Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568680 | XP_003630160.2 | 99.773 | 441 | 1 | 0 | 1 | 441 | 1 | 441 | 0.0 | 899 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568680 | sp|Q9FIB6|PS12A_ARATH | 81.179 | 441 | 82 | 1 | 1 | 440 | 1 | 441 | 0.0 | 728 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568680 | B7FLC5 | 99.773 | 441 | 1 | 0 | 1 | 441 | 1 | 441 | 0.0 | 899 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002680 | Msa0568680 | 0.814767 | 1.303018e-51 | -8.615850e-47 |
Msa0002710 | Msa0568680 | 0.835273 | 1.846922e-56 | -8.615850e-47 |
Msa0003400 | Msa0568680 | 0.806886 | 6.616405e-50 | -8.615850e-47 |
Msa0006110 | Msa0568680 | 0.852461 | 4.547432e-61 | -8.615850e-47 |
Msa0015120 | Msa0568680 | 0.822503 | 2.287258e-53 | -8.615850e-47 |
Msa0023330 | Msa0568680 | 0.836259 | 1.039021e-56 | -8.615850e-47 |
Msa0026910 | Msa0568680 | 0.808347 | 3.238352e-50 | -8.615850e-47 |
Msa0030300 | Msa0568680 | 0.811638 | 6.333755e-51 | -8.615850e-47 |
Msa0031180 | Msa0568680 | 0.829502 | 4.965739e-55 | -8.615850e-47 |
Msa0032470 | Msa0568680 | 0.808236 | 3.419409e-50 | -8.615850e-47 |
Msa0036140 | Msa0568680 | 0.827599 | 1.431107e-54 | -8.615850e-47 |
Msa0041960 | Msa0568680 | 0.805972 | 1.031212e-49 | -8.615850e-47 |
Msa0043500 | Msa0568680 | 0.814545 | 1.458927e-51 | -8.615850e-47 |
Msa0043980 | Msa0568680 | 0.807545 | 4.797384e-50 | -8.615850e-47 |
Msa0044090 | Msa0568680 | 0.812604 | 3.899396e-51 | -8.615850e-47 |
Msa0045340 | Msa0568680 | 0.814546 | 1.458269e-51 | -8.615850e-47 |
Msa0045790 | Msa0568680 | 0.800420 | 1.453320e-48 | -8.615850e-47 |
Msa0047640 | Msa0568680 | 0.801017 | 1.097879e-48 | -8.615850e-47 |
Msa0050820 | Msa0568680 | 0.800894 | 1.163612e-48 | -8.615850e-47 |
Msa0051630 | Msa0568680 | 0.833700 | 4.587269e-56 | -8.615850e-47 |
Msa0051740 | Msa0568680 | 0.843176 | 1.645671e-58 | -8.615850e-47 |
Msa0051750 | Msa0568680 | 0.821545 | 3.814174e-53 | -8.615850e-47 |
Msa0053760 | Msa0568680 | 0.817468 | 3.246400e-52 | -8.615850e-47 |
Msa0054820 | Msa0568680 | 0.853564 | 2.198272e-61 | -8.615850e-47 |
Msa0056450 | Msa0568680 | 0.837965 | 3.807780e-57 | -8.615850e-47 |
Msa0064290 | Msa0568680 | 0.827794 | 1.284626e-54 | -8.615850e-47 |
Msa0065680 | Msa0568680 | -0.820783 | 5.714944e-53 | -8.615850e-47 |
Msa0078480 | Msa0568680 | 0.812155 | 4.888801e-51 | -8.615850e-47 |
Msa0081650 | Msa0568680 | 0.835111 | 2.029779e-56 | -8.615850e-47 |
Msa0084080 | Msa0568680 | 0.801460 | 8.909020e-49 | -8.615850e-47 |
Msa0085370 | Msa0568680 | 0.803661 | 3.134262e-49 | -8.615850e-47 |
Msa0089980 | Msa0568680 | 0.821390 | 4.141628e-53 | -8.615850e-47 |
Msa0090010 | Msa0568680 | 0.818781 | 1.639035e-52 | -8.615850e-47 |
Msa0096580 | Msa0568680 | 0.803122 | 4.053380e-49 | -8.615850e-47 |
Msa0099620 | Msa0568680 | 0.805443 | 1.331745e-49 | -8.615850e-47 |
Msa0099650 | Msa0568680 | 0.823798 | 1.140715e-53 | -8.615850e-47 |
Msa0100160 | Msa0568680 | 0.849209 | 3.745069e-60 | -8.615850e-47 |
Msa0101270 | Msa0568680 | 0.802716 | 4.917450e-49 | -8.615850e-47 |
Msa0104230 | Msa0568680 | 0.817782 | 2.758621e-52 | -8.615850e-47 |
Msa0104670 | Msa0568680 | 0.810541 | 1.094963e-50 | -8.615850e-47 |
Msa0106620 | Msa0568680 | 0.817521 | 3.158527e-52 | -8.615850e-47 |
Msa0106710 | Msa0568680 | 0.810527 | 1.102590e-50 | -8.615850e-47 |
Msa0115560 | Msa0568680 | 0.818137 | 2.293222e-52 | -8.615850e-47 |
Msa0116790 | Msa0568680 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
Msa0117520 | Msa0568680 | 0.800272 | 1.557790e-48 | -8.615850e-47 |
Msa0127020 | Msa0568680 | 0.804474 | 2.123053e-49 | -8.615850e-47 |
Msa0127850 | Msa0568680 | 0.802525 | 5.383927e-49 | -8.615850e-47 |
Msa0138020 | Msa0568680 | 0.824433 | 8.093601e-54 | -8.615850e-47 |
Msa0138360 | Msa0568680 | 0.804192 | 2.430404e-49 | -8.615850e-47 |
Msa0138750 | Msa0568680 | 0.820719 | 5.912586e-53 | -8.615850e-47 |
Msa0141400 | Msa0568680 | 0.835467 | 1.649848e-56 | -8.615850e-47 |
Msa0143850 | Msa0568680 | 0.808665 | 2.770637e-50 | -8.615850e-47 |
Msa0148080 | Msa0568680 | 0.800293 | 1.542633e-48 | -8.615850e-47 |
Msa0168870 | Msa0568680 | 0.829653 | 4.562813e-55 | -8.615850e-47 |
Msa0169280 | Msa0568680 | 0.806645 | 7.437316e-50 | -8.615850e-47 |
Msa0171120 | Msa0568680 | 0.805148 | 1.535172e-49 | -8.615850e-47 |
Msa0183760 | Msa0568680 | 0.823527 | 1.319993e-53 | -8.615850e-47 |
Msa0186950 | Msa0568680 | 0.800537 | 1.375609e-48 | -8.615850e-47 |
Msa0187490 | Msa0568680 | 0.802011 | 6.868748e-49 | -8.615850e-47 |
Msa0205010 | Msa0568680 | 0.834403 | 3.058797e-56 | -8.615850e-47 |
Msa0206010 | Msa0568680 | 0.810644 | 1.040168e-50 | -8.615850e-47 |
Msa0207040 | Msa0568680 | -0.813874 | 2.052592e-51 | -8.615850e-47 |
Msa0218350 | Msa0568680 | 0.809869 | 1.529058e-50 | -8.615850e-47 |
Msa0221470 | Msa0568680 | 0.808132 | 3.599329e-50 | -8.615850e-47 |
Msa0224390 | Msa0568680 | 0.818160 | 2.266303e-52 | -8.615850e-47 |
Msa0224420 | Msa0568680 | 0.815400 | 9.425597e-52 | -8.615850e-47 |
Msa0225220 | Msa0568680 | 0.854539 | 1.150771e-61 | -8.615850e-47 |
Msa0225670 | Msa0568680 | 0.819249 | 1.282451e-52 | -8.615850e-47 |
Msa0230610 | Msa0568680 | 0.821317 | 4.305528e-53 | -8.615850e-47 |
Msa0231060 | Msa0568680 | 0.823291 | 1.499187e-53 | -8.615850e-47 |
Msa0232020 | Msa0568680 | 0.804095 | 2.545999e-49 | -8.615850e-47 |
Msa0233370 | Msa0568680 | 0.800192 | 1.617205e-48 | -8.615850e-47 |
Msa0237200 | Msa0568680 | 0.824799 | 6.634652e-54 | -8.615850e-47 |
Msa0237210 | Msa0568680 | 0.802981 | 4.334963e-49 | -8.615850e-47 |
Msa0372810 | Msa0568680 | 0.803284 | 3.752356e-49 | -8.615850e-47 |
Msa0376910 | Msa0568680 | 0.809089 | 2.247584e-50 | -8.615850e-47 |
Msa0378970 | Msa0568680 | 0.868699 | 5.376822e-66 | -8.615850e-47 |
Msa0387050 | Msa0568680 | 0.821666 | 3.575977e-53 | -8.615850e-47 |
Msa0389910 | Msa0568680 | 0.821972 | 3.038321e-53 | -8.615850e-47 |
Msa0395980 | Msa0568680 | 0.802751 | 4.834294e-49 | -8.615850e-47 |
Msa0406770 | Msa0568680 | 0.828964 | 6.706013e-55 | -8.615850e-47 |
Msa0410840 | Msa0568680 | 0.820714 | 5.928370e-53 | -8.615850e-47 |
Msa0428580 | Msa0568680 | 0.854628 | 1.084179e-61 | -8.615850e-47 |
Msa0428920 | Msa0568680 | 0.803365 | 3.609931e-49 | -8.615850e-47 |
Msa0430060 | Msa0568680 | 0.812527 | 4.053183e-51 | -8.615850e-47 |
Msa0430150 | Msa0568680 | 0.805380 | 1.372845e-49 | -8.615850e-47 |
Msa0431210 | Msa0568680 | 0.804861 | 1.762822e-49 | -8.615850e-47 |
Msa0432160 | Msa0568680 | 0.801753 | 7.760839e-49 | -8.615850e-47 |
Msa0432170 | Msa0568680 | 0.812357 | 4.415161e-51 | -8.615850e-47 |
Msa0436760 | Msa0568680 | 0.841497 | 4.583769e-58 | -8.615850e-47 |
Msa0452710 | Msa0568680 | 0.804477 | 2.120237e-49 | -8.615850e-47 |
Msa0468250 | Msa0568680 | 0.810015 | 1.422245e-50 | -8.615850e-47 |
Msa0468320 | Msa0568680 | 0.807764 | 4.309849e-50 | -8.615850e-47 |
Msa0468800 | Msa0568680 | 0.814196 | 1.742411e-51 | -8.615850e-47 |
Msa0471550 | Msa0568680 | 0.809486 | 1.848054e-50 | -8.615850e-47 |
Msa0471580 | Msa0568680 | 0.804882 | 1.744755e-49 | -8.615850e-47 |
Msa0471900 | Msa0568680 | 0.802622 | 5.141576e-49 | -8.615850e-47 |
Msa0474940 | Msa0568680 | 0.871401 | 7.031340e-67 | -8.615850e-47 |
Msa0476680 | Msa0568680 | 0.805103 | 1.569082e-49 | -8.615850e-47 |
Msa0479170 | Msa0568680 | 0.805117 | 1.558643e-49 | -8.615850e-47 |
Msa0480780 | Msa0568680 | 0.843224 | 1.598027e-58 | -8.615850e-47 |
Msa0481030 | Msa0568680 | 0.823371 | 1.435770e-53 | -8.615850e-47 |
Msa0481530 | Msa0568680 | 0.806688 | 7.283208e-50 | -8.615850e-47 |
Msa0239480 | Msa0568680 | 0.808389 | 3.172926e-50 | -8.615850e-47 |
Msa0240300 | Msa0568680 | 0.819709 | 1.007358e-52 | -8.615850e-47 |
Msa0240900 | Msa0568680 | 0.807200 | 5.677726e-50 | -8.615850e-47 |
Msa0241140 | Msa0568680 | 0.802254 | 6.121799e-49 | -8.615850e-47 |
Msa0246070 | Msa0568680 | 0.808607 | 2.850723e-50 | -8.615850e-47 |
Msa0254790 | Msa0568680 | 0.814633 | 1.394640e-51 | -8.615850e-47 |
Msa0267370 | Msa0568680 | 0.800232 | 1.586958e-48 | -8.615850e-47 |
Msa0274970 | Msa0568680 | 0.829151 | 6.043533e-55 | -8.615850e-47 |
Msa0274980 | Msa0568680 | 0.818362 | 2.039007e-52 | -8.615850e-47 |
Msa0287410 | Msa0568680 | 0.808388 | 3.174493e-50 | -8.615850e-47 |
Msa0287780 | Msa0568680 | 0.800342 | 1.507521e-48 | -8.615850e-47 |
Msa0294060 | Msa0568680 | 0.809404 | 1.923907e-50 | -8.615850e-47 |
Msa0307310 | Msa0568680 | 0.809228 | 2.099430e-50 | -8.615850e-47 |
Msa0311720 | Msa0568680 | 0.830350 | 3.086044e-55 | -8.615850e-47 |
Msa0315680 | Msa0568680 | 0.833308 | 5.745035e-56 | -8.615850e-47 |
Msa0315690 | Msa0568680 | 0.820559 | 6.434589e-53 | -8.615850e-47 |
Msa0317730 | Msa0568680 | 0.804127 | 2.507885e-49 | -8.615850e-47 |
Msa0317970 | Msa0568680 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
Msa0324240 | Msa0568680 | 0.823944 | 1.054213e-53 | -8.615850e-47 |
Msa0326110 | Msa0568680 | 0.812997 | 3.198556e-51 | -8.615850e-47 |
Msa0330340 | Msa0568680 | 0.814652 | 1.381456e-51 | -8.615850e-47 |
Msa0339910 | Msa0568680 | 0.804555 | 2.042211e-49 | -8.615850e-47 |
Msa0341540 | Msa0568680 | 0.805655 | 1.202230e-49 | -8.615850e-47 |
Msa0342010 | Msa0568680 | 0.856537 | 3.009799e-62 | -8.615850e-47 |
Msa0347950 | Msa0568680 | 0.807556 | 4.770881e-50 | -8.615850e-47 |
Msa0347990 | Msa0568680 | 0.802389 | 5.742879e-49 | -8.615850e-47 |
Msa0358400 | Msa0568680 | 0.818627 | 1.776086e-52 | -8.615850e-47 |
Msa0360210 | Msa0568680 | 0.831305 | 1.800339e-55 | -8.615850e-47 |
Msa0363400 | Msa0568680 | 0.809191 | 2.137617e-50 | -8.615850e-47 |
Msa0363790 | Msa0568680 | 0.816301 | 5.935490e-52 | -8.615850e-47 |
Msa0483740 | Msa0568680 | 0.804491 | 2.105926e-49 | -8.615850e-47 |
Msa0484720 | Msa0568680 | 0.804896 | 1.733162e-49 | -8.615850e-47 |
Msa0485490 | Msa0568680 | 0.814765 | 1.303856e-51 | -8.615850e-47 |
Msa0487720 | Msa0568680 | 0.806115 | 9.619227e-50 | -8.615850e-47 |
Msa0500470 | Msa0568680 | 0.814025 | 1.900876e-51 | -8.615850e-47 |
Msa0518380 | Msa0568680 | 0.800799 | 1.216352e-48 | -8.615850e-47 |
Msa0518440 | Msa0568680 | 0.833666 | 4.677886e-56 | -8.615850e-47 |
Msa0521010 | Msa0568680 | 0.802644 | 5.086566e-49 | -8.615850e-47 |
Msa0521020 | Msa0568680 | 0.804755 | 1.854844e-49 | -8.615850e-47 |
Msa0526020 | Msa0568680 | 0.824192 | 9.219173e-54 | -8.615850e-47 |
Msa0527190 | Msa0568680 | 0.813964 | 1.960138e-51 | -8.615850e-47 |
Msa0529890 | Msa0568680 | 0.814726 | 1.330086e-51 | -8.615850e-47 |
Msa0531180 | Msa0568680 | 0.824690 | 7.041210e-54 | -8.615850e-47 |
Msa0531250 | Msa0568680 | 0.813911 | 2.013487e-51 | -8.615850e-47 |
Msa0532980 | Msa0568680 | 0.836630 | 8.363557e-57 | -8.615850e-47 |
Msa0538910 | Msa0568680 | 0.802092 | 6.609713e-49 | -8.615850e-47 |
Msa0544730 | Msa0568680 | 0.824561 | 7.549304e-54 | -8.615850e-47 |
Msa0553200 | Msa0568680 | 0.806182 | 9.312960e-50 | -8.615850e-47 |
Msa0557320 | Msa0568680 | 0.807670 | 4.513680e-50 | -8.615850e-47 |
Msa0559500 | Msa0568680 | 0.814557 | 1.450336e-51 | -8.615850e-47 |
Msa0560500 | Msa0568680 | 0.812653 | 3.804109e-51 | -8.615850e-47 |
Msa0562570 | Msa0568680 | 0.820681 | 6.033171e-53 | -8.615850e-47 |
Msa0562690 | Msa0568680 | 0.815195 | 1.046993e-51 | -8.615850e-47 |
Msa0566350 | Msa0568680 | 0.814104 | 1.825773e-51 | -8.615850e-47 |
Msa0566750 | Msa0568680 | 0.832214 | 1.074121e-55 | -8.615850e-47 |
Msa0568680 | Msa0571130 | 0.803239 | 3.833358e-49 | -8.615850e-47 |
Msa0568680 | Msa0571780 | 0.810799 | 9.629118e-51 | -8.615850e-47 |
Msa0568680 | Msa0574390 | 0.869578 | 2.787403e-66 | -8.615850e-47 |
Msa0568680 | Msa0574730 | 0.813626 | 2.327644e-51 | -8.615850e-47 |
Msa0568680 | Msa0576680 | 0.842971 | 1.866480e-58 | -8.615850e-47 |
Msa0568680 | Msa0585560 | 0.815472 | 9.085257e-52 | -8.615850e-47 |
Msa0568680 | Msa0588090 | 0.842457 | 2.555926e-58 | -8.615850e-47 |
Msa0568680 | Msa0598160 | 0.836648 | 8.271360e-57 | -8.615850e-47 |
Msa0568680 | Msa0600070 | 0.802463 | 5.544442e-49 | -8.615850e-47 |
Msa0568680 | Msa0608270 | 0.801536 | 8.596915e-49 | -8.615850e-47 |
Msa0568680 | Msa0610250 | 0.810466 | 1.136953e-50 | -8.615850e-47 |
Msa0568680 | Msa0613710 | 0.823435 | 1.386985e-53 | -8.615850e-47 |
Msa0568680 | Msa0614510 | 0.829731 | 4.367474e-55 | -8.615850e-47 |
Msa0568680 | Msa0618950 | 0.838850 | 2.250734e-57 | -8.615850e-47 |
Msa0568680 | Msa0618970 | 0.834177 | 3.484178e-56 | -8.615850e-47 |
Msa0568680 | Msa0622120 | 0.824537 | 7.647875e-54 | -8.615850e-47 |
Msa0568680 | Msa0624060 | 0.831074 | 2.051131e-55 | -8.615850e-47 |
Msa0568680 | Msa0625720 | 0.812483 | 4.144111e-51 | -8.615850e-47 |
Msa0568680 | Msa0628420 | 0.818883 | 1.553870e-52 | -8.615850e-47 |
Msa0568680 | Msa0629430 | 0.814793 | 1.285552e-51 | -8.615850e-47 |
Msa0568680 | Msa0637900 | 0.854543 | 1.147877e-61 | -8.615850e-47 |
Msa0568680 | Msa0642730 | 0.816891 | 4.376313e-52 | -8.615850e-47 |
Msa0568680 | Msa0648830 | 0.807787 | 4.262298e-50 | -8.615850e-47 |
Msa0568680 | Msa0652690 | 0.849908 | 2.390366e-60 | -8.615850e-47 |
Msa0568680 | Msa0658590 | 0.803339 | 3.654219e-49 | -8.615850e-47 |
Msa0568680 | Msa0661320 | 0.843407 | 1.428433e-58 | -8.615850e-47 |
Msa0568680 | Msa0663390 | 0.807551 | 4.782642e-50 | -8.615850e-47 |
Msa0568680 | Msa0667050 | 0.806988 | 6.294550e-50 | -8.615850e-47 |
Msa0568680 | Msa0667770 | 0.849001 | 4.278001e-60 | -8.615850e-47 |
Msa0568680 | Msa0667790 | 0.832991 | 6.891329e-56 | -8.615850e-47 |
Msa0568680 | Msa0673120 | 0.819782 | 9.694166e-53 | -8.615850e-47 |
Msa0568680 | Msa0676130 | 0.822763 | 1.990523e-53 | -8.615850e-47 |
Msa0568680 | Msa0676180 | 0.828584 | 8.288451e-55 | -8.615850e-47 |
Msa0568680 | Msa0679020 | 0.845338 | 4.321071e-59 | -8.615850e-47 |
Msa0568680 | Msa0686080 | 0.823005 | 1.748364e-53 | -8.615850e-47 |
Msa0568680 | Msa0689250 | 0.860945 | 1.449964e-63 | -8.615850e-47 |
Msa0568680 | Msa0691290 | 0.802707 | 4.936488e-49 | -8.615850e-47 |
Msa0568680 | Msa0698100 | 0.811231 | 7.762704e-51 | -8.615850e-47 |
Msa0568680 | Msa0705190 | 0.823852 | 1.108040e-53 | -8.615850e-47 |
Msa0568680 | Msa0705390 | 0.837293 | 5.660896e-57 | -8.615850e-47 |
Msa0568680 | Msa0716960 | 0.818125 | 2.307487e-52 | -8.615850e-47 |
Msa0568680 | Msa0717010 | 0.811386 | 7.185303e-51 | -8.615850e-47 |
Msa0568680 | Msa0717890 | 0.803396 | 3.556115e-49 | -8.615850e-47 |
Msa0568680 | Msa0741070 | 0.813053 | 3.110307e-51 | -8.615850e-47 |
Msa0568680 | Msa0741440 | 0.811511 | 6.750117e-51 | -8.615850e-47 |
Msa0568680 | Msa0753160 | 0.808765 | 2.636616e-50 | -8.615850e-47 |
Msa0568680 | Msa0756110 | 0.809105 | 2.229870e-50 | -8.615850e-47 |
Msa0568680 | Msa0756380 | 0.802347 | 5.857202e-49 | -8.615850e-47 |
Msa0568680 | Msa0756540 | 0.820037 | 8.473146e-53 | -8.615850e-47 |
Msa0568680 | Msa0763890 | 0.827985 | 1.156205e-54 | -8.615850e-47 |
Msa0568680 | Msa0763920 | 0.828566 | 8.370149e-55 | -8.615850e-47 |
Msa0568680 | Msa0786750 | 0.819481 | 1.135601e-52 | -8.615850e-47 |
Msa0568680 | Msa0797770 | 0.850877 | 1.278305e-60 | -8.615850e-47 |
Msa0568680 | Msa0797930 | 0.820107 | 8.169363e-53 | -8.615850e-47 |
Msa0568680 | Msa0800700 | 0.821424 | 4.067447e-53 | -8.615850e-47 |
Msa0568680 | Msa0817460 | 0.822313 | 2.533161e-53 | -8.615850e-47 |
Msa0568680 | Msa0817650 | 0.810629 | 1.048022e-50 | -8.615850e-47 |
Msa0568680 | Msa0818060 | 0.815371 | 9.567607e-52 | -8.615850e-47 |
Msa0568680 | Msa0821190 | 0.804570 | 2.027681e-49 | -8.615850e-47 |
Msa0568680 | Msa0822500 | 0.818920 | 1.523450e-52 | -8.615850e-47 |
Msa0568680 | Msa0835230 | 0.848874 | 4.640524e-60 | -8.615850e-47 |
Msa0568680 | Msa0835960 | 0.813462 | 2.528882e-51 | -8.615850e-47 |
Msa0568680 | Msa0844110 | 0.834514 | 2.868920e-56 | -8.615850e-47 |
Msa0568680 | Msa0868160 | 0.848079 | 7.700764e-60 | -8.615850e-47 |
Msa0568680 | Msa0894710 | 0.811560 | 6.586358e-51 | -8.615850e-47 |
Msa0568680 | Msa0906690 | 0.814348 | 1.612442e-51 | -8.615850e-47 |
Msa0568680 | Msa0909770 | 0.811030 | 8.584189e-51 | -8.615850e-47 |
Msa0568680 | Msa0936390 | 0.848248 | 6.917144e-60 | -8.615850e-47 |
Msa0568680 | Msa0939000 | 0.817903 | 2.590561e-52 | -8.615850e-47 |
Msa0568680 | Msa0941190 | 0.802039 | 6.777074e-49 | -8.615850e-47 |
Msa0568680 | Msa0945240 | 0.848007 | 8.061986e-60 | -8.615850e-47 |
Msa0568680 | Msa0986510 | 0.806239 | 9.058992e-50 | -8.615850e-47 |
Msa0568680 | Msa1004840 | 0.806055 | 9.905177e-50 | -8.615850e-47 |
Msa0568680 | Msa1028280 | 0.803175 | 3.952512e-49 | -8.615850e-47 |
Msa0568680 | Msa1028590 | 0.804002 | 2.662517e-49 | -8.615850e-47 |
Msa0568680 | Msa1034500 | 0.817420 | 3.327983e-52 | -8.615850e-47 |
Msa0568680 | Msa1038080 | 0.813833 | 2.094874e-51 | -8.615850e-47 |
Msa0568680 | Msa1039710 | -0.806259 | 8.972374e-50 | -8.615850e-47 |
Msa0568680 | Msa1041210 | 0.800311 | 1.529936e-48 | -8.615850e-47 |
Msa0568680 | Msa1043130 | -0.805345 | 1.396406e-49 | -8.615850e-47 |
Msa0568680 | Msa1077070 | 0.801823 | 7.506369e-49 | -8.615850e-47 |
Msa0568680 | Msa1080640 | 0.809719 | 1.646867e-50 | -8.615850e-47 |
Msa0568680 | Msa1080740 | 0.809084 | 2.253541e-50 | -8.615850e-47 |
Msa0568680 | Msa1088410 | 0.839756 | 1.310015e-57 | -8.615850e-47 |
Msa0568680 | Msa1089320 | 0.811259 | 7.656002e-51 | -8.615850e-47 |
Msa0568680 | Msa1095650 | 0.802011 | 6.868969e-49 | -8.615850e-47 |
Msa0568680 | Msa1098400 | 0.813298 | 2.747207e-51 | -8.615850e-47 |
Msa0568680 | Msa1098420 | 0.805461 | 1.320325e-49 | -8.615850e-47 |
Msa0568680 | Msa1098890 | 0.803009 | 4.275814e-49 | -8.615850e-47 |
Msa0568680 | Msa1101090 | 0.805997 | 1.018709e-49 | -8.615850e-47 |
Msa0568680 | Msa1111380 | 0.825822 | 3.800803e-54 | -8.615850e-47 |
Msa0568680 | Msa1137780 | 0.837033 | 6.600185e-57 | -8.615850e-47 |
Msa0568680 | Msa1139890 | 0.805405 | 1.356257e-49 | -8.615850e-47 |
Msa0568680 | Msa1143850 | 0.807389 | 5.177692e-50 | -8.615850e-47 |
Msa0568680 | Msa1145810 | 0.843757 | 1.151512e-58 | -8.615850e-47 |
Msa0568680 | Msa1156260 | 0.814437 | 1.541677e-51 | -8.615850e-47 |
Msa0568680 | Msa1162780 | 0.810272 | 1.251989e-50 | -8.615850e-47 |
Msa0568680 | Msa1163090 | 0.810224 | 1.282099e-50 | -8.615850e-47 |
Msa0568680 | Msa1165740 | 0.804948 | 1.690618e-49 | -8.615850e-47 |
Msa0568680 | Msa1187200 | 0.800880 | 1.170831e-48 | -8.615850e-47 |
Msa0568680 | Msa1199570 | 0.820752 | 5.810998e-53 | -8.615850e-47 |
Msa0568680 | Msa1204530 | 0.819127 | 1.367266e-52 | -8.615850e-47 |
Msa0568680 | Msa1204630 | 0.807801 | 4.233496e-50 | -8.615850e-47 |
Msa0568680 | Msa1205370 | 0.808044 | 3.757847e-50 | -8.615850e-47 |
Msa0568680 | Msa1207310 | 0.824312 | 8.641233e-54 | -8.615850e-47 |
Msa0568680 | Msa1211340 | 0.823011 | 1.742463e-53 | -8.615850e-47 |
Msa0568680 | Msa1225600 | 0.821735 | 3.446987e-53 | -8.615850e-47 |
Msa0568680 | Msa1232700 | 0.806511 | 7.939736e-50 | -8.615850e-47 |
Msa0568680 | Msa1250290 | 0.830915 | 2.243578e-55 | -8.615850e-47 |
Msa0568680 | Msa1259640 | 0.829621 | 4.647276e-55 | -8.615850e-47 |
Msa0568680 | Msa1269890 | 0.807263 | 5.505963e-50 | -8.615850e-47 |
Msa0568680 | Msa1304940 | 0.825122 | 5.568147e-54 | -8.615850e-47 |
Msa0568680 | Msa1328640 | 0.805434 | 1.337425e-49 | -8.615850e-47 |
Msa0568680 | Msa1328710 | 0.822686 | 2.074185e-53 | -8.615850e-47 |
Msa0568680 | Msa1329790 | 0.826803 | 2.219601e-54 | -8.615850e-47 |
Msa0568680 | Msa1330170 | 0.806384 | 8.442531e-50 | -8.615850e-47 |
Msa0568680 | Msa1331000 | 0.820474 | 6.728068e-53 | -8.615850e-47 |
Msa0568680 | Msa1331320 | 0.814949 | 1.187034e-51 | -8.615850e-47 |
Msa0568680 | Msa1340200 | 0.809073 | 2.265889e-50 | -8.615850e-47 |
Msa0568680 | Msa1340810 | 0.800232 | 1.586958e-48 | -8.615850e-47 |
Msa0568680 | Msa1345810 | 0.804930 | 1.704840e-49 | -8.615850e-47 |
Msa0568680 | Msa1346840 | 0.805871 | 1.082757e-49 | -8.615850e-47 |
Msa0568680 | Msa1352280 | -0.819036 | 1.433784e-52 | -8.615850e-47 |
Msa0568680 | Msa1353980 | 0.800860 | 1.182270e-48 | -8.615850e-47 |
Msa0568680 | Msa1358240 | 0.834598 | 2.732211e-56 | -8.615850e-47 |
Msa0568680 | Msa1359560 | 0.843194 | 1.627957e-58 | -8.615850e-47 |
Msa0568680 | Msa1364210 | 0.811656 | 6.278081e-51 | -8.615850e-47 |
Msa0568680 | Msa1368430 | 0.829388 | 5.293591e-55 | -8.615850e-47 |
Msa0568680 | Msa1371640 | 0.803763 | 2.985108e-49 | -8.615850e-47 |
Msa0568680 | Msa1372150 | 0.800437 | 1.441558e-48 | -8.615850e-47 |
Msa0568680 | Msa1374470 | 0.835912 | 1.273134e-56 | -8.615850e-47 |
Msa0568680 | Msa1378410 | 0.834012 | 3.832058e-56 | -8.615850e-47 |
Msa0568680 | Msa1383230 | 0.817003 | 4.129914e-52 | -8.615850e-47 |
Msa0568680 | Msa1383530 | 0.804736 | 1.871974e-49 | -8.615850e-47 |
Msa0568680 | Msa1385810 | 0.803364 | 3.612100e-49 | -8.615850e-47 |
Msa0568680 | Msa1389880 | 0.824242 | 8.976689e-54 | -8.615850e-47 |
Msa0568680 | Msa1392790 | 0.822030 | 2.945855e-53 | -8.615850e-47 |
Msa0568680 | Msa1393820 | 0.800954 | 1.130896e-48 | -8.615850e-47 |
Msa0568680 | Msa1397120 | 0.802649 | 5.075016e-49 | -8.615850e-47 |
Msa0568680 | Msa1400120 | 0.809939 | 1.476539e-50 | -8.615850e-47 |
Msa0568680 | Msa1407190 | 0.827304 | 1.684987e-54 | -8.615850e-47 |
Msa0568680 | Msa1412130 | 0.800802 | 1.215056e-48 | -8.615850e-47 |
Msa0568680 | Msa1425260 | 0.809991 | 1.439176e-50 | -8.615850e-47 |
Msa0568680 | Msa1425880 | 0.821841 | 3.258081e-53 | -8.615850e-47 |
Msa0568680 | Msa1428780 | 0.825713 | 4.034703e-54 | -8.615850e-47 |
Msa0568680 | Msa1430550 | 0.816701 | 4.828048e-52 | -8.615850e-47 |
Msa0568680 | Msa1432130 | 0.835267 | 1.853696e-56 | -8.615850e-47 |
Msa0568680 | Msa1438520 | 0.822190 | 2.704759e-53 | -8.615850e-47 |
Msa0568680 | Msa1440310 | 0.809745 | 1.625445e-50 | -8.615850e-47 |
Msa0568680 | Msa1442790 | 0.802225 | 6.206419e-49 | -8.615850e-47 |
Msa0568680 | Msa1446780 | 0.819020 | 1.446130e-52 | -8.615850e-47 |
Msa0568680 | Msa1448560 | 0.804707 | 1.898018e-49 | -8.615850e-47 |
Msa0568680 | Msa1449520 | 0.807551 | 4.782642e-50 | -8.615850e-47 |
Msa0568680 | Msa1452710 | 0.856463 | 3.162225e-62 | -8.615850e-47 |
Msa0568680 | Msa1463900 | 0.841949 | 3.482735e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568680 | MtrunA17_Chr8g0383571 | 99.773 | 441 | 1 | 0 | 1 | 441 | 1 | 441 | 0.0 | 899 |
Msa0568680 | MtrunA17_Chr8g0383531 | 97.717 | 438 | 10 | 0 | 4 | 441 | 1 | 438 | 0.0 | 875 |
Msa0568680 | MtrunA17_Chr5g0431161 | 48.352 | 91 | 47 | 0 | 101 | 191 | 35 | 125 | 3.80e-15 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0568680 | AT5G09900.2 | 81.633 | 441 | 80 | 1 | 1 | 440 | 1 | 441 | 0.0 | 732 |
Msa0568680 | AT5G09900.1 | 81.179 | 441 | 82 | 1 | 1 | 440 | 1 | 441 | 0.0 | 728 |
Msa0568680 | AT5G64760.2 | 78.685 | 441 | 93 | 1 | 1 | 440 | 1 | 441 | 0.0 | 700 |
Msa0568680 | AT5G64760.1 | 78.458 | 441 | 94 | 1 | 1 | 440 | 1 | 441 | 0.0 | 697 |
Msa0568680 | AT5G64760.3 | 80.048 | 421 | 83 | 1 | 21 | 440 | 1 | 421 | 0.0 | 682 |
Msa0568680 | AT5G09900.3 | 79.070 | 344 | 71 | 1 | 1 | 343 | 1 | 344 | 0.0 | 548 |
Find 110 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACCTTCAAAGCTGCTTTA+TGG | 0.134030 | 4_1:-70299465 | None:intergenic |
AAACAACGATCTGATCATTT+AGG | 0.167639 | 4_1:-70295026 | None:intergenic |
TATTTGAGTATATGTAAATT+TGG | 0.193812 | 4_1:+70300086 | Msa0568680:three_prime_UTR |
GACCATATTATCACCTTCTT+TGG | 0.222140 | 4_1:-70296459 | None:intergenic |
GTGGTTGGTTGAGTGAAGTT+TGG | 0.229314 | 4_1:-70294742 | None:intergenic |
TGAAATTTGCCGCTGCTATA+AGG | 0.251024 | 4_1:+70298288 | Msa0568680:CDS |
TGGTTGGTTGAGTGAAGTTT+GGG | 0.272537 | 4_1:-70294741 | None:intergenic |
CATTGCTATCCTTTGCTGTT+TGG | 0.295822 | 4_1:-70299354 | None:intergenic |
AACAACGATCTGATCATTTA+GGG | 0.304111 | 4_1:-70295025 | None:intergenic |
CAAGAAACTTGCCAAGATTA+AGG | 0.314974 | 4_1:+70296006 | Msa0568680:CDS |
TCTTATCAGGTGGAAACTTT+TGG | 0.318210 | 4_1:+70296183 | Msa0568680:intron |
TCATCCAATGGACAGCTCTT+TGG | 0.322854 | 4_1:+70298719 | Msa0568680:CDS |
TGCCTCCTCAATATGTGATA+TGG | 0.330493 | 4_1:+70299665 | Msa0568680:three_prime_UTR |
CATCCAATGGACAGCTCTTT+GGG | 0.333432 | 4_1:+70298720 | Msa0568680:CDS |
CCCCTGTTCTTCCTTAATCT+TGG | 0.337481 | 4_1:-70296017 | None:intergenic |
ATACCTTACCACCGACTTAC+CGG | 0.339321 | 4_1:+70299874 | Msa0568680:three_prime_UTR |
ACCATATTATCACCTTCTTT+GGG | 0.346638 | 4_1:-70296458 | None:intergenic |
AGGATAACATACTGGAAGTT+TGG | 0.347252 | 4_1:-70298577 | None:intergenic |
GTTCTTCATATTCTTTCGTT+TGG | 0.365406 | 4_1:+70299949 | Msa0568680:three_prime_UTR |
TATGGACTGAAGTTGCCTTA+TGG | 0.366194 | 4_1:+70299683 | Msa0568680:three_prime_UTR |
ATGGACTGAAGTTGCCTTAT+GGG | 0.381336 | 4_1:+70299684 | Msa0568680:three_prime_UTR |
TAACTCATGGGCAGCAAACT+TGG | 0.387347 | 4_1:+70299384 | Msa0568680:CDS |
TGCCAAGATTAAGGAAGAAC+AGG | 0.388343 | 4_1:+70296015 | Msa0568680:CDS |
TTTATTACGAGCTAATGATT+AGG | 0.390801 | 4_1:+70296528 | Msa0568680:CDS |
ATTCGACATAGATGCATCTA+AGG | 0.393010 | 4_1:+70296424 | Msa0568680:CDS |
TAGATCAAACATTATCATAA+AGG | 0.400969 | 4_1:-70300048 | None:intergenic |
GCCCAAAGAAGGTGATAATA+TGG | 0.427248 | 4_1:+70296457 | Msa0568680:CDS |
TTCAAGATAATCATTGTTGT+GGG | 0.433017 | 4_1:-70298269 | None:intergenic |
GGTCCATAAAGCAGCTTTGA+AGG | 0.436788 | 4_1:+70299462 | Msa0568680:CDS |
TGAGAAGCATCTGTCTGATA+TGG | 0.444884 | 4_1:+70299276 | Msa0568680:CDS |
TCAATACGAGTTTCAATATC+CGG | 0.449985 | 4_1:-70295802 | None:intergenic |
ATGTTGAGATTGAGAGAGCT+AGG | 0.451064 | 4_1:+70295978 | Msa0568680:CDS |
GCATCTATGTCGAATACTCT+TGG | 0.459620 | 4_1:-70296416 | None:intergenic |
TTTCAAGATAATCATTGTTG+TGG | 0.472189 | 4_1:-70298270 | None:intergenic |
ATCTACCCTGAAACGCATAA+TGG | 0.475270 | 4_1:-70299774 | None:intergenic |
AACTACATACAAGACCGTTT+AGG | 0.477075 | 4_1:-70299904 | None:intergenic |
TATGGTTGTTACCAAGGCTC+TGG | 0.489637 | 4_1:+70299294 | Msa0568680:CDS |
TCGATTGTGCCTAGACCGCC+AGG | 0.490883 | 4_1:+70296355 | Msa0568680:CDS |
TTCGTTTCTGTAGGCAAACA+TGG | 0.492410 | 4_1:+70294870 | Msa0568680:intron |
TAGGATCTTGTCCGGTAAGT+CGG | 0.493217 | 4_1:-70299885 | None:intergenic |
ATCGAAGATTACCATGGTTG+TGG | 0.500341 | 4_1:-70294761 | None:intergenic |
ACGGTCTTGTATGTAGTTAG+TGG | 0.500674 | 4_1:+70299909 | Msa0568680:three_prime_UTR |
GGAGAAACTGCTTGATCTTG+TGG | 0.501917 | 4_1:+70299405 | Msa0568680:CDS |
CAAGGTGGAATTTAAAAGAC+TGG | 0.502902 | 4_1:-70298530 | None:intergenic |
TTTGACAATGAGATGGCCTC+TGG | 0.504799 | 4_1:+70298760 | Msa0568680:CDS |
AATCTTTGCAACCAGAGCCT+TGG | 0.507062 | 4_1:-70299305 | None:intergenic |
GCAAAGATTGACAGACCAAT+GGG | 0.508334 | 4_1:+70299319 | Msa0568680:CDS |
TTCAAATGAGCATCCCCATA+AGG | 0.512098 | 4_1:-70299698 | None:intergenic |
TTGTATCAAAATACTATGCA+AGG | 0.512334 | 4_1:+70298948 | Msa0568680:CDS |
GCAATGATGTACTTAACTCA+TGG | 0.517832 | 4_1:+70299371 | Msa0568680:CDS |
TTACCGGACAAGATCCTAAA+CGG | 0.522572 | 4_1:+70299890 | Msa0568680:three_prime_UTR |
ACATTGAACAGTGTATCTGC+TGG | 0.524074 | 4_1:+70295835 | Msa0568680:CDS |
GGACATAATCCTGGCGGTCT+AGG | 0.525396 | 4_1:-70296364 | None:intergenic |
GCAGCTTTGAAGGTTTAAGA+AGG | 0.527483 | 4_1:+70299472 | Msa0568680:exon |
TCTCCCAAAGAGCTGTCCAT+TGG | 0.527502 | 4_1:-70298723 | None:intergenic |
CAAAGCTGCTTTATGGACCA+TGG | 0.531327 | 4_1:-70299458 | None:intergenic |
ACGACGCGGTCAGCTCAAGC+AGG | 0.533278 | 4_1:+70295056 | Msa0568680:CDS |
TTTGTGCACGGACATAATCC+TGG | 0.535226 | 4_1:-70296373 | None:intergenic |
AGACCGTTTAGGATCTTGTC+CGG | 0.536612 | 4_1:-70299893 | None:intergenic |
GTCTGATATGGTTGTTACCA+AGG | 0.537128 | 4_1:+70299288 | Msa0568680:CDS |
TGTAACAGCTATGGTACAGC+AGG | 0.546142 | 4_1:+70295756 | Msa0568680:CDS |
TGAAATGTTGCTCACTGTGT+TGG | 0.548481 | 4_1:+70299717 | Msa0568680:three_prime_UTR |
AGTAGAGACGGAATATCTGC+AGG | 0.554698 | 4_1:-70296491 | None:intergenic |
CCTACAGGAATAAAATCAGC+AGG | 0.555937 | 4_1:-70298343 | None:intergenic |
TGGAAACAGACTATTCCCAT+TGG | 0.557174 | 4_1:-70299334 | None:intergenic |
TGAGATTGAGAGAGCTAGGT+TGG | 0.557330 | 4_1:+70295982 | Msa0568680:CDS |
TTCTTGAGAGTATTTGTGCA+CGG | 0.563823 | 4_1:-70296385 | None:intergenic |
TTTATTGTGCAAGTGCAGCT+TGG | 0.565928 | 4_1:+70300008 | Msa0568680:three_prime_UTR |
CATTGAACAGTGTATCTGCT+GGG | 0.568762 | 4_1:+70295836 | Msa0568680:CDS |
TGTCCGGTAAGTCGGTGGTA+AGG | 0.572093 | 4_1:-70299877 | None:intergenic |
TGCAAAGATTGACAGACCAA+TGG | 0.572504 | 4_1:+70299318 | Msa0568680:CDS |
GTTGGTTGAGTGAAGTTTGG+GGG | 0.574269 | 4_1:-70294739 | None:intergenic |
GAGGAAAATATGTTGGTGCT+TGG | 0.574826 | 4_1:+70298480 | Msa0568680:CDS |
GGTTGGTTGAGTGAAGTTTG+GGG | 0.576504 | 4_1:-70294740 | None:intergenic |
GAGAAACAAATGCGTCTCGC+CGG | 0.580321 | 4_1:+70294931 | Msa0568680:CDS |
CGTCTCGCCGGCGAAATAGT+CGG | 0.582458 | 4_1:+70294943 | Msa0568680:CDS |
ATCACAGGCTGTAACAGCTA+TGG | 0.585065 | 4_1:+70295747 | Msa0568680:intron |
CAATGATGTACTTAACTCAT+GGG | 0.587731 | 4_1:+70299372 | Msa0568680:CDS |
TCTAGTGCCGACTATTTCGC+CGG | 0.590784 | 4_1:-70294950 | None:intergenic |
TTTAAAAGACTGGACTGCAT+CGG | 0.598019 | 4_1:-70298520 | None:intergenic |
TGATTTGATGCAAGAAATTG+CGG | 0.598896 | 4_1:+70296057 | Msa0568680:CDS |
AGATCCTGAGGAAAATATGT+TGG | 0.600984 | 4_1:+70298473 | Msa0568680:intron |
AGATAGATTTCTATCCTCCA+AGG | 0.603704 | 4_1:-70298548 | None:intergenic |
TTTGAAGCAGCTGGTCACCA+TGG | 0.604172 | 4_1:+70298693 | Msa0568680:CDS |
TGTTTCAACTCTAGTAGAGA+CGG | 0.606167 | 4_1:-70296503 | None:intergenic |
CATATATTGCCTTATAGCAG+CGG | 0.613022 | 4_1:-70298297 | None:intergenic |
GCAATATATTGACGAGACAC+CGG | 0.613740 | 4_1:+70295783 | Msa0568680:CDS |
AAGATTACCATGGTTGTGGT+TGG | 0.614101 | 4_1:-70294757 | None:intergenic |
TCAGTCCATATCACATATTG+AGG | 0.615157 | 4_1:-70299670 | None:intergenic |
AGGTGATAATATGGTCGAAG+AGG | 0.618539 | 4_1:+70296466 | Msa0568680:CDS |
GAACGAGTTTGACAATGAGA+TGG | 0.619618 | 4_1:+70298753 | Msa0568680:CDS |
CACTCAACCAACCACAACCA+TGG | 0.619704 | 4_1:+70294750 | Msa0568680:exon |
GCCAAGATTAAGGAAGAACA+GGG | 0.626902 | 4_1:+70296016 | Msa0568680:CDS |
GTTCTTGCATACAGATCCTG+AGG | 0.628194 | 4_1:+70298461 | Msa0568680:intron |
AATTTCTTGCATCAAATCAG+CGG | 0.629438 | 4_1:-70296053 | None:intergenic |
TCACCATGGAAGTCATCCAA+TGG | 0.630891 | 4_1:+70298707 | Msa0568680:CDS |
GAACAGTGTATCTGCTGGGA+AGG | 0.631990 | 4_1:+70295840 | Msa0568680:CDS |
AGTCTGTTTCCAAACAGCAA+AGG | 0.634017 | 4_1:+70299345 | Msa0568680:CDS |
CTGGACTGCATCGGTGAATG+TGG | 0.634478 | 4_1:-70298511 | None:intergenic |
GTCCATATCACATATTGAGG+AGG | 0.639905 | 4_1:-70299667 | None:intergenic |
TCAAATACACAAGGAAACCA+TGG | 0.640379 | 4_1:+70299441 | Msa0568680:CDS |
TGGACTGAAGTTGCCTTATG+GGG | 0.647179 | 4_1:+70299685 | Msa0568680:three_prime_UTR |
AGAACAGGGGCTCATAGCTG+AGG | 0.659386 | 4_1:+70296030 | Msa0568680:CDS |
GATCTTGTCCGGTAAGTCGG+TGG | 0.660906 | 4_1:-70299882 | None:intergenic |
TGTTGCTCACTGTGTTGGTG+AGG | 0.668735 | 4_1:+70299722 | Msa0568680:three_prime_UTR |
GAGCTGTCATCAAATACACA+AGG | 0.670564 | 4_1:+70299432 | Msa0568680:CDS |
TAGATTTCTATCCTCCAAGG+TGG | 0.684299 | 4_1:-70298545 | None:intergenic |
TGTCCATTGGATGACTTCCA+TGG | 0.689019 | 4_1:-70298710 | None:intergenic |
CCAAGATTAAGGAAGAACAG+GGG | 0.758007 | 4_1:+70296017 | Msa0568680:CDS |
GTGCACGGACATAATCCTGG+CGG | 0.759607 | 4_1:-70296370 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTGAAAATGATTTAATTTT+TGG | - | chr4_1:70297916-70297935 | None:intergenic | 10.0% |
!! | TAAATTTATTTATTTGTGTT+TGG | + | chr4_1:70297969-70297988 | Msa0568680:intron | 10.0% |
!! | AAATTTATTTATTTGTGTTT+GGG | + | chr4_1:70297970-70297989 | Msa0568680:intron | 10.0% |
!!! | TAAAAAAATAAAAAAGTGTA+AGG | - | chr4_1:70298856-70298875 | None:intergenic | 10.0% |
!!! | TTAGTTTATTTCTTTTTTAA+AGG | + | chr4_1:70299214-70299233 | Msa0568680:intron | 10.0% |
!!! | TAGTTTATTTCTTTTTTAAA+GGG | + | chr4_1:70299215-70299234 | Msa0568680:intron | 10.0% |
!! | AAGTTCATAAAATTACTAAT+AGG | - | chr4_1:70295285-70295304 | None:intergenic | 15.0% |
!! | AATTATACAACAACAATATA+TGG | - | chr4_1:70295671-70295690 | None:intergenic | 15.0% |
!! | AAAAACAATAAAAATACAGA+AGG | - | chr4_1:70296110-70296129 | None:intergenic | 15.0% |
!!! | TTCTGTATTTTTATTGTTTT+TGG | + | chr4_1:70296109-70296128 | Msa0568680:intron | 15.0% |
!! | GTTAATATTTAAAAACTTGT+TGG | - | chr4_1:70297103-70297122 | None:intergenic | 15.0% |
!! | AAAAAAGAAATAAACTAAGA+TGG | - | chr4_1:70299212-70299231 | None:intergenic | 15.0% |
!!! | AGTTTATTTCTTTTTTAAAG+GGG | + | chr4_1:70299216-70299235 | Msa0568680:intron | 15.0% |
!! | AATATTACTTCAGAAATAAA+TGG | - | chr4_1:70299598-70299617 | None:intergenic | 15.0% |
!! | TATTTGAGTATATGTAAATT+TGG | + | chr4_1:70300086-70300105 | Msa0568680:three_prime_UTR | 15.0% |
!! | TTTCAATTGTAGATTTCTTA+TGG | + | chr4_1:70295180-70295199 | Msa0568680:intron | 20.0% |
!! | AATAAGTTGTTTATCCAAAA+AGG | - | chr4_1:70295386-70295405 | None:intergenic | 20.0% |
!!! | CTTAATTAAGTTTTATCTGT+AGG | + | chr4_1:70295454-70295473 | Msa0568680:intron | 20.0% |
!!! | AAAACATATGTCCTTTAAAA+TGG | - | chr4_1:70295924-70295943 | None:intergenic | 20.0% |
!! | AACTTATATCATTAGTAACA+AGG | - | chr4_1:70297187-70297206 | None:intergenic | 20.0% |
!!! | AAGTTCAAACTCATTTTATA+TGG | - | chr4_1:70297551-70297570 | None:intergenic | 20.0% |
!!! | ATTTTTAAGAACAGTATCAA+TGG | - | chr4_1:70297636-70297655 | None:intergenic | 20.0% |
!!! | ATTTTTTTTTTTCCTTATGC+TGG | + | chr4_1:70298218-70298237 | Msa0568680:intron | 20.0% |
!! | TACTATAAGATTCTGTTATA+CGG | + | chr4_1:70298400-70298419 | Msa0568680:intron | 20.0% |
!! | ATATTTGAACATGATTAGAA+AGG | - | chr4_1:70298619-70298638 | None:intergenic | 20.0% |
!!! | ATAAAAAAGTGTAAGGAATT+CGG | - | chr4_1:70298849-70298868 | None:intergenic | 20.0% |
!!! | AGTATGTAATTTTTGAAGAA+TGG | + | chr4_1:70299561-70299580 | Msa0568680:intron | 20.0% |
!! | TTAATCATAATGCTTATTTC+TGG | + | chr4_1:70299632-70299651 | Msa0568680:intron | 20.0% |
!! | TGCACAATAAAATTAAAAAG+TGG | - | chr4_1:70299999-70300018 | None:intergenic | 20.0% |
!! | TAGATCAAACATTATCATAA+AGG | - | chr4_1:70300051-70300070 | None:intergenic | 20.0% |
! | AACGAATTGAAAAGCAATTA+TGG | - | chr4_1:70294856-70294875 | None:intergenic | 25.0% |
!!! | TTGGGTTTTATTTAATCGAT+TGG | + | chr4_1:70295114-70295133 | Msa0568680:intron | 25.0% |
!!! | GTTTTATTTAATCGATTGGT+AGG | + | chr4_1:70295118-70295137 | Msa0568680:intron | 25.0% |
! | GAGAAGATAATAAAACAGAA+TGG | - | chr4_1:70295889-70295908 | None:intergenic | 25.0% |
!! | CTTAGCATTATCCATTTTAA+AGG | + | chr4_1:70295910-70295929 | Msa0568680:intron | 25.0% |
! | ACACAATACAACATACAAAT+TGG | - | chr4_1:70295948-70295967 | None:intergenic | 25.0% |
!! | TTTCTAGTAAGTTACTGATT+TGG | + | chr4_1:70296305-70296324 | Msa0568680:intron | 25.0% |
!!! | TTCTAGTAAGTTACTGATTT+GGG | + | chr4_1:70296306-70296325 | Msa0568680:intron | 25.0% |
! | TCTTCTACGTTAAATTGTTT+AGG | + | chr4_1:70296331-70296350 | Msa0568680:intron | 25.0% |
! | TTTATTACGAGCTAATGATT+AGG | + | chr4_1:70296528-70296547 | Msa0568680:CDS | 25.0% |
!! | ATGTCCTATACTGTTAATTT+TGG | + | chr4_1:70296793-70296812 | Msa0568680:intron | 25.0% |
! | GATTCCAAAATTAACAGTAT+AGG | - | chr4_1:70296800-70296819 | None:intergenic | 25.0% |
!!! | ATTTTGGAATCTGAAAGATA+AGG | + | chr4_1:70296809-70296828 | Msa0568680:intron | 25.0% |
! | CAAATATAAATAACTGCAGT+CGG | - | chr4_1:70296857-70296876 | None:intergenic | 25.0% |
! | AATTTGAGTAAACACAAACA+AGG | - | chr4_1:70296918-70296937 | None:intergenic | 25.0% |
!! | ATCCTTTTTATCTATATCTG+TGG | + | chr4_1:70296993-70297012 | Msa0568680:intron | 25.0% |
!! | TCCTTTTTATCTATATCTGT+GGG | + | chr4_1:70296994-70297013 | Msa0568680:intron | 25.0% |
!!! | TGTTTTAATTCTTAGCTTGA+TGG | + | chr4_1:70297123-70297142 | Msa0568680:intron | 25.0% |
!!! | GTTAACTTGTACTGTATTTA+TGG | + | chr4_1:70297259-70297278 | Msa0568680:intron | 25.0% |
!!! | AACTTTGGAAATTTTGGAAT+TGG | - | chr4_1:70297443-70297462 | None:intergenic | 25.0% |
! | TTTCAGAATAGTTAAGAACT+GGG | - | chr4_1:70297505-70297524 | None:intergenic | 25.0% |
!!! | TATTCTGAAACAAAGCATTA+TGG | + | chr4_1:70297515-70297534 | Msa0568680:intron | 25.0% |
! | TCATTTGAATTATGTGTGAA+AGG | + | chr4_1:70297785-70297804 | Msa0568680:intron | 25.0% |
! | TTCAAGATAATCATTGTTGT+GGG | - | chr4_1:70298272-70298291 | None:intergenic | 25.0% |
! | TTTCAAGATAATCATTGTTG+TGG | - | chr4_1:70298273-70298292 | None:intergenic | 25.0% |
! | TTGTATCAAAATACTATGCA+AGG | + | chr4_1:70298948-70298967 | Msa0568680:CDS | 25.0% |
!!! | GCTATAGTAACTTTTTCTTA+TGG | + | chr4_1:70299054-70299073 | Msa0568680:intron | 25.0% |
! | AAGAAATAAACTAAGATGGA+AGG | - | chr4_1:70299208-70299227 | None:intergenic | 25.0% |
! | TTATGCAAGAGTAATTGATT+AGG | - | chr4_1:70299246-70299265 | None:intergenic | 25.0% |
AACAACGATCTGATCATTTA+GGG | - | chr4_1:70295028-70295047 | None:intergenic | 30.0% | |
AAACAACGATCTGATCATTT+AGG | - | chr4_1:70295029-70295048 | None:intergenic | 30.0% | |
! | AAATTGATGCGTTTTGTGTT+AGG | + | chr4_1:70295089-70295108 | Msa0568680:intron | 30.0% |
! | AATTGATGCGTTTTGTGTTA+GGG | + | chr4_1:70295090-70295109 | Msa0568680:intron | 30.0% |
TTTAATCGATTGGTAGGTTT+AGG | + | chr4_1:70295124-70295143 | Msa0568680:intron | 30.0% | |
TTAATCGATTGGTAGGTTTA+GGG | + | chr4_1:70295125-70295144 | Msa0568680:intron | 30.0% | |
! | TGTGTAGTTAGAAAGAGTTT+TGG | + | chr4_1:70295219-70295238 | Msa0568680:intron | 30.0% |
! | GTGTAGTTAGAAAGAGTTTT+GGG | + | chr4_1:70295220-70295239 | Msa0568680:intron | 30.0% |
!! | GATTACGTTTTAGACTTCAA+AGG | + | chr4_1:70295242-70295261 | Msa0568680:intron | 30.0% |
!! | GTTGTTTTCATATGCTATCT+TGG | + | chr4_1:70295519-70295538 | Msa0568680:intron | 30.0% |
!! | TGTCATAAGCTGTTTTCATA+AGG | + | chr4_1:70295581-70295600 | Msa0568680:intron | 30.0% |
!! | TAAGTTTTGTGAGACTGTAT+GGG | - | chr4_1:70295610-70295629 | None:intergenic | 30.0% |
!! | ATAAGTTTTGTGAGACTGTA+TGG | - | chr4_1:70295611-70295630 | None:intergenic | 30.0% |
TTAAATAAGCCAATCCAAAC+AGG | + | chr4_1:70295645-70295664 | Msa0568680:intron | 30.0% | |
! | GTGAGAATCGTGATATTTTA+CGG | + | chr4_1:70295701-70295720 | Msa0568680:intron | 30.0% |
TCAATACGAGTTTCAATATC+CGG | - | chr4_1:70295805-70295824 | None:intergenic | 30.0% | |
AATTTCTTGCATCAAATCAG+CGG | - | chr4_1:70296056-70296075 | None:intergenic | 30.0% | |
TGATTTGATGCAAGAAATTG+CGG | + | chr4_1:70296057-70296076 | Msa0568680:CDS | 30.0% | |
ATGTAATGTGCAATCTTATC+AGG | + | chr4_1:70296170-70296189 | Msa0568680:intron | 30.0% | |
TTAGTGATGACAGAAATAGT+AGG | + | chr4_1:70296266-70296285 | Msa0568680:intron | 30.0% | |
ACCATATTATCACCTTCTTT+GGG | - | chr4_1:70296461-70296480 | None:intergenic | 30.0% | |
!! | TTCAGTTTCATTCACTTTTG+AGG | + | chr4_1:70296709-70296728 | Msa0568680:intron | 30.0% |
!! | TTCATTCACTTTTGAGGATA+TGG | + | chr4_1:70296715-70296734 | Msa0568680:intron | 30.0% |
TCCCACAGATATAGATAAAA+AGG | - | chr4_1:70296998-70297017 | None:intergenic | 30.0% | |
!! | CTATGATTTGTTTCTATGCT+TGG | + | chr4_1:70297018-70297037 | Msa0568680:intron | 30.0% |
CCTAAGAAACTTAGATCATT+AGG | - | chr4_1:70297237-70297256 | None:intergenic | 30.0% | |
CCTAATGATCTAAGTTTCTT+AGG | + | chr4_1:70297234-70297253 | Msa0568680:intron | 30.0% | |
! | TATTTATGGATTGCTAGAGT+TGG | + | chr4_1:70297273-70297292 | Msa0568680:intron | 30.0% |
TGGAATTGGAAAGAAAACAA+GGG | - | chr4_1:70297429-70297448 | None:intergenic | 30.0% | |
TTGGAATTGGAAAGAAAACA+AGG | - | chr4_1:70297430-70297449 | None:intergenic | 30.0% | |
!! | AGGGATAACTTTGGAAATTT+TGG | - | chr4_1:70297449-70297468 | None:intergenic | 30.0% |
GTTTCAGAATAGTTAAGAAC+TGG | - | chr4_1:70297506-70297525 | None:intergenic | 30.0% | |
AGTATCAATGGTAAAAGACA+AGG | - | chr4_1:70297624-70297643 | None:intergenic | 30.0% | |
AGCAGCATAAATATAAACGA+CGG | - | chr4_1:70297748-70297767 | None:intergenic | 30.0% | |
CACACATAATTCAAATGAAC+AGG | - | chr4_1:70297783-70297802 | None:intergenic | 30.0% | |
!! | AATTGTTGTTTGTCTACTGT+TGG | + | chr4_1:70297862-70297881 | Msa0568680:intron | 30.0% |
AAGTAAAGAATTGATCACAG+TGG | + | chr4_1:70298030-70298049 | Msa0568680:intron | 30.0% | |
!! | CTACATATTTTTCTAGTACC+TGG | + | chr4_1:70298167-70298186 | Msa0568680:intron | 30.0% |
AGTAAGAAATATCATGAACC+AGG | - | chr4_1:70298188-70298207 | None:intergenic | 30.0% | |
CTGTATGCAAGAACAATATT+TGG | - | chr4_1:70298455-70298474 | None:intergenic | 30.0% | |
! | TGTTTAGAATTCCTTGTCAT+TGG | + | chr4_1:70298641-70298660 | Msa0568680:intron | 30.0% |
! | TACAACAAGAATGTTCTGAA+AGG | - | chr4_1:70298933-70298952 | None:intergenic | 30.0% |
!! | TAACTTTTTCTTATGGTGTG+TGG | + | chr4_1:70299061-70299080 | Msa0568680:intron | 30.0% |
!! | AACTTTTTCTTATGGTGTGT+GGG | + | chr4_1:70299062-70299081 | Msa0568680:intron | 30.0% |
! | CAACATCTATTTTCACATTC+AGG | - | chr4_1:70299163-70299182 | None:intergenic | 30.0% |
CAATTACTCTTGCATAATTC+AGG | + | chr4_1:70299249-70299268 | Msa0568680:intron | 30.0% | |
CAATGATGTACTTAACTCAT+GGG | + | chr4_1:70299372-70299391 | Msa0568680:CDS | 30.0% | |
ACAGTGAGAAAATTTGAGAA+AGG | - | chr4_1:70299516-70299535 | None:intergenic | 30.0% | |
GTTCTTCATATTCTTTCGTT+TGG | + | chr4_1:70299949-70299968 | Msa0568680:three_prime_UTR | 30.0% | |
! | GCTTTTCAATTCGTTTCTGT+AGG | + | chr4_1:70294861-70294880 | Msa0568680:intron | 35.0% |
!! | ATTTAGGGTTTTCCATGCTT+TGG | - | chr4_1:70295013-70295032 | None:intergenic | 35.0% |
! | TTTGGTTCGCTTGAAACTAT+CGG | + | chr4_1:70295149-70295168 | Msa0568680:intron | 35.0% |
ACTGTTCAGTTCAGATACTA+TGG | + | chr4_1:70295359-70295378 | Msa0568680:intron | 35.0% | |
! | TCAGATACTATGGTCCTTTT+TGG | + | chr4_1:70295369-70295388 | Msa0568680:intron | 35.0% |
AATATATGGCCTGTTTGGAT+TGG | - | chr4_1:70295657-70295676 | None:intergenic | 35.0% | |
ACAACAATATATGGCCTGTT+TGG | - | chr4_1:70295662-70295681 | None:intergenic | 35.0% | |
AGCCTACTATATACTATCAC+AGG | + | chr4_1:70295732-70295751 | Msa0568680:intron | 35.0% | |
AGCCTGTGATAGTATATAGT+AGG | - | chr4_1:70295737-70295756 | None:intergenic | 35.0% | |
CAAGAAACTTGCCAAGATTA+AGG | + | chr4_1:70296006-70296025 | Msa0568680:CDS | 35.0% | |
TAATGTGCAATCTTATCAGG+TGG | + | chr4_1:70296173-70296192 | Msa0568680:intron | 35.0% | |
! | TCTTATCAGGTGGAAACTTT+TGG | + | chr4_1:70296183-70296202 | Msa0568680:intron | 35.0% |
!! | TTCTTGAGAGTATTTGTGCA+CGG | - | chr4_1:70296388-70296407 | None:intergenic | 35.0% |
ATTCGACATAGATGCATCTA+AGG | + | chr4_1:70296424-70296443 | Msa0568680:CDS | 35.0% | |
GAAAAGAAAAAGCCCAAAGA+AGG | + | chr4_1:70296446-70296465 | Msa0568680:CDS | 35.0% | |
GACCATATTATCACCTTCTT+TGG | - | chr4_1:70296462-70296481 | None:intergenic | 35.0% | |
TGTTTCAACTCTAGTAGAGA+CGG | - | chr4_1:70296506-70296525 | None:intergenic | 35.0% | |
AAGAAATACTACAACGAAGC+AGG | - | chr4_1:70296571-70296590 | None:intergenic | 35.0% | |
GTAGATACTCTAAATTGTCC+TGG | + | chr4_1:70296675-70296694 | Msa0568680:intron | 35.0% | |
!!! | TGAGGATATGGTTTTGATGT+TGG | + | chr4_1:70296727-70296746 | Msa0568680:intron | 35.0% |
GACATTAATGCATCACTGTT+AGG | - | chr4_1:70296778-70296797 | None:intergenic | 35.0% | |
!! | TTGTTTCTATGCTTGGCATT+TGG | + | chr4_1:70297025-70297044 | Msa0568680:intron | 35.0% |
AGAAATGTGTGCAGAAGAAT+TGG | - | chr4_1:70297396-70297415 | None:intergenic | 35.0% | |
GATGAAAAGTAGGGATGAAA+GGG | - | chr4_1:70297468-70297487 | None:intergenic | 35.0% | |
AGATGAAAAGTAGGGATGAA+AGG | - | chr4_1:70297469-70297488 | None:intergenic | 35.0% | |
GCAGACAAAGATGAAAAGTA+GGG | - | chr4_1:70297477-70297496 | None:intergenic | 35.0% | |
AGCAGACAAAGATGAAAAGT+AGG | - | chr4_1:70297478-70297497 | None:intergenic | 35.0% | |
AAGGAATCCAAATGTTAGGA+AGG | - | chr4_1:70297605-70297624 | None:intergenic | 35.0% | |
AGACAAGGAATCCAAATGTT+AGG | - | chr4_1:70297609-70297628 | None:intergenic | 35.0% | |
!! | AAACGACGGTTGATAAGAAT+TGG | - | chr4_1:70297734-70297753 | None:intergenic | 35.0% |
AAAACATGTTGCAAGAGTGA+AGG | - | chr4_1:70297891-70297910 | None:intergenic | 35.0% | |
ACCCAAGTTTAGAAAGCTAT+GGG | - | chr4_1:70298077-70298096 | None:intergenic | 35.0% | |
AACCCAAGTTTAGAAAGCTA+TGG | - | chr4_1:70298078-70298097 | None:intergenic | 35.0% | |
! | GGTTTTCTGTCTGTGATTTT+AGG | + | chr4_1:70298239-70298258 | Msa0568680:intron | 35.0% |
CATATATTGCCTTATAGCAG+CGG | - | chr4_1:70298300-70298319 | None:intergenic | 35.0% | |
! | ATCAGCAGGATTTTCTTTGA+TGG | - | chr4_1:70298332-70298351 | None:intergenic | 35.0% |
AAAGAGAATAGAAAGCCTAC+AGG | - | chr4_1:70298361-70298380 | None:intergenic | 35.0% | |
AGATCCTGAGGAAAATATGT+TGG | + | chr4_1:70298473-70298492 | Msa0568680:intron | 35.0% | |
TTTAAAAGACTGGACTGCAT+CGG | - | chr4_1:70298523-70298542 | None:intergenic | 35.0% | |
CAAGGTGGAATTTAAAAGAC+TGG | - | chr4_1:70298533-70298552 | None:intergenic | 35.0% | |
! | CAGTCTTTTAAATTCCACCT+TGG | + | chr4_1:70298531-70298550 | Msa0568680:CDS | 35.0% |
! | TCTTTTAAATTCCACCTTGG+AGG | + | chr4_1:70298534-70298553 | Msa0568680:CDS | 35.0% |
AGATAGATTTCTATCCTCCA+AGG | - | chr4_1:70298551-70298570 | None:intergenic | 35.0% | |
AGGATAACATACTGGAAGTT+TGG | - | chr4_1:70298580-70298599 | None:intergenic | 35.0% | |
TGAGAGATAGGATAACATAC+TGG | - | chr4_1:70298588-70298607 | None:intergenic | 35.0% | |
TTCACTCAAAAACTTTCCAG+AGG | - | chr4_1:70298779-70298798 | None:intergenic | 35.0% | |
!! | ACTTTTTCTTATGGTGTGTG+GGG | + | chr4_1:70299063-70299082 | Msa0568680:intron | 35.0% |
TTCGTGGAAAACTATATCCT+TGG | + | chr4_1:70299087-70299106 | Msa0568680:intron | 35.0% | |
ACTATATCCTTGGAAAGTGA+AGG | + | chr4_1:70299097-70299116 | Msa0568680:intron | 35.0% | |
GTAAACCTTTAACTACCTAC+TGG | + | chr4_1:70299182-70299201 | Msa0568680:intron | 35.0% | |
GCAATGATGTACTTAACTCA+TGG | + | chr4_1:70299371-70299390 | Msa0568680:CDS | 35.0% | |
TCAAATACACAAGGAAACCA+TGG | + | chr4_1:70299441-70299460 | Msa0568680:CDS | 35.0% | |
! | AAACCTTCAAAGCTGCTTTA+TGG | - | chr4_1:70299468-70299487 | None:intergenic | 35.0% |
! | CTTTGAAGGTTTAAGAAGGT+AGG | + | chr4_1:70299476-70299495 | Msa0568680:intron | 35.0% |
AAGAAGGTAGGTCCATATAT+CGG | + | chr4_1:70299488-70299507 | Msa0568680:intron | 35.0% | |
!! | TGCTTATTTCTGGTCATTTC+AGG | + | chr4_1:70299642-70299661 | Msa0568680:intron | 35.0% |
TCAGTCCATATCACATATTG+AGG | - | chr4_1:70299673-70299692 | None:intergenic | 35.0% | |
! | ATTTTGCCATTATGCGTTTC+AGG | + | chr4_1:70299768-70299787 | Msa0568680:three_prime_UTR | 35.0% |
! | TTTTGCCATTATGCGTTTCA+GGG | + | chr4_1:70299769-70299788 | Msa0568680:three_prime_UTR | 35.0% |
AACTACATACAAGACCGTTT+AGG | - | chr4_1:70299907-70299926 | None:intergenic | 35.0% | |
! | TGGTTGGTTGAGTGAAGTTT+GGG | - | chr4_1:70294744-70294763 | None:intergenic | 40.0% |
AAGATTACCATGGTTGTGGT+TGG | - | chr4_1:70294760-70294779 | None:intergenic | 40.0% | |
ATCGAAGATTACCATGGTTG+TGG | - | chr4_1:70294764-70294783 | None:intergenic | 40.0% | |
GAATCGATCGAAGATTACCA+TGG | - | chr4_1:70294770-70294789 | None:intergenic | 40.0% | |
AAAACGATTGCGATGAACCA+TGG | - | chr4_1:70294797-70294816 | None:intergenic | 40.0% | |
GGCGTGAGATTAATAGTGAA+GGG | - | chr4_1:70294835-70294854 | None:intergenic | 40.0% | |
TGGCGTGAGATTAATAGTGA+AGG | - | chr4_1:70294836-70294855 | None:intergenic | 40.0% | |
TTCGTTTCTGTAGGCAAACA+TGG | + | chr4_1:70294870-70294889 | Msa0568680:intron | 40.0% | |
!!! | TCTGTTTTGAAGCCAAAGCA+TGG | + | chr4_1:70294998-70295017 | Msa0568680:CDS | 40.0% |
!! | GTTGTTTTGTCTAAACGACG+CGG | + | chr4_1:70295042-70295061 | Msa0568680:CDS | 40.0% |
! | ATGCGTTTTGTGTTAGGGTT+TGG | + | chr4_1:70295095-70295114 | Msa0568680:intron | 40.0% |
! | TGCGTTTTGTGTTAGGGTTT+GGG | + | chr4_1:70295096-70295115 | Msa0568680:intron | 40.0% |
!! | GATTGGTAGGTTTAGGGTTT+TGG | + | chr4_1:70295131-70295150 | Msa0568680:intron | 40.0% |
CAGCTTATGACACTTCTCAT+AGG | - | chr4_1:70295573-70295592 | None:intergenic | 40.0% | |
GCAATATATTGACGAGACAC+CGG | + | chr4_1:70295783-70295802 | Msa0568680:CDS | 40.0% | |
ACATTGAACAGTGTATCTGC+TGG | + | chr4_1:70295835-70295854 | Msa0568680:CDS | 40.0% | |
CATTGAACAGTGTATCTGCT+GGG | + | chr4_1:70295836-70295855 | Msa0568680:CDS | 40.0% | |
ATGTTGAGATTGAGAGAGCT+AGG | + | chr4_1:70295978-70295997 | Msa0568680:CDS | 40.0% | |
TGCCAAGATTAAGGAAGAAC+AGG | + | chr4_1:70296015-70296034 | Msa0568680:CDS | 40.0% | |
GCCAAGATTAAGGAAGAACA+GGG | + | chr4_1:70296016-70296035 | Msa0568680:CDS | 40.0% | |
CCAAGATTAAGGAAGAACAG+GGG | + | chr4_1:70296017-70296036 | Msa0568680:CDS | 40.0% | |
GCATCTATGTCGAATACTCT+TGG | - | chr4_1:70296419-70296438 | None:intergenic | 40.0% | |
GCCCAAAGAAGGTGATAATA+TGG | + | chr4_1:70296457-70296476 | Msa0568680:CDS | 40.0% | |
AGGTGATAATATGGTCGAAG+AGG | + | chr4_1:70296466-70296485 | Msa0568680:CDS | 40.0% | |
CCACAGTACTTGTAACTACA+AGG | - | chr4_1:70296601-70296620 | None:intergenic | 40.0% | |
! | CCTTGTAGTTACAAGTACTG+TGG | + | chr4_1:70296598-70296617 | Msa0568680:intron | 40.0% |
AACTGAAAACGCAGAAAACC+AGG | - | chr4_1:70296696-70296715 | None:intergenic | 40.0% | |
! | TTATGGATTGCTAGAGTTGG+TGG | + | chr4_1:70297276-70297295 | Msa0568680:intron | 40.0% |
AAAGTGCACAATTACAGTGC+AGG | - | chr4_1:70297356-70297375 | None:intergenic | 40.0% | |
! | GCACTGTAATTGTGCACTTT+TGG | + | chr4_1:70297356-70297375 | Msa0568680:intron | 40.0% |
AGGGATGAAAGGGATAACTT+TGG | - | chr4_1:70297458-70297477 | None:intergenic | 40.0% | |
! | TTTAGAGCTGTCAAACTCTC+TGG | + | chr4_1:70297569-70297588 | Msa0568680:intron | 40.0% |
TGGTCATCCTTCCTAACATT+TGG | + | chr4_1:70297595-70297614 | Msa0568680:intron | 40.0% | |
ATTATGTGTGAAAGGCAACC+AGG | + | chr4_1:70297793-70297812 | Msa0568680:intron | 40.0% | |
ACAAAACTCCTGTCATGACA+AGG | + | chr4_1:70297820-70297839 | Msa0568680:intron | 40.0% | |
TTCCTAAACCTTGTCATGAC+AGG | - | chr4_1:70297831-70297850 | None:intergenic | 40.0% | |
GTCATGACAAGGTTTAGGAA+AGG | + | chr4_1:70297831-70297850 | Msa0568680:intron | 40.0% | |
TGATCACAGTGGAGTATATG+TGG | + | chr4_1:70298041-70298060 | Msa0568680:intron | 40.0% | |
TCCCCATAGCTTTCTAAACT+TGG | + | chr4_1:70298072-70298091 | Msa0568680:intron | 40.0% | |
CCCAAGTTTAGAAAGCTATG+GGG | - | chr4_1:70298076-70298095 | None:intergenic | 40.0% | |
CCCCATAGCTTTCTAAACTT+GGG | + | chr4_1:70298073-70298092 | Msa0568680:intron | 40.0% | |
ACAGACAGAAAACCAGCATA+AGG | - | chr4_1:70298233-70298252 | None:intergenic | 40.0% | |
TGAAATTTGCCGCTGCTATA+AGG | + | chr4_1:70298288-70298307 | Msa0568680:CDS | 40.0% | |
! | GCAGGATTTTCTTTGATGGA+CGG | - | chr4_1:70298328-70298347 | None:intergenic | 40.0% |
CCTACAGGAATAAAATCAGC+AGG | - | chr4_1:70298346-70298365 | None:intergenic | 40.0% | |
!!! | CCTGCTGATTTTATTCCTGT+AGG | + | chr4_1:70298343-70298362 | Msa0568680:intron | 40.0% |
! | AGCACCAACATATTTTCCTC+AGG | - | chr4_1:70298480-70298499 | None:intergenic | 40.0% |
! | GAGGAAAATATGTTGGTGCT+TGG | + | chr4_1:70298480-70298499 | Msa0568680:CDS | 40.0% |
TAGATTTCTATCCTCCAAGG+TGG | - | chr4_1:70298548-70298567 | None:intergenic | 40.0% | |
AAGGATGAGAGATGAGAGAT+AGG | - | chr4_1:70298600-70298619 | None:intergenic | 40.0% | |
AACAGGTACAACCAATGACA+AGG | - | chr4_1:70298655-70298674 | None:intergenic | 40.0% | |
GAACGAGTTTGACAATGAGA+TGG | + | chr4_1:70298753-70298772 | Msa0568680:CDS | 40.0% | |
TACTAGCATTACACACCTCT+AGG | - | chr4_1:70299012-70299031 | None:intergenic | 40.0% | |
GAGGTGTGTAATGCTAGTAA+TGG | + | chr4_1:70299013-70299032 | Msa0568680:intron | 40.0% | |
ATATCCTTGGAAAGTGAAGG+TGG | + | chr4_1:70299100-70299119 | Msa0568680:intron | 40.0% | |
!! | TGAGAAGCATCTGTCTGATA+TGG | + | chr4_1:70299276-70299295 | Msa0568680:CDS | 40.0% |
GTCTGATATGGTTGTTACCA+AGG | + | chr4_1:70299288-70299307 | Msa0568680:CDS | 40.0% | |
TGCAAAGATTGACAGACCAA+TGG | + | chr4_1:70299318-70299337 | Msa0568680:CDS | 40.0% | |
GCAAAGATTGACAGACCAAT+GGG | + | chr4_1:70299319-70299338 | Msa0568680:CDS | 40.0% | |
TGGAAACAGACTATTCCCAT+TGG | - | chr4_1:70299337-70299356 | None:intergenic | 40.0% | |
AGTCTGTTTCCAAACAGCAA+AGG | + | chr4_1:70299345-70299364 | Msa0568680:CDS | 40.0% | |
!! | CATTGCTATCCTTTGCTGTT+TGG | - | chr4_1:70299357-70299376 | None:intergenic | 40.0% |
GAGCTGTCATCAAATACACA+AGG | + | chr4_1:70299432-70299451 | Msa0568680:CDS | 40.0% | |
!! | GCAGCTTTGAAGGTTTAAGA+AGG | + | chr4_1:70299472-70299491 | Msa0568680:exon | 40.0% |
TTGAGAAAGGAGCCGATATA+TGG | - | chr4_1:70299503-70299522 | None:intergenic | 40.0% | |
TGCCTCCTCAATATGTGATA+TGG | + | chr4_1:70299665-70299684 | Msa0568680:three_prime_UTR | 40.0% | |
GTCCATATCACATATTGAGG+AGG | - | chr4_1:70299670-70299689 | None:intergenic | 40.0% | |
! | TATGGACTGAAGTTGCCTTA+TGG | + | chr4_1:70299683-70299702 | Msa0568680:three_prime_UTR | 40.0% |
! | ATGGACTGAAGTTGCCTTAT+GGG | + | chr4_1:70299684-70299703 | Msa0568680:three_prime_UTR | 40.0% |
TTCAAATGAGCATCCCCATA+AGG | - | chr4_1:70299701-70299720 | None:intergenic | 40.0% | |
TGAAATGTTGCTCACTGTGT+TGG | + | chr4_1:70299717-70299736 | Msa0568680:three_prime_UTR | 40.0% | |
ATCTACCCTGAAACGCATAA+TGG | - | chr4_1:70299777-70299796 | None:intergenic | 40.0% | |
TTACCGGACAAGATCCTAAA+CGG | + | chr4_1:70299890-70299909 | Msa0568680:three_prime_UTR | 40.0% | |
! | ACGGTCTTGTATGTAGTTAG+TGG | + | chr4_1:70299909-70299928 | Msa0568680:three_prime_UTR | 40.0% |
TTTATTGTGCAAGTGCAGCT+TGG | + | chr4_1:70300008-70300027 | Msa0568680:three_prime_UTR | 40.0% | |
GAGAGAGAGAGAGAGATCTA+TGG | - | chr4_1:70294706-70294725 | None:intergenic | 45.0% | |
GTTGGTTGAGTGAAGTTTGG+GGG | - | chr4_1:70294742-70294761 | None:intergenic | 45.0% | |
! | GGTTGGTTGAGTGAAGTTTG+GGG | - | chr4_1:70294743-70294762 | None:intergenic | 45.0% |
! | GTGGTTGGTTGAGTGAAGTT+TGG | - | chr4_1:70294745-70294764 | None:intergenic | 45.0% |
! | CTTCGATCGATTCTCTTCCA+TGG | + | chr4_1:70294777-70294796 | Msa0568680:intron | 45.0% |
ATCACAGGCTGTAACAGCTA+TGG | + | chr4_1:70295747-70295766 | Msa0568680:intron | 45.0% | |
TGTAACAGCTATGGTACAGC+AGG | + | chr4_1:70295756-70295775 | Msa0568680:CDS | 45.0% | |
TGAGATTGAGAGAGCTAGGT+TGG | + | chr4_1:70295982-70296001 | Msa0568680:CDS | 45.0% | |
CCCCTGTTCTTCCTTAATCT+TGG | - | chr4_1:70296020-70296039 | None:intergenic | 45.0% | |
!! | GGTGGAAACTTTTGGTGCAA+TGG | + | chr4_1:70296191-70296210 | Msa0568680:intron | 45.0% |
TTTGTGCACGGACATAATCC+TGG | - | chr4_1:70296376-70296395 | None:intergenic | 45.0% | |
AGTAGAGACGGAATATCTGC+AGG | - | chr4_1:70296494-70296513 | None:intergenic | 45.0% | |
TGGTTCCATAGACGAAAGTG+CGG | + | chr4_1:70297045-70297064 | Msa0568680:intron | 45.0% | |
GCTGTCAAACTCTCTGGTTA+TGG | + | chr4_1:70297575-70297594 | Msa0568680:intron | 45.0% | |
CTCCTGTCATGACAAGGTTT+AGG | + | chr4_1:70297826-70297845 | Msa0568680:intron | 45.0% | |
CGATTTCACAGTCAGTGAAG+CGG | - | chr4_1:70298113-70298132 | None:intergenic | 45.0% | |
GTTCTTGCATACAGATCCTG+AGG | + | chr4_1:70298461-70298480 | Msa0568680:intron | 45.0% | |
TGTACCTGTTACACGTGTCT+AGG | + | chr4_1:70298665-70298684 | Msa0568680:intron | 45.0% | |
!!! | TAGGCTACTTTTGAAGCAGC+TGG | + | chr4_1:70298684-70298703 | Msa0568680:intron | 45.0% |
TCACCATGGAAGTCATCCAA+TGG | + | chr4_1:70298707-70298726 | Msa0568680:CDS | 45.0% | |
TGTCCATTGGATGACTTCCA+TGG | - | chr4_1:70298713-70298732 | None:intergenic | 45.0% | |
TCATCCAATGGACAGCTCTT+TGG | + | chr4_1:70298719-70298738 | Msa0568680:CDS | 45.0% | |
CATCCAATGGACAGCTCTTT+GGG | + | chr4_1:70298720-70298739 | Msa0568680:CDS | 45.0% | |
TTTGACAATGAGATGGCCTC+TGG | + | chr4_1:70298760-70298779 | Msa0568680:CDS | 45.0% | |
CTTGGAAAGTGAAGGTGGTA+GGG | + | chr4_1:70299105-70299124 | Msa0568680:intron | 45.0% | |
TTGGAAAGTGAAGGTGGTAG+GGG | + | chr4_1:70299106-70299125 | Msa0568680:intron | 45.0% | |
GAAGGCCAGTAGGTAGTTAA+AGG | - | chr4_1:70299190-70299209 | None:intergenic | 45.0% | |
AACTAAGATGGAAGGCCAGT+AGG | - | chr4_1:70299200-70299219 | None:intergenic | 45.0% | |
TATGGTTGTTACCAAGGCTC+TGG | + | chr4_1:70299294-70299313 | Msa0568680:CDS | 45.0% | |
AATCTTTGCAACCAGAGCCT+TGG | - | chr4_1:70299308-70299327 | None:intergenic | 45.0% | |
TAACTCATGGGCAGCAAACT+TGG | + | chr4_1:70299384-70299403 | Msa0568680:CDS | 45.0% | |
GGAGAAACTGCTTGATCTTG+TGG | + | chr4_1:70299405-70299424 | Msa0568680:CDS | 45.0% | |
! | CAAAGCTGCTTTATGGACCA+TGG | - | chr4_1:70299461-70299480 | None:intergenic | 45.0% |
! | GGTCCATAAAGCAGCTTTGA+AGG | + | chr4_1:70299462-70299481 | Msa0568680:CDS | 45.0% |
TGGACTGAAGTTGCCTTATG+GGG | + | chr4_1:70299685-70299704 | Msa0568680:three_prime_UTR | 45.0% | |
!! | ATACCTTACCACCGACTTAC+CGG | + | chr4_1:70299874-70299893 | Msa0568680:three_prime_UTR | 45.0% |
TAGGATCTTGTCCGGTAAGT+CGG | - | chr4_1:70299888-70299907 | None:intergenic | 45.0% | |
! | AGACCGTTTAGGATCTTGTC+CGG | - | chr4_1:70299896-70299915 | None:intergenic | 45.0% |
CACTCAACCAACCACAACCA+TGG | + | chr4_1:70294750-70294769 | Msa0568680:exon | 50.0% | |
GAGAAACAAATGCGTCTCGC+CGG | + | chr4_1:70294931-70294950 | Msa0568680:CDS | 50.0% | |
!! | TCTAGTGCCGACTATTTCGC+CGG | - | chr4_1:70294953-70294972 | None:intergenic | 50.0% |
GAACAGTGTATCTGCTGGGA+AGG | + | chr4_1:70295840-70295859 | Msa0568680:CDS | 50.0% | |
CCAATCCGCACTTTCGTCTA+TGG | - | chr4_1:70297053-70297072 | None:intergenic | 50.0% | |
! | CCATAGACGAAAGTGCGGAT+TGG | + | chr4_1:70297050-70297069 | Msa0568680:intron | 50.0% |
! | CGGATTGGAGTGCATGTTTG+TGG | + | chr4_1:70297065-70297084 | Msa0568680:intron | 50.0% |
GTAGCCTAGACACGTGTAAC+AGG | - | chr4_1:70298672-70298691 | None:intergenic | 50.0% | |
! | TTTGAAGCAGCTGGTCACCA+TGG | + | chr4_1:70298693-70298712 | Msa0568680:CDS | 50.0% |
TCTCCCAAAGAGCTGTCCAT+TGG | - | chr4_1:70298726-70298745 | None:intergenic | 50.0% | |
! | GCTTTTGTGTCTCAGCCTAG+AGG | + | chr4_1:70298994-70299013 | Msa0568680:CDS | 50.0% |
TTATGGTGTGTGGGGATTCG+TGG | + | chr4_1:70299071-70299090 | Msa0568680:intron | 50.0% | |
CCTACCACCTTCACTTTCCA+AGG | - | chr4_1:70299107-70299126 | None:intergenic | 50.0% | |
CCTTGGAAAGTGAAGGTGGT+AGG | + | chr4_1:70299104-70299123 | Msa0568680:intron | 50.0% | |
TGAAGGTGGTAGGGGAATTG+TGG | + | chr4_1:70299114-70299133 | Msa0568680:intron | 50.0% | |
! | TGTTGCTCACTGTGTTGGTG+AGG | + | chr4_1:70299722-70299741 | Msa0568680:three_prime_UTR | 50.0% |
AGAACAGGGGCTCATAGCTG+AGG | + | chr4_1:70296030-70296049 | Msa0568680:CDS | 55.0% | |
GGACATAATCCTGGCGGTCT+AGG | - | chr4_1:70296367-70296386 | None:intergenic | 55.0% | |
GTGCACGGACATAATCCTGG+CGG | - | chr4_1:70296373-70296392 | None:intergenic | 55.0% | |
GCAGTCGGACAGACAGTCAT+TGG | - | chr4_1:70296842-70296861 | None:intergenic | 55.0% | |
!! | GACAGGAGTTTTGTAGCGCC+TGG | - | chr4_1:70297814-70297833 | None:intergenic | 55.0% |
! | CTGGACTGCATCGGTGAATG+TGG | - | chr4_1:70298514-70298533 | None:intergenic | 55.0% |
TGTCCGGTAAGTCGGTGGTA+AGG | - | chr4_1:70299880-70299899 | None:intergenic | 55.0% | |
GATCTTGTCCGGTAAGTCGG+TGG | - | chr4_1:70299885-70299904 | None:intergenic | 55.0% | |
CGTCTCGCCGGCGAAATAGT+CGG | + | chr4_1:70294943-70294962 | Msa0568680:CDS | 60.0% | |
TCGATTGTGCCTAGACCGCC+AGG | + | chr4_1:70296355-70296374 | Msa0568680:CDS | 60.0% | |
ACGACGCGGTCAGCTCAAGC+AGG | + | chr4_1:70295056-70295075 | Msa0568680:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 70294685 | 70300122 | 70294685 | ID=Msa0568680;Name=Msa0568680 |
chr4_1 | mRNA | 70294685 | 70300122 | 70294685 | ID=Msa0568680-mRNA-1;Parent=Msa0568680;Name=Msa0568680-mRNA-1;_AED=0.07;_eAED=0.07;_QI=84|1|1|1|0.90|0.91|12|463|441 |
chr4_1 | exon | 70294685 | 70294771 | 70294685 | ID=Msa0568680-mRNA-1:exon:23681;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70294883 | 70295077 | 70294883 | ID=Msa0568680-mRNA-1:exon:23682;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70295754 | 70295861 | 70295754 | ID=Msa0568680-mRNA-1:exon:23683;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70295974 | 70296078 | 70295974 | ID=Msa0568680-mRNA-1:exon:23684;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70296192 | 70296248 | 70296192 | ID=Msa0568680-mRNA-1:exon:23685;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70296353 | 70296549 | 70296353 | ID=Msa0568680-mRNA-1:exon:23686;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70298261 | 70298360 | 70298261 | ID=Msa0568680-mRNA-1:exon:23687;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70298475 | 70298587 | 70298475 | ID=Msa0568680-mRNA-1:exon:23688;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70298687 | 70298837 | 70298687 | ID=Msa0568680-mRNA-1:exon:23689;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70298938 | 70299015 | 70298938 | ID=Msa0568680-mRNA-1:exon:23690;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70299271 | 70299493 | 70299271 | ID=Msa0568680-mRNA-1:exon:23691;Parent=Msa0568680-mRNA-1 |
chr4_1 | exon | 70299664 | 70300122 | 70299664 | ID=Msa0568680-mRNA-1:exon:23692;Parent=Msa0568680-mRNA-1 |
chr4_1 | five_prime_UTR | 70294685 | 70294768 | 70294685 | ID=Msa0568680-mRNA-1:five_prime_utr;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70294769 | 70294771 | 70294769 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70294883 | 70295077 | 70294883 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70295754 | 70295861 | 70295754 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70295974 | 70296078 | 70295974 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70296192 | 70296248 | 70296192 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70296353 | 70296549 | 70296353 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70298261 | 70298360 | 70298261 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70298475 | 70298587 | 70298475 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70298687 | 70298837 | 70298687 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70298938 | 70299015 | 70298938 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | CDS | 70299271 | 70299489 | 70299271 | ID=Msa0568680-mRNA-1:cds;Parent=Msa0568680-mRNA-1 |
chr4_1 | three_prime_UTR | 70299490 | 70299493 | 70299490 | ID=Msa0568680-mRNA-1:three_prime_utr;Parent=Msa0568680-mRNA-1 |
chr4_1 | three_prime_UTR | 70299664 | 70300122 | 70299664 | ID=Msa0568680-mRNA-1:three_prime_utr;Parent=Msa0568680-mRNA-1 |
Gene Sequence |
Protein sequence |