNAs with CRISPR-Local
Find 646 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGGATGTGCATTCTTTAC+TGG | 0.168249 | 2_3:-63864964 | Msa0305840:CDS |
CTCAATCGGAAGCGATAATT+TGG | 0.177448 | 2_3:-63861028 | Msa0305840:CDS |
CAACTCAGGGTTGTTGTTGA+TGG | 0.270661 | 2_3:-63864819 | Msa0305840:CDS |
CTTACTACCCTTTGGTCCTT+TGG | 0.284264 | 2_3:-63865253 | Msa0305840:CDS |
CTCTGGCGGAAAACATGTTT+GGG | 0.294043 | 2_3:-63865211 | Msa0305840:CDS |
CCTTTCTATTCCTATATACT+TGG | 0.296965 | 2_3:-63856833 | Msa0305840:three_prime_UTR |
TCCAATATGCTTCTTGTCCT+TGG | 0.300655 | 2_3:-63864982 | Msa0305840:CDS |
CATTGCCCTTGATCACTTCA+TGG | 0.308209 | 2_3:+63856725 | None:intergenic |
CTTATTGGGTATTGCTCCTT+TGG | 0.319778 | 2_3:-63865175 | Msa0305840:CDS |
ATACCACAAACATCGATATC+TGG | 0.329138 | 2_3:+63859550 | None:intergenic |
GTTAAAATGAATGAAAACTA+TGG | 0.338183 | 2_3:+63856625 | None:intergenic |
CAAAGGAGCAATACCCAATA+AGG | 0.341740 | 2_3:+63865176 | None:intergenic |
GGTTTACTTAATGCAACATT+TGG | 0.344265 | 2_3:-63865093 | Msa0305840:CDS |
TCTCTGGCGGAAAACATGTT+TGG | 0.353870 | 2_3:-63865212 | Msa0305840:CDS |
TGCTATCATGTTTGCTGTAA+AGG | 0.362095 | 2_3:-63859691 | Msa0305840:CDS |
GTCATCTTGCTTCCAATTGT+AGG | 0.377243 | 2_3:-63859735 | Msa0305840:CDS |
ATCCCCTTCTGTGTGGTTGT+TGG | 0.381081 | 2_3:-63859337 | Msa0305840:CDS |
TCCAAGGACAAGAAGCATAT+TGG | 0.388568 | 2_3:+63864981 | None:intergenic |
AAAGAAGGAACCTGGTCAAC+TGG | 0.393990 | 2_3:+63864632 | None:intergenic |
TGTTCACTACAATAAACTTC+AGG | 0.394259 | 2_3:-63864935 | Msa0305840:CDS |
ATCTTCCTGCACTATTTCTC+TGG | 0.396428 | 2_3:-63865228 | Msa0305840:CDS |
TTTCCACAGGATATCACAAT+TGG | 0.399751 | 2_3:-63859594 | Msa0305840:intron |
CAAGCCTTTAAAATAATTTG+AGG | 0.409091 | 2_3:+63858006 | None:intergenic |
ACTCACTCCGAAGTTCATCT+TGG | 0.409420 | 2_3:-63864758 | Msa0305840:CDS |
TCTGCGGCATTTCCTACAAT+TGG | 0.429263 | 2_3:+63859723 | None:intergenic |
GACTAAATAGCGTGCTGGCC+TGG | 0.430121 | 2_3:-63856877 | Msa0305840:exon |
ATCAACATCTTACTACCCTT+TGG | 0.435660 | 2_3:-63865261 | Msa0305840:CDS |
GTTGTTCAGCAATCTTTACT+TGG | 0.446219 | 2_3:-63865015 | Msa0305840:CDS |
TTCTACACCGGACCAACACT+TGG | 0.453893 | 2_3:-63865117 | Msa0305840:CDS |
GTTGTTGTTGATGGCTGTAA+TGG | 0.461660 | 2_3:-63864810 | Msa0305840:CDS |
TACTACTATTCCAAGTATAT+AGG | 0.462170 | 2_3:+63856823 | None:intergenic |
CTCACTCCGAAGTTCATCTT+GGG | 0.462664 | 2_3:-63864757 | Msa0305840:CDS |
GATTGGTTACTTTGCCGAAA+AGG | 0.464500 | 2_3:+63856584 | None:intergenic |
ATCACAATTGGAGTTGCTGT+TGG | 0.467118 | 2_3:-63859582 | Msa0305840:CDS |
TTGTTGTTGATGGCTGTAAT+GGG | 0.471034 | 2_3:-63864809 | Msa0305840:CDS |
GCAGCTGCTGTTGTCAACTC+AGG | 0.475580 | 2_3:-63864833 | Msa0305840:CDS |
CCTTCTGTGTGGTTGTTGGA+TGG | 0.484096 | 2_3:-63859333 | Msa0305840:CDS |
GTGAAACCATGAAGTGATCA+AGG | 0.485005 | 2_3:-63856731 | Msa0305840:three_prime_UTR |
ACTGTACAGCTATACCTCTA+TGG | 0.490233 | 2_3:+63860953 | None:intergenic |
GTATGGGTATCAGTGTTGTC+TGG | 0.492249 | 2_3:-63860990 | Msa0305840:CDS |
CATGTACAGATGCCATTGCC+AGG | 0.496470 | 2_3:+63856859 | None:intergenic |
TCAAGGGCAATGCTCTGTAC+TGG | 0.497529 | 2_3:-63856714 | Msa0305840:three_prime_UTR |
TCTACACCGGACCAACACTT+GGG | 0.501683 | 2_3:-63865116 | Msa0305840:CDS |
AGAACTTGAGTTAACTCAAT+CGG | 0.503816 | 2_3:-63861042 | Msa0305840:CDS |
AGGGAATGGTTGAAGAAAGA+AGG | 0.503994 | 2_3:+63865333 | None:intergenic |
AACCCAGATATCGATGTTTG+TGG | 0.505182 | 2_3:-63859553 | Msa0305840:intron |
ATGGTGCATGGGAAAAGAAA+TGG | 0.517232 | 2_3:-63859314 | Msa0305840:CDS |
TGTGGTTGTTGGATGGTGCA+TGG | 0.523510 | 2_3:-63859326 | Msa0305840:CDS |
GGATGTGCATTCTTTACTGG+TGG | 0.525607 | 2_3:-63864961 | Msa0305840:CDS |
TTTGCTGATTCGTCTGGTGA+GGG | 0.529052 | 2_3:+63865314 | None:intergenic |
ATAGCGTGCTGGCCTGGCAA+TGG | 0.531373 | 2_3:-63856871 | Msa0305840:three_prime_UTR |
CCAAGTATATAGGAATAGAA+AGG | 0.532174 | 2_3:+63856833 | None:intergenic |
CAGCTGCTGTTGTCAACTCA+GGG | 0.534453 | 2_3:-63864832 | Msa0305840:CDS |
GGTAGTTGCATTTATGATGC+AGG | 0.540460 | 2_3:-63859242 | Msa0305840:intron |
GATGTGCATTCTTTACTGGT+GGG | 0.541335 | 2_3:-63864960 | Msa0305840:CDS |
GTGGTTGTTGGATGGTGCAT+GGG | 0.544841 | 2_3:-63859325 | Msa0305840:CDS |
AGAGAAATAGTGCAGGAAGA+TGG | 0.546337 | 2_3:+63865230 | None:intergenic |
TACCACAAACATCGATATCT+GGG | 0.548709 | 2_3:+63859551 | None:intergenic |
TGTATCTGCTGGTGACAAGA+TGG | 0.555992 | 2_3:-63865505 | Msa0305840:CDS |
CTACACCGGACCAACACTTG+GGG | 0.556277 | 2_3:-63865115 | Msa0305840:CDS |
TGATTCGTCTGGTGAGGGAA+TGG | 0.564065 | 2_3:+63865319 | None:intergenic |
GACTTCTAAGTTGAAAGTAA+AGG | 0.565138 | 2_3:+63864672 | None:intergenic |
CCATCCAACAACCACACAGA+AGG | 0.567175 | 2_3:+63859333 | None:intergenic |
CATATGGGTTCTGTATCTGC+TGG | 0.575337 | 2_3:-63865516 | Msa0305840:CDS |
ATACCTTGTGGATGCCATAG+AGG | 0.575475 | 2_3:-63860967 | Msa0305840:intron |
TGAGTGAAATGAAGCACGGC+GGG | 0.575534 | 2_3:+63864776 | None:intergenic |
TACACCGGACCAACACTTGG+GGG | 0.575655 | 2_3:-63865114 | Msa0305840:CDS |
GTAGCAGTATTAGCAGATGA+AGG | 0.585714 | 2_3:+63865441 | None:intergenic |
TTCCTGCACTATTTCTCTGG+CGG | 0.587848 | 2_3:-63865225 | Msa0305840:CDS |
TAACCTAGACGTTCAGCCAA+AGG | 0.591654 | 2_3:+63865159 | None:intergenic |
CCATGTTGAATGCTGAAAGC+AGG | 0.592324 | 2_3:+63856757 | None:intergenic |
CATCCAACAACCACACAGAA+GGG | 0.594191 | 2_3:+63859334 | None:intergenic |
GTGATGACTAAATAGCGTGC+TGG | 0.595597 | 2_3:-63856882 | Msa0305840:exon |
GAGCAACTTGCTTTCTACAC+CGG | 0.596724 | 2_3:-63865129 | Msa0305840:CDS |
GAAGGTGAAGTTGAACTGAA+AGG | 0.597192 | 2_3:+63865459 | None:intergenic |
TTCCGCCAGAGAAATAGTGC+AGG | 0.598512 | 2_3:+63865223 | None:intergenic |
GAAGATGGCCAAAGGACCAA+AGG | 0.600542 | 2_3:+63865245 | None:intergenic |
AAAGTAAAGGTAGCTTGCAT+AGG | 0.600612 | 2_3:+63864685 | None:intergenic |
AAGATGGCCAAAGGACCAAA+GGG | 0.603293 | 2_3:+63865246 | None:intergenic |
AAATCTTGATAGAGATAAGA+CGG | 0.604817 | 2_3:+63864730 | None:intergenic |
CCTGCTTTCAGCATTCAACA+TGG | 0.609387 | 2_3:-63856757 | Msa0305840:three_prime_UTR |
AGCAATACCCAATAAGGCGA+AGG | 0.611495 | 2_3:+63865182 | None:intergenic |
GTACATGTAGACCCTAAAAG+TGG | 0.612173 | 2_3:-63857941 | Msa0305840:intron |
CAGTAAAGAATGCACATCCA+AGG | 0.612732 | 2_3:+63864965 | None:intergenic |
GAATCGAAATGAAAAGAGTG+TGG | 0.615322 | 2_3:+63865402 | None:intergenic |
GGACTTCCCAAGATGAACTT+CGG | 0.619090 | 2_3:+63864751 | None:intergenic |
ATCCAACAACCACACAGAAG+GGG | 0.630450 | 2_3:+63859335 | None:intergenic |
TGAATCATTGAATATGTCAG+TGG | 0.638115 | 2_3:-63859769 | Msa0305840:CDS |
TAGCAGCTGCATAATGCTAG+TGG | 0.640892 | 2_3:-63864708 | Msa0305840:CDS |
TGAAACCATGAAGTGATCAA+GGG | 0.646317 | 2_3:-63856730 | Msa0305840:three_prime_UTR |
GGTGTAGAAAGCAAGTTGCT+CGG | 0.647936 | 2_3:+63865131 | None:intergenic |
TAGTGCAGGAAGATGGCCAA+AGG | 0.652333 | 2_3:+63865237 | None:intergenic |
AAGTGAAAACTCTGACGAGG+AGG | 0.660035 | 2_3:-63861066 | Msa0305840:CDS |
TTTGTAGATCCCCTTCTGTG+TGG | 0.673448 | 2_3:-63859344 | Msa0305840:intron |
AGTGTTGTCTGGATACCTTG+TGG | 0.676735 | 2_3:-63860979 | Msa0305840:CDS |
GGAGTGAGTGAAATGAAGCA+CGG | 0.679307 | 2_3:+63864772 | None:intergenic |
ATACCTCTATGGCATCCACA+AGG | 0.684822 | 2_3:+63860964 | None:intergenic |
TACAAGTGAAAACTCTGACG+AGG | 0.708110 | 2_3:-63861069 | Msa0305840:CDS |
GATAGCACTTGCATGCTCTG+CGG | 0.744200 | 2_3:+63859707 | None:intergenic |
GTGAGTGAAATGAAGCACGG+CGG | 0.755080 | 2_3:+63864775 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCAAAAAATAATGATTAA+TGG | + | chr2_3:63857950-63857969 | None:intergenic | 10.0% |
!! | AATTATATGATAAATGATTA+TGG | + | chr2_3:63860379-63860398 | None:intergenic | 10.0% |
!! | TATTAATTAACTTCTTAAAA+CGG | - | chr2_3:63862621-63862640 | Msa0305840:intron | 10.0% |
!!! | AATTTGTTAACAAATATGAA+TGG | + | chr2_3:63857510-63857529 | None:intergenic | 15.0% |
!! | TATACAAACAATTTCTTAAA+AGG | + | chr2_3:63857541-63857560 | None:intergenic | 15.0% |
!! | ATAAATTAAATCCCATTAAA+AGG | - | chr2_3:63858308-63858327 | Msa0305840:intron | 15.0% |
!!! | TATTATTTTTACCTATTAAC+CGG | + | chr2_3:63858627-63858646 | None:intergenic | 15.0% |
!! | AATCAAAAAATAATGATTGA+TGG | + | chr2_3:63859290-63859309 | None:intergenic | 15.0% |
!!! | TCTTTTATTTCTATTTGATA+TGG | - | chr2_3:63859737-63859756 | Msa0305840:CDS | 15.0% |
!!! | TTATTATTTTACCTATTAAC+CGG | + | chr2_3:63859971-63859990 | None:intergenic | 15.0% |
!! | AATAAAATAAATAGATGATG+TGG | - | chr2_3:63859986-63860005 | Msa0305840:intron | 15.0% |
!!! | TTTTTATAAGCAAATATTAG+TGG | + | chr2_3:63860614-63860633 | None:intergenic | 15.0% |
!! | TATTGTATAATAGAGAAAAA+TGG | + | chr2_3:63860900-63860919 | None:intergenic | 15.0% |
!!! | TTTTATTTACCCAAAATTAT+GGG | + | chr2_3:63861328-63861347 | None:intergenic | 15.0% |
!! | ATTAATTAACTTCTTAAAAC+GGG | - | chr2_3:63862622-63862641 | Msa0305840:intron | 15.0% |
!!! | TATAAAAATGCATTACTTTT+TGG | - | chr2_3:63863606-63863625 | Msa0305840:intron | 15.0% |
!! | CAATATCTCATTTAATTATA+TGG | - | chr2_3:63863680-63863699 | Msa0305840:intron | 15.0% |
!!! | TTTTCAATTTGGTTTTAAAA+TGG | - | chr2_3:63863815-63863834 | Msa0305840:intron | 15.0% |
!!! | TTTCAATTTGGTTTTAAAAT+GGG | - | chr2_3:63863816-63863835 | Msa0305840:intron | 15.0% |
!!! | AAATTCTTTTATCTTTTAGT+TGG | - | chr2_3:63864537-63864556 | Msa0305840:intron | 15.0% |
!!! | AATTCTTTTATCTTTTAGTT+GGG | - | chr2_3:63864538-63864557 | Msa0305840:intron | 15.0% |
!!! | TCTTTTCTTTCAATTTGATA+TGG | - | chr2_3:63858394-63858413 | Msa0305840:intron | 20.0% |
!! | AATAAAATAAACAGATGATG+TGG | - | chr2_3:63858643-63858662 | Msa0305840:intron | 20.0% |
!! | ACAAACAAAGGATTAAAATA+GGG | - | chr2_3:63859116-63859135 | Msa0305840:intron | 20.0% |
!! | ATACATTAAATCCCATTAAA+AGG | - | chr2_3:63859651-63859670 | Msa0305840:intron | 20.0% |
!! | AAACTATAAGAGAAACTATT+AGG | - | chr2_3:63860106-63860125 | Msa0305840:intron | 20.0% |
!! | AACTATTAGGAAAAATTTAG+AGG | - | chr2_3:63860119-63860138 | Msa0305840:intron | 20.0% |
!!! | TTAGTTTTACATCATTCATT+TGG | + | chr2_3:63860264-63860283 | None:intergenic | 20.0% |
!!! | TAGTTGTTATTTTGTTAATG+AGG | - | chr2_3:63860639-63860658 | Msa0305840:intron | 20.0% |
!!! | AGTTGTTATTTTGTTAATGA+GGG | - | chr2_3:63860640-63860659 | Msa0305840:intron | 20.0% |
!! | ATACTATGTAGTGATAATTT+AGG | + | chr2_3:63860718-63860737 | None:intergenic | 20.0% |
!!! | TCATTTATACCCATAATTTT+GGG | - | chr2_3:63861316-63861335 | Msa0305840:intron | 20.0% |
!!! | CTTTTATTTACCCAAAATTA+TGG | + | chr2_3:63861329-63861348 | None:intergenic | 20.0% |
!! | GTATTCATGGAATAAAATAT+AGG | + | chr2_3:63862392-63862411 | None:intergenic | 20.0% |
!! | ATACTATTATGTGAATAAAC+CGG | - | chr2_3:63862560-63862579 | Msa0305840:intron | 20.0% |
!!! | TATGTAAGACATGAATTTTT+TGG | + | chr2_3:63862934-63862953 | None:intergenic | 20.0% |
!! | TGAAACCTAATTCAAAAATT+AGG | - | chr2_3:63863263-63863282 | Msa0305840:intron | 20.0% |
!!! | TTTTGCCTAATTTTTGAATT+AGG | + | chr2_3:63863271-63863290 | None:intergenic | 20.0% |
!! | ACAAGATATTTGCATTTAAA+AGG | + | chr2_3:63863754-63863773 | None:intergenic | 20.0% |
!! | AAATATATGCATATCTTGAA+AGG | + | chr2_3:63864267-63864286 | None:intergenic | 20.0% |
!!! | TATGCATATATTTTTCTCTT+TGG | - | chr2_3:63864274-63864293 | Msa0305840:intron | 20.0% |
!! | CATTTATCTTCAAATTAGTT+AGG | + | chr2_3:63864501-63864520 | None:intergenic | 20.0% |
!! | CTAACTAATTTGAAGATAAA+TGG | - | chr2_3:63864499-63864518 | Msa0305840:intron | 20.0% |
!!! | ATTCTTTTATCTTTTAGTTG+GGG | - | chr2_3:63864539-63864558 | Msa0305840:intron | 20.0% |
!! | ATAGGTAGATTATATCATAT+AGG | + | chr2_3:63864749-63864768 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTAAGCAATGCA+TGG | - | chr2_3:63864871-63864890 | Msa0305840:intron | 20.0% |
!!! | TTTTTTTTTAAGCAATGCAT+GGG | - | chr2_3:63864872-63864891 | Msa0305840:intron | 20.0% |
!! | TTGACCAAAAAAAAATAAAG+TGG | + | chr2_3:63864989-63865008 | None:intergenic | 20.0% |
!!! | ATACTATATTGAATTTTGAG+TGG | - | chr2_3:63865357-63865376 | Msa0305840:CDS | 20.0% |
!! | GTTAAAATGAATGAAAACTA+TGG | + | chr2_3:63865410-63865429 | None:intergenic | 20.0% |
! | AAATCTTGATAGAGATAAGA+CGG | + | chr2_3:63857305-63857324 | None:intergenic | 25.0% |
!! | TTGTATATATGCTATTTGTG+AGG | - | chr2_3:63857554-63857573 | Msa0305840:intron | 25.0% |
! | ACAAACACAGGATTAAAATA+GGG | - | chr2_3:63857776-63857795 | Msa0305840:intron | 25.0% |
! | TAAAATAGGGTCAATAGTTA+AGG | - | chr2_3:63857789-63857808 | Msa0305840:intron | 25.0% |
! | TCCATATATGAGAAATACTA+AGG | - | chr2_3:63857846-63857865 | Msa0305840:intron | 25.0% |
! | ACCTTAGTATTTCTCATATA+TGG | + | chr2_3:63857850-63857869 | None:intergenic | 25.0% |
! | TAATGATTAATGGTTGAAAC+CGG | + | chr2_3:63857940-63857959 | None:intergenic | 25.0% |
!!! | CATGTTTTAGTTGAAAGTTA+GGG | - | chr2_3:63858269-63858288 | Msa0305840:intron | 25.0% |
!! | TTTAATGGGAACCTTTTAAT+GGG | + | chr2_3:63858322-63858341 | None:intergenic | 25.0% |
!! | AATTTGATATGGACTGTAAA+TGG | - | chr2_3:63858405-63858424 | Msa0305840:intron | 25.0% |
!! | ATTTGATATGGACTGTAAAT+GGG | - | chr2_3:63858406-63858425 | Msa0305840:intron | 25.0% |
! | AAACTACAAGAGAAACTATT+AGG | - | chr2_3:63858757-63858776 | Msa0305840:intron | 25.0% |
! | AACTATTAGGAAAGATTTAG+AGG | - | chr2_3:63858770-63858789 | Msa0305840:intron | 25.0% |
! | GTTCTATCATAAACCATATT+TGG | + | chr2_3:63858810-63858829 | None:intergenic | 25.0% |
! | TGGTTTATGATAGAACATTA+TGG | - | chr2_3:63858814-63858833 | Msa0305840:intron | 25.0% |
!!! | TTAGTTTTACATCGTTCATT+TGG | + | chr2_3:63858921-63858940 | None:intergenic | 25.0% |
! | CACAAACAAAGGATTAAAAT+AGG | - | chr2_3:63859115-63859134 | Msa0305840:intron | 25.0% |
! | TAAAATAGGGTCAATAGTTA+AGG | - | chr2_3:63857789-63857808 | Msa0305840:intron | 25.0% |
!!! | TTTTTCTCCATAATTTGTAC+CGG | - | chr2_3:63859258-63859277 | Msa0305840:CDS | 25.0% |
!! | TTTAATGGGAACCTTTTAAT+GGG | + | chr2_3:63858322-63858341 | None:intergenic | 25.0% |
!! | TATTTGATATGGACTGTAAA+TGG | - | chr2_3:63859748-63859767 | Msa0305840:CDS | 25.0% |
!! | ATTTGATATGGACTGTAAAT+GGG | - | chr2_3:63858406-63858425 | Msa0305840:intron | 25.0% |
!!! | TGAGAAAATACATCTTGTTT+TGG | + | chr2_3:63859938-63859957 | None:intergenic | 25.0% |
! | TATATAGATGAGAAATGCTA+GGG | + | chr2_3:63860035-63860054 | None:intergenic | 25.0% |
! | ATATATAGATGAGAAATGCT+AGG | + | chr2_3:63860036-63860055 | None:intergenic | 25.0% |
! | AAATTTAGAGGTTAATGAGT+TGG | - | chr2_3:63860131-63860150 | Msa0305840:intron | 25.0% |
! | GTTCTGTTATAAACCATATT+TGG | + | chr2_3:63860159-63860178 | None:intergenic | 25.0% |
! | TGGTTTATAACAGAACATTA+TGG | - | chr2_3:63860163-63860182 | Msa0305840:intron | 25.0% |
!! | TAATCTCCTTAAACTTTTAC+AGG | - | chr2_3:63860933-63860952 | Msa0305840:intron | 25.0% |
!!! | TTTGTTATTTGTTATTCTCG+TGG | - | chr2_3:63861131-63861150 | Msa0305840:intron | 25.0% |
!! | CTCATTTATACCCATAATTT+TGG | - | chr2_3:63861315-63861334 | Msa0305840:intron | 25.0% |
!! | GTAAATAAAAGAAGCATGTA+TGG | - | chr2_3:63861338-63861357 | Msa0305840:intron | 25.0% |
! | TCTGAATAGTACCAAAAATA+TGG | + | chr2_3:63861437-63861456 | None:intergenic | 25.0% |
!!! | GCATTGAGTTTTTAAGAATT+GGG | - | chr2_3:63861504-63861523 | Msa0305840:intron | 25.0% |
!! | ATCATTAGGATTTTCTATGT+TGG | + | chr2_3:63861706-63861725 | None:intergenic | 25.0% |
! | ATACTTTCTGATAGATCATT+AGG | + | chr2_3:63861720-63861739 | None:intergenic | 25.0% |
! | TCGTAAATTTAATCTGTTGT+TGG | - | chr2_3:63861790-63861809 | Msa0305840:intron | 25.0% |
!! | AATACTCTGTTTTATAGCAT+GGG | + | chr2_3:63861960-63861979 | None:intergenic | 25.0% |
!! | TAATACTCTGTTTTATAGCA+TGG | + | chr2_3:63861961-63861980 | None:intergenic | 25.0% |
!! | GCTATAAAACAGAGTATTAT+TGG | - | chr2_3:63861962-63861981 | Msa0305840:intron | 25.0% |
! | AAAGTCATGAAAAGGAAATA+TGG | - | chr2_3:63862005-63862024 | Msa0305840:intron | 25.0% |
! | AATACTGTTTAATCCGTTAA+TGG | - | chr2_3:63862407-63862426 | Msa0305840:intron | 25.0% |
! | AACTGTTACAAATAGTTCTT+TGG | - | chr2_3:63862512-63862531 | Msa0305840:intron | 25.0% |
! | ACTGTTACAAATAGTTCTTT+GGG | - | chr2_3:63862513-63862532 | Msa0305840:intron | 25.0% |
! | CATTAATTCCTTATAAAGTG+AGG | + | chr2_3:63862874-63862893 | None:intergenic | 25.0% |
! | CTCACTTTATAAGGAATTAA+TGG | - | chr2_3:63862872-63862891 | Msa0305840:intron | 25.0% |
!!! | AAGACATGAATTTTTTGGTT+TGG | + | chr2_3:63862929-63862948 | None:intergenic | 25.0% |
!! | ATGAACTCAGAATTTTTCTT+AGG | + | chr2_3:63863148-63863167 | None:intergenic | 25.0% |
! | TTATTTATCATGTCTTCGAT+AGG | - | chr2_3:63863172-63863191 | Msa0305840:intron | 25.0% |
!! | GATTATTCTATTGAAGTATC+TGG | + | chr2_3:63863584-63863603 | None:intergenic | 25.0% |
!!! | ATCAATGTTGGTTTTCAATT+TGG | - | chr2_3:63863804-63863823 | Msa0305840:intron | 25.0% |
!!! | GGAACCTCAAATTATTTTAA+AGG | - | chr2_3:63864022-63864041 | Msa0305840:intron | 25.0% |
!!! | CAAGCCTTTAAAATAATTTG+AGG | + | chr2_3:63864029-63864048 | None:intergenic | 25.0% |
!! | ATATTTTTCTCTTTGGACTT+TGG | - | chr2_3:63864281-63864300 | Msa0305840:intron | 25.0% |
! | TACTATAGAGAATGTAGATT+TGG | - | chr2_3:63864371-63864390 | Msa0305840:intron | 25.0% |
! | GGATGAATTTAGTAAAAACT+TGG | - | chr2_3:63864445-63864464 | Msa0305840:intron | 25.0% |
!!! | TTCTTTTATCTTTTAGTTGG+GGG | - | chr2_3:63864540-63864559 | Msa0305840:intron | 25.0% |
! | CTAATTCTAAATGTGAACAT+AGG | + | chr2_3:63864620-63864639 | None:intergenic | 25.0% |
! | GTTACATATTCTACAAACAT+AGG | + | chr2_3:63864767-63864786 | None:intergenic | 25.0% |
!!! | TTTTTTTTAAGCAATGCATG+GGG | - | chr2_3:63864873-63864892 | Msa0305840:intron | 25.0% |
! | AAATCTACTGATATATATGC+AGG | - | chr2_3:63865128-63865147 | Msa0305840:CDS | 25.0% |
! | TACTACTATTCCAAGTATAT+AGG | + | chr2_3:63865212-63865231 | None:intergenic | 25.0% |
!!! | GCTGAAGATTTTTTTTTTTG+GGG | + | chr2_3:63865256-63865275 | None:intergenic | 25.0% |
!!! | GGCTGAAGATTTTTTTTTTT+GGG | + | chr2_3:63865257-63865276 | None:intergenic | 25.0% |
!!! | AGGCTGAAGATTTTTTTTTT+TGG | + | chr2_3:63865258-63865277 | None:intergenic | 25.0% |
!! | AATTTTATCTTCAGCCTTTT+CGG | - | chr2_3:63865434-63865453 | Msa0305840:CDS | 25.0% |
! | AAAAAACACTTTGCAATGAT+TGG | + | chr2_3:63865468-63865487 | None:intergenic | 25.0% |
! | GATGATGATGATGATGATTT+AGG | + | chr2_3:63856666-63856685 | None:intergenic | 30.0% |
GGTTTACTTAATGCAACATT+TGG | - | chr2_3:63856939-63856958 | Msa0305840:intron | 30.0% | |
TGTTCACTACAATAAACTTC+AGG | - | chr2_3:63857097-63857116 | Msa0305840:intron | 30.0% | |
!! | TAAACTTCAGGTTTTCAACA+AGG | - | chr2_3:63857109-63857128 | Msa0305840:intron | 30.0% |
! | GACTTCTAAGTTGAAAGTAA+AGG | + | chr2_3:63857363-63857382 | None:intergenic | 30.0% |
AAGTAAAATGTGGCAAAAGA+AGG | + | chr2_3:63857418-63857437 | None:intergenic | 30.0% | |
GTAGAAAGCAAAGTAAAATG+TGG | + | chr2_3:63857428-63857447 | None:intergenic | 30.0% | |
AATTTCTCGCCTGTAAAATA+AGG | + | chr2_3:63857663-63857682 | None:intergenic | 30.0% | |
CACAAACACAGGATTAAAAT+AGG | - | chr2_3:63857775-63857794 | Msa0305840:intron | 30.0% | |
!! | TTTTACTCCATAACTTGTAC+CGG | - | chr2_3:63857918-63857937 | Msa0305840:intron | 30.0% |
! | TTCAAGTTCAAGGATTCAAT+GGG | - | chr2_3:63858029-63858048 | Msa0305840:intron | 30.0% |
!!! | TCTGGATGCAATTTTTTTAC+AGG | + | chr2_3:63858056-63858075 | None:intergenic | 30.0% |
AGTAAATAGAACGTTTCTTC+TGG | + | chr2_3:63858074-63858093 | None:intergenic | 30.0% | |
GTAACTGAACTTCAAAAATG+GGG | + | chr2_3:63858114-63858133 | None:intergenic | 30.0% | |
GGTAACTGAACTTCAAAAAT+GGG | + | chr2_3:63858115-63858134 | None:intergenic | 30.0% | |
TGGTAACTGAACTTCAAAAA+TGG | + | chr2_3:63858116-63858135 | None:intergenic | 30.0% | |
AAAGATGTGAAGAAAGATTG+TGG | + | chr2_3:63858136-63858155 | None:intergenic | 30.0% | |
GGAAAAGATTCAAACATGTT+TGG | + | chr2_3:63858166-63858185 | None:intergenic | 30.0% | |
! | GAATCTTTTCCAGTTTAAGA+CGG | - | chr2_3:63858175-63858194 | Msa0305840:intron | 30.0% |
CCTAACTTTCAACTAAAACA+TGG | + | chr2_3:63858271-63858290 | None:intergenic | 30.0% | |
!!! | CCATGTTTTAGTTGAAAGTT+AGG | - | chr2_3:63858268-63858287 | Msa0305840:intron | 30.0% |
! | CTTTAATGGGAACCTTTTAA+TGG | + | chr2_3:63858323-63858342 | None:intergenic | 30.0% |
!!! | TTTTTTGTGTGTCAATAGTG+CGG | - | chr2_3:63858563-63858582 | Msa0305840:intron | 30.0% |
ATGATGTGGCGAATTATAAT+CGG | - | chr2_3:63858657-63858676 | Msa0305840:intron | 30.0% | |
AACATAGATGAGAAATGCTA+GGG | + | chr2_3:63858692-63858711 | None:intergenic | 30.0% | |
AGATTTAGAGGTAAATGAGT+TGG | - | chr2_3:63858782-63858801 | Msa0305840:intron | 30.0% | |
! | AAATGAGTTGGATCCAAATA+TGG | - | chr2_3:63858794-63858813 | Msa0305840:intron | 30.0% |
AGTGATACACATGCATTATT+TGG | - | chr2_3:63858954-63858973 | Msa0305840:intron | 30.0% | |
! | TGTTGATAGACTTGAAGATA+AGG | - | chr2_3:63858997-63859016 | Msa0305840:intron | 30.0% |
! | GTTGATAGACTTGAAGATAA+GGG | - | chr2_3:63858998-63859017 | Msa0305840:intron | 30.0% |
TTGATAGACTTGAAGATAAG+GGG | - | chr2_3:63858999-63859018 | Msa0305840:intron | 30.0% | |
TTAAGGCCACTATCATAATA+GGG | - | chr2_3:63859027-63859046 | Msa0305840:intron | 30.0% | |
TATTGACCCTATTATGATAG+TGG | + | chr2_3:63859036-63859055 | None:intergenic | 30.0% | |
CATAATAGGGTCAATAGTTA+AGG | - | chr2_3:63859040-63859059 | Msa0305840:intron | 30.0% | |
! | AATCCTTTGTTTGTGTTTGA+GGG | + | chr2_3:63859110-63859129 | None:intergenic | 30.0% |
! | TAATCCTTTGTTTGTGTTTG+AGG | + | chr2_3:63859111-63859130 | None:intergenic | 30.0% |
TCCAGATATGAGAAATGATA+AGG | - | chr2_3:63859186-63859205 | Msa0305840:intron | 30.0% | |
ACCTTATCATTTCTCATATC+TGG | + | chr2_3:63859190-63859209 | None:intergenic | 30.0% | |
! | TAATGATTGATGGTTGAAAC+CGG | + | chr2_3:63859280-63859299 | None:intergenic | 30.0% |
!!! | TCTGGATGCAATTTTTTTAC+AGG | + | chr2_3:63858056-63858075 | None:intergenic | 30.0% |
GAAACTGAACTTCAAAAATG+GGG | + | chr2_3:63859462-63859481 | None:intergenic | 30.0% | |
GGAAACTGAACTTCAAAAAT+GGG | + | chr2_3:63859463-63859482 | None:intergenic | 30.0% | |
TGGAAACTGAACTTCAAAAA+TGG | + | chr2_3:63859464-63859483 | None:intergenic | 30.0% | |
AATGATGTGAAGAAAGATTG+TGG | + | chr2_3:63859484-63859503 | None:intergenic | 30.0% | |
! | CTTTTCCAATTTAAGAGAGA+AGG | - | chr2_3:63859527-63859546 | Msa0305840:intron | 30.0% |
CATGTTTCAGTTGAAAGTTA+GGG | - | chr2_3:63859612-63859631 | Msa0305840:intron | 30.0% | |
! | CTTTAATGGGAACCTTTTAA+TGG | + | chr2_3:63858323-63858342 | None:intergenic | 30.0% |
!!! | TTTTTTGTGTGTGAATAGTG+TGG | - | chr2_3:63859904-63859923 | Msa0305840:intron | 30.0% |
! | ATTTTCTCAACCTATACAAC+CGG | - | chr2_3:63859949-63859968 | Msa0305840:intron | 30.0% |
! | TAATGAGTTGGATCCAAATA+TGG | - | chr2_3:63860143-63860162 | Msa0305840:intron | 30.0% |
AGTGATACACATGCATTATT+TGG | - | chr2_3:63858954-63858973 | Msa0305840:intron | 30.0% | |
! | GATAAATGATTATGGCCTTA+AGG | + | chr2_3:63860371-63860390 | None:intergenic | 30.0% |
! | AAACTATGTAGTCTGATTTG+AGG | + | chr2_3:63860408-63860427 | None:intergenic | 30.0% |
GATATTATGTAGTGACACAT+GGG | + | chr2_3:63860673-63860692 | None:intergenic | 30.0% | |
TGATATTATGTAGTGACACA+TGG | + | chr2_3:63860674-63860693 | None:intergenic | 30.0% | |
TAATTTAGGAGAGAGACATA+GGG | + | chr2_3:63860704-63860723 | None:intergenic | 30.0% | |
ATAATTTAGGAGAGAGACAT+AGG | + | chr2_3:63860705-63860724 | None:intergenic | 30.0% | |
TTAAGGAGATTAACTGTGAA+GGG | + | chr2_3:63860925-63860944 | None:intergenic | 30.0% | |
TTTAAGGAGATTAACTGTGA+AGG | + | chr2_3:63860926-63860945 | None:intergenic | 30.0% | |
CAACTTCCTGTAAAAGTTTA+AGG | + | chr2_3:63860942-63860961 | None:intergenic | 30.0% | |
AGAACTTGAGTTAACTCAAT+CGG | - | chr2_3:63860990-63861009 | Msa0305840:CDS | 30.0% | |
!!! | AATTTGGCTTGCAATTTTGA+CGG | - | chr2_3:63861020-63861039 | Msa0305840:CDS | 30.0% |
TACTATTCAGAAGAAACGAT+GGG | - | chr2_3:63861446-63861465 | Msa0305840:intron | 30.0% | |
!! | AGTGATGATGACTTTTGATA+TGG | - | chr2_3:63861482-63861501 | Msa0305840:intron | 30.0% |
!! | GGCATTGAGTTTTTAAGAAT+TGG | - | chr2_3:63861503-63861522 | Msa0305840:intron | 30.0% |
TTAAGAATTGGGTGAAATAG+TGG | - | chr2_3:63861515-63861534 | Msa0305840:intron | 30.0% | |
TTATTGAAATCTTAGTGAGC+TGG | + | chr2_3:63861664-63861683 | None:intergenic | 30.0% | |
TTCTATGTTGGATGGTATAA+TGG | + | chr2_3:63861694-63861713 | None:intergenic | 30.0% | |
! | TTAGGATTTTCTATGTTGGA+TGG | + | chr2_3:63861702-63861721 | None:intergenic | 30.0% |
!! | GATCTATCAGAAAGTATTTG+TGG | - | chr2_3:63861723-63861742 | Msa0305840:intron | 30.0% |
CCAAAAATAAAAGGCTGATA+AGG | + | chr2_3:63861874-63861893 | None:intergenic | 30.0% | |
!!! | CCTTATCAGCCTTTTATTTT+TGG | - | chr2_3:63861871-63861890 | Msa0305840:intron | 30.0% |
ATACCAGGACCAAAAATAAA+AGG | + | chr2_3:63861883-63861902 | None:intergenic | 30.0% | |
GAGTATTATTGGAAATCATG+AGG | - | chr2_3:63861973-63861992 | Msa0305840:intron | 30.0% | |
!! | AGGATTCTAAAGTCATGAAA+AGG | - | chr2_3:63861997-63862016 | Msa0305840:intron | 30.0% |
AAAAGGAAATATGGAAACAG+AGG | - | chr2_3:63862014-63862033 | Msa0305840:intron | 30.0% | |
AGAATGAATAGATGTTTCAG+TGG | + | chr2_3:63862168-63862187 | None:intergenic | 30.0% | |
TGAATCATTGAATATGTCAG+TGG | - | chr2_3:63862263-63862282 | Msa0305840:intron | 30.0% | |
!! | AACGGATTAAACAGTATTCA+TGG | + | chr2_3:63862405-63862424 | None:intergenic | 30.0% |
GGAAAAGTTGAATCCATTAA+CGG | + | chr2_3:63862423-63862442 | None:intergenic | 30.0% | |
GAACTATTTGTAACAGTTCA+AGG | + | chr2_3:63862510-63862529 | None:intergenic | 30.0% | |
CTGTTACAAATAGTTCTTTG+GGG | - | chr2_3:63862514-63862533 | Msa0305840:intron | 30.0% | |
CTGTCAAGAAAATTTCATAG+GGG | + | chr2_3:63862837-63862856 | None:intergenic | 30.0% | |
GCTGTCAAGAAAATTTCATA+GGG | + | chr2_3:63862838-63862857 | None:intergenic | 30.0% | |
TGCTGTCAAGAAAATTTCAT+AGG | + | chr2_3:63862839-63862858 | None:intergenic | 30.0% | |
TTGATGTTCCTCACTTTATA+AGG | - | chr2_3:63862863-63862882 | Msa0305840:intron | 30.0% | |
TCTAGTCTGTTAAATAAGCT+TGG | + | chr2_3:63863114-63863133 | None:intergenic | 30.0% | |
TTAACAGACTAGAGATATAG+AGG | - | chr2_3:63863121-63863140 | Msa0305840:intron | 30.0% | |
TAACAGACTAGAGATATAGA+GGG | - | chr2_3:63863122-63863141 | Msa0305840:intron | 30.0% | |
TGAATTATCATGTCTTCGAT+AGG | - | chr2_3:63863204-63863223 | Msa0305840:intron | 30.0% | |
ATGAATTCAGAAACATGTGA+AGG | + | chr2_3:63863462-63863481 | None:intergenic | 30.0% | |
AGCAAGTAATGATACAAAAC+AGG | + | chr2_3:63863498-63863517 | None:intergenic | 30.0% | |
!!! | TGCATTACTTTTTGGATATC+AGG | - | chr2_3:63863614-63863633 | Msa0305840:intron | 30.0% |
! | CTTTTTGGATATCAGGAAAA+TGG | - | chr2_3:63863621-63863640 | Msa0305840:intron | 30.0% |
! | TTATCTTATTTCTCTTGCTC+TGG | - | chr2_3:63863707-63863726 | Msa0305840:intron | 30.0% |
GGATAAAAGCAATGTAAAGA+TGG | + | chr2_3:63863993-63864012 | None:intergenic | 30.0% | |
!! | TACATTGCTTTTATCCTTAC+AGG | - | chr2_3:63863997-63864016 | Msa0305840:intron | 30.0% |
AAAGTCTACACTATGAATCT+AGG | + | chr2_3:63864139-63864158 | None:intergenic | 30.0% | |
TCATAGTGTAGACTTTATCA+CGG | - | chr2_3:63864143-63864162 | Msa0305840:intron | 30.0% | |
ATGAATCTCTAATTCTCCTA+TGG | - | chr2_3:63864180-63864199 | Msa0305840:intron | 30.0% | |
TTGAAAGATATCTTAGCCAT+AGG | + | chr2_3:63864199-63864218 | None:intergenic | 30.0% | |
!! | TCTTTTATCTTTTAGTTGGG+GGG | - | chr2_3:63864541-63864560 | Msa0305840:intron | 30.0% |
GATTATATCATATAGGAGCA+CGG | + | chr2_3:63864742-63864761 | None:intergenic | 30.0% | |
TAGAATATGTAACTTTGCGT+TGG | - | chr2_3:63864774-63864793 | Msa0305840:CDS | 30.0% | |
TTCAGCAATTTCCATCATTT+AGG | - | chr2_3:63864900-63864919 | Msa0305840:intron | 30.0% | |
TACTATTAAGGCCTAAATGA+TGG | + | chr2_3:63864914-63864933 | None:intergenic | 30.0% | |
AACTCCTGTCTTTACTATTA+AGG | + | chr2_3:63864926-63864945 | None:intergenic | 30.0% | |
! | AAAGACAGGAGTTTACATTT+TGG | - | chr2_3:63864933-63864952 | Msa0305840:CDS | 30.0% |
ATATAGTGTATTCCTAAGCT+AGG | - | chr2_3:63864959-63864978 | Msa0305840:CDS | 30.0% | |
!!! | CGGTCCACTTTATTTTTTTT+TGG | - | chr2_3:63864982-63865001 | Msa0305840:CDS | 30.0% |
!!! | ATTTTTTTTTGGTCAAGTGC+CGG | - | chr2_3:63864993-63865012 | Msa0305840:CDS | 30.0% |
AATTGACAGTATCAAAAACG+TGG | + | chr2_3:63865020-63865039 | None:intergenic | 30.0% | |
CAATCTGAATACTAGATGAA+TGG | - | chr2_3:63865049-63865068 | Msa0305840:CDS | 30.0% | |
CCAAGTATATAGGAATAGAA+AGG | + | chr2_3:63865202-63865221 | None:intergenic | 30.0% | |
CCTTTCTATTCCTATATACT+TGG | - | chr2_3:63865199-63865218 | Msa0305840:CDS | 30.0% | |
GAATCGAAATGAAAAGAGTG+TGG | + | chr2_3:63856633-63856652 | None:intergenic | 35.0% | |
!!! | TATACTTTTGCTGATTCGTC+TGG | + | chr2_3:63856727-63856746 | None:intergenic | 35.0% |
ATCAACATCTTACTACCCTT+TGG | - | chr2_3:63856771-63856790 | Msa0305840:three_prime_UTR | 35.0% | |
GTTGTTCAGCAATCTTTACT+TGG | - | chr2_3:63857017-63857036 | Msa0305840:intron | 35.0% | |
!! | TTGTTGTTGATGGCTGTAAT+GGG | - | chr2_3:63857223-63857242 | Msa0305840:intron | 35.0% |
! | AAAGTAAAGGTAGCTTGCAT+AGG | + | chr2_3:63857350-63857369 | None:intergenic | 35.0% |
! | TTTTTATACTCCAGTTGACC+AGG | - | chr2_3:63857390-63857409 | Msa0305840:intron | 35.0% |
GCTTTCTACAACTGTATCTT+AGG | - | chr2_3:63857439-63857458 | Msa0305840:intron | 35.0% | |
TTAACACACAGGAAAAAGAC+AGG | + | chr2_3:63857599-63857618 | None:intergenic | 35.0% | |
!! | TGGTATCCATTTTTCTAGCA+AGG | - | chr2_3:63857637-63857656 | Msa0305840:intron | 35.0% |
ATAAGGCCTTGCTAGAAAAA+TGG | + | chr2_3:63857646-63857665 | None:intergenic | 35.0% | |
! | TTTTACAGGCGAGAAATTCA+AGG | - | chr2_3:63857665-63857684 | Msa0305840:intron | 35.0% |
TTTCATTGTCCAACTCTACT+TGG | + | chr2_3:63857698-63857717 | None:intergenic | 35.0% | |
AATCCTGTGTTTGTGTTTGA+GGG | + | chr2_3:63857770-63857789 | None:intergenic | 35.0% | |
TAATCCTGTGTTTGTGTTTG+AGG | + | chr2_3:63857771-63857790 | None:intergenic | 35.0% | |
TCCAAACAAAACCTCTCAAA+CGG | + | chr2_3:63857818-63857837 | None:intergenic | 35.0% | |
AATCCTTGAACTTGAAGAGA+TGG | + | chr2_3:63858025-63858044 | None:intergenic | 35.0% | |
! | CTTCAAGTTCAAGGATTCAA+TGG | - | chr2_3:63858028-63858047 | Msa0305840:intron | 35.0% |
CCAGATCAGAAGTCTTTAAT+GGG | + | chr2_3:63858336-63858355 | None:intergenic | 35.0% | |
CCATTAAAGACTTCTGATCT+GGG | - | chr2_3:63858334-63858353 | Msa0305840:intron | 35.0% | |
CCAAACCTATATGCAAACAA+GGG | + | chr2_3:63858362-63858381 | None:intergenic | 35.0% | |
! | CCTTGTTTGCATATAGGTTT+GGG | - | chr2_3:63858360-63858379 | Msa0305840:intron | 35.0% |
AGGTTGAGAAAATACACCTT+CGG | + | chr2_3:63858598-63858617 | None:intergenic | 35.0% | |
! | ATTTTCTCAACCTGTACAAC+CGG | - | chr2_3:63858605-63858624 | Msa0305840:intron | 35.0% |
GAACATAGATGAGAAATGCT+AGG | + | chr2_3:63858693-63858712 | None:intergenic | 35.0% | |
!! | GATGAGATTTTGACCAAAAG+AGG | - | chr2_3:63858717-63858736 | Msa0305840:intron | 35.0% |
!! | ATTTTGACCAAAAGAGGTAG+AGG | - | chr2_3:63858723-63858742 | Msa0305840:intron | 35.0% |
GATACACATGCATTATTTGG+CGG | - | chr2_3:63858957-63858976 | Msa0305840:intron | 35.0% | |
!! | CTATTATGATAGTGGCCTTA+AGG | + | chr2_3:63859028-63859047 | None:intergenic | 35.0% |
CTTAAGGCCACTATCATAAT+AGG | - | chr2_3:63859026-63859045 | Msa0305840:intron | 35.0% | |
TCCAAACAAAACCTCTCAAA+AGG | + | chr2_3:63857818-63857837 | None:intergenic | 35.0% | |
GTTGAAACCGGTACAAATTA+TGG | + | chr2_3:63859268-63859287 | None:intergenic | 35.0% | |
AATCCTTGAACTTGAAGAGA+TGG | + | chr2_3:63858025-63858044 | None:intergenic | 35.0% | |
AGTAAACAGAACGTTTCTTC+TGG | + | chr2_3:63859422-63859441 | None:intergenic | 35.0% | |
CCTAACTTTCAACTGAAACA+TGG | + | chr2_3:63859614-63859633 | None:intergenic | 35.0% | |
CCATGTTTCAGTTGAAAGTT+AGG | - | chr2_3:63859611-63859630 | Msa0305840:intron | 35.0% | |
CCAGATCAGAAGTCTTTAAT+GGG | + | chr2_3:63858336-63858355 | None:intergenic | 35.0% | |
CCATTAAAGACTTCTGATCT+GGG | - | chr2_3:63858334-63858353 | Msa0305840:intron | 35.0% | |
CCAAACCTATATGCAAACAA+GGG | + | chr2_3:63858362-63858381 | None:intergenic | 35.0% | |
! | CCTTGTTTGCATATAGGTTT+GGG | - | chr2_3:63858360-63858379 | Msa0305840:intron | 35.0% |
AGCATGAGTGTGAGAAATAT+TGG | - | chr2_3:63859844-63859863 | Msa0305840:intron | 35.0% | |
TGAGTGTGAGAAATATTGGA+AGG | - | chr2_3:63859848-63859867 | Msa0305840:intron | 35.0% | |
GAGTGTGAGAAATATTGGAA+GGG | - | chr2_3:63859849-63859868 | Msa0305840:intron | 35.0% | |
AGTGTGAGAAATATTGGAAG+GGG | - | chr2_3:63859850-63859869 | Msa0305840:intron | 35.0% | |
AACCTATACAACCGGTTAAT+AGG | - | chr2_3:63859957-63859976 | Msa0305840:intron | 35.0% | |
TACCTATTAACCGGTTGTAT+AGG | + | chr2_3:63859962-63859981 | None:intergenic | 35.0% | |
GATACACATGCATTATTTGG+CGG | - | chr2_3:63858957-63858976 | Msa0305840:intron | 35.0% | |
TGCTGATAGACTTGAAGATA+CGG | - | chr2_3:63860340-63860359 | Msa0305840:intron | 35.0% | |
!! | TATTAGTGGTTAGCTTGTCA+GGG | + | chr2_3:63860600-63860619 | None:intergenic | 35.0% |
!! | ATATTAGTGGTTAGCTTGTC+AGG | + | chr2_3:63860601-63860620 | None:intergenic | 35.0% |
AATTTAGGAGAGAGACATAG+GGG | + | chr2_3:63860703-63860722 | None:intergenic | 35.0% | |
! | TATGCGACTTTGCATTTTGA+TGG | - | chr2_3:63860748-63860767 | Msa0305840:intron | 35.0% |
AACATGAAGCGAACACTAAA+AGG | + | chr2_3:63861172-63861191 | None:intergenic | 35.0% | |
ACACGATTCTATGGTGTAAT+TGG | + | chr2_3:63861233-63861252 | None:intergenic | 35.0% | |
ATTACACCATAGAATCGTGT+CGG | - | chr2_3:63861233-63861252 | Msa0305840:intron | 35.0% | |
! | TTGATCTTTGACTTTGACCA+AGG | + | chr2_3:63861278-63861297 | None:intergenic | 35.0% |
GTATCATGTAACAGTGTGTT+AGG | + | chr2_3:63861378-63861397 | None:intergenic | 35.0% | |
TAACCATTTACACCAGTTGA+AGG | - | chr2_3:63861406-63861425 | Msa0305840:intron | 35.0% | |
AACCATTTACACCAGTTGAA+GGG | - | chr2_3:63861407-63861426 | Msa0305840:intron | 35.0% | |
! | TGAAGGGAGTTCCATATTTT+TGG | - | chr2_3:63861423-63861442 | Msa0305840:intron | 35.0% |
GTACTATTCAGAAGAAACGA+TGG | - | chr2_3:63861445-63861464 | Msa0305840:intron | 35.0% | |
TCTAGATCTAGATCAGATCA+AGG | - | chr2_3:63861623-63861642 | Msa0305840:intron | 35.0% | |
!!! | ATTTTTGGTCCTGGTATGAA+TGG | - | chr2_3:63861886-63861905 | Msa0305840:intron | 35.0% |
ATTATTGGAAATCATGAGGC+AGG | - | chr2_3:63861977-63861996 | Msa0305840:intron | 35.0% | |
AAGATGCTTATGGATCAACA+AGG | + | chr2_3:63862215-63862234 | None:intergenic | 35.0% | |
!! | TGCTATCATGTTTGCTGTAA+AGG | - | chr2_3:63862341-63862360 | Msa0305840:intron | 35.0% |
!! | AATGGATTCAACTTTTCCAC+AGG | - | chr2_3:63862425-63862444 | Msa0305840:intron | 35.0% |
TTTCCACAGGATATCACAAT+TGG | - | chr2_3:63862438-63862457 | Msa0305840:intron | 35.0% | |
TACCACAAACATCGATATCT+GGG | + | chr2_3:63862484-63862503 | None:intergenic | 35.0% | |
ATACCACAAACATCGATATC+TGG | + | chr2_3:63862485-63862504 | None:intergenic | 35.0% | |
AGATATCGATGTTTGTGGTA+TGG | - | chr2_3:63862484-63862503 | Msa0305840:intron | 35.0% | |
AACTTCTTAAAACGGGATGA+TGG | - | chr2_3:63862629-63862648 | Msa0305840:intron | 35.0% | |
CCAACTTCAACATAGTCATT+TGG | + | chr2_3:63862976-63862995 | None:intergenic | 35.0% | |
CCAAATGACTATGTTGAAGT+TGG | - | chr2_3:63862973-63862992 | Msa0305840:intron | 35.0% | |
AACTTAATCCATTCTCTCAC+TGG | + | chr2_3:63863351-63863370 | None:intergenic | 35.0% | |
TGAATGACATTCACACACAT+TGG | - | chr2_3:63863433-63863452 | Msa0305840:intron | 35.0% | |
TCATTACTTGCTTTCTGCAT+TGG | - | chr2_3:63863506-63863525 | Msa0305840:intron | 35.0% | |
TTCTGCATTGGATATCTCTT+CGG | - | chr2_3:63863518-63863537 | Msa0305840:intron | 35.0% | |
CACTAAACATGCATTCTCAT+GGG | + | chr2_3:63863657-63863676 | None:intergenic | 35.0% | |
ACACTAAACATGCATTCTCA+TGG | + | chr2_3:63863658-63863677 | None:intergenic | 35.0% | |
AAAACCAACATTGATGCTTC+TGG | + | chr2_3:63863799-63863818 | None:intergenic | 35.0% | |
GTCGCAGACATAAATAAAAG+TGG | + | chr2_3:63863968-63863987 | None:intergenic | 35.0% | |
!! | TTGCTTTTATCCTTACAGGA+AGG | - | chr2_3:63864001-63864020 | Msa0305840:intron | 35.0% |
GTCTACATGTACGAAAAAAC+TGG | + | chr2_3:63864083-63864102 | None:intergenic | 35.0% | |
!! | CAGTAAACTCACCACTTTTA+GGG | + | chr2_3:63864105-63864124 | None:intergenic | 35.0% |
!! | TCAGTAAACTCACCACTTTT+AGG | + | chr2_3:63864106-63864125 | None:intergenic | 35.0% |
CATAGTGTAGACTTTATCAC+GGG | - | chr2_3:63864144-63864163 | Msa0305840:intron | 35.0% | |
GAATCAGGAGATAACAAACT+AGG | + | chr2_3:63864233-63864252 | None:intergenic | 35.0% | |
AAGGTGATAAGGAAAGAATC+AGG | + | chr2_3:63864248-63864267 | None:intergenic | 35.0% | |
GCATATCTTGAAAGGTGATA+AGG | + | chr2_3:63864259-63864278 | None:intergenic | 35.0% | |
TGGTATGAACTTTCTGTACT+TGG | - | chr2_3:63864301-63864320 | Msa0305840:intron | 35.0% | |
GTACTTGGATTTAGTCTGTT+AGG | - | chr2_3:63864316-63864335 | Msa0305840:intron | 35.0% | |
CTAAATGTGAACATAGGACA+AGG | + | chr2_3:63864614-63864633 | None:intergenic | 35.0% | |
! | AGAATCGTATCTCCAACTTT+TGG | - | chr2_3:63864650-63864669 | Msa0305840:CDS | 35.0% |
TTTGGGGAACAAATTTCCAT+AGG | + | chr2_3:63864718-63864737 | None:intergenic | 35.0% | |
!! | TGCGTTGGTGTTAATCATTT+AGG | - | chr2_3:63864789-63864808 | Msa0305840:CDS | 35.0% |
!! | GCGTTGGTGTTAATCATTTA+GGG | - | chr2_3:63864790-63864809 | Msa0305840:CDS | 35.0% |
AACTTACGTTCCGATAAGTT+GGG | + | chr2_3:63864843-63864862 | None:intergenic | 35.0% | |
! | AATGATGGAAATTGCTGAAG+AGG | + | chr2_3:63864899-63864918 | None:intergenic | 35.0% |
TAGGCCTTAATAGTAAAGAC+AGG | - | chr2_3:63864919-63864938 | Msa0305840:intron | 35.0% | |
! | ATGAATGGTAGTTCTACTTG+AGG | - | chr2_3:63865064-63865083 | Msa0305840:CDS | 35.0% |
TGAAACCATGAAGTGATCAA+GGG | - | chr2_3:63865302-63865321 | Msa0305840:intron | 35.0% | |
GAAGGTGAAGTTGAACTGAA+AGG | + | chr2_3:63856576-63856595 | None:intergenic | 40.0% | |
GTAGCAGTATTAGCAGATGA+AGG | + | chr2_3:63856594-63856613 | None:intergenic | 40.0% | |
AGGGAATGGTTGAAGAAAGA+AGG | + | chr2_3:63856702-63856721 | None:intergenic | 40.0% | |
AGAGAAATAGTGCAGGAAGA+TGG | + | chr2_3:63856805-63856824 | None:intergenic | 40.0% | |
! | ATCTTCCTGCACTATTTCTC+TGG | - | chr2_3:63856804-63856823 | Msa0305840:three_prime_UTR | 40.0% |
!! | GTCTTTTCCTTCGCCTTATT+GGG | - | chr2_3:63856843-63856862 | Msa0305840:three_prime_UTR | 40.0% |
CAAAGGAGCAATACCCAATA+AGG | + | chr2_3:63856859-63856878 | None:intergenic | 40.0% | |
! | CTTATTGGGTATTGCTCCTT+TGG | - | chr2_3:63856857-63856876 | Msa0305840:three_prime_UTR | 40.0% |
TTAAGTAAACCCCCAAGTGT+TGG | + | chr2_3:63856930-63856949 | None:intergenic | 40.0% | |
TCCAATATGCTTCTTGTCCT+TGG | - | chr2_3:63857050-63857069 | Msa0305840:intron | 40.0% | |
! | TCCAAGGACAAGAAGCATAT+TGG | + | chr2_3:63857054-63857073 | None:intergenic | 40.0% |
CAGTAAAGAATGCACATCCA+AGG | + | chr2_3:63857070-63857089 | None:intergenic | 40.0% | |
CTTGGATGTGCATTCTTTAC+TGG | - | chr2_3:63857068-63857087 | Msa0305840:intron | 40.0% | |
GATGTGCATTCTTTACTGGT+GGG | - | chr2_3:63857072-63857091 | Msa0305840:intron | 40.0% | |
!! | GTTGTTGTTGATGGCTGTAA+TGG | - | chr2_3:63857222-63857241 | Msa0305840:intron | 40.0% |
!!! | CTAGCAAGGCCTTATTTTAC+AGG | - | chr2_3:63857651-63857670 | Msa0305840:intron | 40.0% |
GTTGAAACCGGTACAAGTTA+TGG | + | chr2_3:63857928-63857947 | None:intergenic | 40.0% | |
!! | CTTTTCCAGTTTAAGACGGA+AGG | - | chr2_3:63858179-63858198 | Msa0305840:intron | 40.0% |
TGAGGACGAAAAATCTGATC+CGG | - | chr2_3:63858202-63858221 | Msa0305840:intron | 40.0% | |
CCCATTAAAGACTTCTGATC+TGG | - | chr2_3:63858333-63858352 | Msa0305840:intron | 40.0% | |
CCCAGATCAGAAGTCTTTAA+TGG | + | chr2_3:63858337-63858356 | None:intergenic | 40.0% | |
! | CCCTTGTTTGCATATAGGTT+TGG | - | chr2_3:63858359-63858378 | Msa0305840:intron | 40.0% |
CCCAAACCTATATGCAAACA+AGG | + | chr2_3:63858363-63858382 | None:intergenic | 40.0% | |
TTGTCTCTGTCAAGCTCTTA+TGG | + | chr2_3:63858477-63858496 | None:intergenic | 40.0% | |
TAAGAGCTTGACAGAGACAA+CGG | - | chr2_3:63858477-63858496 | Msa0305840:intron | 40.0% | |
TGAGTGTGAGAAACATTGGA+AGG | - | chr2_3:63858505-63858524 | Msa0305840:intron | 40.0% | |
GAGTGTGAGAAACATTGGAA+GGG | - | chr2_3:63858506-63858525 | Msa0305840:intron | 40.0% | |
AGTGTGAGAAACATTGGAAG+GGG | - | chr2_3:63858507-63858526 | Msa0305840:intron | 40.0% | |
GGTTGAGAAAATACACCTTC+GGG | + | chr2_3:63858597-63858616 | None:intergenic | 40.0% | |
AACCTGTACAACCGGTTAAT+AGG | - | chr2_3:63858613-63858632 | Msa0305840:intron | 40.0% | |
TACCTATTAACCGGTTGTAC+AGG | + | chr2_3:63858618-63858637 | None:intergenic | 40.0% | |
! | ATGTCTTCCTCTACCTCTTT+TGG | + | chr2_3:63858733-63858752 | None:intergenic | 40.0% |
GAAGATAAGGGGAAACCTTA+AGG | - | chr2_3:63859010-63859029 | Msa0305840:intron | 40.0% | |
! | AGTTAAGGATGCCTTTTGAG+AGG | - | chr2_3:63859144-63859163 | Msa0305840:intron | 40.0% |
!!! | GCCTTTTGAGAGGTTTTGTT+TGG | - | chr2_3:63859154-63859173 | Msa0305840:intron | 40.0% |
CCTCACCTTCTCTCTTAAAT+TGG | + | chr2_3:63859535-63859554 | None:intergenic | 40.0% | |
CCAATTTAAGAGAGAAGGTG+AGG | - | chr2_3:63859532-63859551 | Msa0305840:intron | 40.0% | |
TTTAAGAGAGAAGGTGAGGA+CGG | - | chr2_3:63859536-63859555 | Msa0305840:intron | 40.0% | |
CCCATTAAAGACTTCTGATC+TGG | - | chr2_3:63858333-63858352 | Msa0305840:intron | 40.0% | |
CCCAGATCAGAAGTCTTTAA+TGG | + | chr2_3:63858337-63858356 | None:intergenic | 40.0% | |
! | CCCTTGTTTGCATATAGGTT+TGG | - | chr2_3:63858359-63858378 | Msa0305840:intron | 40.0% |
CCCAAACCTATATGCAAACA+AGG | + | chr2_3:63858363-63858382 | None:intergenic | 40.0% | |
TTGTCTCTGTCAAGCTCTTA+TGG | + | chr2_3:63858477-63858496 | None:intergenic | 40.0% | |
TAAGAGCTTGACAGAGACAA+TGG | - | chr2_3:63858477-63858496 | Msa0305840:intron | 40.0% | |
CTCATCACTCTCAAATTCCA+TGG | + | chr2_3:63859876-63859895 | None:intergenic | 40.0% | |
ATGATGTGGCGAATTCTAAC+TGG | - | chr2_3:63860000-63860019 | Msa0305840:intron | 40.0% | |
GATGAGAGTTTGACCAAAAG+AGG | - | chr2_3:63860066-63860085 | Msa0305840:intron | 40.0% | |
AGTTTGACCAAAAGAGGTAG+AGG | - | chr2_3:63860072-63860091 | Msa0305840:intron | 40.0% | |
! | AAGCCTTATACCACTAAGTG+GGG | + | chr2_3:63860212-63860231 | None:intergenic | 40.0% |
! | CAAGCCTTATACCACTAAGT+GGG | + | chr2_3:63860213-63860232 | None:intergenic | 40.0% |
GCTGATAGACTTGAAGATAC+GGG | - | chr2_3:63860341-63860360 | Msa0305840:intron | 40.0% | |
CTGATAGACTTGAAGATACG+GGG | - | chr2_3:63860342-63860361 | Msa0305840:intron | 40.0% | |
! | GTATGGGTTTGGGATATTGA+AGG | - | chr2_3:63860533-63860552 | Msa0305840:intron | 40.0% |
!! | ATTAGTGGTTAGCTTGTCAG+GGG | + | chr2_3:63860599-63860618 | None:intergenic | 40.0% |
TGCAAGTGAATTTGTGCCTA+TGG | - | chr2_3:63860870-63860889 | Msa0305840:intron | 40.0% | |
AGAGAAAAATGGCATGCCAT+AGG | + | chr2_3:63860889-63860908 | None:intergenic | 40.0% | |
TACAAGTGAAAACTCTGACG+AGG | - | chr2_3:63860963-63860982 | Msa0305840:intron | 40.0% | |
CTCAATCGGAAGCGATAATT+TGG | - | chr2_3:63861004-63861023 | Msa0305840:CDS | 40.0% | |
!! | GCTTGCAATTTTGACGGTAT+GGG | - | chr2_3:63861026-63861045 | Msa0305840:CDS | 40.0% |
ACTGTACAGCTATACCTCTA+TGG | + | chr2_3:63861082-63861101 | None:intergenic | 40.0% | |
CAATGTCTATGGGTTTACCT+TGG | - | chr2_3:63861258-63861277 | Msa0305840:intron | 40.0% | |
AATATGGAACTCCCTTCAAC+TGG | + | chr2_3:63861421-63861440 | None:intergenic | 40.0% | |
TTCAGAAGAAACGATGGGAT+TGG | - | chr2_3:63861451-63861470 | Msa0305840:intron | 40.0% | |
ACGAGTCGAAATACAATGTG+TGG | + | chr2_3:63861774-63861793 | None:intergenic | 40.0% | |
!! | GTTGTTGGTTAAGCTGCTTT+TGG | - | chr2_3:63861805-63861824 | Msa0305840:intron | 40.0% |
AAAAGGCTGATAAGGAGAAG+AGG | + | chr2_3:63861866-63861885 | None:intergenic | 40.0% | |
!!! | CAGCCTTTTATTTTTGGTCC+TGG | - | chr2_3:63861877-63861896 | Msa0305840:intron | 40.0% |
! | TTTTATAGCATGGGCCAATG+TGG | + | chr2_3:63861951-63861970 | None:intergenic | 40.0% |
AGGAAATATGGAAACAGAGG+AGG | - | chr2_3:63862017-63862036 | Msa0305840:intron | 40.0% | |
AATATGGAAACAGAGGAGGA+AGG | - | chr2_3:63862021-63862040 | Msa0305840:intron | 40.0% | |
ATATGGAAACAGAGGAGGAA+GGG | - | chr2_3:63862022-63862041 | Msa0305840:intron | 40.0% | |
TTTGGGTGGGTAAGGTTTAT+GGG | + | chr2_3:63862075-63862094 | None:intergenic | 40.0% | |
!! | TTTTGGGTGGGTAAGGTTTA+TGG | + | chr2_3:63862076-63862095 | None:intergenic | 40.0% |
TTACCCACCCAAAAACTACA+CGG | - | chr2_3:63862082-63862101 | Msa0305840:intron | 40.0% | |
! | TCTGTTGCCGTGTAGTTTTT+GGG | + | chr2_3:63862092-63862111 | None:intergenic | 40.0% |
! | TTCTGTTGCCGTGTAGTTTT+TGG | + | chr2_3:63862093-63862112 | None:intergenic | 40.0% |
GGAGTTCTTCATTGTCAACA+AGG | + | chr2_3:63862194-63862213 | None:intergenic | 40.0% | |
CCAGAAACACAAGATGCTTA+TGG | + | chr2_3:63862225-63862244 | None:intergenic | 40.0% | |
CCATAAGCATCTTGTGTTTC+TGG | - | chr2_3:63862222-63862241 | Msa0305840:intron | 40.0% | |
!! | TTGTGTTTCTGGTCTATTGC+AGG | - | chr2_3:63862233-63862252 | Msa0305840:intron | 40.0% |
!! | TGTGTTTCTGGTCTATTGCA+GGG | - | chr2_3:63862234-63862253 | Msa0305840:intron | 40.0% |
GTCATCTTGCTTCCAATTGT+AGG | - | chr2_3:63862297-63862316 | Msa0305840:intron | 40.0% | |
GTAAAGGACAAGCTAGTAAG+TGG | - | chr2_3:63862357-63862376 | Msa0305840:intron | 40.0% | |
ACTCCAATTGTGATATCCTG+TGG | + | chr2_3:63862444-63862463 | None:intergenic | 40.0% | |
ATCACAATTGGAGTTGCTGT+TGG | - | chr2_3:63862450-63862469 | Msa0305840:intron | 40.0% | |
AACCCAGATATCGATGTTTG+TGG | - | chr2_3:63862479-63862498 | Msa0305840:intron | 40.0% | |
TGAGATGGATAAATACAGGC+CGG | + | chr2_3:63862582-63862601 | None:intergenic | 40.0% | |
CCTGTGAGATGGATAAATAC+AGG | + | chr2_3:63862586-63862605 | None:intergenic | 40.0% | |
CCTGTATTTATCCATCTCAC+AGG | - | chr2_3:63862583-63862602 | Msa0305840:intron | 40.0% | |
! | TGAGACATTTTCCTGTGAGA+TGG | + | chr2_3:63862597-63862616 | None:intergenic | 40.0% |
! | TAAAACGGGATGATGGTTGT+TGG | - | chr2_3:63862636-63862655 | Msa0305840:intron | 40.0% |
ATGGTGCATGGGAAAAGAAA+TGG | - | chr2_3:63862718-63862737 | Msa0305840:intron | 40.0% | |
GGTAGTTGCATTTATGATGC+AGG | - | chr2_3:63862790-63862809 | Msa0305840:intron | 40.0% | |
TCCATAATCCAGTGAGAGAA+TGG | - | chr2_3:63863340-63863359 | Msa0305840:intron | 40.0% | |
TCCATTCTCTCACTGGATTA+TGG | + | chr2_3:63863344-63863363 | None:intergenic | 40.0% | |
TTTCTCACTCTTCGTTGTCA+AGG | - | chr2_3:63863852-63863871 | Msa0305840:intron | 40.0% | |
TTCTCACTCTTCGTTGTCAA+GGG | - | chr2_3:63863853-63863872 | Msa0305840:intron | 40.0% | |
! | ATTTGAGGTTCCTTCCTGTA+AGG | + | chr2_3:63864014-63864033 | None:intergenic | 40.0% |
GTACATGTAGACCCTAAAAG+TGG | - | chr2_3:63864091-63864110 | Msa0305840:intron | 40.0% | |
ACAAGCAAGAACTAGCAGAA+AGG | - | chr2_3:63864416-63864435 | Msa0305840:intron | 40.0% | |
AGAACTAGCAGAAAGGAACA+AGG | - | chr2_3:63864423-63864442 | Msa0305840:intron | 40.0% | |
GAACTAGCAGAAAGGAACAA+GGG | - | chr2_3:63864424-63864443 | Msa0305840:intron | 40.0% | |
AATGTGAACATAGGACAAGG+AGG | + | chr2_3:63864611-63864630 | None:intergenic | 40.0% | |
! | ATCTCCAACTTTTGGTAGAC+TGG | - | chr2_3:63864658-63864677 | Msa0305840:CDS | 40.0% |
GGAACAAATTTCCATAGGCA+TGG | + | chr2_3:63864713-63864732 | None:intergenic | 40.0% | |
! | TCATATAGGAGCACGGATTT+GGG | + | chr2_3:63864735-63864754 | None:intergenic | 40.0% |
! | ATCATATAGGAGCACGGATT+TGG | + | chr2_3:63864736-63864755 | None:intergenic | 40.0% |
! | TCCGATAAGTTGGGCAATTT+GGG | + | chr2_3:63864834-63864853 | None:intergenic | 40.0% |
! | TTCCGATAAGTTGGGCAATT+TGG | + | chr2_3:63864835-63864854 | None:intergenic | 40.0% |
GAACTTACGTTCCGATAAGT+TGG | + | chr2_3:63864844-63864863 | None:intergenic | 40.0% | |
ACTTATCGGAACGTAAGTTC+TGG | - | chr2_3:63864844-63864863 | Msa0305840:intron | 40.0% | |
TAGTGTATTCCTAAGCTAGG+CGG | - | chr2_3:63864962-63864981 | Msa0305840:CDS | 40.0% | |
ACAGTATCAAAAACGTGGAC+CGG | + | chr2_3:63865015-63865034 | None:intergenic | 40.0% | |
GTGAAACCATGAAGTGATCA+AGG | - | chr2_3:63865301-63865320 | Msa0305840:intron | 40.0% | |
! | GATTGGTTACTTTGCCGAAA+AGG | + | chr2_3:63865451-63865470 | None:intergenic | 40.0% |
TGTATCTGCTGGTGACAAGA+TGG | - | chr2_3:63856527-63856546 | Msa0305840:three_prime_UTR | 45.0% | |
!! | TTTGCTGATTCGTCTGGTGA+GGG | + | chr2_3:63856721-63856740 | None:intergenic | 45.0% |
!!! | TTTTGCTGATTCGTCTGGTG+AGG | + | chr2_3:63856722-63856741 | None:intergenic | 45.0% |
CTTACTACCCTTTGGTCCTT+TGG | - | chr2_3:63856779-63856798 | Msa0305840:three_prime_UTR | 45.0% | |
AAGATGGCCAAAGGACCAAA+GGG | + | chr2_3:63856789-63856808 | None:intergenic | 45.0% | |
! | TTCCTGCACTATTTCTCTGG+CGG | - | chr2_3:63856807-63856826 | Msa0305840:three_prime_UTR | 45.0% |
TCTCTGGCGGAAAACATGTT+TGG | - | chr2_3:63856820-63856839 | Msa0305840:three_prime_UTR | 45.0% | |
CTCTGGCGGAAAACATGTTT+GGG | - | chr2_3:63856821-63856840 | Msa0305840:three_prime_UTR | 45.0% | |
! | GGTCTTTTCCTTCGCCTTAT+TGG | - | chr2_3:63856842-63856861 | Msa0305840:three_prime_UTR | 45.0% |
AGCAATACCCAATAAGGCGA+AGG | + | chr2_3:63856853-63856872 | None:intergenic | 45.0% | |
TAACCTAGACGTTCAGCCAA+AGG | + | chr2_3:63856876-63856895 | None:intergenic | 45.0% | |
GGTGTAGAAAGCAAGTTGCT+CGG | + | chr2_3:63856904-63856923 | None:intergenic | 45.0% | |
! | GAGCAACTTGCTTTCTACAC+CGG | - | chr2_3:63856903-63856922 | Msa0305840:intron | 45.0% |
GGATGTGCATTCTTTACTGG+TGG | - | chr2_3:63857071-63857090 | Msa0305840:intron | 45.0% | |
GAGAAGTCTGTGAGTAAGCA+TGG | + | chr2_3:63857169-63857188 | None:intergenic | 45.0% | |
CACAGACTTCTCTTTCCTAC+AGG | - | chr2_3:63857177-63857196 | Msa0305840:intron | 45.0% | |
! | CAACTCAGGGTTGTTGTTGA+TGG | - | chr2_3:63857213-63857232 | Msa0305840:intron | 45.0% |
GGAGTGAGTGAAATGAAGCA+CGG | + | chr2_3:63857263-63857282 | None:intergenic | 45.0% | |
ACTCACTCCGAAGTTCATCT+TGG | - | chr2_3:63857274-63857293 | Msa0305840:intron | 45.0% | |
CTCACTCCGAAGTTCATCTT+GGG | - | chr2_3:63857275-63857294 | Msa0305840:intron | 45.0% | |
GGACTTCCCAAGATGAACTT+CGG | + | chr2_3:63857284-63857303 | None:intergenic | 45.0% | |
TAGCAGCTGCATAATGCTAG+TGG | - | chr2_3:63857324-63857343 | Msa0305840:intron | 45.0% | |
AAAGAAGGAACCTGGTCAAC+TGG | + | chr2_3:63857403-63857422 | None:intergenic | 45.0% | |
ATGTGGCAAAAGAAGGAACC+TGG | + | chr2_3:63857411-63857430 | None:intergenic | 45.0% | |
! | ACTTCGTGTTGACGTACTTG+AGG | - | chr2_3:63857479-63857498 | Msa0305840:intron | 45.0% |
! | AACAAGCGTTGCGCATTTAC+TGG | - | chr2_3:63857617-63857636 | Msa0305840:intron | 45.0% |
GGTACAAGTCCAAGTAGAGT+TGG | - | chr2_3:63857686-63857705 | Msa0305840:intron | 45.0% | |
! | AGTTAAGGATGCCGTTTGAG+AGG | - | chr2_3:63857804-63857823 | Msa0305840:intron | 45.0% |
!!! | GCCGTTTGAGAGGTTTTGTT+TGG | - | chr2_3:63857814-63857833 | Msa0305840:intron | 45.0% |
GAACTTGAAGAGATGGAGGT+GGG | + | chr2_3:63858018-63858037 | None:intergenic | 45.0% | |
TGAACTTGAAGAGATGGAGG+TGG | + | chr2_3:63858019-63858038 | None:intergenic | 45.0% | |
CCTTGAACTTGAAGAGATGG+AGG | + | chr2_3:63858022-63858041 | None:intergenic | 45.0% | |
! | CCTCCATCTCTTCAAGTTCA+AGG | - | chr2_3:63858019-63858038 | Msa0305840:intron | 45.0% |
! | GGGTACCCTTGTTTGCATAT+AGG | - | chr2_3:63858354-63858373 | Msa0305840:intron | 45.0% |
GGCATGAGTGTGAGAAACAT+TGG | - | chr2_3:63858501-63858520 | Msa0305840:intron | 45.0% | |
AGAAACATTGGAAGGGGCTA+TGG | - | chr2_3:63858513-63858532 | Msa0305840:intron | 45.0% | |
TTGGAAGGGGCTATGGAATT+TGG | - | chr2_3:63858520-63858539 | Msa0305840:intron | 45.0% | |
TGGAAGGGGCTATGGAATTT+GGG | - | chr2_3:63858521-63858540 | Msa0305840:intron | 45.0% | |
AGTGCGGATAAATTTCCCGA+AGG | - | chr2_3:63858579-63858598 | Msa0305840:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | + | chr2_3:63858863-63858882 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | + | chr2_3:63858864-63858883 | None:intergenic | 45.0% |
! | CTTTGTTTGTGTTTGAGGGC+AGG | + | chr2_3:63859106-63859125 | None:intergenic | 45.0% |
CTGCCCTCAAACACAAACAA+AGG | - | chr2_3:63859104-63859123 | Msa0305840:intron | 45.0% | |
! | GAACTTGAAGAGATGGTGGT+GGG | + | chr2_3:63859358-63859377 | None:intergenic | 45.0% |
! | TGAACTTGAAGAGATGGTGG+TGG | + | chr2_3:63859359-63859378 | None:intergenic | 45.0% |
CCTTGAACTTGAAGAGATGG+TGG | + | chr2_3:63858022-63858041 | None:intergenic | 45.0% | |
! | CCACCATCTCTTCAAGTTCA+AGG | - | chr2_3:63859359-63859378 | Msa0305840:intron | 45.0% |
! | GGGTACCCTTGTTTGCATAT+AGG | - | chr2_3:63858354-63858373 | Msa0305840:intron | 45.0% |
AGAAATATTGGAAGGGGCCA+TGG | - | chr2_3:63859856-63859875 | Msa0305840:intron | 45.0% | |
! | ACGTCTTCCTCTACCTCTTT+TGG | + | chr2_3:63860082-63860101 | None:intergenic | 45.0% |
TGACCCCACTTAGTGGTATA+AGG | - | chr2_3:63860206-63860225 | Msa0305840:intron | 45.0% | |
! | CCAAGCCTTATACCACTAAG+TGG | + | chr2_3:63860214-63860233 | None:intergenic | 45.0% |
CCACTTAGTGGTATAAGGCT+TGG | - | chr2_3:63860211-63860230 | Msa0305840:intron | 45.0% | |
GAAGATACGGGGAAACCTTA+AGG | - | chr2_3:63860353-63860372 | Msa0305840:intron | 45.0% | |
! | TTCCTGAAAGTGTAGCCCAA+CGG | - | chr2_3:63860511-63860530 | Msa0305840:intron | 45.0% |
AAAGTGTAGCCCAACGGTAT+GGG | - | chr2_3:63860517-63860536 | Msa0305840:intron | 45.0% | |
TATCCCAAACCCATACCGTT+GGG | + | chr2_3:63860529-63860548 | None:intergenic | 45.0% | |
ATATCCCAAACCCATACCGT+TGG | + | chr2_3:63860530-63860549 | None:intergenic | 45.0% | |
! | TGGGTTTGGGATATTGAAGG+AGG | - | chr2_3:63860536-63860555 | Msa0305840:intron | 45.0% |
TGGCAGCAATGATAAAACCC+TGG | + | chr2_3:63860563-63860582 | None:intergenic | 45.0% | |
! | TTGATGGATGTCAGTGTGAG+TGG | - | chr2_3:63860764-63860783 | Msa0305840:intron | 45.0% |
AAGTGAAAACTCTGACGAGG+AGG | - | chr2_3:63860966-63860985 | Msa0305840:intron | 45.0% | |
!! | GGCTTGCAATTTTGACGGTA+TGG | - | chr2_3:63861025-63861044 | Msa0305840:CDS | 45.0% |
GTATGGGTATCAGTGTTGTC+TGG | - | chr2_3:63861042-63861061 | Msa0305840:CDS | 45.0% | |
AGTGTTGTCTGGATACCTTG+TGG | - | chr2_3:63861053-63861072 | Msa0305840:CDS | 45.0% | |
ATACCTTGTGGATGCCATAG+AGG | - | chr2_3:63861065-63861084 | Msa0305840:CDS | 45.0% | |
ATACCTCTATGGCATCCACA+AGG | + | chr2_3:63861071-63861090 | None:intergenic | 45.0% | |
! | ATTGCACCGACACGATTCTA+TGG | + | chr2_3:63861242-63861261 | None:intergenic | 45.0% |
TGTGTTAGGTGATGTTGAGC+TGG | + | chr2_3:63861364-63861383 | None:intergenic | 45.0% | |
CTCCCTTCAACTGGTGTAAA+TGG | + | chr2_3:63861412-63861431 | None:intergenic | 45.0% | |
! | TTGGGTGAAATAGTGGAGAG+TGG | - | chr2_3:63861522-63861541 | Msa0305840:intron | 45.0% |
!!! | GTGTAGTTTTTGGGTGGGTA+AGG | + | chr2_3:63862083-63862102 | None:intergenic | 45.0% |
!!! | TTGCCGTGTAGTTTTTGGGT+GGG | + | chr2_3:63862088-63862107 | None:intergenic | 45.0% |
TCTGCGGCATTTCCTACAAT+TGG | + | chr2_3:63862312-63862331 | None:intergenic | 45.0% | |
TTTGTAGATCCCCTTCTGTG+TGG | - | chr2_3:63862688-63862707 | Msa0305840:intron | 45.0% | |
ATCCAACAACCACACAGAAG+GGG | + | chr2_3:63862700-63862719 | None:intergenic | 45.0% | |
CATCCAACAACCACACAGAA+GGG | + | chr2_3:63862701-63862720 | None:intergenic | 45.0% | |
CAGCACAGTGATAAAAAGCG+TGG | + | chr2_3:63862771-63862790 | None:intergenic | 45.0% | |
!! | CACGCTTTTTATCACTGTGC+TGG | - | chr2_3:63862769-63862788 | Msa0305840:intron | 45.0% |
TTGTTAGTCCCACATCGCTT+GGG | - | chr2_3:63863018-63863037 | Msa0305840:intron | 45.0% | |
AAAGCTAGCTCAAAGGAGGA+GGG | + | chr2_3:63863080-63863099 | None:intergenic | 45.0% | |
AAAAGCTAGCTCAAAGGAGG+AGG | + | chr2_3:63863081-63863100 | None:intergenic | 45.0% | |
!!! | TCCTCCTTTGAGCTAGCTTT+TGG | - | chr2_3:63863080-63863099 | Msa0305840:intron | 45.0% |
!!! | CCTCCTTTGAGCTAGCTTTT+GGG | - | chr2_3:63863081-63863100 | Msa0305840:intron | 45.0% |
CATCCCAAAAGCTAGCTCAA+AGG | + | chr2_3:63863087-63863106 | None:intergenic | 45.0% | |
! | ATGTGCATAGAGAGGGCATA+AGG | + | chr2_3:63863386-63863405 | None:intergenic | 45.0% |
CTAACGCATGTGCATAGAGA+GGG | + | chr2_3:63863393-63863412 | None:intergenic | 45.0% | |
TCTAACGCATGTGCATAGAG+AGG | + | chr2_3:63863394-63863413 | None:intergenic | 45.0% | |
!! | GTGTCCAGAAGCATCAATGT+TGG | - | chr2_3:63863792-63863811 | Msa0305840:intron | 45.0% |
TGAACATAGGACAAGGAGGA+GGG | + | chr2_3:63864607-63864626 | None:intergenic | 45.0% | |
! | TCCAACTTTTGGTAGACTGG+AGG | - | chr2_3:63864661-63864680 | Msa0305840:CDS | 45.0% |
ACCTCCAGTCTACCAAAAGT+TGG | + | chr2_3:63864665-63864684 | None:intergenic | 45.0% | |
ATTTCCATAGGCATGGTGCA+TGG | + | chr2_3:63864706-63864725 | None:intergenic | 45.0% | |
! | CATATAGGAGCACGGATTTG+GGG | + | chr2_3:63864734-63864753 | None:intergenic | 45.0% |
! | ATTTAGGGTTCTCACTGTGC+AGG | - | chr2_3:63864805-63864824 | Msa0305840:CDS | 45.0% |
! | GATAAGTTGGGCAATTTGGG+GGG | + | chr2_3:63864831-63864850 | None:intergenic | 45.0% |
! | CGATAAGTTGGGCAATTTGG+GGG | + | chr2_3:63864832-63864851 | None:intergenic | 45.0% |
! | CCGATAAGTTGGGCAATTTG+GGG | + | chr2_3:63864833-63864852 | None:intergenic | 45.0% |
CCCCAAATTGCCCAACTTAT+CGG | - | chr2_3:63864830-63864849 | Msa0305840:CDS | 45.0% | |
GTGATGACTAAATAGCGTGC+TGG | - | chr2_3:63865150-63865169 | Msa0305840:intron | 45.0% | |
CCATGTTGAATGCTGAAAGC+AGG | + | chr2_3:63865278-63865297 | None:intergenic | 45.0% | |
CCTGCTTTCAGCATTCAACA+TGG | - | chr2_3:63865275-63865294 | Msa0305840:intron | 45.0% | |
CATTGCCCTTGATCACTTCA+TGG | + | chr2_3:63865310-63865329 | None:intergenic | 45.0% | |
TGATTCGTCTGGTGAGGGAA+TGG | + | chr2_3:63856716-63856735 | None:intergenic | 50.0% | |
GAAGATGGCCAAAGGACCAA+AGG | + | chr2_3:63856790-63856809 | None:intergenic | 50.0% | |
TAGTGCAGGAAGATGGCCAA+AGG | + | chr2_3:63856798-63856817 | None:intergenic | 50.0% | |
TTCCGCCAGAGAAATAGTGC+AGG | + | chr2_3:63856812-63856831 | None:intergenic | 50.0% | |
TTCTACACCGGACCAACACT+TGG | - | chr2_3:63856915-63856934 | Msa0305840:intron | 50.0% | |
TCTACACCGGACCAACACTT+GGG | - | chr2_3:63856916-63856935 | Msa0305840:intron | 50.0% | |
!! | TAAACCCCCAAGTGTTGGTC+CGG | + | chr2_3:63856925-63856944 | None:intergenic | 50.0% |
CAGCTGCTGTTGTCAACTCA+GGG | - | chr2_3:63857200-63857219 | Msa0305840:intron | 50.0% | |
TGAGTGAAATGAAGCACGGC+GGG | + | chr2_3:63857259-63857278 | None:intergenic | 50.0% | |
GTGAGTGAAATGAAGCACGG+CGG | + | chr2_3:63857260-63857279 | None:intergenic | 50.0% | |
! | CGCAACGCTTGTTAACACAC+AGG | + | chr2_3:63857610-63857629 | None:intergenic | 50.0% |
CTGTGTTTGTGTTTGAGGGC+AGG | + | chr2_3:63857766-63857785 | None:intergenic | 50.0% | |
CTGCCCTCAAACACAAACAC+AGG | - | chr2_3:63857764-63857783 | Msa0305840:intron | 50.0% | |
CCTCACCTTCCGTCTTAAAC+TGG | + | chr2_3:63858187-63858206 | None:intergenic | 50.0% | |
! | CCAGTTTAAGACGGAAGGTG+AGG | - | chr2_3:63858184-63858203 | Msa0305840:intron | 50.0% |
GGACGAAAAATCTGATCCGG+CGG | - | chr2_3:63858205-63858224 | Msa0305840:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | + | chr2_3:63858859-63858878 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | + | chr2_3:63858865-63858884 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | - | chr2_3:63858862-63858881 | Msa0305840:intron | 50.0% | |
TGTTTGTGTTTGAGGGCAGG+TGG | + | chr2_3:63857763-63857782 | None:intergenic | 50.0% | |
GAAGGTGAGGACGGAAAATC+TGG | - | chr2_3:63859545-63859564 | Msa0305840:intron | 50.0% | |
ATGTAGCTGACCCCACTTAG+TGG | - | chr2_3:63860199-63860218 | Msa0305840:intron | 50.0% | |
TACCGTTGGGCTACACTTTC+AGG | + | chr2_3:63860516-63860535 | None:intergenic | 50.0% | |
! | GAAAGTGTAGCCCAACGGTA+TGG | - | chr2_3:63860516-63860535 | Msa0305840:intron | 50.0% |
TAGCCCAACGGTATGGGTTT+GGG | - | chr2_3:63860523-63860542 | Msa0305840:intron | 50.0% | |
TGGGATATTGAAGGAGGTCC+AGG | - | chr2_3:63860542-63860561 | Msa0305840:intron | 50.0% | |
GGGATATTGAAGGAGGTCCA+GGG | - | chr2_3:63860543-63860562 | Msa0305840:intron | 50.0% | |
TCAGGGGAAGGGCAAATTGT+TGG | + | chr2_3:63860583-63860602 | None:intergenic | 50.0% | |
!! | TGGTTAGCTTGTCAGGGGAA+GGG | + | chr2_3:63860594-63860613 | None:intergenic | 50.0% |
TAGGAGAGAGACATAGGGGT+TGG | + | chr2_3:63860699-63860718 | None:intergenic | 50.0% | |
! | TCGTGTCGGTGCAATGTCTA+TGG | - | chr2_3:63861247-63861266 | Msa0305840:intron | 50.0% |
! | CGTGTCGGTGCAATGTCTAT+GGG | - | chr2_3:63861248-63861267 | Msa0305840:intron | 50.0% |
! | GATCAAGGACTAGCAGCTCT+AGG | - | chr2_3:63861638-63861657 | Msa0305840:intron | 50.0% |
! | GTCCTGGTATGAATGGACTC+TGG | - | chr2_3:63861893-63861912 | Msa0305840:intron | 50.0% |
GTCCAGAGTCCATTCATACC+AGG | + | chr2_3:63861898-63861917 | None:intergenic | 50.0% | |
AACTCCTGCCACATCCACAT+TGG | - | chr2_3:63861934-63861953 | Msa0305840:intron | 50.0% | |
GTGGGTAAGGTTTATGGGCA+AGG | + | chr2_3:63862070-63862089 | None:intergenic | 50.0% | |
!! | GTTGCCGTGTAGTTTTTGGG+TGG | + | chr2_3:63862089-63862108 | None:intergenic | 50.0% |
GATAGCACTTGCATGCTCTG+CGG | + | chr2_3:63862328-63862347 | None:intergenic | 50.0% | |
ATCCCCTTCTGTGTGGTTGT+TGG | - | chr2_3:63862695-63862714 | Msa0305840:intron | 50.0% | |
CCATCCAACAACCACACAGA+AGG | + | chr2_3:63862702-63862721 | None:intergenic | 50.0% | |
CCTTCTGTGTGGTTGTTGGA+TGG | - | chr2_3:63862699-63862718 | Msa0305840:intron | 50.0% | |
TGTGGTTGTTGGATGGTGCA+TGG | - | chr2_3:63862706-63862725 | Msa0305840:intron | 50.0% | |
GTGGTTGTTGGATGGTGCAT+GGG | - | chr2_3:63862707-63862726 | Msa0305840:intron | 50.0% | |
GCGTGGCAGTCTCAAAAAGT+TGG | + | chr2_3:63862754-63862773 | None:intergenic | 50.0% | |
GTTGTTAGTCCCACATCGCT+TGG | - | chr2_3:63863017-63863036 | Msa0305840:intron | 50.0% | |
CCCAAAAGCTAGCTCAAAGG+AGG | + | chr2_3:63863084-63863103 | None:intergenic | 50.0% | |
AACATAGGACAAGGAGGAGG+GGG | + | chr2_3:63864605-63864624 | None:intergenic | 50.0% | |
GAACATAGGACAAGGAGGAG+GGG | + | chr2_3:63864606-63864625 | None:intergenic | 50.0% | |
GTGAACATAGGACAAGGAGG+AGG | + | chr2_3:63864608-63864627 | None:intergenic | 50.0% | |
CATGGTGCATGGATGTGTAG+GGG | + | chr2_3:63864695-63864714 | None:intergenic | 50.0% | |
GCATGGTGCATGGATGTGTA+GGG | + | chr2_3:63864696-63864715 | None:intergenic | 50.0% | |
ACATCCATGCACCATGCCTA+TGG | - | chr2_3:63864699-63864718 | Msa0305840:CDS | 50.0% | |
TAAAGTGGACCGCCTAGCTT+AGG | + | chr2_3:63864974-63864993 | None:intergenic | 50.0% | |
CATGTACAGATGCCATTGCC+AGG | + | chr2_3:63865176-63865195 | None:intergenic | 50.0% | |
TCAAGGGCAATGCTCTGTAC+TGG | - | chr2_3:63865318-63865337 | Msa0305840:CDS | 50.0% | |
GCTCCTTTGGCTGAACGTCT+AGG | - | chr2_3:63856870-63856889 | Msa0305840:three_prime_UTR | 55.0% | |
CTACACCGGACCAACACTTG+GGG | - | chr2_3:63856917-63856936 | Msa0305840:intron | 55.0% | |
TACACCGGACCAACACTTGG+GGG | - | chr2_3:63856918-63856937 | Msa0305840:intron | 55.0% | |
TGACAACAGCAGCTGCCTGT+AGG | + | chr2_3:63857195-63857214 | None:intergenic | 55.0% | |
GCAGCTGCTGTTGTCAACTC+AGG | - | chr2_3:63857199-63857218 | Msa0305840:intron | 55.0% | |
CTTGAAGAGATGGAGGTGGG+AGG | + | chr2_3:63858015-63858034 | None:intergenic | 55.0% | |
CGAAAAATCTGATCCGGCGG+TGG | - | chr2_3:63858208-63858227 | Msa0305840:intron | 55.0% | |
GAGCTTGACAGAGACAACGG+CGG | - | chr2_3:63858480-63858499 | Msa0305840:intron | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | + | chr2_3:63858851-63858870 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | - | chr2_3:63858850-63858869 | Msa0305840:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | - | chr2_3:63858851-63858870 | Msa0305840:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | - | chr2_3:63858857-63858876 | Msa0305840:intron | 55.0% | |
GGTGGGAGGTTTAAGTGCAC+AGG | + | chr2_3:63859341-63859360 | None:intergenic | 55.0% | |
!! | CTTGAAGAGATGGTGGTGGG+AGG | + | chr2_3:63859355-63859374 | None:intergenic | 55.0% |
GGTGAGGACGGAAAATCTGG+CGG | - | chr2_3:63859548-63859567 | Msa0305840:intron | 55.0% | |
GTAGCCCAACGGTATGGGTT+TGG | - | chr2_3:63860522-63860541 | Msa0305840:intron | 55.0% | |
!! | GTGGTTAGCTTGTCAGGGGA+AGG | + | chr2_3:63860595-63860614 | None:intergenic | 55.0% |
TGGACTCTGGACCATTCCCA+AGG | - | chr2_3:63861906-63861925 | Msa0305840:intron | 55.0% | |
GGACTCTGGACCATTCCCAA+GGG | - | chr2_3:63861907-63861926 | Msa0305840:intron | 55.0% | |
GGAGTTGCTTCCCTTGGGAA+TGG | + | chr2_3:63861920-63861939 | None:intergenic | 55.0% | |
TGGCAGGAGTTGCTTCCCTT+GGG | + | chr2_3:63861925-63861944 | None:intergenic | 55.0% | |
AGCATGGGCCAATGTGGATG+TGG | + | chr2_3:63861945-63861964 | None:intergenic | 55.0% | |
TCCCACATCGCTTGGGTTCT+TGG | - | chr2_3:63863025-63863044 | Msa0305840:intron | 55.0% | |
CCCAAGAACCCAAGCGATGT+GGG | + | chr2_3:63863029-63863048 | None:intergenic | 55.0% | |
CCCACATCGCTTGGGTTCTT+GGG | - | chr2_3:63863026-63863045 | Msa0305840:intron | 55.0% | |
GTATACACGAGCTGCGCTGA+TGG | + | chr2_3:63864354-63864373 | None:intergenic | 55.0% | |
ACATAGGACAAGGAGGAGGG+GGG | + | chr2_3:63864604-63864623 | None:intergenic | 55.0% | |
GGCATGGTGCATGGATGTGT+AGG | + | chr2_3:63864697-63864716 | None:intergenic | 55.0% | |
! | GACTAAATAGCGTGCTGGCC+TGG | - | chr2_3:63865155-63865174 | Msa0305840:intron | 55.0% |
GGTGGGAGGTTGAAGTGCAC+AGG | + | chr2_3:63858001-63858020 | None:intergenic | 60.0% | |
GAGGACGGAAAATCTGGCGG+CGG | - | chr2_3:63859551-63859570 | Msa0305840:intron | 60.0% | |
GTGGCAGGAGTTGCTTCCCT+TGG | + | chr2_3:63861926-63861945 | None:intergenic | 60.0% | |
TGGGCCAATGTGGATGTGGC+AGG | + | chr2_3:63861941-63861960 | None:intergenic | 60.0% | |
GCCCAAGAACCCAAGCGATG+TGG | + | chr2_3:63863030-63863049 | None:intergenic | 60.0% | |
ATAGGACAAGGAGGAGGGGG+GGG | + | chr2_3:63864602-63864621 | None:intergenic | 60.0% | |
CATAGGACAAGGAGGAGGGG+GGG | + | chr2_3:63864603-63864622 | None:intergenic | 60.0% | |
! | ATAGCGTGCTGGCCTGGCAA+TGG | - | chr2_3:63865161-63865180 | Msa0305840:intron | 60.0% |
AGTCGCATAGCAGCCACCGC+CGG | + | chr2_3:63858224-63858243 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 63856519 | 63865535 | 63856519 | ID=Msa0305840;Name=Msa0305840 |
chr2_3 | mRNA | 63856519 | 63865535 | 63856519 | ID=Msa0305840-mRNA-1;Parent=Msa0305840;Name=Msa0305840-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.77|0.7|1|0.66|0.5|10|375|439 |
chr2_3 | exon | 63856519 | 63856904 | 63856519 | ID=Msa0305840-mRNA-1:exon:21347;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63857942 | 63858035 | 63857942 | ID=Msa0305840-mRNA-1:exon:21346;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63859243 | 63859359 | 63859243 | ID=Msa0305840-mRNA-1:exon:21345;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63859554 | 63859607 | 63859554 | ID=Msa0305840-mRNA-1:exon:21344;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63859683 | 63859799 | 63859683 | ID=Msa0305840-mRNA-1:exon:21343;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63860968 | 63861099 | 63860968 | ID=Msa0305840-mRNA-1:exon:21342;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63864643 | 63864855 | 63864643 | ID=Msa0305840-mRNA-1:exon:21341;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63864924 | 63865162 | 63864924 | ID=Msa0305840-mRNA-1:exon:21340;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63865169 | 63865288 | 63865169 | ID=Msa0305840-mRNA-1:exon:21339;Parent=Msa0305840-mRNA-1 |
chr2_3 | exon | 63865313 | 63865535 | 63865313 | ID=Msa0305840-mRNA-1:exon:21338;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63865313 | 63865535 | 63865313 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63865169 | 63865288 | 63865169 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63864924 | 63865162 | 63864924 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63864643 | 63864855 | 63864643 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63860968 | 63861099 | 63860968 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63859683 | 63859799 | 63859683 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63859554 | 63859607 | 63859554 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63859243 | 63859359 | 63859243 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63857942 | 63858035 | 63857942 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | CDS | 63856894 | 63856904 | 63856894 | ID=Msa0305840-mRNA-1:cds;Parent=Msa0305840-mRNA-1 |
chr2_3 | three_prime_UTR | 63856519 | 63856893 | 63856519 | ID=Msa0305840-mRNA-1:three_prime_utr;Parent=Msa0305840-mRNA-1 |
Gene Sequence |
Protein sequence |