Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266200 | XP_003597717.2 | 98.176 | 329 | 6 | 0 | 1 | 329 | 1 | 329 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266200 | sp|Q8S3D1|BH068_ARATH | 42.643 | 401 | 149 | 16 | 1 | 329 | 15 | 406 | 3.02e-69 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266200 | G7IUP4 | 98.176 | 329 | 6 | 0 | 1 | 329 | 1 | 329 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0266200 | 0.808197 | 3.485723e-50 | -8.615850e-47 |
| Msa0001940 | Msa0266200 | 0.802102 | 6.577852e-49 | -8.615850e-47 |
| Msa0006110 | Msa0266200 | 0.814647 | 1.385008e-51 | -8.615850e-47 |
| Msa0017950 | Msa0266200 | 0.803525 | 3.344219e-49 | -8.615850e-47 |
| Msa0023330 | Msa0266200 | 0.811671 | 6.230745e-51 | -8.615850e-47 |
| Msa0036140 | Msa0266200 | 0.817452 | 3.274085e-52 | -8.615850e-47 |
| Msa0044090 | Msa0266200 | 0.832487 | 9.191271e-56 | -8.615850e-47 |
| Msa0050820 | Msa0266200 | 0.806813 | 6.854841e-50 | -8.615850e-47 |
| Msa0054480 | Msa0266200 | 0.804861 | 1.762822e-49 | -8.615850e-47 |
| Msa0077400 | Msa0266200 | 0.801619 | 8.268063e-49 | -8.615850e-47 |
| Msa0080090 | Msa0266200 | 0.823276 | 1.511632e-53 | -8.615850e-47 |
| Msa0081020 | Msa0266200 | 0.806711 | 7.203355e-50 | -8.615850e-47 |
| Msa0084080 | Msa0266200 | 0.801209 | 1.003243e-48 | -8.615850e-47 |
| Msa0089750 | Msa0266200 | 0.806856 | 6.713213e-50 | -8.615850e-47 |
| Msa0103770 | Msa0266200 | 0.803751 | 3.002197e-49 | -8.615850e-47 |
| Msa0104670 | Msa0266200 | 0.812569 | 3.969131e-51 | -8.615850e-47 |
| Msa0108410 | Msa0266200 | 0.824628 | 7.280930e-54 | -8.615850e-47 |
| Msa0115560 | Msa0266200 | 0.808547 | 2.934913e-50 | -8.615850e-47 |
| Msa0144530 | Msa0266200 | 0.808311 | 3.296979e-50 | -8.615850e-47 |
| Msa0150860 | Msa0266200 | 0.810663 | 1.030648e-50 | -8.615850e-47 |
| Msa0175730 | Msa0266200 | 0.807245 | 5.554040e-50 | -8.615850e-47 |
| Msa0183760 | Msa0266200 | 0.808973 | 2.380100e-50 | -8.615850e-47 |
| Msa0189710 | Msa0266200 | 0.835774 | 1.379334e-56 | -8.615850e-47 |
| Msa0212990 | Msa0266200 | 0.805819 | 1.110152e-49 | -8.615850e-47 |
| Msa0219590 | Msa0266200 | 0.809585 | 1.759332e-50 | -8.615850e-47 |
| Msa0221470 | Msa0266200 | 0.816809 | 4.565406e-52 | -8.615850e-47 |
| Msa0225100 | Msa0266200 | 0.824903 | 6.270380e-54 | -8.615850e-47 |
| Msa0225110 | Msa0266200 | 0.995615 | 4.586948e-218 | -8.615850e-47 |
| Msa0225220 | Msa0266200 | 0.822836 | 1.914072e-53 | -8.615850e-47 |
| Msa0232020 | Msa0266200 | 0.835506 | 1.612767e-56 | -8.615850e-47 |
| Msa0232090 | Msa0266200 | 0.835038 | 2.117720e-56 | -8.615850e-47 |
| Msa0241140 | Msa0266200 | 0.817612 | 3.013323e-52 | -8.615850e-47 |
| Msa0244640 | Msa0266200 | 0.810068 | 1.385137e-50 | -8.615850e-47 |
| Msa0266180 | Msa0266200 | 0.823430 | 1.390917e-53 | -8.615850e-47 |
| Msa0266200 | Msa0267370 | 0.827546 | 1.473564e-54 | -8.615850e-47 |
| Msa0266200 | Msa0287740 | 0.831953 | 1.246159e-55 | -8.615850e-47 |
| Msa0266200 | Msa0287780 | 0.945730 | 1.765047e-104 | -8.615850e-47 |
| Msa0266200 | Msa0287870 | 0.830424 | 2.959628e-55 | -8.615850e-47 |
| Msa0266200 | Msa0288120 | 0.803408 | 3.535674e-49 | -8.615850e-47 |
| Msa0266200 | Msa0310090 | 0.836408 | 9.524254e-57 | -8.615850e-47 |
| Msa0266200 | Msa0326940 | 0.801145 | 1.033940e-48 | -8.615850e-47 |
| Msa0266200 | Msa0330340 | 0.813323 | 2.712517e-51 | -8.615850e-47 |
| Msa0266200 | Msa0342010 | 0.810510 | 1.112302e-50 | -8.615850e-47 |
| Msa0266200 | Msa0343280 | 0.811245 | 7.709171e-51 | -8.615850e-47 |
| Msa0266200 | Msa0360210 | 0.804978 | 1.666195e-49 | -8.615850e-47 |
| Msa0266200 | Msa0363790 | 0.817874 | 2.629880e-52 | -8.615850e-47 |
| Msa0266200 | Msa0367870 | 0.816481 | 5.409025e-52 | -8.615850e-47 |
| Msa0266200 | Msa0388340 | 0.807011 | 6.225416e-50 | -8.615850e-47 |
| Msa0266200 | Msa0403640 | 0.840957 | 6.359065e-58 | -8.615850e-47 |
| Msa0266200 | Msa0422260 | 0.825568 | 4.367275e-54 | -8.615850e-47 |
| Msa0266200 | Msa0425170 | 0.834306 | 3.235113e-56 | -8.615850e-47 |
| Msa0266200 | Msa0455760 | 0.814044 | 1.882722e-51 | -8.615850e-47 |
| Msa0266200 | Msa0464100 | 0.824774 | 6.726010e-54 | -8.615850e-47 |
| Msa0266200 | Msa0464120 | 0.824066 | 9.868815e-54 | -8.615850e-47 |
| Msa0266200 | Msa0481530 | 0.824917 | 6.225694e-54 | -8.615850e-47 |
| Msa0266200 | Msa0484650 | 0.805310 | 1.419716e-49 | -8.615850e-47 |
| Msa0266200 | Msa0486690 | 0.803787 | 2.951150e-49 | -8.615850e-47 |
| Msa0266200 | Msa0528950 | 0.804375 | 2.226948e-49 | -8.615850e-47 |
| Msa0266200 | Msa0529890 | 0.835420 | 1.695210e-56 | -8.615850e-47 |
| Msa0266200 | Msa0531180 | 0.819413 | 1.176884e-52 | -8.615850e-47 |
| Msa0266200 | Msa0545850 | 0.813371 | 2.647977e-51 | -8.615850e-47 |
| Msa0266200 | Msa0553240 | 0.814578 | 1.434598e-51 | -8.615850e-47 |
| Msa0266200 | Msa0559500 | 0.800970 | 1.122418e-48 | -8.615850e-47 |
| Msa0266200 | Msa0571010 | 0.806176 | 9.341436e-50 | -8.615850e-47 |
| Msa0266200 | Msa0571130 | 0.819143 | 1.355585e-52 | -8.615850e-47 |
| Msa0266200 | Msa0574390 | 0.812517 | 4.073791e-51 | -8.615850e-47 |
| Msa0266200 | Msa0581470 | 0.803724 | 3.041578e-49 | -8.615850e-47 |
| Msa0266200 | Msa0583360 | -0.823922 | 1.067198e-53 | -8.615850e-47 |
| Msa0266200 | Msa0585560 | 0.836808 | 7.529959e-57 | -8.615850e-47 |
| Msa0266200 | Msa0594050 | 0.803020 | 4.255146e-49 | -8.615850e-47 |
| Msa0266200 | Msa0613120 | 0.816316 | 5.889712e-52 | -8.615850e-47 |
| Msa0266200 | Msa0616070 | 0.827767 | 1.304414e-54 | -8.615850e-47 |
| Msa0266200 | Msa0625720 | 0.832986 | 6.911237e-56 | -8.615850e-47 |
| Msa0266200 | Msa0629450 | 0.802017 | 6.850275e-49 | -8.615850e-47 |
| Msa0266200 | Msa0633700 | 0.826312 | 2.906341e-54 | -8.615850e-47 |
| Msa0266200 | Msa0637600 | 0.832268 | 1.041483e-55 | -8.615850e-47 |
| Msa0266200 | Msa0637900 | 0.812454 | 4.204958e-51 | -8.615850e-47 |
| Msa0266200 | Msa0663390 | 0.824443 | 8.049545e-54 | -8.615850e-47 |
| Msa0266200 | Msa0679020 | 0.816461 | 5.464418e-52 | -8.615850e-47 |
| Msa0266200 | Msa0680660 | 0.832657 | 8.339770e-56 | -8.615850e-47 |
| Msa0266200 | Msa0681250 | 0.809853 | 1.540550e-50 | -8.615850e-47 |
| Msa0266200 | Msa0688070 | 0.803823 | 2.900053e-49 | -8.615850e-47 |
| Msa0266200 | Msa0704920 | 0.806707 | 7.216603e-50 | -8.615850e-47 |
| Msa0266200 | Msa0707250 | 0.806670 | 7.347262e-50 | -8.615850e-47 |
| Msa0266200 | Msa0733010 | 0.817822 | 2.701437e-52 | -8.615850e-47 |
| Msa0266200 | Msa0738340 | 0.817626 | 2.991727e-52 | -8.615850e-47 |
| Msa0266200 | Msa0741220 | 0.802146 | 6.442076e-49 | -8.615850e-47 |
| Msa0266200 | Msa0762970 | 0.807529 | 4.833721e-50 | -8.615850e-47 |
| Msa0266200 | Msa0763890 | 0.804559 | 2.038509e-49 | -8.615850e-47 |
| Msa0266200 | Msa0763920 | 0.801802 | 7.582734e-49 | -8.615850e-47 |
| Msa0266200 | Msa0797770 | 0.810391 | 1.179735e-50 | -8.615850e-47 |
| Msa0266200 | Msa0817460 | 0.849905 | 2.395510e-60 | -8.615850e-47 |
| Msa0266200 | Msa0832340 | 0.815817 | 7.613196e-52 | -8.615850e-47 |
| Msa0266200 | Msa0835230 | 0.819277 | 1.263950e-52 | -8.615850e-47 |
| Msa0266200 | Msa0898750 | 0.801146 | 1.033166e-48 | -8.615850e-47 |
| Msa0266200 | Msa0909770 | 0.804331 | 2.274211e-49 | -8.615850e-47 |
| Msa0266200 | Msa0926470 | 0.803051 | 4.191836e-49 | -8.615850e-47 |
| Msa0266200 | Msa0927310 | 0.821048 | 4.967645e-53 | -8.615850e-47 |
| Msa0266200 | Msa0939300 | 0.816969 | 4.204326e-52 | -8.615850e-47 |
| Msa0266200 | Msa0945550 | 0.803472 | 3.430170e-49 | -8.615850e-47 |
| Msa0266200 | Msa0967870 | 0.818258 | 2.152873e-52 | -8.615850e-47 |
| Msa0266200 | Msa0972960 | 0.803427 | 3.503653e-49 | -8.615850e-47 |
| Msa0266200 | Msa0986510 | 0.825523 | 4.476196e-54 | -8.615850e-47 |
| Msa0266200 | Msa0999290 | 0.821807 | 3.317657e-53 | -8.615850e-47 |
| Msa0266200 | Msa1016320 | 0.817034 | 4.066025e-52 | -8.615850e-47 |
| Msa0266200 | Msa1034500 | 0.808648 | 2.793042e-50 | -8.615850e-47 |
| Msa0266200 | Msa1035480 | 0.802379 | 5.770390e-49 | -8.615850e-47 |
| Msa0266200 | Msa1036610 | 0.830037 | 3.679028e-55 | -8.615850e-47 |
| Msa0266200 | Msa1043130 | -0.862231 | 5.868986e-64 | -8.615850e-47 |
| Msa0266200 | Msa1050340 | 0.814539 | 1.463573e-51 | -8.615850e-47 |
| Msa0266200 | Msa1066670 | 0.823750 | 1.170549e-53 | -8.615850e-47 |
| Msa0266200 | Msa1083840 | 0.804885 | 1.742641e-49 | -8.615850e-47 |
| Msa0266200 | Msa1106510 | 0.811255 | 7.670635e-51 | -8.615850e-47 |
| Msa0266200 | Msa1145810 | 0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0266200 | Msa1147740 | 0.808173 | 3.526701e-50 | -8.615850e-47 |
| Msa0266200 | Msa1155170 | -0.820137 | 8.040200e-53 | -8.615850e-47 |
| Msa0266200 | Msa1162780 | 0.825529 | 4.461298e-54 | -8.615850e-47 |
| Msa0266200 | Msa1163090 | 0.822054 | 2.908479e-53 | -8.615850e-47 |
| Msa0266200 | Msa1170760 | 0.807365 | 5.238539e-50 | -8.615850e-47 |
| Msa0266200 | Msa1224480 | 0.801586 | 8.394872e-49 | -8.615850e-47 |
| Msa0266200 | Msa1225860 | -0.831253 | 1.853751e-55 | -8.615850e-47 |
| Msa0266200 | Msa1227150 | 0.805659 | 1.199867e-49 | -8.615850e-47 |
| Msa0266200 | Msa1238820 | 0.802175 | 6.355471e-49 | -8.615850e-47 |
| Msa0266200 | Msa1284900 | 0.808050 | 3.746045e-50 | -8.615850e-47 |
| Msa0266200 | Msa1313280 | 0.801071 | 1.070247e-48 | -8.615850e-47 |
| Msa0266200 | Msa1325410 | -0.819248 | 1.283299e-52 | -8.615850e-47 |
| Msa0266200 | Msa1331000 | 0.812657 | 3.796876e-51 | -8.615850e-47 |
| Msa0266200 | Msa1342380 | 0.823078 | 1.681324e-53 | -8.615850e-47 |
| Msa0266200 | Msa1345810 | 0.814218 | 1.722854e-51 | -8.615850e-47 |
| Msa0266200 | Msa1352280 | -0.840072 | 1.083852e-57 | -8.615850e-47 |
| Msa0266200 | Msa1355450 | 0.812192 | 4.797303e-51 | -8.615850e-47 |
| Msa0266200 | Msa1356510 | 0.804438 | 2.160346e-49 | -8.615850e-47 |
| Msa0266200 | Msa1358500 | 0.812885 | 3.384691e-51 | -8.615850e-47 |
| Msa0266200 | Msa1368360 | 0.808940 | 2.419536e-50 | -8.615850e-47 |
| Msa0266200 | Msa1374470 | 0.802236 | 6.173170e-49 | -8.615850e-47 |
| Msa0266200 | Msa1389200 | 0.806928 | 6.480571e-50 | -8.615850e-47 |
| Msa0266200 | Msa1405030 | 0.817007 | 4.121835e-52 | -8.615850e-47 |
| Msa0266200 | Msa1412130 | 0.808400 | 3.155685e-50 | -8.615850e-47 |
| Msa0266200 | Msa1425260 | 0.833335 | 5.657814e-56 | -8.615850e-47 |
| Msa0266200 | Msa1433810 | 0.805737 | 1.155576e-49 | -8.615850e-47 |
| Msa0266200 | Msa1440560 | 0.803083 | 4.128918e-49 | -8.615850e-47 |
| Msa0266200 | Msa1440720 | 0.823798 | 1.140715e-53 | -8.615850e-47 |
| Msa0266200 | Msa1452710 | 0.813942 | 1.982829e-51 | -8.615850e-47 |
| Msa0266200 | Msa1458680 | 0.829272 | 5.648849e-55 | -8.615850e-47 |
| Msa0266200 | Msa1463900 | 0.827917 | 1.200603e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266200 | MtrunA17_Chr2g0331431 | 98.176 | 329 | 6 | 0 | 1 | 329 | 1 | 329 | 0.0 | 667 |
| Msa0266200 | MtrunA17_Chr6g0486111 | 47.688 | 346 | 127 | 10 | 1 | 329 | 14 | 322 | 4.85e-88 | 267 |
| Msa0266200 | MtrunA17_Chr8g0390301 | 47.578 | 351 | 132 | 12 | 1 | 329 | 15 | 335 | 2.53e-76 | 237 |
| Msa0266200 | MtrunA17_Chr2g0318971 | 47.368 | 152 | 49 | 3 | 175 | 326 | 313 | 433 | 2.38e-34 | 130 |
| Msa0266200 | MtrunA17_Chr2g0280631 | 45.625 | 160 | 55 | 3 | 167 | 326 | 283 | 410 | 3.55e-32 | 124 |
| Msa0266200 | MtrunA17_Chr1g0207771 | 45.695 | 151 | 60 | 3 | 175 | 324 | 141 | 270 | 6.16e-32 | 120 |
| Msa0266200 | MtrunA17_Chr8g0361501 | 46.452 | 155 | 52 | 3 | 175 | 329 | 320 | 443 | 3.03e-31 | 122 |
| Msa0266200 | MtrunA17_Chr3g0141841 | 45.390 | 141 | 47 | 4 | 188 | 326 | 339 | 451 | 7.49e-30 | 118 |
| Msa0266200 | MtrunA17_Chr4g0045561 | 44.444 | 135 | 35 | 2 | 189 | 323 | 56 | 150 | 1.02e-26 | 103 |
| Msa0266200 | MtrunA17_Chr1g0199091 | 42.208 | 154 | 55 | 4 | 175 | 325 | 405 | 527 | 3.75e-26 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0266200 | AT4G29100.1 | 42.643 | 401 | 149 | 16 | 1 | 329 | 15 | 406 | 3.07e-70 | 224 |
| Msa0266200 | AT2G20100.1 | 59.322 | 177 | 58 | 4 | 163 | 329 | 189 | 361 | 6.33e-60 | 196 |
| Msa0266200 | AT2G20100.3 | 47.085 | 223 | 58 | 5 | 163 | 329 | 189 | 407 | 7.97e-51 | 174 |
| Msa0266200 | AT4G29100.2 | 39.349 | 338 | 128 | 14 | 1 | 270 | 15 | 343 | 5.98e-43 | 152 |
| Msa0266200 | AT2G20100.4 | 64.035 | 114 | 31 | 3 | 163 | 270 | 189 | 298 | 2.08e-36 | 134 |
| Msa0266200 | AT2G20100.2 | 64.035 | 114 | 31 | 3 | 163 | 270 | 189 | 298 | 2.08e-36 | 134 |
| Msa0266200 | AT1G27660.1 | 47.904 | 167 | 46 | 6 | 173 | 328 | 316 | 452 | 9.58e-34 | 129 |
| Msa0266200 | AT3G19500.1 | 48.000 | 150 | 45 | 3 | 175 | 324 | 140 | 256 | 9.92e-33 | 122 |
| Msa0266200 | AT3G20640.4 | 43.871 | 155 | 55 | 3 | 175 | 329 | 269 | 391 | 1.05e-30 | 120 |
| Msa0266200 | AT3G20640.1 | 43.871 | 155 | 55 | 3 | 175 | 329 | 331 | 453 | 2.29e-30 | 120 |
| Msa0266200 | AT1G61660.7 | 44.079 | 152 | 56 | 2 | 175 | 326 | 266 | 388 | 3.99e-28 | 113 |
| Msa0266200 | AT1G61660.1 | 44.079 | 152 | 56 | 2 | 175 | 326 | 266 | 388 | 3.99e-28 | 113 |
| Msa0266200 | AT1G61660.3 | 44.079 | 152 | 56 | 2 | 175 | 326 | 263 | 385 | 4.51e-28 | 112 |
| Msa0266200 | AT2G31730.2 | 40.441 | 136 | 41 | 1 | 189 | 324 | 39 | 134 | 2.67e-26 | 102 |
| Msa0266200 | AT2G31730.1 | 40.441 | 136 | 41 | 1 | 189 | 324 | 39 | 134 | 2.67e-26 | 102 |
| Msa0266200 | AT1G05710.6 | 39.706 | 136 | 42 | 1 | 189 | 324 | 29 | 124 | 3.18e-25 | 99.4 |
| Msa0266200 | AT1G05710.11 | 39.706 | 136 | 42 | 1 | 189 | 324 | 37 | 132 | 3.52e-25 | 99.4 |
| Msa0266200 | AT1G05710.5 | 39.706 | 136 | 42 | 1 | 189 | 324 | 37 | 132 | 3.52e-25 | 99.4 |
| Msa0266200 | AT1G05710.1 | 39.706 | 136 | 42 | 1 | 189 | 324 | 37 | 132 | 3.52e-25 | 99.4 |
| Msa0266200 | AT1G05710.14 | 39.706 | 136 | 42 | 1 | 189 | 324 | 37 | 132 | 3.52e-25 | 99.4 |
| Msa0266200 | AT1G05710.3 | 39.706 | 136 | 42 | 1 | 189 | 324 | 37 | 132 | 3.52e-25 | 99.4 |
| Msa0266200 | AT1G05710.4 | 39.706 | 136 | 42 | 1 | 189 | 324 | 37 | 132 | 3.52e-25 | 99.4 |
| Msa0266200 | AT1G05710.12 | 39.706 | 136 | 42 | 1 | 189 | 324 | 37 | 132 | 3.52e-25 | 99.4 |
| Msa0266200 | AT4G05170.3 | 44.030 | 134 | 51 | 3 | 175 | 306 | 41 | 152 | 7.21e-25 | 99.4 |
| Msa0266200 | AT1G31050.6 | 41.358 | 162 | 64 | 5 | 166 | 325 | 300 | 432 | 1.97e-24 | 103 |
| Msa0266200 | AT1G31050.7 | 41.358 | 162 | 64 | 5 | 166 | 325 | 296 | 428 | 2.12e-24 | 103 |
| Msa0266200 | AT1G31050.1 | 41.358 | 162 | 64 | 5 | 166 | 325 | 296 | 428 | 2.27e-24 | 103 |
| Msa0266200 | AT4G05170.5 | 44.030 | 134 | 51 | 3 | 175 | 306 | 134 | 245 | 2.68e-24 | 100 |
| Msa0266200 | AT4G05170.2 | 44.030 | 134 | 51 | 3 | 175 | 306 | 159 | 270 | 3.56e-24 | 100 |
| Msa0266200 | AT4G05170.1 | 44.030 | 134 | 51 | 3 | 175 | 306 | 177 | 288 | 3.95e-24 | 100 |
| Msa0266200 | AT1G05710.9 | 42.647 | 136 | 60 | 4 | 189 | 324 | 29 | 146 | 3.09e-23 | 94.7 |
| Msa0266200 | AT1G05710.8 | 42.647 | 136 | 60 | 4 | 189 | 324 | 29 | 146 | 3.09e-23 | 94.7 |
| Msa0266200 | AT1G05710.13 | 42.647 | 136 | 60 | 4 | 189 | 324 | 37 | 154 | 4.47e-23 | 94.4 |
| Msa0266200 | AT1G05710.2 | 42.647 | 136 | 60 | 4 | 189 | 324 | 37 | 154 | 4.47e-23 | 94.4 |
| Msa0266200 | AT1G05710.10 | 42.647 | 136 | 60 | 4 | 189 | 324 | 37 | 154 | 4.47e-23 | 94.4 |
| Msa0266200 | AT1G05710.7 | 42.647 | 136 | 60 | 4 | 189 | 324 | 37 | 154 | 4.47e-23 | 94.4 |
| Msa0266200 | AT4G21340.1 | 47.445 | 137 | 44 | 5 | 175 | 309 | 176 | 286 | 8.60e-23 | 96.7 |
| Msa0266200 | AT4G05170.7 | 64.789 | 71 | 25 | 0 | 175 | 245 | 159 | 229 | 9.66e-22 | 92.4 |
| Msa0266200 | AT3G19500.2 | 65.152 | 66 | 23 | 0 | 175 | 240 | 140 | 205 | 7.14e-21 | 89.7 |
| Msa0266200 | AT1G61660.6 | 64.789 | 71 | 25 | 0 | 175 | 245 | 266 | 336 | 1.25e-20 | 91.7 |
| Msa0266200 | AT1G61660.2 | 64.789 | 71 | 25 | 0 | 175 | 245 | 266 | 336 | 1.25e-20 | 91.7 |
| Msa0266200 | AT1G49830.1 | 40.945 | 127 | 41 | 3 | 199 | 325 | 134 | 226 | 3.64e-20 | 88.6 |
| Msa0266200 | AT1G49830.2 | 40.945 | 127 | 41 | 3 | 199 | 325 | 133 | 225 | 3.75e-20 | 88.6 |
| Msa0266200 | AT3G20640.3 | 61.972 | 71 | 26 | 1 | 175 | 245 | 331 | 400 | 5.29e-20 | 90.5 |
| Msa0266200 | AT4G05170.6 | 70.690 | 58 | 17 | 0 | 175 | 232 | 159 | 216 | 1.46e-19 | 86.3 |
| Msa0266200 | AT4G05170.4 | 70.690 | 58 | 17 | 0 | 175 | 232 | 159 | 216 | 1.46e-19 | 86.3 |
| Msa0266200 | AT3G20640.2 | 63.793 | 58 | 20 | 1 | 175 | 232 | 331 | 387 | 2.52e-15 | 76.6 |
| Msa0266200 | AT1G61660.4 | 34.641 | 153 | 69 | 3 | 174 | 326 | 245 | 366 | 6.71e-14 | 72.4 |
| Msa0266200 | AT1G31050.2 | 52.857 | 70 | 32 | 1 | 166 | 234 | 296 | 365 | 1.99e-13 | 70.9 |
| Msa0266200 | AT1G31050.5 | 52.857 | 70 | 32 | 1 | 166 | 234 | 300 | 369 | 2.16e-13 | 70.9 |
Find 106 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGATCAACCATAATTAA+TGG | 0.222346 | 2_2:-66638054 | None:intergenic |
| TATATGCATGCCATTAATTA+TGG | 0.252292 | 2_2:+66638044 | Msa0266200:three_prime_UTR |
| CAACATGTTGGAAGTGAAAA+TGG | 0.269929 | 2_2:+66637886 | Msa0266200:CDS |
| TGTGAGTAATTAACCTTTAG+AGG | 0.282892 | 2_2:-66635993 | None:intergenic |
| GTGAAAATGGAGCTGATTAC+TGG | 0.289834 | 2_2:+66637899 | Msa0266200:CDS |
| TGAGTTGATCTTATTAAGTT+TGG | 0.296518 | 2_2:+66638131 | Msa0266200:three_prime_UTR |
| CCAAACAAGACTTTGGATAA+AGG | 0.302743 | 2_2:-66634802 | None:intergenic |
| TGCTTTATTATATCCATAGA+TGG | 0.303574 | 2_2:-66635520 | None:intergenic |
| CTTCAATTGATATGTAAGTT+TGG | 0.306683 | 2_2:+66638161 | Msa0266200:three_prime_UTR |
| CTTAAGTAGTGATAATATAT+TGG | 0.313482 | 2_2:+66635678 | Msa0266200:CDS |
| CATACCTGACCGGGGTCTTC+AGG | 0.315826 | 2_2:-66637054 | None:intergenic |
| AAGAATACCTGGTTTGGAAT+TGG | 0.331532 | 2_2:-66637395 | None:intergenic |
| CACCAGCTAGTTTCTCCATT+TGG | 0.331535 | 2_2:+66636308 | Msa0266200:CDS |
| ACAGAATGCAGAAGGTAATA+AGG | 0.336565 | 2_2:+66637813 | Msa0266200:intron |
| CCTTTATCCAAAGTCTTGTT+TGG | 0.359958 | 2_2:+66634802 | Msa0266200:five_prime_UTR |
| GATTACTGGGCACCAGCATT+TGG | 0.361562 | 2_2:+66637913 | Msa0266200:CDS |
| AAAGAAAAGAATACCTGGTT+TGG | 0.370691 | 2_2:-66637401 | None:intergenic |
| TGGTTCATCTTGGTCACATA+TGG | 0.375811 | 2_2:+66635621 | Msa0266200:CDS |
| ATCTTCAAGAGTTCCATCTA+TGG | 0.378040 | 2_2:+66635507 | Msa0266200:CDS |
| TATGGTTGATCATCAATAAC+TGG | 0.381301 | 2_2:+66638062 | Msa0266200:three_prime_UTR |
| GGATGCATGCTCCACCAGTT+AGG | 0.382855 | 2_2:-66635012 | None:intergenic |
| AGCTAGTGATATGAGAGCTT+GGG | 0.388897 | 2_2:-66635657 | None:intergenic |
| TGATGGCTGGGAACCCTAAC+TGG | 0.390562 | 2_2:+66634998 | Msa0266200:CDS |
| GGCACTCAGCACCCCTTACT+TGG | 0.395598 | 2_2:+66636795 | Msa0266200:intron |
| CTGGATCACTTGGTTCATCT+TGG | 0.397211 | 2_2:+66635611 | Msa0266200:CDS |
| CTTGTTTGGTTGCACATACA+AGG | 0.409409 | 2_2:+66634816 | Msa0266200:five_prime_UTR |
| TTGAAGAAACGTAAAGTCTT+GGG | 0.413686 | 2_2:-66634739 | None:intergenic |
| GATGCTGCAGTGTCCAAGTA+AGG | 0.413970 | 2_2:-66636808 | None:intergenic |
| TGAGAGCTTGGGGAAGAAAC+TGG | 0.431844 | 2_2:-66635646 | None:intergenic |
| TAGAAGCCATTGGATACATC+AGG | 0.435008 | 2_2:+66636580 | Msa0266200:CDS |
| TTTACCTCAGATATTTGATC+TGG | 0.452488 | 2_2:-66635742 | None:intergenic |
| GCAAAGAACTTGAAGAGTAG+AGG | 0.454514 | 2_2:+66637835 | Msa0266200:CDS |
| CGTGCTAACTCTGGATCACT+TGG | 0.461704 | 2_2:+66635601 | Msa0266200:CDS |
| CCAATAAAGCATACCTGACC+GGG | 0.469066 | 2_2:-66637063 | None:intergenic |
| AAGCTAGTGATATGAGAGCT+TGG | 0.469144 | 2_2:-66635658 | None:intergenic |
| TAGTTTGTTACCTTTCCAAA+TGG | 0.469992 | 2_2:-66636323 | None:intergenic |
| ATATGAAGCAAGAAAATTTG+TGG | 0.470978 | 2_2:+66637954 | Msa0266200:three_prime_UTR |
| TAATACATTTAAACAAAAGA+AGG | 0.472229 | 2_2:-66638221 | None:intergenic |
| CTGAAGTACCTCCTCAATCA+TGG | 0.473133 | 2_2:+66635112 | Msa0266200:CDS |
| TCTGTATTATTAGAAGCCAT+TGG | 0.473376 | 2_2:+66636570 | Msa0266200:CDS |
| CTGGAGTTAATAAGAAGGCT+AGG | 0.474420 | 2_2:+66635946 | Msa0266200:CDS |
| AGAGGTGGTTGGCTTGAAGA+TGG | 0.480437 | 2_2:-66635975 | None:intergenic |
| ATCCCTCCTCAATATATGCT+TGG | 0.481586 | 2_2:+66635048 | Msa0266200:CDS |
| GTCATTCTGTGGTAATGAAA+AGG | 0.483333 | 2_2:+66638000 | Msa0266200:three_prime_UTR |
| TGTGCAACCAAACAAGACTT+TGG | 0.484086 | 2_2:-66634809 | None:intergenic |
| TCCAATAAAGCATACCTGAC+CGG | 0.484473 | 2_2:-66637064 | None:intergenic |
| TTCAAGCCAACCACCTCTAA+AGG | 0.487455 | 2_2:+66635980 | Msa0266200:CDS |
| CCAGCCATCATTTGCTACAA+TGG | 0.492326 | 2_2:-66634985 | None:intergenic |
| ATAGATGGAACTCTTGAAGA+TGG | 0.502537 | 2_2:-66635505 | None:intergenic |
| GATGCATGCTCCACCAGTTA+GGG | 0.504766 | 2_2:-66635011 | None:intergenic |
| CCATTGTAGCAAATGATGGC+TGG | 0.505228 | 2_2:+66634985 | Msa0266200:exon |
| GAGGAGTTTCGTGCTAACTC+TGG | 0.506033 | 2_2:+66635592 | Msa0266200:CDS |
| TGGGCACCAGCATTTGGAAG+TGG | 0.511663 | 2_2:+66637919 | Msa0266200:CDS |
| GGAGGGATATTCAAAGATGA+TGG | 0.512004 | 2_2:-66635033 | None:intergenic |
| GTTGAAGAAACGTAAAGTCT+TGG | 0.512034 | 2_2:-66634740 | None:intergenic |
| AGTCTCATGATATATGTGTA+AGG | 0.512334 | 2_2:-66634956 | None:intergenic |
| TAGTGTAATAGCTCAACTAC+TGG | 0.514825 | 2_2:+66635927 | Msa0266200:intron |
| CCAAGTCTCTCTTCTTCACC+AGG | 0.522523 | 2_2:-66635427 | None:intergenic |
| ATTTCCTGAAGACCCCGGTC+AGG | 0.529122 | 2_2:+66637050 | Msa0266200:CDS |
| TGATATATGTGTAAGGACTA+AGG | 0.530074 | 2_2:-66634949 | None:intergenic |
| TAAAACCCACTTCCAAATGC+TGG | 0.531421 | 2_2:-66637925 | None:intergenic |
| AATTAACCTTTAGAGGTGGT+TGG | 0.534058 | 2_2:-66635986 | None:intergenic |
| TTTCTGTCAAGGAATTGAAA+GGG | 0.538293 | 2_2:-66635083 | None:intergenic |
| GTTTCTACAGAGTCAAATTG+AGG | 0.544344 | 2_2:+66636602 | Msa0266200:CDS |
| GAGTTAGCACGAAACTCCTC+AGG | 0.546788 | 2_2:-66635589 | None:intergenic |
| TTCCAAATGGAGAAACTAGC+TGG | 0.547701 | 2_2:-66636310 | None:intergenic |
| CATTGTAGCAAATGATGGCT+GGG | 0.551321 | 2_2:+66634986 | Msa0266200:exon |
| GCTAGTTTCTCCATTTGGAA+AGG | 0.554411 | 2_2:+66636313 | Msa0266200:CDS |
| CCTGGTGAAGAAGAGAGACT+TGG | 0.557044 | 2_2:+66635427 | Msa0266200:CDS |
| GGGCACCAGCATTTGGAAGT+GGG | 0.558978 | 2_2:+66637920 | Msa0266200:CDS |
| TGAAAATGGAGCTGATTACT+GGG | 0.559536 | 2_2:+66637900 | Msa0266200:CDS |
| TATAATAAACAGAATGCAGA+AGG | 0.559856 | 2_2:+66637805 | Msa0266200:intron |
| AGTAGTTGACTCCATGATTG+AGG | 0.561864 | 2_2:-66635123 | None:intergenic |
| TGGAGTTAATAAGAAGGCTA+GGG | 0.563568 | 2_2:+66635947 | Msa0266200:CDS |
| GAAGAGTAGAGGGTTGTGCT+TGG | 0.563799 | 2_2:+66637846 | Msa0266200:CDS |
| CAAAGAACTTGAAGAGTAGA+GGG | 0.566692 | 2_2:+66637836 | Msa0266200:CDS |
| TGATCCATTGTAGCAAATGA+TGG | 0.567554 | 2_2:+66634981 | Msa0266200:exon |
| AATACATTTAAACAAAAGAA+GGG | 0.567562 | 2_2:-66638220 | None:intergenic |
| ACATGTTGTGTGCATGACAC+TGG | 0.568881 | 2_2:-66637871 | None:intergenic |
| AACTACTGGAGTTAATAAGA+AGG | 0.572553 | 2_2:+66635941 | Msa0266200:CDS |
| ATCTAGCTGTTGGATGACAC+TGG | 0.583620 | 2_2:+66637353 | Msa0266200:intron |
| GAATCTGAATCAGGTGAGGA+AGG | 0.588844 | 2_2:+66636256 | Msa0266200:intron |
| GAAGATCCAAGCATATATTG+AGG | 0.591487 | 2_2:-66635054 | None:intergenic |
| TAGAAACCTGATGTATCCAA+TGG | 0.592817 | 2_2:-66636586 | None:intergenic |
| ATGCTGCAGTGTCCAAGTAA+GGG | 0.597172 | 2_2:-66636807 | None:intergenic |
| ATAAAGCATGAAGTTTCTCA+AGG | 0.600376 | 2_2:+66635535 | Msa0266200:CDS |
| CATCATGAGCAGTCATTCTG+TGG | 0.603338 | 2_2:+66637989 | Msa0266200:three_prime_UTR |
| GAGCGCTCCAATTCCAAACC+AGG | 0.604751 | 2_2:+66637388 | Msa0266200:CDS |
| GCTAGTGATATGAGAGCTTG+GGG | 0.616346 | 2_2:-66635656 | None:intergenic |
| GATCCAAGCATATATTGAGG+AGG | 0.624438 | 2_2:-66635051 | None:intergenic |
| ATCCAAGCATATATTGAGGA+GGG | 0.625532 | 2_2:-66635050 | None:intergenic |
| AATTTAATTAGATCAGAGAG+AGG | 0.626594 | 2_2:-66638097 | None:intergenic |
| CAGGTGAGGAAGGAGAAGCT+AGG | 0.634871 | 2_2:+66636266 | Msa0266200:intron |
| TCTGTATTTCCTGAAGACCC+CGG | 0.639899 | 2_2:+66637045 | Msa0266200:CDS |
| GAGTAATTAACCTTTAGAGG+TGG | 0.639994 | 2_2:-66635990 | None:intergenic |
| TGAAGAAACGTAAAGTCTTG+GGG | 0.656303 | 2_2:-66634738 | None:intergenic |
| GTGTCATGCACACAACATGT+TGG | 0.662430 | 2_2:+66637874 | Msa0266200:CDS |
| TGCTGCAGTGTCCAAGTAAG+GGG | 0.663325 | 2_2:-66636806 | None:intergenic |
| ACTACCAGATCAAATATCTG+AGG | 0.665989 | 2_2:+66635738 | Msa0266200:CDS |
| ACAAGGAAATATCATCACAA+AGG | 0.676273 | 2_2:+66634833 | Msa0266200:five_prime_UTR |
| AGTTGACTCCATGATTGAGG+AGG | 0.689840 | 2_2:-66635120 | None:intergenic |
| TCAACAAGGGCATCATCCTG+AGG | 0.692914 | 2_2:+66635573 | Msa0266200:CDS |
| ATTGGATTTCACTTACAACA+AGG | 0.702031 | 2_2:+66635696 | Msa0266200:CDS |
| TATATGTGTAAGGACTAAGG+AGG | 0.708378 | 2_2:-66634946 | None:intergenic |
| TGGCTGGGAACCCTAACTGG+TGG | 0.716766 | 2_2:+66635001 | Msa0266200:CDS |
| CAATAAAGCATACCTGACCG+GGG | 0.742945 | 2_2:-66637062 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAATAAAATTAAAAA+AGG | - | chr2_2:66636993-66637012 | None:intergenic | 0.0% |
| !! | AATATAGTATTATTATTGAA+GGG | + | chr2_2:66636953-66636972 | Msa0266200:intron | 10.0% |
| !! | AAAATAAAATTAAAAAAGGA+AGG | - | chr2_2:66636989-66637008 | None:intergenic | 10.0% |
| !!! | TTTTATAAAAAACTATTAAC+AGG | + | chr2_2:66637005-66637024 | Msa0266200:intron | 10.0% |
| !! | ATATATATATATATATAGGA+GGG | - | chr2_2:66637485-66637504 | None:intergenic | 10.0% |
| !! | AATATATATATATATATAGG+AGG | - | chr2_2:66637486-66637505 | None:intergenic | 10.0% |
| !! | TACAAAAATTTCATTTCTTA+AGG | + | chr2_2:66634889-66634908 | Msa0266200:five_prime_UTR | 15.0% |
| !!! | TTTTCTTCATTATAATTACA+TGG | + | chr2_2:66635360-66635379 | Msa0266200:intron | 15.0% |
| !!! | TTTTTTTTTGAAGGATATAT+AGG | + | chr2_2:66635794-66635813 | Msa0266200:intron | 15.0% |
| !! | TAATTTCTATCTTAATTACT+TGG | + | chr2_2:66636047-66636066 | Msa0266200:intron | 15.0% |
| !! | GAATATAGTATTATTATTGA+AGG | + | chr2_2:66636952-66636971 | Msa0266200:intron | 15.0% |
| !! | AATGAATTCTAATTAATTGA+TGG | - | chr2_2:66637091-66637110 | None:intergenic | 15.0% |
| !! | AATTCATTAGAATCAAATTA+AGG | + | chr2_2:66637103-66637122 | Msa0266200:intron | 15.0% |
| !! | ATTCATTAGAATCAAATTAA+GGG | + | chr2_2:66637104-66637123 | Msa0266200:intron | 15.0% |
| !! | TATATATATATATATAGGAG+GGG | - | chr2_2:66637484-66637503 | None:intergenic | 15.0% |
| !!! | AATGTCACTTTAATAAATAA+TGG | + | chr2_2:66637780-66637799 | Msa0266200:intron | 15.0% |
| !! | AATACATTTAAACAAAAGAA+GGG | - | chr2_2:66638223-66638242 | None:intergenic | 15.0% |
| !! | TAATACATTTAAACAAAAGA+AGG | - | chr2_2:66638224-66638243 | None:intergenic | 15.0% |
| !! | GAAGAAAAAAAACATGAATA+AGG | - | chr2_2:66635348-66635367 | None:intergenic | 20.0% |
| !! | CTTAAGTAGTGATAATATAT+TGG | + | chr2_2:66635678-66635697 | Msa0266200:CDS | 20.0% |
| !!! | AAATATCTGAGGTAAATTAT+AGG | + | chr2_2:66635749-66635768 | Msa0266200:intron | 20.0% |
| !! | GTAAATTATAGGTCATATAT+AGG | + | chr2_2:66635760-66635779 | Msa0266200:intron | 20.0% |
| !! | GAAATTATAGAAAAGAAAAG+AGG | - | chr2_2:66636034-66636053 | None:intergenic | 20.0% |
| !! | AAATTCTTATCCTTAAGTAT+AGG | + | chr2_2:66636209-66636228 | Msa0266200:intron | 20.0% |
| !!! | TAATTTTGAACCTATACTTA+AGG | - | chr2_2:66636222-66636241 | None:intergenic | 20.0% |
| !! | ACAATGGTTTATGATAATTA+TGG | - | chr2_2:66636359-66636378 | None:intergenic | 20.0% |
| !! | AAACATTCTTTCTTTAGTTA+TGG | + | chr2_2:66636738-66636757 | Msa0266200:intron | 20.0% |
| !! | AACATTCTTTCTTTAGTTAT+GGG | + | chr2_2:66636739-66636758 | Msa0266200:intron | 20.0% |
| !!! | CTTGTTATTTCAAATTTCAA+TGG | - | chr2_2:66637208-66637227 | None:intergenic | 20.0% |
| !!! | CATTGAAATTTGAAATAACA+AGG | + | chr2_2:66637206-66637225 | Msa0266200:intron | 20.0% |
| !! | TGCTTTATTATATCCATAGA+TGG | - | chr2_2:66635523-66635542 | None:intergenic | 25.0% |
| !! | AGAATTTTTATGGTCAACAA+GGG | + | chr2_2:66635560-66635579 | Msa0266200:CDS | 25.0% |
| ! | CAAAAAGAATATTACAGTGT+TGG | - | chr2_2:66636138-66636157 | None:intergenic | 25.0% |
| ! | ATTATATGTGAATCTGAATC+AGG | + | chr2_2:66636247-66636266 | Msa0266200:intron | 25.0% |
| ! | AACCATTGTTTGTGTTAATT+TGG | + | chr2_2:66636370-66636389 | Msa0266200:intron | 25.0% |
| ! | AACCAAATTAACACAAACAA+TGG | - | chr2_2:66636375-66636394 | None:intergenic | 25.0% |
| ! | TTCAATCAATGACAAAAGAT+AGG | - | chr2_2:66636473-66636492 | None:intergenic | 25.0% |
| !!! | ACTTTTCTCTGAAATTGAAT+AGG | + | chr2_2:66636884-66636903 | Msa0266200:intron | 25.0% |
| ! | GAAATTGAATAGGACAAAAA+TGG | + | chr2_2:66636894-66636913 | Msa0266200:intron | 25.0% |
| ! | AAAAGAAAGAAAAGAATACC+TGG | - | chr2_2:66637409-66637428 | None:intergenic | 25.0% |
| ! | TACTAAAATCATGATTCCAT+GGG | - | chr2_2:66637446-66637465 | None:intergenic | 25.0% |
| ! | ATACTAAAATCATGATTCCA+TGG | - | chr2_2:66637447-66637466 | None:intergenic | 25.0% |
| ! | TATCATCAAGTGCATAAATT+GGG | + | chr2_2:66637615-66637634 | Msa0266200:intron | 25.0% |
| ! | TATAATAAACAGAATGCAGA+AGG | + | chr2_2:66637805-66637824 | Msa0266200:intron | 25.0% |
| ! | ATATGAAGCAAGAAAATTTG+TGG | + | chr2_2:66637954-66637973 | Msa0266200:three_prime_UTR | 25.0% |
| ! | TATATGCATGCCATTAATTA+TGG | + | chr2_2:66638044-66638063 | Msa0266200:three_prime_UTR | 25.0% |
| ! | TGATGATCAACCATAATTAA+TGG | - | chr2_2:66638057-66638076 | None:intergenic | 25.0% |
| ! | AATTTAATTAGATCAGAGAG+AGG | - | chr2_2:66638100-66638119 | None:intergenic | 25.0% |
| !!! | TGAGTTGATCTTATTAAGTT+TGG | + | chr2_2:66638131-66638150 | Msa0266200:three_prime_UTR | 25.0% |
| ! | CTTCAATTGATATGTAAGTT+TGG | + | chr2_2:66638161-66638180 | Msa0266200:three_prime_UTR | 25.0% |
| ACAAGGAAATATCATCACAA+AGG | + | chr2_2:66634833-66634852 | Msa0266200:five_prime_UTR | 30.0% | |
| TGATATATGTGTAAGGACTA+AGG | - | chr2_2:66634952-66634971 | None:intergenic | 30.0% | |
| AGTCTCATGATATATGTGTA+AGG | - | chr2_2:66634959-66634978 | None:intergenic | 30.0% | |
| TTTCTGTCAAGGAATTGAAA+GGG | - | chr2_2:66635086-66635105 | None:intergenic | 30.0% | |
| ! | TTTTCTGTCAAGGAATTGAA+AGG | - | chr2_2:66635087-66635106 | None:intergenic | 30.0% |
| ! | TTCAGCATTATTTTCTGTCA+AGG | - | chr2_2:66635097-66635116 | None:intergenic | 30.0% |
| ! | GTGATTTAAAATTGTGGTGA+TGG | - | chr2_2:66635226-66635245 | None:intergenic | 30.0% |
| ! | GCAACTGTGATTTAAAATTG+TGG | - | chr2_2:66635232-66635251 | None:intergenic | 30.0% |
| ! | CTACAGTATAGAAGATTTTG+AGG | - | chr2_2:66635277-66635296 | None:intergenic | 30.0% |
| ! | TACATGGTGTGAAAATTTTG+AGG | + | chr2_2:66635376-66635395 | Msa0266200:intron | 30.0% |
| ! | ACATGGTGTGAAAATTTTGA+GGG | + | chr2_2:66635377-66635396 | Msa0266200:intron | 30.0% |
| ! | TTTTGTATGTTTTGCAGTAC+TGG | + | chr2_2:66635400-66635419 | Msa0266200:intron | 30.0% |
| AACCTAAAAACTCAGAAAAC+TGG | + | chr2_2:66635464-66635483 | Msa0266200:CDS | 30.0% | |
| ACCTAAAAACTCAGAAAACT+GGG | + | chr2_2:66635465-66635484 | Msa0266200:CDS | 30.0% | |
| ATAAAGCATGAAGTTTCTCA+AGG | + | chr2_2:66635535-66635554 | Msa0266200:CDS | 30.0% | |
| ! | TCTCAAGGTGAGAATTTTTA+TGG | + | chr2_2:66635550-66635569 | Msa0266200:CDS | 30.0% |
| ! | GAGAATTTTTATGGTCAACA+AGG | + | chr2_2:66635559-66635578 | Msa0266200:CDS | 30.0% |
| ATTGGATTTCACTTACAACA+AGG | + | chr2_2:66635696-66635715 | Msa0266200:CDS | 30.0% | |
| TTTACCTCAGATATTTGATC+TGG | - | chr2_2:66635745-66635764 | None:intergenic | 30.0% | |
| AACTACTGGAGTTAATAAGA+AGG | + | chr2_2:66635941-66635960 | Msa0266200:CDS | 30.0% | |
| TGTGAGTAATTAACCTTTAG+AGG | - | chr2_2:66635996-66636015 | None:intergenic | 30.0% | |
| !! | TAGTTTGTTACCTTTCCAAA+TGG | - | chr2_2:66636326-66636345 | None:intergenic | 30.0% |
| AACAACTACTATTTCATGTG+TGG | - | chr2_2:66636410-66636429 | None:intergenic | 30.0% | |
| AAAGATAGGTACACAGAAAT+TGG | - | chr2_2:66636459-66636478 | None:intergenic | 30.0% | |
| AAGAAAGAAAGATGAGTCTT+TGG | + | chr2_2:66636519-66636538 | Msa0266200:intron | 30.0% | |
| TCTGTATTATTAGAAGCCAT+TGG | + | chr2_2:66636570-66636589 | Msa0266200:CDS | 30.0% | |
| TCAGAGAAAAGTGAAACATT+GGG | - | chr2_2:66636876-66636895 | None:intergenic | 30.0% | |
| TTCAGAGAAAAGTGAAACAT+TGG | - | chr2_2:66636877-66636896 | None:intergenic | 30.0% | |
| GTAGTAATAACTGTAAAGAG+AGG | - | chr2_2:66637137-66637156 | None:intergenic | 30.0% | |
| AAAGAAAAGAATACCTGGTT+TGG | - | chr2_2:66637404-66637423 | None:intergenic | 30.0% | |
| ACTAAAATCATGATTCCATG+GGG | - | chr2_2:66637445-66637464 | None:intergenic | 30.0% | |
| ! | ATGCACTTGATGATACTATA+TGG | - | chr2_2:66637610-66637629 | None:intergenic | 30.0% |
| GTATCATCAAGTGCATAAAT+TGG | + | chr2_2:66637614-66637633 | Msa0266200:intron | 30.0% | |
| ! | TGAATTTTCTGTGAGTTGTT+AGG | + | chr2_2:66637706-66637725 | Msa0266200:intron | 30.0% |
| TATGGTTGATCATCAATAAC+TGG | + | chr2_2:66638062-66638081 | Msa0266200:three_prime_UTR | 30.0% | |
| CCAAACAAGACTTTGGATAA+AGG | - | chr2_2:66634805-66634824 | None:intergenic | 35.0% | |
| !! | CCTTTATCCAAAGTCTTGTT+TGG | + | chr2_2:66634802-66634821 | Msa0266200:five_prime_UTR | 35.0% |
| TATATGTGTAAGGACTAAGG+AGG | - | chr2_2:66634949-66634968 | None:intergenic | 35.0% | |
| TGATCCATTGTAGCAAATGA+TGG | + | chr2_2:66634981-66635000 | Msa0266200:exon | 35.0% | |
| ATCCAAGCATATATTGAGGA+GGG | - | chr2_2:66635053-66635072 | None:intergenic | 35.0% | |
| GAAGATCCAAGCATATATTG+AGG | - | chr2_2:66635057-66635076 | None:intergenic | 35.0% | |
| !!! | CAAGCTACGGTTTTAAATTG+CGG | - | chr2_2:66635307-66635326 | None:intergenic | 35.0% |
| ! | TCCCAGTTTTCTGAGTTTTT+AGG | - | chr2_2:66635469-66635488 | None:intergenic | 35.0% |
| ATAGATGGAACTCTTGAAGA+TGG | - | chr2_2:66635508-66635527 | None:intergenic | 35.0% | |
| ATCTTCAAGAGTTCCATCTA+TGG | + | chr2_2:66635507-66635526 | Msa0266200:CDS | 35.0% | |
| ACTACCAGATCAAATATCTG+AGG | + | chr2_2:66635738-66635757 | Msa0266200:CDS | 35.0% | |
| TAGTGTAATAGCTCAACTAC+TGG | + | chr2_2:66635927-66635946 | Msa0266200:intron | 35.0% | |
| TGGAGTTAATAAGAAGGCTA+GGG | + | chr2_2:66635947-66635966 | Msa0266200:CDS | 35.0% | |
| ! | AATTAACCTTTAGAGGTGGT+TGG | - | chr2_2:66635989-66636008 | None:intergenic | 35.0% |
| ! | GAGTAATTAACCTTTAGAGG+TGG | - | chr2_2:66635993-66636012 | None:intergenic | 35.0% |
| TAGAAACCTGATGTATCCAA+TGG | - | chr2_2:66636589-66636608 | None:intergenic | 35.0% | |
| GTTTCTACAGAGTCAAATTG+AGG | + | chr2_2:66636602-66636621 | Msa0266200:CDS | 35.0% | |
| ! | TTATTCCTCTCTTTTGTTGC+AGG | + | chr2_2:66636774-66636793 | Msa0266200:intron | 35.0% |
| CAGCATCAAAAAACATGATG+AGG | + | chr2_2:66636824-66636843 | Msa0266200:CDS | 35.0% | |
| ! | TTTTATTCCCATCTAGCTGT+TGG | + | chr2_2:66637343-66637362 | Msa0266200:intron | 35.0% |
| !! | AAGAATACCTGGTTTGGAAT+TGG | - | chr2_2:66637398-66637417 | None:intergenic | 35.0% |
| AGCATTTGAACACATGTAGT+AGG | - | chr2_2:66637754-66637773 | None:intergenic | 35.0% | |
| ACAGAATGCAGAAGGTAATA+AGG | + | chr2_2:66637813-66637832 | Msa0266200:intron | 35.0% | |
| CAAAGAACTTGAAGAGTAGA+GGG | + | chr2_2:66637836-66637855 | Msa0266200:CDS | 35.0% | |
| CAACATGTTGGAAGTGAAAA+TGG | + | chr2_2:66637886-66637905 | Msa0266200:CDS | 35.0% | |
| TGAAAATGGAGCTGATTACT+GGG | + | chr2_2:66637900-66637919 | Msa0266200:CDS | 35.0% | |
| ! | GTCATTCTGTGGTAATGAAA+AGG | + | chr2_2:66638000-66638019 | Msa0266200:three_prime_UTR | 35.0% |
| TGTGCAACCAAACAAGACTT+TGG | - | chr2_2:66634812-66634831 | None:intergenic | 40.0% | |
| CTTGTTTGGTTGCACATACA+AGG | + | chr2_2:66634816-66634835 | Msa0266200:five_prime_UTR | 40.0% | |
| CATTGTAGCAAATGATGGCT+GGG | + | chr2_2:66634986-66635005 | Msa0266200:exon | 40.0% | |
| GGAGGGATATTCAAAGATGA+TGG | - | chr2_2:66635036-66635055 | None:intergenic | 40.0% | |
| ATCCCTCCTCAATATATGCT+TGG | + | chr2_2:66635048-66635067 | Msa0266200:CDS | 40.0% | |
| GATCCAAGCATATATTGAGG+AGG | - | chr2_2:66635054-66635073 | None:intergenic | 40.0% | |
| ! | AGTAGTTGACTCCATGATTG+AGG | - | chr2_2:66635126-66635145 | None:intergenic | 40.0% |
| GATGCTGTAACTTCAAGCTA+CGG | - | chr2_2:66635320-66635339 | None:intergenic | 40.0% | |
| TGGTTCATCTTGGTCACATA+TGG | + | chr2_2:66635621-66635640 | Msa0266200:CDS | 40.0% | |
| AGCTAGTGATATGAGAGCTT+GGG | - | chr2_2:66635660-66635679 | None:intergenic | 40.0% | |
| AAGCTAGTGATATGAGAGCT+TGG | - | chr2_2:66635661-66635680 | None:intergenic | 40.0% | |
| CTGGAGTTAATAAGAAGGCT+AGG | + | chr2_2:66635946-66635965 | Msa0266200:CDS | 40.0% | |
| ATGTGAATCTGAATCAGGTG+AGG | + | chr2_2:66636252-66636271 | Msa0266200:intron | 40.0% | |
| TTCCAAATGGAGAAACTAGC+TGG | - | chr2_2:66636313-66636332 | None:intergenic | 40.0% | |
| ! | GCTAGTTTCTCCATTTGGAA+AGG | + | chr2_2:66636313-66636332 | Msa0266200:CDS | 40.0% |
| TAGAAGCCATTGGATACATC+AGG | + | chr2_2:66636580-66636599 | Msa0266200:CDS | 40.0% | |
| TCCAATAAAGCATACCTGAC+CGG | - | chr2_2:66637067-66637086 | None:intergenic | 40.0% | |
| !! | TTGGAGCGCTCTTTCTTTTT+AGG | - | chr2_2:66637379-66637398 | None:intergenic | 40.0% |
| TCTGTGAGTTGTTAGGTCAT+TGG | + | chr2_2:66637713-66637732 | Msa0266200:intron | 40.0% | |
| GCAAAGAACTTGAAGAGTAG+AGG | + | chr2_2:66637835-66637854 | Msa0266200:CDS | 40.0% | |
| GTGAAAATGGAGCTGATTAC+TGG | + | chr2_2:66637899-66637918 | Msa0266200:CDS | 40.0% | |
| TAAAACCCACTTCCAAATGC+TGG | - | chr2_2:66637928-66637947 | None:intergenic | 40.0% | |
| ! | CCAGCCATCATTTGCTACAA+TGG | - | chr2_2:66634988-66635007 | None:intergenic | 45.0% |
| CCATTGTAGCAAATGATGGC+TGG | + | chr2_2:66634985-66635004 | Msa0266200:exon | 45.0% | |
| ! | CTGAAGTACCTCCTCAATCA+TGG | + | chr2_2:66635112-66635131 | Msa0266200:CDS | 45.0% |
| ! | AGTTGACTCCATGATTGAGG+AGG | - | chr2_2:66635123-66635142 | None:intergenic | 45.0% |
| AGAGAGAGAGAGAGAGAGTA+TGG | - | chr2_2:66635162-66635181 | None:intergenic | 45.0% | |
| !! | TTTTGCAGTACTGGACTACC+TGG | + | chr2_2:66635409-66635428 | Msa0266200:intron | 45.0% |
| CTGGATCACTTGGTTCATCT+TGG | + | chr2_2:66635611-66635630 | Msa0266200:CDS | 45.0% | |
| GCTAGTGATATGAGAGCTTG+GGG | - | chr2_2:66635659-66635678 | None:intergenic | 45.0% | |
| TTCAAGCCAACCACCTCTAA+AGG | + | chr2_2:66635980-66635999 | Msa0266200:CDS | 45.0% | |
| GAATCTGAATCAGGTGAGGA+AGG | + | chr2_2:66636256-66636275 | Msa0266200:intron | 45.0% | |
| ! | CACCAGCTAGTTTCTCCATT+TGG | + | chr2_2:66636308-66636327 | Msa0266200:CDS | 45.0% |
| ATGCTGCAGTGTCCAAGTAA+GGG | - | chr2_2:66636810-66636829 | None:intergenic | 45.0% | |
| TCTGTATTTCCTGAAGACCC+CGG | + | chr2_2:66637045-66637064 | Msa0266200:CDS | 45.0% | |
| CAATAAAGCATACCTGACCG+GGG | - | chr2_2:66637065-66637084 | None:intergenic | 45.0% | |
| CCAATAAAGCATACCTGACC+GGG | - | chr2_2:66637066-66637085 | None:intergenic | 45.0% | |
| GTGTCATCCAACAGCTAGAT+GGG | - | chr2_2:66637353-66637372 | None:intergenic | 45.0% | |
| AGTGTCATCCAACAGCTAGA+TGG | - | chr2_2:66637354-66637373 | None:intergenic | 45.0% | |
| ATCTAGCTGTTGGATGACAC+TGG | + | chr2_2:66637353-66637372 | Msa0266200:intron | 45.0% | |
| TTTCTACAAAAGCTGCCCCA+TGG | + | chr2_2:66637427-66637446 | Msa0266200:intron | 45.0% | |
| ACATGTTGTGTGCATGACAC+TGG | - | chr2_2:66637874-66637893 | None:intergenic | 45.0% | |
| GTGTCATGCACACAACATGT+TGG | + | chr2_2:66637874-66637893 | Msa0266200:CDS | 45.0% | |
| CATCATGAGCAGTCATTCTG+TGG | + | chr2_2:66637989-66638008 | Msa0266200:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTTGA+AGG | + | chr2_2:66635785-66635804 | Msa0266200:intron | 5.0% |
| !! | ATAAATAAATAAGAATAATA+TGG | - | chr2_2:66636636-66636655 | None:intergenic | 5.0% |
| !! | TTCAATATATATATATATAT+AGG | - | chr2_2:66637489-66637508 | None:intergenic | 5.0% |
| GATGCATGCTCCACCAGTTA+GGG | - | chr2_2:66635014-66635033 | None:intergenic | 50.0% | |
| CCAAGTCTCTCTTCTTCACC+AGG | - | chr2_2:66635430-66635449 | None:intergenic | 50.0% | |
| CCTGGTGAAGAAGAGAGACT+TGG | + | chr2_2:66635427-66635446 | Msa0266200:CDS | 50.0% | |
| !! | TCAACAAGGGCATCATCCTG+AGG | + | chr2_2:66635573-66635592 | Msa0266200:CDS | 50.0% |
| GAGTTAGCACGAAACTCCTC+AGG | - | chr2_2:66635592-66635611 | None:intergenic | 50.0% | |
| GAGGAGTTTCGTGCTAACTC+TGG | + | chr2_2:66635592-66635611 | Msa0266200:CDS | 50.0% | |
| CGTGCTAACTCTGGATCACT+TGG | + | chr2_2:66635601-66635620 | Msa0266200:CDS | 50.0% | |
| TGAGAGCTTGGGGAAGAAAC+TGG | - | chr2_2:66635649-66635668 | None:intergenic | 50.0% | |
| !! | AGAGGTGGTTGGCTTGAAGA+TGG | - | chr2_2:66635978-66635997 | None:intergenic | 50.0% |
| GAGTGCCTGCAACAAAAGAG+AGG | - | chr2_2:66636782-66636801 | None:intergenic | 50.0% | |
| TGCTGCAGTGTCCAAGTAAG+GGG | - | chr2_2:66636809-66636828 | None:intergenic | 50.0% | |
| GATGCTGCAGTGTCCAAGTA+AGG | - | chr2_2:66636811-66636830 | None:intergenic | 50.0% | |
| CCCGGTCAGGTATGCTTTAT+TGG | + | chr2_2:66637063-66637082 | Msa0266200:intron | 50.0% | |
| GAAGAGTAGAGGGTTGTGCT+TGG | + | chr2_2:66637846-66637865 | Msa0266200:CDS | 50.0% | |
| GATTACTGGGCACCAGCATT+TGG | + | chr2_2:66637913-66637932 | Msa0266200:CDS | 50.0% | |
| TGATGGCTGGGAACCCTAAC+TGG | + | chr2_2:66634998-66635017 | Msa0266200:CDS | 55.0% | |
| GGATGCATGCTCCACCAGTT+AGG | - | chr2_2:66635015-66635034 | None:intergenic | 55.0% | |
| CAGGTGAGGAAGGAGAAGCT+AGG | + | chr2_2:66636266-66636285 | Msa0266200:intron | 55.0% | |
| ATTTCCTGAAGACCCCGGTC+AGG | + | chr2_2:66637050-66637069 | Msa0266200:CDS | 55.0% | |
| GAGCGCTCCAATTCCAAACC+AGG | + | chr2_2:66637388-66637407 | Msa0266200:CDS | 55.0% | |
| TGGGCACCAGCATTTGGAAG+TGG | + | chr2_2:66637919-66637938 | Msa0266200:CDS | 55.0% | |
| GGGCACCAGCATTTGGAAGT+GGG | + | chr2_2:66637920-66637939 | Msa0266200:CDS | 55.0% | |
| TGGCTGGGAACCCTAACTGG+TGG | + | chr2_2:66635001-66635020 | Msa0266200:CDS | 60.0% | |
| GGCACTCAGCACCCCTTACT+TGG | + | chr2_2:66636795-66636814 | Msa0266200:intron | 60.0% | |
| CATACCTGACCGGGGTCTTC+AGG | - | chr2_2:66637057-66637076 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 66634741 | 66638278 | 66634741 | ID=Msa0266200;Name=Msa0266200 |
| chr2_2 | mRNA | 66634741 | 66638278 | 66634741 | ID=Msa0266200-mRNA-1;Parent=Msa0266200;Name=Msa0266200-mRNA-1;_AED=0.13;_eAED=0.13;_QI=256|1|1|1|1|1|9|330|329 |
| chr2_2 | exon | 66634741 | 66635148 | 66634741 | ID=Msa0266200-mRNA-1:exon:21195;Parent=Msa0266200-mRNA-1 |
| chr2_2 | exon | 66635417 | 66635759 | 66635417 | ID=Msa0266200-mRNA-1:exon:21196;Parent=Msa0266200-mRNA-1 |
| chr2_2 | exon | 66635930 | 66636001 | 66635930 | ID=Msa0266200-mRNA-1:exon:21197;Parent=Msa0266200-mRNA-1 |
| chr2_2 | exon | 66636269 | 66636334 | 66636269 | ID=Msa0266200-mRNA-1:exon:21198;Parent=Msa0266200-mRNA-1 |
| chr2_2 | exon | 66636558 | 66636623 | 66636558 | ID=Msa0266200-mRNA-1:exon:21199;Parent=Msa0266200-mRNA-1 |
| chr2_2 | exon | 66636796 | 66636858 | 66636796 | ID=Msa0266200-mRNA-1:exon:21200;Parent=Msa0266200-mRNA-1 |
| chr2_2 | exon | 66637027 | 66637071 | 66637027 | ID=Msa0266200-mRNA-1:exon:21201;Parent=Msa0266200-mRNA-1 |
| chr2_2 | exon | 66637359 | 66637409 | 66637359 | ID=Msa0266200-mRNA-1:exon:21202;Parent=Msa0266200-mRNA-1 |
| chr2_2 | exon | 66637817 | 66638278 | 66637817 | ID=Msa0266200-mRNA-1:exon:21203;Parent=Msa0266200-mRNA-1 |
| chr2_2 | five_prime_UTR | 66634741 | 66634996 | 66634741 | ID=Msa0266200-mRNA-1:five_prime_utr;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66634997 | 66635148 | 66634997 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66635417 | 66635759 | 66635417 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66635930 | 66636001 | 66635930 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66636269 | 66636334 | 66636269 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66636558 | 66636623 | 66636558 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66636796 | 66636858 | 66636796 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66637027 | 66637071 | 66637027 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66637359 | 66637409 | 66637359 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | CDS | 66637817 | 66637948 | 66637817 | ID=Msa0266200-mRNA-1:cds;Parent=Msa0266200-mRNA-1 |
| chr2_2 | three_prime_UTR | 66637949 | 66638278 | 66637949 | ID=Msa0266200-mRNA-1:three_prime_utr;Parent=Msa0266200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
